View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2622_high_61 (Length: 293)

Name: NF2622_high_61
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2622_high_61
NF2622_high_61
[»] chr2 (28 HSPs)
chr2 (63-275)||(5371167-5371379)
chr2 (71-273)||(18301195-18301397)
chr2 (99-275)||(12819443-12819619)
chr2 (70-275)||(20536937-20537143)
chr2 (71-233)||(6124399-6124561)
chr2 (71-233)||(4170259-4170416)
chr2 (71-233)||(22484478-22484641)
chr2 (73-233)||(6497409-6497563)
chr2 (99-233)||(40308582-40308715)
chr2 (71-179)||(16562022-16562130)
chr2 (71-149)||(22571163-22571241)
chr2 (74-156)||(33325046-33325128)
chr2 (74-156)||(38602133-38602215)
chr2 (90-179)||(7876946-7877035)
chr2 (235-275)||(14824381-14824421)
chr2 (229-275)||(4169822-4169868)
chr2 (229-275)||(6496973-6497019)
chr2 (229-275)||(22485039-22485085)
chr2 (229-275)||(40308138-40308184)
chr2 (229-275)||(6124943-6124989)
chr2 (229-275)||(7807157-7807203)
chr2 (229-275)||(10573752-10573798)
chr2 (229-275)||(31236000-31236046)
chr2 (229-275)||(34146438-34146484)
chr2 (233-274)||(45158991-45159032)
chr2 (231-275)||(2319535-2319579)
chr2 (243-275)||(24585785-24585817)
chr2 (235-275)||(44156840-44156880)
[»] chr3 (34 HSPs)
chr3 (63-275)||(22310935-22311147)
chr3 (71-275)||(28882380-28882584)
chr3 (70-270)||(50287052-50287251)
chr3 (73-267)||(35389965-35390159)
chr3 (99-275)||(52121404-52121579)
chr3 (71-233)||(48123036-48123199)
chr3 (71-233)||(10224895-10225057)
chr3 (71-233)||(28704949-28705111)
chr3 (71-233)||(52505567-52505729)
chr3 (71-233)||(1679442-1679604)
chr3 (71-233)||(42464677-42464839)
chr3 (89-218)||(25936819-25936948)
chr3 (71-179)||(53192701-53192809)
chr3 (71-156)||(45532805-45532890)
chr3 (229-275)||(22610577-22610623)
chr3 (229-275)||(25936379-25936425)
chr3 (229-275)||(30787375-30787421)
chr3 (229-275)||(1528805-1528851)
chr3 (233-275)||(13353009-13353051)
chr3 (229-275)||(37996591-37996637)
chr3 (229-275)||(52505124-52505170)
chr3 (229-275)||(1678981-1679027)
chr3 (229-275)||(7327996-7328042)
chr3 (229-275)||(19421674-19421720)
chr3 (233-275)||(21006177-21006219)
chr3 (229-275)||(21157542-21157588)
chr3 (229-275)||(38888899-38888945)
chr3 (229-275)||(45057115-45057161)
chr3 (229-275)||(45532363-45532409)
chr3 (235-272)||(19349443-19349480)
chr3 (231-275)||(20509970-20510014)
chr3 (235-275)||(42229906-42229946)
chr3 (243-275)||(48333212-48333244)
chr3 (243-275)||(48334155-48334187)
[»] chr7 (35 HSPs)
chr7 (71-273)||(19510725-19510927)
chr7 (63-275)||(8028901-8029113)
chr7 (71-275)||(16564055-16564258)
chr7 (71-275)||(16601404-16601607)
chr7 (71-275)||(26773395-26773602)
chr7 (136-275)||(1042882-1043021)
chr7 (71-233)||(40095869-40096031)
chr7 (103-267)||(4291799-4291966)
chr7 (71-233)||(39520982-39521144)
chr7 (71-231)||(36660680-36660838)
chr7 (71-233)||(11829912-11830069)
chr7 (71-179)||(26843779-26843887)
chr7 (71-156)||(27397865-27397950)
chr7 (71-146)||(34122430-34122505)
chr7 (90-179)||(34238385-34238474)
chr7 (94-156)||(38265010-38265072)
chr7 (90-156)||(42897208-42897274)
chr7 (229-275)||(11830459-11830505)
chr7 (229-275)||(23078923-23078969)
chr7 (229-275)||(27397419-27397465)
chr7 (235-275)||(21409629-21409669)
chr7 (229-275)||(48163699-48163745)
chr7 (235-275)||(23969962-23970002)
chr7 (235-275)||(26973296-26973336)
chr7 (231-275)||(33454327-33454371)
chr7 (235-275)||(48153784-48153824)
chr7 (229-275)||(16851074-16851120)
chr7 (229-275)||(19820812-19820858)
chr7 (229-275)||(27354212-27354258)
chr7 (229-275)||(27555147-27555193)
chr7 (240-274)||(35160128-35160162)
chr7 (229-275)||(36661235-36661281)
chr7 (229-275)||(47238052-47238098)
chr7 (229-274)||(36763610-36763655)
chr7 (235-275)||(554726-554766)
[»] scaffold0250 (1 HSPs)
scaffold0250 (63-267)||(5736-5940)
[»] chr5 (35 HSPs)
chr5 (63-275)||(10657046-10657262)
chr5 (79-273)||(5985781-5985974)
chr5 (71-233)||(1639526-1639688)
chr5 (71-233)||(33829973-33830135)
chr5 (71-233)||(12852322-12852484)
chr5 (71-233)||(26794737-26794899)
chr5 (71-233)||(30918564-30918726)
chr5 (76-233)||(9792518-9792670)
chr5 (71-179)||(7977451-7977559)
chr5 (71-179)||(32625097-32625205)
chr5 (71-149)||(41392533-41392611)
chr5 (74-156)||(32707644-32707726)
chr5 (102-179)||(39690267-39690344)
chr5 (229-275)||(12852882-12852928)
chr5 (229-275)||(15066449-15066495)
chr5 (229-275)||(22738095-22738141)
chr5 (229-275)||(26691875-26691921)
chr5 (229-275)||(26961607-26961653)
chr5 (229-275)||(27085607-27085653)
chr5 (238-275)||(7629291-7629328)
chr5 (229-274)||(18001781-18001826)
chr5 (235-275)||(1795635-1795675)
chr5 (235-275)||(26716515-26716555)
chr5 (235-275)||(26986255-26986295)
chr5 (232-275)||(1639090-1639133)
chr5 (229-275)||(3701322-3701368)
chr5 (229-275)||(5612255-5612301)
chr5 (229-275)||(9793068-9793114)
chr5 (229-275)||(17138068-17138114)
chr5 (229-275)||(39690031-39690077)
chr5 (234-275)||(34032625-34032666)
chr5 (235-275)||(3934623-3934663)
chr5 (235-275)||(14836574-14836614)
chr5 (235-275)||(27938401-27938441)
chr5 (235-275)||(43357595-43357635)
[»] chr1 (39 HSPs)
chr1 (71-275)||(31653116-31653318)
chr1 (71-273)||(13012692-13012894)
chr1 (71-275)||(14334372-14334575)
chr1 (71-275)||(43189857-43190061)
chr1 (109-275)||(37346656-37346822)
chr1 (71-233)||(8132382-8132544)
chr1 (71-233)||(6916608-6916770)
chr1 (71-233)||(38330649-38330811)
chr1 (71-233)||(52895447-52895609)
chr1 (71-234)||(30323929-30324091)
chr1 (71-233)||(3427072-3427234)
chr1 (71-233)||(25256825-25256987)
chr1 (71-233)||(28659052-28659212)
chr1 (71-233)||(5984396-5984558)
chr1 (74-156)||(1043455-1043537)
chr1 (99-179)||(20409318-20409398)
chr1 (95-149)||(38948974-38949028)
chr1 (102-179)||(28948745-28948822)
chr1 (233-275)||(3708100-3708142)
chr1 (229-275)||(25257376-25257422)
chr1 (229-275)||(30324479-30324525)
chr1 (229-272)||(5984946-5984989)
chr1 (240-275)||(9781889-9781924)
chr1 (233-275)||(28658704-28658746)
chr1 (229-275)||(36363356-36363402)
chr1 (229-275)||(36367480-36367526)
chr1 (229-275)||(37104410-37104456)
chr1 (235-275)||(9528680-9528720)
chr1 (232-275)||(47654925-47654968)
chr1 (229-275)||(2472737-2472783)
chr1 (229-275)||(3427616-3427662)
chr1 (229-275)||(6916164-6916210)
chr1 (233-275)||(24851732-24851774)
chr1 (229-275)||(28948509-28948555)
chr1 (229-275)||(38331209-38331255)
chr1 (235-275)||(10822636-10822676)
chr1 (235-275)||(29168189-29168229)
chr1 (235-275)||(34096389-34096429)
chr1 (235-275)||(34432251-34432291)
[»] chr6 (15 HSPs)
chr6 (70-275)||(32130359-32130564)
chr6 (99-275)||(31740516-31740692)
chr6 (71-233)||(1036560-1036722)
chr6 (71-218)||(7188539-7188686)
chr6 (71-156)||(8357171-8357256)
chr6 (230-275)||(10894333-10894378)
chr6 (229-275)||(7188079-7188125)
chr6 (229-275)||(31195651-31195697)
chr6 (229-274)||(13061189-13061234)
chr6 (235-275)||(19128395-19128435)
chr6 (229-275)||(1036116-1036162)
chr6 (235-272)||(234551-234588)
chr6 (243-275)||(22988940-22988972)
chr6 (243-275)||(23799424-23799456)
chr6 (231-275)||(26327555-26327599)
[»] chr8 (37 HSPs)
chr8 (56-275)||(6028689-6028907)
chr8 (71-267)||(19947684-19947880)
chr8 (71-275)||(42949282-42949486)
chr8 (79-275)||(19436473-19436669)
chr8 (79-275)||(19572622-19572818)
chr8 (99-270)||(25022391-25022566)
chr8 (71-233)||(4246139-4246301)
chr8 (71-233)||(34901115-34901277)
chr8 (71-233)||(45216966-45217128)
chr8 (63-275)||(32877657-32877872)
chr8 (71-233)||(43771438-43771600)
chr8 (73-233)||(28876311-28876471)
chr8 (71-233)||(5539632-5539794)
chr8 (73-233)||(36483649-36483804)
chr8 (73-233)||(37668795-37668949)
chr8 (121-233)||(32638681-32638793)
chr8 (71-179)||(13422424-13422532)
chr8 (71-156)||(16384840-16384925)
chr8 (71-156)||(2872730-2872815)
chr8 (113-233)||(12580272-12580387)
chr8 (71-129)||(12580390-12580448)
chr8 (229-275)||(12579838-12579884)
chr8 (229-275)||(32760125-32760171)
chr8 (229-275)||(36484194-36484240)
chr8 (229-275)||(27109009-27109055)
chr8 (229-275)||(28875867-28875913)
chr8 (229-275)||(32638516-32638562)
chr8 (229-275)||(45216522-45216568)
chr8 (229-275)||(4246699-4246745)
chr8 (229-275)||(5540192-5540238)
chr8 (229-275)||(22201120-22201166)
chr8 (229-275)||(34900671-34900717)
chr8 (229-275)||(37669339-37669385)
chr8 (229-275)||(43771006-43771052)
chr8 (235-275)||(3892206-3892246)
chr8 (233-273)||(8170922-8170962)
chr8 (63-107)||(25022333-25022377)
[»] chr4 (28 HSPs)
chr4 (71-275)||(5835043-5835247)
chr4 (71-233)||(3403318-3403480)
chr4 (71-233)||(8063841-8064003)
chr4 (136-275)||(28377174-28377314)
chr4 (71-218)||(14795219-14795366)
chr4 (71-218)||(5325472-5325619)
chr4 (74-233)||(41145828-41145987)
chr4 (71-233)||(52572407-52572564)
chr4 (71-233)||(53322552-53322714)
chr4 (78-233)||(31226557-31226712)
chr4 (74-156)||(52122682-52122764)
chr4 (90-179)||(19738930-19739019)
chr4 (90-179)||(42472375-42472464)
chr4 (195-255)||(43509753-43509813)
chr4 (231-275)||(55900962-55901006)
chr4 (229-275)||(53323111-53323157)
chr4 (235-275)||(1177219-1177259)
chr4 (229-275)||(3402874-3402920)
chr4 (229-275)||(8063397-8063443)
chr4 (229-275)||(14795779-14795825)
chr4 (229-275)||(38492062-38492108)
chr4 (233-275)||(39957950-39957992)
chr4 (229-275)||(41146376-41146422)
chr4 (229-275)||(42630292-42630338)
chr4 (229-267)||(44521868-44521906)
chr4 (243-275)||(31227126-31227158)
chr4 (235-275)||(40694312-40694352)
chr4 (239-275)||(51859041-51859077)
[»] scaffold0005 (2 HSPs)
scaffold0005 (71-218)||(44365-44512)
scaffold0005 (229-275)||(43906-43952)
[»] scaffold0060 (1 HSPs)
scaffold0060 (71-233)||(30181-30343)
[»] scaffold0037 (2 HSPs)
scaffold0037 (71-233)||(27523-27690)
scaffold0037 (229-270)||(27092-27133)
[»] scaffold0112 (2 HSPs)
scaffold0112 (71-232)||(41822-41983)
scaffold0112 (229-275)||(41385-41431)
[»] scaffold0640 (1 HSPs)
scaffold0640 (74-156)||(7900-7982)
[»] scaffold0177 (1 HSPs)
scaffold0177 (71-156)||(25363-25446)


Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 5371167 - 5371379
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaaca 162  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5371167 aaaaaaacataagaataaaatcattatattactataatatgtatacatttcctttatctttctttggtgtcagtacgacccacaccataccacataaaca 5371266  T
Q  163 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgataca 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |    
T  5371267 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccttccactttggatatagtgcttcttttttggatcgatata 5371366  T
Q  263 gtatagcactaac 275  Q
    |||||||||||||    
T  5371367 gtatagcactaac 5371379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 18301195 - 18301397
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18301195 ataagaataaaaacattatattattataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatc 18301294  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||| | |||||||    
T  18301295 ttcccctttctaaaaaattagggtttcaactttttcttccaaaatggtcgccttccactttggatacagtgcttcttttttggatcgatataatatagca 18301394  T
Q  271 cta 273  Q
    |||    
T  18301395 cta 18301397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 12819443 - 12819619
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 198  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12819443 atatatatacatttcatttatctttctttggtgccggtacgacccacatcataccacagaaacaatttcatcttcccctttttaaaaaattagggtttca 12819542  T
Q  199 actttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    || ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  12819543 accttttcttccaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtatagcattaac 12819619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 70 - 275
Target Start/End: Original strand, 20536937 - 20537143
Alignment:
Q  70 cataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcat 169  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||| | ||||||||||||    
T  20536937 cataagaataaaaatattatattactataatatatatacatttcctttatctttctttggggacag-acgacccacaccaaaccaaacaaacaatttcat 20537035  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgc--ttcttttttggatcgatacagtata 267  Q
    |||||||||| ||||||||||||||||||| ||||| || ||||||||| ||| ||||||||||||||| |||  || ||||||||||||||| ||||||    
T  20537036 cttcccctttctaaaaaattagggtttcaattttttttttcaaaatggtcgccttccactttggatatagtgctttttttttttggatcgatatagtata 20537135  T
Q  268 gcactaac 275  Q
    ||||||||    
T  20537136 gcactaac 20537143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 6124399 - 6124561
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  6124399 ataagaataaaaacattatattactataatatatatatatttcctttatctatctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 6124498  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||    
T  6124499 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgctgtccactttgg 6124561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 4170416 - 4170259
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||     |||||||| ||||    
T  4170416 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgtcagtacgacccacaccacac-----aaacaattgcatc 4170322  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  4170321 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 4170259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 22484478 - 22484641
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataa-acaatttcat 169  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||| |||    
T  22484478 ataaaaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaacccaattacat 22484577  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    ||| |||||  ||| |||||| |||||||||||||||||||||| ||||  || ||||||||||    
T  22484578 ctttcccttactaagaaattaaggtttcaactttttcttccaaagtggtcaccgtccactttgg 22484641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 6497563 - 6497409
Alignment:
Q  73 aagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatctt 172  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||     ||| |||| ||||||    
T  6497563 aagagtaaaaacattatattactataat-tatatacatttcctttatctttctttggtgccagtacgacccacaccacac-----aaaaaattgcatctt 6497470  T
Q  173 cccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
     |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  6497469 tccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 6497409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 40308715 - 40308582
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 198  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||| || ||||| ||||||  ||||| ||| ||||||||||||||    
T  40308715 atatatatatatttcctttatctttctttagtgccagtacgacccacaccacatcacacaaccaattgcatctt-tcctttctaagaaattagggtttca 40308617  T
Q  199 actttttcttccaaaatggttgccctccactttgg 233  Q
    ||||||||||||||| |||| ||| ||||||||||    
T  40308616 actttttcttccaaagtggtcgccgtccactttgg 40308582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 16562022 - 16562130
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||| ||||    
T  16562022 ataagaataaaaacattatattattataatatatatacatttcctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatc 16562121  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  16562122 tttcccttt 16562130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 22571163 - 22571241
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacacca 149  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22571163 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacacca 22571241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 33325046 - 33325128
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  33325046 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 33325128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 38602215 - 38602133
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  38602215 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccaaaccaca 38602133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 7876946 - 7877035
Alignment:
Q  90 attactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| || ||||| |||||| ||||||    
T  7876946 attactataatatatatacattttctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatctttcccttt 7877035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 14824381 - 14824421
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  14824381 tataatgcttcttttttggatcgatatagtatagcactaac 14824421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 4169868 - 4169822
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||    
T  4169868 tttggatataatgcttcatttttggatcgatatagtataacactaac 4169822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 6497019 - 6496973
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  6497019 tttggatatagtgcttcttttttggatcgatatagtataggactaac 6496973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 22485039 - 22485085
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  22485039 tttggatatagtgattcttttttggatcgatatagtatagcactaac 22485085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 40308184 - 40308138
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  40308184 tttggatatagtgattcttttttggatcgatatagtatagcactaac 40308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 6124943 - 6124989
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  6124943 tttggatatagtgattcttttttggatcgatatagtataacactaac 6124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 7807203 - 7807157
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  7807203 tttggatatagtgattcttttttggatcgatatagtataacactaac 7807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 10573752 - 10573798
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  10573752 tttggatatagtgcttattttttggatcgataaagtataacactaac 10573798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 31236046 - 31236000
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||||    
T  31236046 tttggatatagtgcttcttttttagatcgatatagtataacactaac 31236000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 34146438 - 34146484
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  34146438 tttggatataatgcttattttttagattgatatagtatagcactaac 34146484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 45159032 - 45158991
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaa 274  Q
    |||||| |||||||||||| |||||||| |||||||||||||    
T  45159032 gatatagtgcttcttttttagatcgatatagtatagcactaa 45158991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 2319535 - 2319579
Alignment:
Q  231 tggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| |||||||||||||||| |||| |||||| |||||||    
T  2319535 tggatatagtgcttcttttttggattgatatagtataacactaac 2319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 24585785 - 24585817
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  24585785 ttcttttttggatcgatatagtatagcactaac 24585817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 44156840 - 44156880
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||| | ||||| ||||||    
T  44156840 tataatgcttcttttttggatcgatataatatagaactaac 44156880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 22310935 - 22311147
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaaca 162  Q
    |||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22310935 aaaaaaacataagaaaaaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacagaaaca 22311034  T
Q  163 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgataca 262  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |    
T  22311035 atttcatcttccccttgttaaaaaattagggtttcaactttttctttcaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatata 22311134  T
Q  263 gtatagcactaac 275  Q
    |||||||| ||||    
T  22311135 gtatagcattaac 22311147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 28882584 - 28882380
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28882584 ataagaataaaaacattatattactataatatatatacatttcttttatctttctttggtgccagtacgacccacactataccacaaaaacaatttcatc 28882485  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||  |||||||| |||||||||    
T  28882484 ttcccctttttaaaaaattagggtttcaactttttcttccaaagtggtcgccttccactttggatatagtgcttctttttatgatcgatatagtatagca 28882385  T
Q  271 ctaac 275  Q
     ||||    
T  28882384 ttaac 28882380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 70 - 270
Target Start/End: Complemental strand, 50287251 - 50287052
Alignment:
Q  70 cataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcat 169  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  50287251 cataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgc-agtacgacccacaccataccacaaaaacaatttcat 50287153  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagc 269  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||||||||| || |||||||||||||||||| ||||||||    
T  50287152 ctttccctttttaaaaaattagagtttcaactttttcttccaaaatggtcgcctgccactttggatatagtgtttcttttttggatcgatatagtatagc 50287053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 73 - 267
Target Start/End: Original strand, 35389965 - 35390159
Alignment:
Q  73 aagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatctt 172  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  35389965 aagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgcgagtacgatccacaccataccacagaaacaatttcatctt 35390064  T
Q  173 cccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtata 267  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  35390065 ccccattttaaaaaattagggtttcaacttttttttctaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtata 35390159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 99 - 275
Target Start/End: Original strand, 52121404 - 52121579
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 198  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| ||| ||| ||| | |||||||||||||||||||||| ||||||||||||||||||    
T  52121404 atatatatatatttcctttatctttctttggttctagtacgaccaacatcat-ccatagaaacaatttcatcttcccctttctaaaaaattagggtttca 52121502  T
Q  199 actttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||  ||||||||||||||| | ||||||||||||    
T  52121503 actttttcttccaaaatggtcgccttccactttggatatagtgctctttttttggatcgatataatatagcactaac 52121579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 48123036 - 48123199
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgcc-agtacgacccacaccataccacataaacaatttcat 169  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||| |||    
T  48123036 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgcttagtacgacccacaccataccacacaaccaattgcat 48123135  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    ||| |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  48123136 ctttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 48123199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 10225057 - 10224895
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| || ||||| ||||    
T  10225057 ataagaataaaaacattatattactataatatatatacatttcttttatctttatttggtgccagtacgacccacaccaaaccacacaaccaattgcatc 10224958  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  10224957 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 10224895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 28704949 - 28705111
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||||| ||||    
T  28704949 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacatcacacaaccaattgcatc 28705048  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || || ||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  28705049 tttccttttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 28705111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 52505729 - 52505567
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  52505729 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 52505630  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||  ||| ||||||||||||||||||||||||||||| ||||  || ||||||||||    
T  52505629 tttcccttactaagaaattagggtttcaactttttcttccaaagtggtcaccgtccactttgg 52505567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 1679604 - 1679442
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || ||||| ||||    
T  1679604 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacccaaccaattgcatc 1679505  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||| ||||||||||||||||| || | ||| ||||||||||    
T  1679504 tttccctttctaagaaattagggttccaactttttcttccaaagtgatcgccgtccactttgg 1679442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 42464839 - 42464677
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||  |||    
T  42464839 ataagaataaaaatattatattactataatatatatacatttcttttatctttctttggtgccagtacgacccacaccacaccacacaaccaattggatc 42464740  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| |||||||||||||||||||||||||| || |||| ||| ||||||||||    
T  42464739 tttccctttctaagaaattagggtttcaactttttcttcctaagtggtcgccgtccactttgg 42464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 25936948 - 25936819
Alignment:
Q  89 tattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaat 188  Q
    |||| |||||||||||||||||||||||||||  |||||||||| ||||||||||||| || ||||||||||||||| |||||| |||||| ||| ||||    
T  25936948 tattgctataatatatatacatttcctttatccatctttggtgctagtacgacccacatcacaccacataaacaattgcatctttccctttctaagaaat 25936849  T
Q  189 tagggtttcaactttttcttccaaaatggt 218  Q
    ||||||||||||||||| || |||| ||||    
T  25936848 tagggtttcaactttttatttcaaagtggt 25936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 53192701 - 53192809
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||| ||||    
T  53192701 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatc 53192800  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  53192801 tttcccttt 53192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 45532890 - 45532805
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  45532890 ataagaataaaaatattatattactataatatatatacatttcctttatctttctttggtgccagtacgagtcacaccacaccaca 45532805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 22610623 - 22610577
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22610623 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 22610577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 25936425 - 25936379
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  25936425 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 25936379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 30787421 - 30787375
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  30787421 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 30787375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 1528805 - 1528851
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  1528805 tttggatatagtgattcttttttggatcgatatagtatagcactaac 1528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 13353051 - 13353009
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  13353051 gatatagtgcttcttttttggatcgacacagtatagcactaac 13353009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 37996637 - 37996591
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  37996637 tttggatatagtgattcttttttggatcgatatagtatagcactaac 37996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 52505170 - 52505124
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||    
T  52505170 tttggatataatgattcttttttggatcgatatagtataacactaac 52505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 1679027 - 1678981
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  1679027 tttggatatagtgattcttttttggatcgatatagtatatcactaac 1678981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 7327996 - 7328042
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  7327996 tttggatatagtgattcttttttggatcgatatagtataacactaac 7328042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 19421674 - 19421720
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||| ||||||| |||||| |||||||    
T  19421674 tttggatatagtgcttcttttttgaatcgatatagtataacactaac 19421720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 21006219 - 21006177
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||||||||| |||||||| |||||| |||||||    
T  21006219 gatataatgcttcttttttagatcgatatagtataacactaac 21006177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 21157588 - 21157542
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  21157588 tttggatatagtgcttctttttttgattgatatagtatagcactaac 21157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 38888945 - 38888899
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  38888945 tttggatatagtgcttattttttggattgataaagtatagcactaac 38888899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 45057161 - 45057115
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||| ||||||||||||||| |||| | |||||||    
T  45057161 tttggatataatgcttattttttggatcgatatagtacaacactaac 45057115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 45532409 - 45532363
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||||||| |||| | ||||||||||||    
T  45532409 tttggatatagtgcttcttttttggattgatataatatagcactaac 45532363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 19349480 - 19349443
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcact 272  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  19349480 tatagtgcttcttttttggatcgatatagtatagcact 19349443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 20510014 - 20509970
Alignment:
Q  231 tggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||    
T  20510014 tggatatagtgcttcttttttggatcgacatagtataacactaac 20509970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 42229906 - 42229946
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  42229906 tatattgcttcttttttgaatcgatatagtatagcactaac 42229946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 48333212 - 48333244
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  48333212 ttcttttttggatcgatatagtatagcactaac 48333244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 48334155 - 48334187
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  48334155 ttcttttttggatcgatatagtatagcactaac 48334187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 71 - 273
Target Start/End: Original strand, 19510725 - 19510927
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19510725 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatc 19510824  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| | |||| ||    
T  19510825 ttcccctttctaaaaaattagggtttcaactttttcttccaaaatggttgccttccactttggatatagtgcttctttcttggatcgatataatataaca 19510924  T
Q  271 cta 273  Q
    |||    
T  19510925 cta 19510927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 8028901 - 8029113
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaaca 162  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  8028901 aaaaaaacataagaataaaaacattatattactataatatatatacatttcatttatctttctttggtgtcagtacgacccacaccatacgacagaaaca 8029000  T
Q  163 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgataca 262  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||| ||||||| |    
T  8029001 atttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaatggtcgccttccactttggatatagtacttcttttttgaatcgatata 8029100  T
Q  263 gtatagcactaac 275  Q
     ||||||||||||    
T  8029101 ctatagcactaac 8029113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 16564258 - 16564055
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  16564258 ataagaataaaaacattacattactataatatatatacatttcctttatctttctttggtgccagtaagactcacaccataccacaaaaacaatttcatc 16564159  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  16564158 ttcccc-ttttaaaaaattagggtttcaactttttctttcaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtatagca 16564060  T
Q  271 ctaac 275  Q
     ||||    
T  16564059 ttaac 16564055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 16601404 - 16601607
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  16601404 ataagaataaaaacattacattactataatatatatacatttcctttatctttctttggtgccagtaagactcacaccataccacaaaaacaatttcatc 16601503  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  16601504 ttcccc-ttttaaaaaattagggtttcaactttttctttcaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtatagca 16601602  T
Q  271 ctaac 275  Q
     ||||    
T  16601603 ttaac 16601607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 26773602 - 26773395
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  26773602 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacagaaacaatttcatc 26773503  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgcc----ctccactttggatataatgcttcttttttggatcgatacagtat 266  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| |||     || |||||||||||||||||||||||||||||||||| |||||    
T  26773502 ttcccctttct-aaaaattagggtttcaactttttcttccaaaatggtcgccttctttcaactttggatataatgcttcttttttggatcgatatagtat 26773404  T
Q  267 agcactaac 275  Q
    |||||||||    
T  26773403 agcactaac 26773395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 136 - 275
Target Start/End: Complemental strand, 1043021 - 1042882
Alignment:
Q  136 tacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||    
T  1043021 tacgacccacaccataccacataaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaatgatcgccttccactttggat 1042922  T
Q  236 ataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||| ||||||||||||||||||||| |||||| |||||||    
T  1042921 atagtgcttcttttttggatcgatatagtataacactaac 1042882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 40095869 - 40096031
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  40095869 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 40095968  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  40095969 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 40096031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 4291799 - 4291966
Alignment:
Q  103 atatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||||||    
T  4291799 atatacatttcctttatctttctttggtgccagtacgacccacaccataccatagaaacaatttcatcttcccctttttaaaatactagggtttcaactt 4291898  T
Q  203 tttcttccaaa----atggttgccctccactttggatataatgcttcttttttggatcgatacagtata 267  Q
    |||||||||||    ||||| ||| |||||||||||| || |||||| |||||||||||||| ||||||    
T  4291899 tttcttccaaaatgcatggtcgccttccactttggatgtagtgcttc-tttttggatcgatatagtata 4291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 39520982 - 39521144
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| || ||||| ||||    
T  39520982 ataagaataaaaacattatattactataatatatatacatttcttttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatc 39521081  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  39521082 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 39521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 36660680 - 36660838
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||||||| ||||    
T  36660680 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtatgacccacaccacaccac--aaacaattgcatc 36660777  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccacttt 231  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  36660778 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccacttt 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 11829912 - 11830069
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||     |||||||| ||||    
T  11829912 ataagaataaaaatattatattactataatatatatacatatcctttatctttctttggtgccagtacgatccacaccacac-----aaacaattgcatc 11830006  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  11830007 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 11830069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 26843887 - 26843779
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||| ||||    
T  26843887 ataagaataaaaatattatattactataatatatatacatttcctttatctttctttggtgcccgtacgacccacaccacaccacacaatcaattgcatc 26843788  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  26843787 tttcccttt 26843779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 27397950 - 27397865
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27397950 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccaca 27397865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 34122505 - 34122430
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccaca 146  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34122505 ataagaataaaaacattatattactataatatatatacatttcatttatctttctttggtgccagtacgacccaca 34122430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 34238385 - 34238474
Alignment:
Q  90 attactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||  || ||||| |||||| ||||||    
T  34238385 attactataatatatatacattttctttatctttctttggtgcccgtacgacccacaccacaccacgcaaccaattgcatctttcccttt 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 38265010 - 38265072
Alignment:
Q  94 ctataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  38265010 ctataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 38265072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 42897208 - 42897274
Alignment:
Q  90 attactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||    
T  42897208 attactataatatatatacattttctttatctttctttggtgcccgtacgacccgcaccacaccaca 42897274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 11830459 - 11830505
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  11830459 tttggatataatgcttcttttttggatcgatatagtatagcactaac 11830505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 23078969 - 23078923
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  23078969 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 23078923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 27397465 - 27397419
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  27397465 tttggatataatgcttcttttttggatcgatatattatagcactaac 27397419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 21409629 - 21409669
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  21409629 tataatgcttcttttttggatcgatatagtatagcactaac 21409669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 48163699 - 48163745
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  48163699 tttggatatagtgattcttttttggatcgatatagtatagcactaac 48163745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 23970002 - 23969962
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  23970002 tatagtgcttcttttttggatcgatatagtatagcactaac 23969962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 26973296 - 26973336
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  26973296 tatagtgcttcttttttggatcgatatagtatagcactaac 26973336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 33454327 - 33454371
Alignment:
Q  231 tggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||    
T  33454327 tggatatagtgcttcttttttggatcgatatagtataacactaac 33454371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 48153784 - 48153824
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  48153784 tatagtgcttcttttttggatcgatatagtatagcactaac 48153824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 16851074 - 16851120
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  16851074 tttggatatagtgattcttttttggatcgatatagtatatcactaac 16851120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 19820858 - 19820812
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  19820858 tttggatatagtgcttctttttcgaatcgatatagtatagcactaac 19820812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 27354212 - 27354258
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| | ||||||||||||    
T  27354212 tttggatatagtgattcttttttggatcgatataatatagcactaac 27354258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 27555193 - 27555147
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  27555193 tttggatatagtgattcttttttggatcgatatagtataacactaac 27555147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 35160128 - 35160162
Alignment:
Q  240 tgcttcttttttggatcgatacagtatagcactaa 274  Q
    ||||||||||||||||||||| |||||||||||||    
T  35160128 tgcttcttttttggatcgatatagtatagcactaa 35160162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 36661235 - 36661281
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| | ||||||||||||||||||||| |||||| |||||||    
T  36661235 tttggatacagtgcttcttttttggatcgataaagtataacactaac 36661281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 47238098 - 47238052
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  47238098 tttggatatagtgcttcttttttgaatcgatatagtatagcattaac 47238052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 36763655 - 36763610
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaa 274  Q
    |||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  36763655 tttggatatagtgcctcttttttggatcgatatagtataacactaa 36763610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 554766 - 554726
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| |||||| |||||||    
T  554766 tatagtgcttcttttttggatcgatatagtataacactaac 554726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 5736 - 5940
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaaca 162  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5736 aaaaaaacataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtatgacccacaccataccacataaaca 5835  T
Q  163 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgataca 262  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||| |||| |    
T  5836 atttcatcttcccctttttaaaaaatgagggtttcaactttttctttcaaaatggttgccttccactttggatatagtgcttctttttttgattgatata 5935  T
Q  263 gtata 267  Q
    |||||    
T  5936 gtata 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 3e-85; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 10657046 - 10657262
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaaca 162  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  10657046 aaaaaaacataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacagaaaca 10657145  T
Q  163 atttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgcc----ctccactttggatataatgcttcttttttggatcga 258  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||     || ||||||||||||||||||||||||||||||||    
T  10657146 atttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaatggtcgccttctttcaactttggatataatgcttcttttttggatcga 10657245  T
Q  259 tacagtatagcactaac 275  Q
    || ||||||||||||||    
T  10657246 tatagtatagcactaac 10657262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 273
Target Start/End: Complemental strand, 5985974 - 5985781
Alignment:
Q  79 aaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctt 178  Q
    |||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5985974 aaaaacattatattactataatatatatacattttttttatctttctttggtgccagtacgactcacaccataccacataaacaatttcatcttcccctt 5985875  T
Q  179 tttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcacta 273  Q
    | | ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| || || ||||||  ||||||| ||||||||||||    
T  5985874 tcttaaaaattggggtttcaactttttcttccaaaatggtcgccttccactttggatatagtg-tttttttttttatcgatatagtatagcacta 5985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 1639688 - 1639526
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||    
T  1639688 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgatccacaccacaccacacaaacaattgcatc 1639589  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||| ||||||||||||| |||| ||| ||||||||||    
T  1639588 tttccctttctaagaaattagggtttcaattttttcttccaaagtggtcgccgtccactttgg 1639526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 33829973 - 33830135
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||||| ||||    
T  33829973 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgtcagtacgacccacaccacaccacacaaccaattgcatc 33830072  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  33830073 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 33830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 12852322 - 12852484
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| || ||||| ||||    
T  12852322 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttagtgctagtacgacccacaccacaccacacaaccaattgcatc 12852421  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  12852422 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 12852484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 26794899 - 26794737
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| || ||||| ||||    
T  26794899 ataagaataaaaacattatattactataatatatatacatttcttttatctttatttggtgccagtacgacccacaccaaaccacacaaccaattgcatc 26794800  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  26794799 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 26794737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 30918564 - 30918726
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||  |||    
T  30918564 ataagaataaaaacattatattactataatatatatacatttcttttatctttctttggtgccagtacgacccacaccacaccacacaaccaattggatc 30918663  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| |||||||||||||||||||||||||| || |||| ||| ||||||||||    
T  30918664 tttccctttctaagaaattagggtttcaactttttcttcctaagtggtcgccgtccactttgg 30918726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 233
Target Start/End: Original strand, 9792518 - 9792670
Alignment:
Q  76 aataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccc 175  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     |||||| |   |||| |||||| ||    
T  9792518 aataaaaacattatattactataatatatatacatttcctttatctttctttggtgtcagtacgacccac-----accacacagctaattgcatctttcc 9792612  T
Q  176 ctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    |||| ||| ||||||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  9792613 ctttctaagaaattagggttccaactttttcttccaaagtggtcgccgtccactttgg 9792670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 7977451 - 7977559
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||| ||||    
T  7977451 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatc 7977550  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  7977551 tttcccttt 7977559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 32625097 - 32625205
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| || ||||| ||||    
T  32625097 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgctcgtacgacccacaccacaccacacaaccaattgcatc 32625196  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  32625197 tttcccttt 32625205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 41392611 - 41392533
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacacca 149  Q
    ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41392611 ataagaataaaaatattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacacca 41392533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 32707726 - 32707644
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  32707726 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 32707644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 39690344 - 39690267
Alignment:
Q  102 tatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| || ||||| |||||| ||||||    
T  39690344 tatatacattttctttatctttctttggtgccggtacgacccacaccacaccacacaaccaattgcatctttcccttt 39690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 12852882 - 12852928
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  12852882 tttggatataatgattcttttttggatcgatatagtatagcactaac 12852928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 15066449 - 15066495
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||    
T  15066449 tttggatataatgcttcttttttggatcaatatagtataacactaac 15066495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 22738095 - 22738141
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||    
T  22738095 tttggatatagtgcttcttttttggatcgatatagtataacactaac 22738141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 26691875 - 26691921
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||    
T  26691875 tttggatatagtgcttcttttttggatcgatagagtataacactaac 26691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 26961607 - 26961653
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||    
T  26961607 tttggatatagtgcttcttttttggatcgatagagtataacactaac 26961653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 27085607 - 27085653
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  27085607 tttggatatagtgcttcttttttggatcgatataatatagcactaac 27085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 7629291 - 7629328
Alignment:
Q  238 aatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7629291 aatgcttcttttttggatcgatatagtatagcactaac 7629328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 18001826 - 18001781
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaa 274  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||    
T  18001826 tttgaatatagtgcttcttttttggatcgataaagtatagcactaa 18001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 1795635 - 1795675
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  1795635 tatagtgcttcttttttggatcgatatagtatagcactaac 1795675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 26716515 - 26716555
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  26716515 tatagtgcttcttttttggatcgatatagtatagcactaac 26716555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 26986255 - 26986295
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  26986255 tatagtgcttcttttttggatcgatatagtatagcactaac 26986295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 1639133 - 1639090
Alignment:
Q  232 ggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||    
T  1639133 ggatatagtgcttcttttttggatcgatataatatagcactaac 1639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 3701322 - 3701368
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| | ||||||||||||||||||||| |||||| |||||||    
T  3701322 tttggatacagtgcttcttttttggatcgatatagtataacactaac 3701368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 5612301 - 5612255
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  5612301 tttggatatagtgcttctttttttgattgatatagtatagcactaac 5612255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 9793068 - 9793114
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  9793068 tttggatatagtgattcttttttggatcgatatagtatatcactaac 9793114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 17138114 - 17138068
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||||||| |||| | ||||||||||||    
T  17138114 tttggatatagtgcttcttttttggattgatataatatagcactaac 17138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 39690077 - 39690031
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  39690077 tttggatatagtgattcttttttggatcgatatagtataacactaac 39690031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 34032625 - 34032666
Alignment:
Q  234 atataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||    
T  34032625 atatagtgcttattttttggatcgataaagtatagcactaac 34032666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 3934663 - 3934623
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  3934663 tataatgcttcttttttggatcgatataatataacactaac 3934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 14836574 - 14836614
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| |||||| |||||||    
T  14836574 tatagtgcttcttttttggatcgatatagtatatcactaac 14836614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 27938401 - 27938441
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||| ||||||||||    
T  27938401 tatagtgcttcttttttggatcgatatagtgtagcactaac 27938441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 43357635 - 43357595
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||| ||||||| ||||||||||||||    
T  43357635 tatagtgcttcttttttgaatcgatatagtatagcactaac 43357595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 71 - 275
Target Start/End: Complemental strand, 31653318 - 31653116
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31653318 ataagaataaaaacattatattacta--atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatc 31653221  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  31653220 ttcccctttttaaaaaattaggttttcaactttttcttccaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtatagca 31653121  T
Q  271 ctaac 275  Q
     ||||    
T  31653120 ttaac 31653116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 13012894 - 13012692
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  13012894 ataagaataaaaacattatattattataatatatatacatttcctttatctttcttttgtgccggtacgacccacaccataccacagaaacaatttcatc 13012795  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| | |||||||    
T  13012794 ttcccctttctaaaaaattagggtttcaactttttcttccaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatataatatagca 13012695  T
Q  271 cta 273  Q
    |||    
T  13012694 cta 13012692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 14334372 - 14334575
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttccttt-atctttctttggtgccagtacgacccacaccataccacataaacaatttcat 169  Q
    |||| ||||||| ||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14334372 ataacaataaaaacattatattactataatatata--catttccttttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcat 14334469  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagc 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||    
T  14334470 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccttccactttggatatggtgcttcttttttggatcgatatagtatagc 14334569  T
Q  270 actaac 275  Q
    ||||||    
T  14334570 actaac 14334575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 43189857 - 43190061
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||||    
T  43189857 ataagaataaaaacattatattactatgatatatattcatttcctttatctttatttggtgtcagtacgactcacaccataccacagaaacaatttcatc 43189956  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43189957 ttcccctttttaaaaaattagggtttcaactttttctttcaaaatggtcgctttccactttggatatagtgcttcttttttggatcgatatagtatagca 43190056  T
Q  271 ctaac 275  Q
    |||||    
T  43190057 ctaac 43190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 109 - 275
Target Start/End: Complemental strand, 37346822 - 37346656
Alignment:
Q  109 atttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctt 208  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37346822 atttcctttatctttctttggtgccagtatgacccacaccataccacacaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctt 37346723  T
Q  209 ccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
     ||||||||||||| ||||||||||||||| |||||||||||| ||| |||| ||||||||| ||||    
T  37346722 tcaaaatggttgccttccactttggatatagtgcttctttttttgattgatatagtatagcattaac 37346656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 8132382 - 8132544
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  8132382 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 8132481  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  8132482 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 8132544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 6916770 - 6916608
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  6916770 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 6916671  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  6916670 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 6916608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 38330649 - 38330811
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  38330649 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 38330748  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  38330749 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 38330811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 52895609 - 52895447
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  52895609 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 52895510  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  52895509 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 52895447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 30323929 - 30324091
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||    
T  30323929 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacggcccacaccacaccacacaaacaattgcatc 30324028  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgga 234  Q
    || |||||| ||| |||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  30324029 tttccctttataagaaattagggtttcaac-ttttcttccaaagtggtcgccgtccactttgga 30324091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 3427072 - 3427234
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  3427072 ataagaataaaaacattatattactataatatatatacatttcctttatctatctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 3427171  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||    
T  3427172 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgctgtccactttgg 3427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 25256825 - 25256987
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||||    
T  25256825 ataagaataaaaatattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccataccacaccacacaaacaattgcatc 25256924  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| | || ||| ||||||||||    
T  25256925 tttccctttctaagaaattagggtttcaactttttcttccaaagtagtcgccgtccactttgg 25256987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 28659212 - 28659052
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| |||  |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28659212 ataagaataaaaacat--tattgctataatatatatacatttcctttatctatctttggtgccagtacgacccacaccacaccacacaaacaattgcatc 28659115  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  28659114 tttccctttctaagaaattagggtttcaactttttcttccaaagtgggtgccgtccactttgg 28659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 5984396 - 5984558
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||| |||||| |||||||| ||||    
T  5984396 ataagaataaaaatattatattactacaatatatatacatttcctttatttttctttggtgtcggtacgacccacaccacaccacacaaacaattgcatc 5984495  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    ||  ||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  5984496 ttttcctttataagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 5984558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 1043455 - 1043537
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  1043455 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 1043537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 20409398 - 20409318
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||    
T  20409398 atatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaatcaattacatctttcccttt 20409318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 38948974 - 38949028
Alignment:
Q  95 tataatatatatacatttcctttatctttctttggtgccagtacgacccacacca 149  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38948974 tataatatacatacatttcctttatctttctttggtgccagtacgacccacacca 38949028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 28948822 - 28948745
Alignment:
Q  102 tatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| || ||||| |||||| ||||||    
T  28948822 tatatacattttctttatctttctttggtgccggtacgacccacaccacaccacacaaccaattgcatctttcccttt 28948745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 3708142 - 3708100
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  3708142 gatataatgcttcttttttggatcgataaagtatagcactaac 3708100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 25257376 - 25257422
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  25257376 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 25257422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 30324479 - 30324525
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  30324479 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 30324525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 5984946 - 5984989
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcact 272  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  5984946 tttggatatagtgcttcttttttggatcgatatagtatagcact 5984989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 275
Target Start/End: Original strand, 9781889 - 9781924
Alignment:
Q  240 tgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||||||||||||||||||||||||||    
T  9781889 tgcttcttttttggatcgatacagtatagcactaac 9781924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 28658746 - 28658704
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  28658746 gatatagtgcttcttttttggatcgatatagtatagcactaac 28658704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 36363402 - 36363356
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  36363402 tttggatatagtgattcttttttggatcgatatagtatagcactaac 36363356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 36367526 - 36367480
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  36367526 tttggatatagtgattcttttttggatcgatatagtatagcactaac 36367480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 37104410 - 37104456
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  37104410 tttggatatagtgattcttttttggatcgatatagtatagcactaac 37104456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 9528720 - 9528680
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  9528720 tatagtgcttcttttttggatcgatatagtatagcactaac 9528680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 47654925 - 47654968
Alignment:
Q  232 ggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||    
T  47654925 ggatatagtgcttcttttttggatcgatatagtataacactaac 47654968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 2472783 - 2472737
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||  |||||||| ||||||||||||||    
T  2472783 tttggatatagtgcttctttttctgatcgataaagtatagcactaac 2472737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 3427616 - 3427662
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  3427616 tttggatatagtgattcttttttggatcgatatagtataacactaac 3427662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 6916210 - 6916164
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  6916210 tttggatatagtgattcttttttggatcgatatagtatatcactaac 6916164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 24851732 - 24851774
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||| || |||||||||||||||||| ||||||||||||||    
T  24851732 gatatagtgattcttttttggatcgatatagtatagcactaac 24851774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 28948555 - 28948509
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  28948555 tttggatatagtgattcttttttggatcgatatagtataacactaac 28948509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 38331209 - 38331255
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  38331209 tttggatatagtgattcttttttggatcgatatagtatatcactaac 38331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 10822636 - 10822676
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  10822636 tataatgcttcttttttggatcgatataatatatcactaac 10822676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 29168189 - 29168229
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||| ||| ||||||| ||||||    
T  29168189 tataatgcttcttttttggatcaatatagtatagtactaac 29168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 34096429 - 34096389
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| |||||||||||| |||||||| ||||||||||||||    
T  34096429 tatagtgcttcttttttagatcgatatagtatagcactaac 34096389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 34432291 - 34432251
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| |||||| |||||||    
T  34432291 tatagtgcttcttttttggatcgatatagtataacactaac 34432251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 70 - 275
Target Start/End: Complemental strand, 32130564 - 32130359
Alignment:
Q  70 cataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcat 169  Q
    |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  32130564 cataagaataaaaatattatattactataatatatatacatttcctttatctttctttggtgccagtacgacacacaccataccacagaaacaatttcat 32130465  T
Q  170 cttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagc 269  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  32130464 cttcccctttttaaaaaattagggtttcaacttttttttccaaaatagtcgccttccactttggatatagtgcttcttttttggatcaatatagtatagc 32130365  T
Q  270 actaac 275  Q
    | ||||    
T  32130364 attaac 32130359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 99 - 275
Target Start/End: Complemental strand, 31740692 - 31740516
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 198  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31740692 atatatacacattttctttatctttctttggtgccagtacgacccacaccacaccacataaacaatttcatcttcccctttctaaaaaattagggtttca 31740593  T
Q  199 actttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  31740592 actttttcttccaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtatagcactaac 31740516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 1036722 - 1036560
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  1036722 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 1036623  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  1036622 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 1036560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 7188686 - 7188539
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  7188686 ataagaataaaaacattatattactataatatatatacattttctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 7188587  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggt 218  Q
    || |||||  ||| ||||||||||||||||||||||||||||| ||||    
T  7188586 tttcccttactaagaaattagggtttcaactttttcttccaaagtggt 7188539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 8357171 - 8357256
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8357171 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccaca 8357256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 10894378 - 10894333
Alignment:
Q  230 ttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  10894378 ttggatatagtgcttcttttttggatcgatatagtatagcactaac 10894333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 7188125 - 7188079
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  7188125 tttggatatagtgattcttttttggatcgatatagtatagcactaac 7188079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 31195697 - 31195651
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  31195697 tttggatatagtgattcttttttggatcgatatagtatagcactaac 31195651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 13061234 - 13061189
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaa 274  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||    
T  13061234 tttggatatagcgcttcttttttggatcgatatagtatagcactaa 13061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 19128395 - 19128435
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  19128395 tatagtgcttcttttttggatcgatatagtatagcactaac 19128435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 1036162 - 1036116
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  1036162 tttggatatagtgattcttttttggatcgatatagtatatcactaac 1036116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 234551 - 234588
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcact 272  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  234551 tatagtgcttcttttttggatcgatatagtatagcact 234588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 22988972 - 22988940
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  22988972 ttcttttttggatcgatatagtatagcactaac 22988940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 23799424 - 23799456
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  23799424 ttcttttttggatcgatatagtatagcactaac 23799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 26327555 - 26327599
Alignment:
Q  231 tggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| ||||||||||||||||| ||| |||||| |||||||    
T  26327555 tggatatagtgcttcttttttggatcaatatagtataacactaac 26327599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 6028689 - 6028907
Alignment:
Q  56 aaataagaaaaaaccataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccac 155  Q
    |||||||||||||  |||||||||||| ||| ||||||| || |||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||     
T  6028689 aaataagaaaaaaa-ataagaataaaaacattatattaccatgatatatattcatttcctttatctttatttggtgtcagtacgacccacaccataccat 6028787  T
Q  156 ataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggat 255  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  6028788 agaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaagatggtcgccttccactttggatatagtgcttcttttttggat 6028887  T
Q  256 cgatacagtatagcactaac 275  Q
    ||||| ||||||||||||||    
T  6028888 cgatatagtatagcactaac 6028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 267
Target Start/End: Complemental strand, 19947880 - 19947684
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || ||||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| ||||||||||||     
T  19947880 ataagaataaaaatattatattactacaatatatatacatttcctttatcattctttggtgtcaatacgacccacaccataccacagaaacaatttcata 19947781  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtata 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  19947780 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggtcgccttccactttggatatagtgcttcttttttggatcgatatagtata 19947684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 42949282 - 42949486
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  42949282 ataagaataaaaacattatattactataatatatatacatttcttttatctttcttgggtgccagtacgatccacaccataccacataaacaatttcatc 42949381  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||| ||||| ||||||||| ||||||||||||||||| ||||||||| | | ||||||||||||||| ||||||||||||||||||||| ||||| |||    
T  42949382 ttcctcttttaaaaaaattaaggtttcaactttttctttcaaaatggtcgtcttccactttggatatagtgcttcttttttggatcgatatagtatcgca 42949481  T
Q  271 ctaac 275  Q
    |||||    
T  42949482 ctaac 42949486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 19436473 - 19436669
Alignment:
Q  79 aaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctt 178  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| | |||||||||||||||||||||    
T  19436473 aaaaacattatattactataatatatatacatttcctttatctttctttggtgcaggtatgacccacaccataccatagaaacaatttcatcttcccctt 19436572  T
Q  179 tttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  19436573 tttaaaaaattagggtttcaactttttctttcaaaatggtcgccttccactttagatatagtgcttcttttttggatcgatatagtatagcattaac 19436669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 79 - 275
Target Start/End: Original strand, 19572622 - 19572818
Alignment:
Q  79 aaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctt 178  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| | |||||||||||||||||||||    
T  19572622 aaaaacattatattactataatatatatacatttcctttatctttctttggtgcaggtatgacccacaccataccatagaaacaatttcatcttcccctt 19572721  T
Q  179 tttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  19572722 tttaaaaaattagggtttcaactttttctttcaaaatggtcgccttccactttagatatagtgcttcttttttggatcgatatagtatagcattaac 19572818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 99 - 270
Target Start/End: Original strand, 25022391 - 25022566
Alignment:
Q  99 atatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 198  Q
    ||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25022391 atatatatatatttcctttttttttttttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttca 25022490  T
Q  199 acttttt----cttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||||     |||||||||||| ||| ||||||||||||||| || |||||||||||||| ||| |||||||||    
T  25022491 acttttttttctttccaaaatggtcgccttccactttggatatagtgtttcttttttggatcaatatagtatagca 25022566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 4246139 - 4246301
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  4246139 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 4246238  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  4246239 tttccctttctaagaaattagggttccaactttttcttccaaagtggtcgccgtccactttgg 4246301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 34901277 - 34901115
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  34901277 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 34901178  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  34901177 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 34901115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 45217128 - 45216966
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  45217128 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 45217029  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||  ||| ||||||||||||||||||||||||||||| ||||  || ||||||||||    
T  45217028 tttcccttactaagaaattagggtttcaactttttcttccaaagtggtcaccgtccactttgg 45216966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 63 - 275
Target Start/End: Original strand, 32877657 - 32877872
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatatacatttc----ctttatctttctttggtgccagtacgacccacaccataccacata 158  Q
    |||||| |||||| |||||| ||| ||||| |||||||||||||| || |     ||||||||||||||||||||||||||||||||||||     || |    
T  32877657 aaaaaaacataagtataaaaacatgatattgctataatatatatatatatatattctttatctttctttggtgccagtacgacccacacca-----caga 32877751  T
Q  159 aacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggt----tgccctccactttggatataatgcttcttttttgga 254  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    | |  || |||||||||||| |||||||||||||||    
T  32877752 aacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaatggtcaccttctttcaactttggatatagtgcttcttttttgga 32877851  T
Q  255 tcgatacagtatagcactaac 275  Q
    |||||| ||||||||||||||    
T  32877852 tcgatatagtatagcactaac 32877872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 43771600 - 43771438
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| || ||||| ||||    
T  43771600 ataagaataaaaacattatattactataatatatatacatttcctttatctatctttggtgtcagtacgacccacaccacaccacacaaccaattgcatc 43771501  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||  ||||||||||    
T  43771500 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgctgtccactttgg 43771438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 28876471 - 28876311
Alignment:
Q  73 aagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatctt 172  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| || ||||| ||||||    
T  28876471 aagaataaaaacattatattactataatatatatacatttcttttatctttctttggtgccaatacgacccacaccacaccacacaaccaattgcatctt 28876372  T
Q  173 cccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
     |||||| ||| |||||||||||||||||||||||| |||| |||| ||| ||||||||||    
T  28876371 tccctttctaagaaattagggtttcaactttttctttcaaagtggtggccgtccactttgg 28876311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 5539632 - 5539794
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  5539632 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 5539731  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || ||||||  || ||||||  ||||||||||||||||||||| ||||  || ||||||||||    
T  5539732 tttccctttccaagaaattaaagtttcaactttttcttccaaagtggtcaccgtccactttgg 5539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 36483649 - 36483804
Alignment:
Q  73 aagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatctt 172  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     |||||||| ||||||    
T  36483649 aagagtaaaaacattatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccacac-----aaacaattgcatctt 36483743  T
Q  173 cccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
     |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  36483744 tccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 36483804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 37668795 - 37668949
Alignment:
Q  73 aagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatctt 172  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     |||||||| ||||||    
T  37668795 aagagtaaaaacattatattactataatatatatacatttcctttatctt-ctttggtgccagtacgacccacaccacac-----aaacaattgcatctt 37668888  T
Q  173 cccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
     | |||| ||| || |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  37668889 tctctttataagaatttagggtttcaactttttcttccaaagtggtcgccgtccactttgg 37668949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 32638793 - 32638681
Alignment:
Q  121 tttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttg 220  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||| ||| |||||||||||||||| |||||||||||| |||| |    
T  32638793 tttctttggtgccagtacgacccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaacattttcttccaaagtggtcg 32638694  T
Q  221 ccctccactttgg 233  Q
    || ||||||||||    
T  32638693 ccgtccactttgg 32638681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 13422424 - 13422532
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||| || ||||| ||||    
T  13422424 ataagaataaaaacattatattactatgatatatatacatttcctttatctttcttcggtgcccatacgacccacaccacaccacacaatcaattgcatc 13422523  T
Q  171 ttccccttt 179  Q
    || ||||||    
T  13422524 tttcccttt 13422532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 16384840 - 16384925
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  16384840 ataagaataaaaaaattatattactataatatatatacatttcctttatctttctttggtgcccgtacgatccacaccacaccaca 16384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 2872815 - 2872730
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||    
T  2872815 ataagaataaaaatattatattactataatatatatacatttcctttatcttattttggtgctagtacgacccacaccacaccaca 2872730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 12580387 - 12580272
Alignment:
Q  113 cctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaa 212  Q
    ||||||||| ||||||| |||||||||| |||||||| ||     |||||||| ||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  12580387 cctttatctctctttggagccagtacgatccacaccacac-----aaacaattgcatcttttcctttctaagaaattagggtttcaactttttcttccaa 12580293  T
Q  213 aatggttgccctccactttgg 233  Q
    | |||| ||  ||||||||||    
T  12580292 agtggtcgctgtccactttgg 12580272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 12580448 - 12580390
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttgg 129  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||    
T  12580448 ataagaataaaaacattatattactataatatatatacatatcctttatctctctttgg 12580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 12579884 - 12579838
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12579884 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 12579838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 32760125 - 32760171
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32760125 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 32760171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 36484194 - 36484240
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36484194 tttggatatagtgcttcttttttggatcgatatagtatagcactaac 36484240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 27109055 - 27109009
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||    
T  27109055 tttggatatagtgcttcttttttggatcgatatagtataacactaac 27109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 28875913 - 28875867
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||    
T  28875913 tttggatatagtgattcttttttggatcgatatagtatagcactaac 28875867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 32638562 - 32638516
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||    
T  32638562 tttggatatagtgcttcttttttggatcgatattgtatagcactaac 32638516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 45216568 - 45216522
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||    
T  45216568 tttggatataatgattcttttttggatcgatatagtataacactaac 45216522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 4246699 - 4246745
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  4246699 tttggatatagtgattcttttttggatcgatatagtatatcactaac 4246745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 5540192 - 5540238
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| | ||||||||||||    
T  5540192 tttggatatagtgattcttttttggatcgatataatatagcactaac 5540238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 22201166 - 22201120
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| ||||||| ||||||    
T  22201166 tttggatatagtgattcttttttggatcgatatagtatagtactaac 22201120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 34900717 - 34900671
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  34900717 tttggatatagtgattcttttttggatcgatatagtatatcactaac 34900671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 37669339 - 37669385
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||| ||| | ||||||||||||    
T  37669339 tttggatatagtgcttcttttttggatcaatataatatagcactaac 37669385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 43771052 - 43771006
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  43771052 tttggatatagtgattcttttttggatcgatatagtataacactaac 43771006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 3892206 - 3892246
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| |||||||||||||||| |||| ||||||||||||||    
T  3892206 tatagtgcttcttttttggattgatatagtatagcactaac 3892246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 8170962 - 8170922
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcacta 273  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  8170962 gatatagtgcttcttttttagatcgatatagtatagcacta 8170922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 25022333 - 25022377
Alignment:
Q  63 aaaaaaccataagaataaaatcatcatattactataatatatata 107  Q
    |||||| |||||||||||||  || ||||||||||||||||||||    
T  25022333 aaaaaaacataagaataaaaatattatattactataatatatata 25022377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 275
Target Start/End: Original strand, 5835043 - 5835247
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  5835043 ataaaaataaaaatattatattactataatatatatacatttcctttatctttctttggtgccagtacgacctacatcataccacagaaacaatttcatc 5835142  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||| |||||||||||| |||||||| |||||||||    
T  5835143 ttcccctttttaaaaaattagggtttcaactttttcttccaaagtggtccccttccactttggatatagtgcttctttttttgatcgatatagtatagca 5835242  T
Q  271 ctaac 275  Q
     ||||    
T  5835243 ttaac 5835247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 3403480 - 3403318
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||    
T  3403480 ataagagtaaaaacattatattactataatatatatacatttcctttatctttctttggtgtcagtacgacccacaccacaccacacaaacaattgcatc 3403381  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  3403380 tttccctttctaagaaattagggtttcaactttttcttccaaagtggttgccgtccactttgg 3403318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 8064003 - 8063841
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||    
T  8064003 ataagaataaaaacattatattactataatatatatatatttcctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatc 8063904  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  8063903 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 8063841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 136 - 275
Target Start/End: Original strand, 28377174 - 28377314
Alignment:
Q  136 tacgacccacaccataccacataaacaatttcatcttcccctttttaaaa-aattagggtttcaactttttcttccaaaatggttgccctccactttgga 234  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  28377174 tacgatccacaccataccacataaacaatttcatcttcccctttctaaaaaaattaggatttcaactttttcttccaaaatggtcgccttccactttgga 28377273  T
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  28377274 tatagtgcttcttttttggatcgatatagtatagcactaac 28377314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 14795219 - 14795366
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||| ||||    
T  14795219 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatc 14795318  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggt 218  Q
    || ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  14795319 tttcccttattaagaaattagggtttcaactttttcttccaaagtggt 14795366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 5325619 - 5325472
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||| ||||    
T  5325619 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtaccagtacgacccacaccacaccacacaaccaattgcatc 5325520  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggt 218  Q
    || |||||  ||| ||||||||||||||||||||||||||||| ||||    
T  5325519 tttcccttactaagaaattagggtttcaactttttcttccaaagtggt 5325472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 233
Target Start/End: Original strand, 41145828 - 41145987
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttc 173  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||| |||||| |||||||| ||||||     
T  41145828 agaataaaaacattatattactataatatatatacatttcttttctctttctttagtgtcagtacgacccacaccacaccacacaaacaattgcatcttt 41145927  T
Q  174 ccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    |||||| ||| ||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  41145928 ccctttctaagaaattagggtttcaactttttcttccaaagtggttgtcgtccactttgg 41145987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 52572407 - 52572564
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||     |||||||| ||||    
T  52572407 ataagaataaaaatattatattactataatatatatatatttcttttatctttctttggtgccagtacgacccacaccacac-----aaacaattgcatc 52572501  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  52572502 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccactttgg 52572564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 53322552 - 53322714
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||   |||| |||||||| |||     
T  53322552 ataagaataaaaacattatattactataatatatatacatttcatttatctttctttggtgcaagtacgaaccacaccacgacacacaaacaattgcatt 53322651  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| ||||||||||||||||||||||||||||| |||| ||| |||| |||||    
T  53322652 tttccctttctaagaaattagggtttcaactttttcttccaaagtggtcgccgtccagtttgg 53322714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 31226557 - 31226712
Alignment:
Q  78 taaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttcccct 177  Q
    ||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || |||||| || ||||| |||||| ||||    
T  31226557 taaaaacattatgttactataatatatatacatttcatttatctttctttggtgccagtacggcccacatcacaccacacaaccaattgcatctttccct 31226656  T
Q  178 ttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || | | |||||||| ||||||||||||||| |||| |||| ||| ||||||||||    
T  31226657 ttctgagaaattaggttttcaactttttctttcaaagtggtcgccgtccactttgg 31226712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 52122764 - 52122682
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  52122764 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 52122682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 19738930 - 19739019
Alignment:
Q  90 attactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| || ||||| ||| || ||||||    
T  19738930 attactataatatatatacattttctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatatttcccttt 19739019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 42472464 - 42472375
Alignment:
Q  90 attactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatcttccccttt 179  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||| || ||||| |||||| ||||||    
T  42472464 attactataatatatatacattttctttatctttctttagtgcccgtacgacccacaccacaccacacaaccaattgcatctttcccttt 42472375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 43509813 - 43509753
Alignment:
Q  195 ttcaactttttcttccaaaatggttgccctccactttggatataatgcttcttttttggat 255  Q
    ||||| |||||||| || |||||| ||| ||||||||||||||||||||||||||||||||    
T  43509813 ttcaattttttctttcagaatggtcgccttccactttggatataatgcttcttttttggat 43509753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 55901006 - 55900962
Alignment:
Q  231 tggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  55901006 tggatataatgcttcttttttggatcgatatagtataacactaac 55900962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 53323111 - 53323157
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||    
T  53323111 tttggatacagtgcttcttttttggatcgatatagtatagcactaac 53323157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 1177219 - 1177259
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  1177219 tataatgcttcttttttggattgatatagtatagcactaac 1177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 3402920 - 3402874
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  3402920 tttggatatagtgattcttttttggatcgatatagtatatcactaac 3402874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 8063443 - 8063397
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||||||||||||| |||||| |||||||    
T  8063443 tttggatatagtgattcttttttggatcgatatagtatatcactaac 8063397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 14795779 - 14795825
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||| ||||||||| ||||||||||||||    
T  14795779 tttggatatagtgattctttttcggatcgatatagtatagcactaac 14795825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 38492108 - 38492062
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    ||||||||||  | |||||||||||||||||| ||||||||||||||    
T  38492108 tttggatatagggattcttttttggatcgatatagtatagcactaac 38492062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 39957950 - 39957992
Alignment:
Q  233 gatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||| |||||||||||| |||||||| ||||||||||||||    
T  39957950 gatatagtgcttcttttttagatcgatatagtatagcactaac 39957992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 41146376 - 41146422
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||| ||||||| |||||| |||||||    
T  41146376 tttggatatagtgcttcttttttgaatcgatatagtataacactaac 41146422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 42630338 - 42630292
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||||    
T  42630338 tttggatataatgcttcttttttgaatcgatgtagtataacactaac 42630292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 44521906 - 44521868
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtata 267  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  44521906 tttgaatataatgcttcttttttggatcgatatagtata 44521868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 31227126 - 31227158
Alignment:
Q  243 ttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||||||||||    
T  31227126 ttcttttttggatcgatatagtatagcactaac 31227158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 40694312 - 40694352
Alignment:
Q  235 tataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||| ||||||| ||||||| ||||||    
T  40694312 tataatgcttcttttttgaatcgatatagtatagtactaac 40694352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 51859041 - 51859077
Alignment:
Q  239 atgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||||||||||||||| |||||| |||||||    
T  51859041 atgcttcttttttggatcgatatagtataacactaac 51859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 44512 - 44365
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||| ||||    
T  44512 ataagaataaaaacattatattactataatatatatacatttcctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatc 44413  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggt 218  Q
    || ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  44412 tttcccttattaagaaattagggtttcaactttttcttccaaagtggt 44365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 43952 - 43906
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| || |||||||| ||||||||| ||||||||||||||    
T  43952 tttggatatagtgattctttttcggatcgatatagtatagcactaac 43906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 30343 - 30181
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    ||||||||||||  || |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| || ||||| ||||    
T  30343 ataagaataaaaatattatattactataatatatatacatttcttttatctttctttggtgccagtatgacccacaccacaccacacaaccaattgcatc 30244  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
    || |||||| ||| |||||||||||||||||||||||| |||| |||| ||| ||||||||||    
T  30243 tttccctttctaagaaattagggtttcaactttttctttcaaagtggtcgccgtccactttgg 30181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 27690 - 27523
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacat-----aaacaatt 165  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||      ||||||||    
T  27690 ataagaataaaaacattatattactataatatatatacatttcatttatctttctttggtgccagtacgacccacaccacaccacaccatacaaacaatt 27591  T
Q  166 tcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttgg 233  Q
     |||||| |||||| ||| |||||| |||||||||||||||||||||| |||| ||| ||||||||||    
T  27590 gcatctttccctttctaagaaattaaggtttcaactttttcttccaaagtggtcgccgtccactttgg 27523  T

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Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 27133 - 27092
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagca 270  Q
    |||||||||  ||||||||||||||||||||| |||||||||    
T  27133 tttggatatggtgcttcttttttggatcgatatagtatagca 27092  T

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Target: scaffold0112 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 41983 - 41822
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccacataaacaatttcatc 170  Q
    |||||||||| |  || |||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||| ||||    
T  41983 ataagaataataagattatatcactaaaatatatatacatttcatttatctttctttggtgtcagtacgacccataccacaccacacaaacaattgcatc 41884  T
Q  171 ttcccctttttaaaaaattagggtttcaactttttcttccaaaatggttgccctccactttg 232  Q
    || | |||| ||| ||||||||||||||||||||||||||||| |||| | | |||||||||    
T  41883 tttcgctttctaagaaattagggtttcaactttttcttccaaagtggtcgtcgtccactttg 41822  T

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Target: scaffold0112; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 41431 - 41385
Alignment:
Q  229 tttggatataatgcttcttttttggatcgatacagtatagcactaac 275  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||    
T  41431 tttggatatagtgcttcttttttggatcgatatagtataacactaac 41385  T

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Target: scaffold0640 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 7982 - 7900
Alignment:
Q  74 agaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  7982 agaataaaaacattatattactataatatatatacatttcctttatctttttttggtgctagtacgacccacaccacaccaca 7900  T

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Target: scaffold0177 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 25446 - 25363
Alignment:
Q  71 ataagaataaaatcatcatattactataatatatatacatttcctttatctttctttggtgccagtacgacccacaccataccaca 156  Q
    |||||||||||| ||| ||||||||||||||||||||  |||||||||||||| ||| |||| |||||||||||||||| ||||||    
T  25446 ataagaataaaaacattatattactataatatatata--tttcctttatcttttttttgtgctagtacgacccacaccacaccaca 25363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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