View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2624_high_5 (Length: 287)
Name: NF2624_high_5
Description: NF2624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2624_high_5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 6202979 - 6203256
Alignment:
| Q |
10 |
ataatactcctcataagcatcaagtatgtaaaaaggcaacgacccctctggctccaaattaaactccgtctgttgttgattattcgtatcagcaacattt |
109 |
Q |
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| T |
6202979 |
ataatactcctcataagcatcaagtatgtaaaaaggcaacgacccctctggctccaaattaaactccgtctgttgttgattattcgtatcagcaacattt |
6203078 |
T |
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| Q |
110 |
acctccccacctccacctccaccactcctagccgcctgccatccagccgtagcacacaacttcggatccaccgcttcttcactaactttcgcattcaaag |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6203079 |
acctccccacctccacctccaccactcctagccgcctgccatccagccgtagcacacaacttcggatccaccgcttcttcactaactttcgcattcaaag |
6203178 |
T |
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| Q |
210 |
taaaaccctcctttttcacaacaggtttcacttccatttcttcgtctttcacatacgccactttctcttcaactaaat |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6203179 |
taaaaccctcctttttcacaacaggtttcacttccatttcttcgtctttcacatacgccactttctcttcaactaaat |
6203256 |
T |
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