View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2624R-Insertion-4 (Length: 252)
Name: NF2624R-Insertion-4
Description: NF2624R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2624R-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 3544819 - 3544574
Alignment:
| Q |
7 |
caaagccatcaagacaagtgttatcatcagtaagtgcagcactgacccaagtctgcacgttggtcatgtgccacacaaagtcctctccaacagcatgacc |
106 |
Q |
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| T |
3544819 |
caaagccatcaagacaagtgttatcatcagtaagtgcagcactgacccaagtctgcacgttggtcatgtgccacacaaagtcctctccaacagcatgacc |
3544720 |
T |
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| Q |
107 |
aatactgcctaactccctaaccgattggctaagactgtccaaactgtcacccatgttttctatgcagtcttgtacggctctgtactcccttggcttgatg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3544719 |
aatactgcctaactccctaaccgattggctaagactgtccaaactgtcacccatgttttctatgcagtcttgtacggctctgtactcccttggcttgatg |
3544620 |
T |
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| Q |
207 |
cctcttgcttttgatatcttctttacaaatgatgcactcgatcgtg |
252 |
Q |
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| T |
3544619 |
cctcttgcttttgatatcttctttacaaacgatgcactcgatcgtg |
3544574 |
T |
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