View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2622_low_62 (Length: 299)
Name: NF2622_low_62
Description: NF2622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2622_low_62 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 10 - 280
Target Start/End: Original strand, 27360997 - 27361266
Alignment:
| Q |
10 |
agatgaatggaatatacaaactttatataattcggtggaaaaaccttgccaaacaatataaaaggattaggcacagcactagtgcagataacacagtcca |
109 |
Q |
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| T |
27360997 |
agatggatggaatatacaaactttatataattcggtggaaaaaccttgccaaacaatataaaaggattaggcacagcactagtgcagataacacagtcca |
27361096 |
T |
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| Q |
110 |
taaacctttttgctcacagtggactatacaattttatgggagtatttgaaatagtttattttttctcttctaaaacgacaacaatttaaaaacacacaag |
209 |
Q |
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| T |
27361097 |
taaacctttttgctcacagtggactgtacaattttatgggagtatttgaaatagtttattttttctcttctaaaacgacaataatttaaaaacacacaag |
27361196 |
T |
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| Q |
210 |
agtttatatttacttcatggaaaaactaaaacagaagttggtctaaaaatgttagtgtcaatattcttcta |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
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| T |
27361197 |
agtttatatttacttcatggaaaaactaaaacagaagtt-gaaaaaaaatgttagtgtcaatattcttcta |
27361266 |
T |
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