View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2622_high_82 (Length: 250)
Name: NF2622_high_82
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2622_high_82 |
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Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 11134757 - 11134964
Alignment:
| Q |
18 |
taacattgctcataaagaattcattcaccatatagtagttggcataggattaaaataatggttcttt-aaatgttttcactcattgttgaaggcaccaca |
116 |
Q |
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| T |
11134757 |
taacattgctcataaagaattcattcacgatatattagttggcttaggattaaaataatggttcttttaaatgttttcattcattgttgaaggcaccaca |
11134856 |
T |
|
| Q |
117 |
tatgttggagattagattagaaacgaaaataacatatatgtaagaatcaaaaacatgttaaaatagatagatttttgatactat-aaaaaatcttttgat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
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| T |
11134857 |
tatgttggagattagattagaaacgaaaataacatatctatgagaatcaaaaacatgttaaaatagatagatttttgatactataaaaaaatcttttaat |
11134956 |
T |
|
| Q |
216 |
acaacgcc |
223 |
Q |
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|||||||| |
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| T |
11134957 |
acaacgcc |
11134964 |
T |
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