View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2623-Insertion-6 (Length: 477)

Name: NF2623-Insertion-6
Description: NF2623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2623-Insertion-6
NF2623-Insertion-6
[»] chr7 (34 HSPs)
chr7 (254-454)||(33786076-33786275)
chr7 (8-126)||(22004400-22004518)
chr7 (8-126)||(22004209-22004327)
chr7 (8-126)||(7891177-7891295)
chr7 (8-129)||(13927057-13927177)
chr7 (9-88)||(3600053-3600130)
chr7 (134-199)||(33786330-33786395)
chr7 (8-65)||(3061617-3061674)
chr7 (8-65)||(13400723-13400780)
chr7 (8-65)||(20959419-20959476)
chr7 (8-65)||(26161925-26161982)
chr7 (8-65)||(45112713-45112770)
chr7 (8-72)||(29954243-29954307)
chr7 (8-78)||(13927376-13927444)
chr7 (8-58)||(5090921-5090971)
chr7 (8-65)||(5091034-5091091)
chr7 (8-65)||(7884939-7884996)
chr7 (8-65)||(7890743-7890800)
chr7 (8-60)||(3600181-3600233)
chr7 (8-60)||(7889219-7889271)
chr7 (8-54)||(22004563-22004609)
chr7 (8-65)||(22003511-22003568)
chr7 (8-65)||(27712699-27712756)
chr7 (8-65)||(32035234-32035291)
chr7 (8-65)||(32656690-32656747)
chr7 (8-72)||(31097950-31098014)
chr7 (8-54)||(7891340-7891386)
chr7 (8-65)||(16719033-16719090)
chr7 (8-65)||(17693243-17693300)
chr7 (8-65)||(32656790-32656847)
chr7 (28-65)||(7891138-7891175)
chr7 (8-38)||(16719118-16719148)
chr7 (8-38)||(17693328-17693358)
chr7 (8-38)||(27712784-27712814)
[»] chr3 (49 HSPs)
chr3 (8-129)||(18199235-18199356)
chr3 (8-126)||(36093996-36094114)
chr3 (8-127)||(26943588-26943707)
chr3 (12-131)||(36094191-36094309)
chr3 (8-129)||(18256806-18256924)
chr3 (33-126)||(26943780-26943873)
chr3 (36-128)||(851106-851198)
chr3 (7-78)||(855059-855130)
chr3 (9-130)||(52419554-52419674)
chr3 (8-72)||(6953323-6953387)
chr3 (8-72)||(36947618-36947682)
chr3 (8-72)||(36947757-36947821)
chr3 (8-72)||(36947896-36947960)
chr3 (8-65)||(18256685-18256742)
chr3 (8-65)||(35713141-35713198)
chr3 (8-65)||(47724552-47724609)
chr3 (8-72)||(6953705-6953769)
chr3 (8-60)||(31483606-31483658)
chr3 (8-65)||(1883373-1883430)
chr3 (8-61)||(6953844-6953897)
chr3 (8-65)||(11823954-11824011)
chr3 (8-65)||(18199173-18199230)
chr3 (8-65)||(26943936-26943993)
chr3 (8-65)||(49566025-49566082)
chr3 (8-72)||(6953462-6953526)
chr3 (9-65)||(38662208-38662264)
chr3 (7-65)||(851252-851310)
chr3 (8-54)||(18199401-18199447)
chr3 (8-54)||(36948035-36948081)
chr3 (8-58)||(43509732-43509782)
chr3 (8-65)||(4585533-4585590)
chr3 (8-65)||(13458634-13458691)
chr3 (8-65)||(17657175-17657232)
chr3 (8-65)||(26943025-26943082)
chr3 (8-65)||(33006087-33006143)
chr3 (8-60)||(12257888-12257940)
chr3 (7-54)||(26949097-26949144)
chr3 (8-58)||(16647460-16647510)
chr3 (8-54)||(36093905-36093951)
chr3 (8-54)||(38662173-38662219)
chr3 (8-65)||(35860562-35860619)
chr3 (8-65)||(36091038-36091095)
chr3 (8-65)||(36094944-36095001)
chr3 (8-65)||(36095159-36095216)
chr3 (8-38)||(4585618-4585648)
chr3 (8-38)||(12257968-12257998)
chr3 (8-38)||(13458576-13458606)
chr3 (33-65)||(26943554-26943586)
chr3 (33-65)||(36094306-36094338)
[»] chr1 (39 HSPs)
chr1 (8-129)||(35598188-35598309)
chr1 (8-126)||(2052097-2052215)
chr1 (8-129)||(35597753-35597874)
chr1 (8-129)||(39514239-39514360)
chr1 (8-129)||(45507435-45507556)
chr1 (8-78)||(45507286-45507356)
chr1 (37-129)||(38211808-38211900)
chr1 (7-65)||(50704586-50704644)
chr1 (8-65)||(22194875-22194932)
chr1 (8-65)||(22195045-22195102)
chr1 (8-65)||(36455222-36455279)
chr1 (8-60)||(48647756-48647808)
chr1 (8-65)||(7476024-7476081)
chr1 (8-65)||(7476585-7476642)
chr1 (8-65)||(9530051-9530108)
chr1 (8-65)||(42492470-42492527)
chr1 (8-65)||(48958565-48958622)
chr1 (8-60)||(15689392-15689444)
chr1 (8-58)||(15689232-15689282)
chr1 (8-54)||(39514148-39514194)
chr1 (8-65)||(2051786-2051843)
chr1 (8-65)||(2052592-2052649)
chr1 (8-65)||(2585415-2585472)
chr1 (8-65)||(13929163-13929220)
chr1 (8-65)||(36871046-36871103)
chr1 (8-65)||(45507105-45507162)
chr1 (8-54)||(2052006-2052052)
chr1 (8-65)||(49791088-49791145)
chr1 (8-65)||(49791465-49791522)
chr1 (8-65)||(49791644-49791701)
chr1 (8-65)||(49791920-49791977)
chr1 (29-72)||(26209958-26210001)
chr1 (8-54)||(35598097-35598143)
chr1 (28-65)||(2052217-2052254)
chr1 (21-65)||(49791754-49791798)
chr1 (21-65)||(49792030-49792074)
chr1 (8-38)||(49791030-49791060)
chr1 (8-38)||(49791407-49791437)
chr1 (9-54)||(35597721-35597765)
[»] chr5 (26 HSPs)
chr5 (8-126)||(23179426-23179544)
chr5 (12-131)||(23179231-23179349)
chr5 (8-131)||(20844878-20845001)
chr5 (8-129)||(20844636-20844757)
chr5 (8-129)||(20842238-20842359)
chr5 (8-78)||(20844440-20844510)
chr5 (8-77)||(32672736-32672804)
chr5 (8-65)||(10037189-10037246)
chr5 (8-78)||(20842438-20842508)
chr5 (8-78)||(20845080-20845150)
chr5 (8-65)||(12651292-12651349)
chr5 (8-65)||(23178415-23178472)
chr5 (8-65)||(23184344-23184401)
chr5 (8-65)||(34757338-34757395)
chr5 (8-65)||(39874172-39874229)
chr5 (8-59)||(23180082-23180133)
chr5 (8-54)||(32672849-32672895)
chr5 (8-65)||(3611853-3611910)
chr5 (8-65)||(20109139-20109196)
chr5 (8-65)||(20109907-20109964)
chr5 (8-54)||(23179589-23179635)
chr5 (8-58)||(30094376-30094426)
chr5 (8-58)||(32671996-32672046)
chr5 (8-65)||(23178673-23178730)
chr5 (8-38)||(3611795-3611825)
chr5 (33-78)||(20844836-20844881)
[»] chr4 (39 HSPs)
chr4 (8-126)||(22673728-22673846)
chr4 (8-126)||(41862244-41862362)
chr4 (8-126)||(52680154-52680272)
chr4 (8-130)||(41946761-41946885)
chr4 (8-126)||(41862435-41862543)
chr4 (8-65)||(16905836-16905893)
chr4 (8-65)||(29363875-29363932)
chr4 (8-65)||(35756423-35756480)
chr4 (8-65)||(42345117-42345174)
chr4 (8-65)||(42345238-42345295)
chr4 (8-60)||(21380325-21380377)
chr4 (8-58)||(53285650-53285700)
chr4 (8-65)||(28380258-28380315)
chr4 (8-65)||(29363547-29363604)
chr4 (8-65)||(29363754-29363811)
chr4 (8-54)||(22673893-22673939)
chr4 (8-54)||(41861971-41862017)
chr4 (8-54)||(41862062-41862108)
chr4 (8-54)||(41862153-41862199)
chr4 (8-65)||(14148579-14148636)
chr4 (8-65)||(30390848-30390905)
chr4 (8-65)||(52679741-52679798)
chr4 (8-65)||(53285763-53285820)
chr4 (8-54)||(41946579-41946625)
chr4 (8-54)||(41946670-41946716)
chr4 (8-54)||(52680317-52680363)
chr4 (8-65)||(14148433-14148490)
chr4 (8-65)||(19518515-19518572)
chr4 (8-65)||(21585331-21585388)
chr4 (8-65)||(25819683-25819740)
chr4 (8-65)||(41863184-41863241)
chr4 (8-65)||(22673294-22673351)
chr4 (28-65)||(22673689-22673726)
chr4 (24-65)||(29363649-29363690)
chr4 (8-38)||(14148521-14148551)
chr4 (8-38)||(19518457-19518487)
chr4 (8-38)||(21585273-21585303)
chr4 (8-38)||(25819768-25819798)
chr4 (28-58)||(52680122-52680152)
[»] chr2 (51 HSPs)
chr2 (8-126)||(26453329-26453447)
chr2 (8-126)||(40603165-40603283)
chr2 (8-124)||(13905694-13905810)
chr2 (8-126)||(13899794-13899912)
chr2 (8-129)||(1925675-1925796)
chr2 (8-124)||(27999686-27999802)
chr2 (8-124)||(28090420-28090536)
chr2 (8-124)||(28096743-28096859)
chr2 (8-128)||(35433171-35433287)
chr2 (7-78)||(35433021-35433092)
chr2 (8-78)||(1925526-1925596)
chr2 (8-65)||(1501790-1501847)
chr2 (8-65)||(19640906-19640963)
chr2 (8-65)||(19839499-19839556)
chr2 (8-72)||(32287404-32287468)
chr2 (8-65)||(180206-180263)
chr2 (8-65)||(980053-980110)
chr2 (8-65)||(980506-980563)
chr2 (8-65)||(2444119-2444176)
chr2 (8-65)||(5001150-5001207)
chr2 (8-65)||(5012820-5012877)
chr2 (8-65)||(19641068-19641125)
chr2 (8-65)||(19839661-19839718)
chr2 (8-65)||(26452895-26452952)
chr2 (54-131)||(27999854-27999931)
chr2 (54-131)||(28090588-28090665)
chr2 (54-131)||(28096911-28096988)
chr2 (8-65)||(36440133-36440190)
chr2 (8-72)||(32287265-32287329)
chr2 (8-60)||(42111698-42111750)
chr2 (8-54)||(13905855-13905901)
chr2 (8-65)||(204360-204417)
chr2 (8-65)||(2296976-2297033)
chr2 (8-65)||(13899096-13899153)
chr2 (8-65)||(14039713-14039770)
chr2 (8-65)||(25643737-25643794)
chr2 (8-56)||(40603325-40603373)
chr2 (8-54)||(26453492-26453538)
chr2 (8-65)||(6120837-6120894)
chr2 (8-65)||(40602731-40602788)
chr2 (9-65)||(21591215-21591271)
chr2 (39-111)||(35433287-35433359)
chr2 (55-105)||(1271964-1272014)
chr2 (12-65)||(13900052-13900105)
chr2 (28-65)||(26453290-26453327)
chr2 (8-61)||(32287012-32287065)
chr2 (28-65)||(40603126-40603163)
chr2 (8-38)||(2297061-2297091)
chr2 (8-38)||(6120922-6120952)
chr2 (8-38)||(25643822-25643852)
chr2 (33-65)||(13899759-13899791)
[»] chr6 (8 HSPs)
chr6 (8-129)||(3589182-3589303)
chr6 (8-65)||(2271852-2271909)
chr6 (8-58)||(29374268-29374318)
chr6 (8-65)||(33049750-33049807)
chr6 (8-60)||(29371716-29371768)
chr6 (13-65)||(33007319-33007371)
chr6 (8-58)||(24456436-24456486)
chr6 (8-65)||(29921026-29921083)
[»] scaffold0121 (5 HSPs)
scaffold0121 (8-126)||(41126-41244)
scaffold0121 (8-65)||(40825-40882)
scaffold0121 (8-54)||(41289-41335)
scaffold0121 (8-54)||(41380-41426)
scaffold0121 (33-65)||(41086-41118)
[»] scaffold0160 (3 HSPs)
scaffold0160 (8-129)||(36015-36136)
scaffold0160 (8-78)||(36363-36433)
scaffold0160 (8-78)||(36215-36285)
[»] chr8 (13 HSPs)
chr8 (7-65)||(19958069-19958127)
chr8 (8-65)||(18278560-18278617)
chr8 (8-65)||(24014145-24014202)
chr8 (8-72)||(18489800-18489864)
chr8 (8-65)||(18489931-18489988)
chr8 (8-65)||(37985475-37985532)
chr8 (8-58)||(22732239-22732289)
chr8 (8-65)||(21637062-21637119)
chr8 (8-65)||(410107-410164)
chr8 (17-65)||(37985586-37985634)
chr8 (8-58)||(24011241-24011291)
chr8 (8-41)||(41377841-41377874)
chr8 (8-38)||(410049-410079)
[»] scaffold1113 (1 HSPs)
scaffold1113 (8-65)||(2507-2564)
[»] scaffold0097 (3 HSPs)
scaffold0097 (8-65)||(44663-44720)
scaffold0097 (24-58)||(48794-48828)
scaffold0097 (33-65)||(51514-51546)
[»] scaffold0642 (2 HSPs)
scaffold0642 (8-65)||(303-360)
scaffold0642 (8-38)||(388-418)
[»] scaffold0345 (2 HSPs)
scaffold0345 (8-65)||(10214-10271)
scaffold0345 (8-38)||(10299-10329)
[»] scaffold0105 (2 HSPs)
scaffold0105 (8-65)||(28709-28766)
scaffold0105 (8-38)||(28651-28681)
[»] scaffold0374 (2 HSPs)
scaffold0374 (8-65)||(116-173)
scaffold0374 (8-38)||(58-88)
[»] scaffold0119 (2 HSPs)
scaffold0119 (55-105)||(29223-29273)
scaffold0119 (55-105)||(35476-35526)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 4e-79; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 254 - 454
Target Start/End: Complemental strand, 33786275 - 33786076
Alignment:
Q  254 caaacaatatagtgtcgagagtcgcacaccttaattataga--attttagattaatccatgaggttagatgtatggaaggatcaattattatagaaaaca 351  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||  ||||||||||||||||||| |||||||||||||||||||||   ||||||||    
T  33786275 caaacaatatagtgtcgagaatcgcacaccttaattatagagaattggagattaatccatgaggttatatgtatggaaggatcaattat---agaaaaca 33786179  T
Q  352 aaggctaattgaataaattagtgtcttagaacgactttagctgggataattggtcttgcaatgcaaggccttgtgctaaattatttcggatcactagtta 451  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33786178 aaggctaattgaataaactagtgtctgagaacgactgtagctgggataattggtcttgcaatgcaaggccttgtgctaaattatttcggatcactagtta 33786079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 22004518 - 22004400
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  22004518 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttgggttaaatattaggtggaattagggcaacaat 22004419  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  22004418 gttaggtttataaataaaa 22004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 22004327 - 22004209
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  22004327 gtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattcggtggaattagggcaacaat 22004228  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  22004227 gttaggtttataaataaaa 22004209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 7891295 - 7891177
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||| |||||||||    
T  7891295 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaaatagctataattttttaggttaaatattagttggaattagggcaacaat 7891196  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  7891195 gttaggtttataaataaaa 7891177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 13927177 - 13927057
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||    
T  13927177 gtttggaggagggaaattaggaaatatagttaggttttgaaggagggaaa-gtggctacaattttttaggttaaatattaggtgaaattagggcaacaat 13927079  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  13927078 gttaggtttataaataaaagat 13927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 3600053 - 3600130
Alignment:
Q  9 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattag 88  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||||    
T  3600053 tttggaggaggggaattaggaaatatggttaggttttgaaggaaggaaaagtggctacaa--ttttaggttaaatattag 3600130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 33786395 - 33786330
Alignment:
Q  134 taattccttaaccaaatctcagttacttcgtgaagattgttatccacagttgtacaaagtagacac 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33786395 taattccttaaccgaatctcagttacttcgtgaagattgttatccacagttgtacgaagtagacac 33786330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 3061617 - 3061674
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3061617 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagtggcta 3061674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 13400723 - 13400780
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13400723 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 13400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 20959419 - 20959476
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20959419 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 20959476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26161982 - 26161925
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26161982 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26161925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 45112770 - 45112713
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45112770 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 45112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 29954307 - 29954243
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  29954307 gtttggaggaggggagttatgaaatatggttaggttttgaaggagggaaaagtggctacaatttt 29954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 13927444 - 13927376
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||    
T  13927444 gtttggaggaggggaattaggaaatatggttaggttttgaag--gggaaaagtggcaacaattttttaggt 13927376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 5090971 - 5090921
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5090971 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 5091091 - 5091034
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5091091 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagttgcta 5091034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 7884996 - 7884939
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7884996 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 7890800 - 7890743
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7890800 gtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7890743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 3600181 - 3600233
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3600181 gtttggaggaggggaattaggaaatatcgttaggttttgaaggagggaaaagt 3600233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 7889219 - 7889271
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7889219 gtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagt 7889271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22004609 - 22004563
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22004609 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22004563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 22003568 - 22003511
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  22003568 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 22003511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 27712756 - 27712699
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  27712756 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 27712699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 32035291 - 32035234
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  32035291 gtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 32035234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 32656747 - 32656690
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  32656747 gtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 32656690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31098014 - 31097950
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||| ||||||    
T  31098014 gtttggaggaggggagttaagaaatatggttaggttttgaaggaggaaaaaatggctacaatttt 31097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 7891386 - 7891340
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  7891386 gtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 7891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 16719090 - 16719033
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  16719090 gtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 16719033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 17693300 - 17693243
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  17693300 gtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 17693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 32656847 - 32656790
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  32656847 gtttggaggaggtgaattagggaatatggttaggttttgaatgagggaaaagttgcta 32656790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 7891175 - 7891138
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7891175 gaaatatggttaggttttgaaggagggaaaagttgcta 7891138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 16719148 - 16719118
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  16719148 gtttggaggaggggaattaggaaatatggtt 16719118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 17693358 - 17693328
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  17693358 gtttggaggaggggaattaggaaatatggtt 17693328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 27712814 - 27712784
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  27712814 gtttggaggaggggaattaggaaatatggtt 27712784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 18199356 - 18199235
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  18199356 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 18199257  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  18199256 gttaggtttataaataaaagat 18199235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36093996 - 36094114
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  36093996 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 36094095  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  36094096 gttaggtttataaataaaa 36094114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 26943707 - 26943588
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  26943707 gtttggaggaggggaattagtaaatatggttaggttttgaaggagggaaaagtgactataattttttaggttaaatattaggtggaattatggcaacaat 26943608  T
Q  108 gttaggtttataaataaaag 127  Q
    ||||||||||||||||||||    
T  26943607 gttaggtttataaataaaag 26943588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 36094191 - 36094309
Alignment:
Q  12 ggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgtta 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  36094191 ggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaatgtta 36094290  T
Q  112 ggtttataaataaaagatgg 131  Q
    |||||||||| |||||||||    
T  36094291 ggtttataaa-aaaagatgg 36094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 18256806 - 18256924
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||| ||   ||||    
T  18256806 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgactacaattttttagcttaaatattaggtggaattacgg---caat 18256902  T
Q  108 gttaggtttataaataaaagat 129  Q
    |||| |||||||||||||||||    
T  18256903 gttaagtttataaataaaagat 18256924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 26943873 - 26943780
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaa 126  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  26943873 atgggtaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaatgttaggtttataaataaaa 26943780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 851198 - 851106
Alignment:
Q  36 gttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaaga 128  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  851198 gttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaataaaaga 851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 855130 - 855059
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  855130 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgtctacaattttttaggt 855059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 52419554 - 52419674
Alignment:
Q  9 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatg 108  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |  ||||||||||||| ||    
T  52419554 tttggagaaggggaattagaaaatatggttaggttttgaaggagggaaaagtggctacga-tttttaggttaaatattaggtataattaaggcaacagtg 52419652  T
Q  109 ttaggtttataaataaaagatg 130  Q
     |  |||||| ||||| |||||    
T  52419653 ctttgtttatgaataagagatg 52419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 6953323 - 6953387
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  6953323 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggttacaatttt 6953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 36947618 - 36947682
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  36947618 gtttggaggaggggaatttggaaatatggttaggttttgaaggagggaaaagtggctacaatttt 36947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 36947757 - 36947821
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36947757 gtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttt 36947821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 36947896 - 36947960
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36947896 gtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaatttt 36947960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 18256685 - 18256742
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18256685 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 35713198 - 35713141
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35713198 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 35713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 47724609 - 47724552
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47724609 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 47724552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 6953705 - 6953769
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  6953705 gtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagtggttacaatttt 6953769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 31483658 - 31483606
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31483658 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 31483606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 1883373 - 1883430
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  1883373 gtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 1883430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6953844 - 6953897
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtg 61  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6953844 gtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagtg 6953897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 11824011 - 11823954
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11824011 gtttggagaaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 11823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 18199173 - 18199230
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18199173 gtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 18199230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26943993 - 26943936
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26943993 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26943936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 49566025 - 49566082
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49566025 gtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 49566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 6953462 - 6953526
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||| || ||||||    
T  6953462 gtttggaggaggggaattaggaaatatggttaggttttaagggagggaaaagtggttacaatttt 6953526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 38662208 - 38662264
Alignment:
Q  9 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  38662208 tttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagttgcta 38662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 851310 - 851252
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  851310 agtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 851252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 18199447 - 18199401
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18199447 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 18199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 36948035 - 36948081
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36948035 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 36948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 43509732 - 43509782
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43509732 gtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 43509782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 4585590 - 4585533
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  4585590 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 4585533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 13458634 - 13458691
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  13458634 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 13458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 17657232 - 17657175
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  17657232 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 17657175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26943082 - 26943025
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  26943082 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 26943025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 33006087 - 33006143
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  33006087 gtttggaggaggggaattaggaaata-ggttaggttttgaaggagggaaaagttgcta 33006143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 12257940 - 12257888
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  12257940 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagt 12257888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26949144 - 26949097
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26949144 agtttggaggaggggagttaggaaatatggttaggttttgaaggaggg 26949097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 16647510 - 16647460
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  16647510 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 16647460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 36093905 - 36093951
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  36093905 gtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 36093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38662173 - 38662219
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  38662173 gtttggaggaggggaattaggaaatatggttaggttttggaggaggg 38662219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 35860562 - 35860619
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||    
T  35860562 gtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 35860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36091038 - 36091095
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||||||||| ||||    
T  36091038 gtttggaggagaggaactagggaatatggttaggttttgaaggagggaaaagttgcta 36091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36094944 - 36095001
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  36094944 gtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 36095001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36095159 - 36095216
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||    
T  36095159 gtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36095216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 4585648 - 4585618
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  4585648 gtttggaggaggggaattaggaaatatggtt 4585618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 12257998 - 12257968
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  12257998 gtttggaggaggggaattaggaaatatggtt 12257968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 13458576 - 13458606
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  13458576 gtttggaggaggggaattaggaaatatggtt 13458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 26943586 - 26943554
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||| ||||    
T  26943586 atggttaggttttgaaggagggaaaagttgcta 26943554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 36094306 - 36094338
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||| ||||    
T  36094306 atggttaggttttgaaggagggaaaagttgcta 36094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 35598188 - 35598309
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35598188 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 35598287  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  35598288 gttaggtttataaataaaagat 35598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 2052097 - 2052215
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  2052097 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatattagttggaattagggcaacaat 2052196  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  2052197 gttaggtttataaataaaa 2052215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 35597753 - 35597874
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35597753 gtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 35597852  T
Q  108 gttaggtttataaataaaagat 129  Q
     |||||||||||||||||||||    
T  35597853 tttaggtttataaataaaagat 35597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 39514239 - 39514360
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |    
T  39514239 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaactagggcaacatt 39514338  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  39514339 gttaggtttataaataaaagat 39514360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 45507435 - 45507556
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataat-tttttaggttaaatattagatggaattaaggcaacaa 106  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||| ||| ||||||||||||||||||| | |||||| | ||||||    
T  45507435 gtttggaggaggggaattaggaaatatagttaggttttgaagaaaggaaaaatggctacaatatttttaggttaaatattaggt-gaattaggacaacaa 45507533  T
Q  107 tgttaggtttataaataaaagat 129  Q
    |||||||||||||||||||||||    
T  45507534 tgttaggtttataaataaaagat 45507556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 45507286 - 45507356
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45507286 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttttaggt 45507356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 38211808 - 38211900
Alignment:
Q  37 ttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaagat 129  Q
    ||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||    
T  38211808 ttaggttttaaaggagggaaaaatggctacaattttttaggttaaatattaggtggaattagtgcaacattgttaggtttataaataaaagat 38211900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 50704644 - 50704586
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50704644 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 50704586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 22194932 - 22194875
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22194932 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 22195102 - 22195045
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22195102 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 22195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 36455279 - 36455222
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36455279 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 36455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 48647808 - 48647756
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48647808 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 48647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 7476081 - 7476024
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7476081 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7476024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 7476642 - 7476585
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7476642 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 7476585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 9530108 - 9530051
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9530108 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 9530051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 42492527 - 42492470
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42492527 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42492470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 48958622 - 48958565
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  48958622 gtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 48958565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 15689444 - 15689392
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15689444 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagt 15689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 15689282 - 15689232
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15689282 gtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 15689232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 39514148 - 39514194
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39514148 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 39514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2051786 - 2051843
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  2051786 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 2051843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2052592 - 2052649
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  2052592 gtttggaggagggaaattagaaaatatggttaggttttgaaggagggaaaagttgcta 2052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2585472 - 2585415
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2585472 gtttagaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 2585415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 13929163 - 13929220
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  13929163 gtttggaggaggggaatttggtaatatggttaggttttgaaggagggaaaagttgcta 13929220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36871046 - 36871103
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  36871046 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 36871103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 45507105 - 45507162
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  45507105 gtttggaggaagggaattagggaatatggttaggttttgaaggagggaaaagttgcta 45507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2052006 - 2052052
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  2052006 gtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 2052052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 49791088 - 49791145
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  49791088 gtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 49791465 - 49791522
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  49791465 gtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 49791644 - 49791701
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791644 gtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 49791920 - 49791977
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49791920 gtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaagttgcta 49791977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 26210001 - 26209958
Alignment:
Q  29 aaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||    
T  26210001 aaatatggttaggttttaaaggagggaaaagtggctacaatttt 26209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 35598097 - 35598143
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  35598097 gtttggaggagggaaattaggaaacatgcttaggttttgaaggaggg 35598143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 2052217 - 2052254
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  2052217 gaaatatggttaggttttgaaggagggaaaagttgcta 2052254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 49791754 - 49791798
Alignment:
Q  21 gaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  49791754 gaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49791798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 49792030 - 49792074
Alignment:
Q  21 gaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  49792030 gaattaggaaatatggttaagttttaaaggagggaaaagttgcta 49792074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 49791030 - 49791060
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  49791030 gtttggaggaggggaattaggaaatatggtt 49791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 49791407 - 49791437
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  49791407 gtttggaggaggggaattaggaaatatggtt 49791437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 35597721 - 35597765
Alignment:
Q  9 tttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||    
T  35597721 tttggaggaggg-aattaggaaatatggttagggtttggaggaggg 35597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 8e-56; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 23179544 - 23179426
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  23179544 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 23179445  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  23179444 gttaggtttataaataaaa 23179426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 23179349 - 23179231
Alignment:
Q  12 ggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgtta 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  23179349 ggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaatgtta 23179250  T
Q  112 ggtttataaataaaagatgg 131  Q
    |||||||||| |||||||||    
T  23179249 ggtttataaa-aaaagatgg 23179231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 20845001 - 20844878
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||| |    
T  20845001 gtttggaggaagggaattaggaaatattgttaggttttgaaggaggaaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagt 20844902  T
Q  108 gttaggtttataaataaaagatgg 131  Q
    ||||||||||||||||||||||||    
T  20844901 gttaggtttataaataaaagatgg 20844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 20844757 - 20844636
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| || | | |||||||||||||||||||||| |||||||| ||||||| |    
T  20844757 gtttggaggaggggaattaggaaatatcgttaggttttgaatgagggaaaaatgaccacaattttttaggttaaatattaggtggaattagggcaacagt 20844658  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  20844657 gttaggtttataaataaaagat 20844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 20842359 - 20842238
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||  ||| || |    
T  20842359 gtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaaatggctacaattttttaagttaaatattaggtggaattagagcagcagt 20842260  T
Q  108 gttaggtttataaataaaagat 129  Q
    |||| |||||||||||||||||    
T  20842259 gttacgtttataaataaaagat 20842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 20844510 - 20844440
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20844510 gtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaaatggctacaattttttaggt 20844440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 32672804 - 32672736
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttagg 77  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32672804 gtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa-tggctataattttttagg 32672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 10037246 - 10037189
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10037246 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 10037189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 20842508 - 20842438
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||||| ||||||||||||    
T  20842508 gtttggaggaggggaattatgaaatatggttatgttttgaatgagggaaaaatggctacaattttttaggt 20842438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 20845150 - 20845080
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  20845150 gtttgaaggaggagaattaggaaatatagttaggttttgaaggagggaaaagtggccacaattttttaggt 20845080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 12651349 - 12651292
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12651349 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 12651292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 23178472 - 23178415
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23178472 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23178415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 23184401 - 23184344
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23184401 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 23184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 34757395 - 34757338
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34757395 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 34757338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 39874229 - 39874172
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39874229 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 39874172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 23180133 - 23180082
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaag 59  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23180133 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaag 23180082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32672895 - 32672849
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32672895 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 32672849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 3611853 - 3611910
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  3611853 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 3611910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 20109139 - 20109196
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  20109139 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 20109196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 20109907 - 20109964
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  20109907 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 20109964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 23179635 - 23179589
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23179635 gtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 23179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30094376 - 30094426
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  30094376 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 30094426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 32672046 - 32671996
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  32672046 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 32671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 23178730 - 23178673
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  23178730 gtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 23178673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 3611795 - 3611825
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  3611795 gtttggaggaggggaattaggaaatatggtt 3611825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 20844881 - 20844836
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||| |||||||||||| || ||| ||||||||||||    
T  20844881 atggttaggttttcaaggagggaaaaatgactacaattttttaggt 20844836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 8e-56; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 22673846 - 22673728
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  22673846 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagttggaattagggcaacaat 22673747  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  22673746 gttaggtttataaataaaa 22673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 41862244 - 41862362
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  41862244 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaacaat 41862343  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  41862344 gttaggtttataaataaaa 41862362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 52680272 - 52680154
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  52680272 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatattagttggaattagggcaacaat 52680173  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  52680172 gttaggtttataaataaaa 52680154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 41946761 - 41946885
Alignment:
Q  8 gtttggaggaggggaattaggaaatat--ggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaaca 105  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  41946761 gtttggaggaggggaattaggaaatatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattaggtggaattagggcaaca 41946860  T
Q  106 atgttaggtttataaataaaagatg 130  Q
    |||||||||||||||||||||||||    
T  41946861 atgttaggtttataaataaaagatg 41946885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 41862435 - 41862543
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||          |||||||||    
T  41862435 gtttggaggaggggaaatagaaaatatggttaggttttgaaagagggtaaagtggctataattttttaggttaaatattag----------ggcaacaat 41862524  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  41862525 gttaggtttataaataaaa 41862543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 16905893 - 16905836
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16905893 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 16905836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29363875 - 29363932
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29363875 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 29363932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 35756480 - 35756423
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35756480 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 35756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 42345174 - 42345117
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42345174 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42345117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 42345295 - 42345238
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42345295 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 42345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 21380377 - 21380325
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380377 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 21380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 53285700 - 53285650
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53285700 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 53285650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 28380315 - 28380258
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  28380315 gtttggaggaggggaattaggaaatatggttaggttttgaaggggggaaaagttgcta 28380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29363547 - 29363604
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29363547 gtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagttgcta 29363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29363754 - 29363811
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  29363754 gtttggaggaggggaattaggaaatatggttaggttttgaaggatggaaaagttgcta 29363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 22673939 - 22673893
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22673939 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41861971 - 41862017
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41861971 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41862062 - 41862108
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41862062 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41862153 - 41862199
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41862153 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 14148579 - 14148636
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  14148579 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 14148636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 30390848 - 30390905
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  30390848 gtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 30390905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 52679798 - 52679741
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  52679798 gtttggaggagggaaattaggaaatatggttaggttttgaaggagagaaaagttgcta 52679741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 53285820 - 53285763
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||    
T  53285820 gtttggaggaggggaattaggaaatatggttagattttgaaggaggaaaaagttgcta 53285763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41946579 - 41946625
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  41946579 gtttggaggaggggaattaggaaatatagttaggttttgaaggaggg 41946625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41946670 - 41946716
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41946670 gtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41946716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 52680363 - 52680317
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  52680363 gtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 52680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 14148433 - 14148490
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  14148433 gtttggaggaggagaattaggaaatatggttaggttttaaaggagagaaaagttgcta 14148490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 19518515 - 19518572
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  19518515 gtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 19518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 21585331 - 21585388
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||    
T  21585331 gtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaagttgcta 21585388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 25819740 - 25819683
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  25819740 gtttggaggaggagaattaggaaatatggttatgttttaaaggagggaaaagttgcta 25819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 41863184 - 41863241
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||    
T  41863184 gtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaagttgcta 41863241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 22673351 - 22673294
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||  |||||| ||||    
T  22673351 gtttggaggagggaaattaggaaatatggttaggttttgaaagagataaaagttgcta 22673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 22673726 - 22673689
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  22673726 gaaatatggttaggttttgaaggagggaaaagttgcta 22673689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 29363649 - 29363690
Alignment:
Q  24 ttaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  29363649 ttaggaaatatggttagattttgaaggagggaaaagttgcta 29363690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 14148521 - 14148551
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  14148521 gtttggaggaggggaattaggaaatatggtt 14148551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 19518457 - 19518487
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  19518457 gtttggaggaggggaattaggaaatatggtt 19518487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 21585273 - 21585303
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  21585273 gtttggaggaggggaattaggaaatatggtt 21585303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 25819798 - 25819768
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  25819798 gtttggaggaggggaattaggaaatatggtt 25819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 52680152 - 52680122
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||||||||||||||||||||||    
T  52680152 gaaatatggttaggttttgaaggagggaaaa 52680122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 26453447 - 26453329
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  26453447 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatattagttggaattagggcaacaat 26453348  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  26453347 gttaggtttataaataaaa 26453329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 40603283 - 40603165
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  40603283 gtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctataattttttaggttaaatattagttggaattagggcaacaat 40603184  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  40603183 gttaggtttataaataaaa 40603165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 13905810 - 13905694
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  13905810 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttgggttaaatattaggtggaattagggcaacaat 13905711  T
Q  108 gttaggtttataaataa 124  Q
    |||||||||||||||||    
T  13905710 gttaggtttataaataa 13905694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 13899912 - 13899794
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  13899912 gtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattcggtggaattagggcaacaat 13899813  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  13899812 gttaggtttataaataaaa 13899794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 1925675 - 1925796
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||| |||||||| ||||||| |    
T  1925675 gtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaagtatctacaattttttaggttaaatattaggtggaattagggcaacagt 1925774  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  1925775 gttaggtttataaataaaagat 1925796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 27999686 - 27999802
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||  |    
T  27999686 gtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacggt 27999785  T
Q  108 gttaggtttataaataa 124  Q
    |||||||||||||||||    
T  27999786 gttaggtttataaataa 27999802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 28090420 - 28090536
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||  |    
T  28090420 gtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacggt 28090519  T
Q  108 gttaggtttataaataa 124  Q
    |||||||||||||||||    
T  28090520 gttaggtttataaataa 28090536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 28096743 - 28096859
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||  |    
T  28096743 gtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacggt 28096842  T
Q  108 gttaggtttataaataa 124  Q
    |||||||||||||||||    
T  28096843 gttaggtttataaataa 28096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 35433171 - 35433287
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| |||||||      
T  35433171 gtttggaggaggggaattaagaaatatggttaggttttgaaggagggaaaagtggctacaactttttaggttaaatattaggtggaattagggcaaca-- 35433268  T
Q  108 gttaggtttataaataaaaga 128  Q
      |||||||||||||||||||    
T  35433269 --taggtttataaataaaaga 35433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 35433021 - 35433092
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  35433021 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatattttaggt 35433092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 1925526 - 1925596
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  1925526 gtttggagaaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctacaattttttaggt 1925596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 1501847 - 1501790
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1501847 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 1501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 19640963 - 19640906
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19640963 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19640906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 19839556 - 19839499
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19839556 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19839499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 32287468 - 32287404
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  32287468 gtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggttacaatttt 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 180263 - 180206
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  180263 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 180206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 980053 - 980110
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  980053 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 980506 - 980563
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  980506 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 980563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2444176 - 2444119
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2444176 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2444119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 5001150 - 5001207
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5001150 gtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5001207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 5012820 - 5012877
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5012820 gtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaagttgcta 5012877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 19641125 - 19641068
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19641125 gtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19641068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 19839718 - 19839661
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19839718 gtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 19839661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 26452952 - 26452895
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  26452952 gtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaagttgcta 26452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 27999854 - 27999931
Alignment:
Q  54 gaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaagatgg 131  Q
    ||||||||| || |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||| |||||||    
T  27999854 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagatgg 27999931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 28090588 - 28090665
Alignment:
Q  54 gaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaagatgg 131  Q
    ||||||||| || |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||| |||||||    
T  28090588 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagatgg 28090665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 28096911 - 28096988
Alignment:
Q  54 gaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgttaggtttataaataaaagatgg 131  Q
    ||||||||| || |||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||| |||||||    
T  28096911 gaaaagtggttacaattttttaggttaaatattaggtggaattagggcaacggtgttaggtttataaatagaagatgg 28096988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 36440133 - 36440190
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36440133 gtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagttgcta 36440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 32287329 - 32287265
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||    
T  32287329 gtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaaggggttacaatttt 32287265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 42111698 - 42111750
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42111698 gtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaagt 42111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 13905901 - 13905855
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13905901 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 13905855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 204417 - 204360
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  204417 gtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaagttgcta 204360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2297033 - 2296976
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  2297033 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 2296976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 13899153 - 13899096
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  13899153 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 13899096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 14039770 - 14039713
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  14039770 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 14039713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 25643794 - 25643737
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  25643794 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 25643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 40603373 - 40603325
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaa 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40603373 gtttggaggaggggaattaggaaatatggttaggttttaaaggagggaa 40603325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 26453538 - 26453492
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  26453538 gtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 26453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 6120894 - 6120837
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||||||| ||||    
T  6120894 gtttggaggaggagaattagaaaatatggttaggttttaaaggagggaaaagttgcta 6120837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 40602788 - 40602731
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||    
T  40602788 gtttggaggagggaaattagaaaatatggttagattttgaaggagggaaaagttgcta 40602731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 21591215 - 21591271
Alignment:
Q  9 tttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  21591215 tttgaaggaggggaattagagaatatggttaggttttgaaggagggaaaagttgcta 21591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 35433287 - 35433359
Alignment:
Q  39 aggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaatgtta 111  Q
    |||||||||||||| |||||||||||| || ||||||  ||||||||||| |||||||| ||||||| |||||    
T  35433287 aggttttgaaggagagaaaagtggctacaactttttaaattaaatattaggtggaattagggcaacagtgtta 35433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 1272014 - 1271964
Alignment:
Q  55 aaaagtggctataattttttaggttaaatattagatggaattaaggcaaca 105  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  1272014 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaaca 1271964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 13900105 - 13900052
Alignment:
Q  12 ggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||    
T  13900105 ggaggaggagaattaggaaatatggttaggttttaaaggatggaaaagttgcta 13900052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 26453327 - 26453290
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26453327 gaaatatggttaggttttgaaggagggaaaagttgcta 26453290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 32287065 - 32287012
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtg 61  Q
    ||||||||||| ||||| ||||||| | |||||||||| |||||||||||||||    
T  32287065 gtttggaggagaggaatcaggaaatgtagttaggttttaaaggagggaaaagtg 32287012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 40603163 - 40603126
Alignment:
Q  28 gaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40603163 gaaatatggttaggttttgaaggagggaaaagttgcta 40603126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 2297091 - 2297061
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  2297091 gtttggaggaggggaattaggaaatatggtt 2297061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 6120952 - 6120922
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  6120952 gtttggaggaggggaattaggaaatatggtt 6120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 25643852 - 25643822
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  25643852 gtttggaggaggggaattaggaaatatggtt 25643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 13899791 - 13899759
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||| ||||    
T  13899791 atggttaggttttgaaggagggaaaagttgcta 13899759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 7e-53; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 3589303 - 3589182
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  3589303 gtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaaatggctataattttttaggttaaatattaggtggaattagggcaacaat 3589204  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  3589203 gttaggtttataaataaaagat 3589182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 2271909 - 2271852
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2271909 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2271852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29374268 - 29374318
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29374268 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 29374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 33049750 - 33049807
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33049750 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 29371716 - 29371768
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagt 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29371716 gtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt 29371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 33007319 - 33007371
Alignment:
Q  13 gaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33007319 gaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 33007371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24456486 - 24456436
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24456486 gtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 24456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 29921083 - 29921026
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||| |||||| ||||    
T  29921083 gtttggaggaggagaattaggaaatatggttaggtttcaaaggaggaaaaagttgcta 29921026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 103; Significance: 5e-51; HSPs: 5)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 41244 - 41126
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||    
T  41244 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttttttggttaaatatttgttggaattagggcaacaat 41145  T
Q  108 gttaggtttataaataaaa 126  Q
    |||||||||||||||||||    
T  41144 gttaggtttataaataaaa 41126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 40882 - 40825
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||    
T  40882 gtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaagttgcta 40825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 41335 - 41289
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41335 gtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 41426 - 41380
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 54  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  41426 gtttggaggaggggaattagaaaatatggttaggttttgaaggaggg 41380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 41118 - 41086
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||| ||||    
T  41118 atggttaggttttgaaggagggaaaagttgcta 41086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 36136 - 36015
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggttaaatattagatggaattaaggcaacaat 107  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| |    
T  36136 gtttggaggatgggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaattttttaggttaaatattaggtggaattagggcaacagt 36037  T
Q  108 gttaggtttataaataaaagat 129  Q
    ||||||||||||||||||||||    
T  36036 gttaggtttataaataaaagat 36015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 36433 - 36363
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36433 gtttggaggaggggaattaggatatatggttaggttttgaaggagggaaaagtggctacaattttttaggt 36363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 36285 - 36215
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataattttttaggt 78  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  36285 gtttggaggaggggaattaggaaatatggttaggttttaaaggagggaaaagtgggtacaattttttaggt 36215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 19958127 - 19958069
Alignment:
Q  7 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19958127 agtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 19958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 18278560 - 18278617
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18278560 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 18278617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 24014145 - 24014202
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24014145 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 24014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 18489800 - 18489864
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctataatttt 72  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  18489800 gtttggaggaggggaattaggaaatatggttatgttttgaaggagggaaaagtgactacaatttt 18489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 18489988 - 18489931
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  18489988 gtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaagttgcta 18489931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 37985475 - 37985532
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  37985475 gtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 22732239 - 22732289
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22732239 gtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 22732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 21637119 - 21637062
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  21637119 gtttggaggagaggaattagggaatatggttaggttttgaaggagggaaaagttgcta 21637062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 410107 - 410164
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  410107 gtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgcta 410164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 37985586 - 37985634
Alignment:
Q  17 aggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  37985586 aggggaattaggaaatattgttaggttttgaaggagggaaaagttgcta 37985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 24011241 - 24011291
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  24011241 gtttggaggaggagaattatgaaatatggttagattttgaaggagggaaaa 24011291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 41377841 - 41377874
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttagg 41  Q
    ||||||||||||||||||||||||||||||||||    
T  41377841 gtttggaggaggggaattaggaaatatggttagg 41377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 410049 - 410079
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  410049 gtttggaggaggggaattaggaaatatggtt 410079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 2507 - 2564
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2507 gtttagaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 44663 - 44720
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44663 gtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaagttgcta 44720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 48828 - 48794
Alignment:
Q  24 ttaggaaatatggttaggttttgaaggagggaaaa 58  Q
    |||||||||||||||||||||||||| ||||||||    
T  48828 ttaggaaatatggttaggttttgaagaagggaaaa 48794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 51514 - 51546
Alignment:
Q  33 atggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||||||||||||||||||| ||||    
T  51514 atggttaggttttgaaggagggaaaagttgcta 51546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 360 - 303
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  360 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 418 - 388
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  418 gtttggaggaggggaattaggaaatatggtt 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 10271 - 10214
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  10271 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 10329 - 10299
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  10329 gtttggaggaggggaattaggaaatatggtt 10299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 28709 - 28766
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  28709 gtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaagttgcta 28766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 28651 - 28681
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  28651 gtttggaggaggggaattaggaaatatggtt 28681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 116 - 173
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggcta 65  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  116 gtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaagttgcta 173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 58 - 88
Alignment:
Q  8 gtttggaggaggggaattaggaaatatggtt 38  Q
    |||||||||||||||||||||||||||||||    
T  58 gtttggaggaggggaattaggaaatatggtt 88  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 29223 - 29273
Alignment:
Q  55 aaaagtggctataattttttaggttaaatattagatggaattaaggcaaca 105  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  29223 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaaca 29273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 35476 - 35526
Alignment:
Q  55 aaaagtggctataattttttaggttaaatattagatggaattaaggcaaca 105  Q
    ||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  35476 aaaagtggctacaattttttaggttaaatattaggtggaattagggcaaca 35526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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