View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2623-Insertion-8 (Length: 183)
Name: NF2623-Insertion-8
Description: NF2623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2623-Insertion-8 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 144; Significance: 6e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 35902774 - 35902627
Alignment:
| Q |
36 |
attatgaagttaataactcagcatcatatttgataaggtacttggccgtgcattgggaggaaaggtgggtcgctctcctactggttgggacattgatgtg |
135 |
Q |
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| T |
35902774 |
attatgaagttaataactcagcatcatatttgataaggtacttggccgtgcattgggaggaaaggtgggtcgctctcctactggttgggacattggtgtg |
35902675 |
T |
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| Q |
136 |
agaaccataacattgtcatcacatatttccttcccttctcttgatctt |
183 |
Q |
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| T |
35902674 |
agaaccataacattgtcatcacatatttccttcccttctcttgatctt |
35902627 |
T |
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Target: chr4 (Bit Score: 28; Significance: 0.0000009; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 37024140 - 37024207
Alignment:
| Q |
63 |
atttgataaggtacttggccgtgcattgggaggaaaggtgggtcgctctcctactggttgggacattg |
130 |
Q |
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| T |
37024140 |
atttgattagatacttggccgtgcaattggagggaaggtgactcgttctccaactggctgggacattg |
37024207 |
T |
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