View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2624_low_7 (Length: 240)
Name: NF2624_low_7
Description: NF2624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2624_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 6203260 - 6203480
Alignment:
| Q |
3 |
cgttaccacattcattgtcttccaccgccattcctccctcgcaatttcccaaactctcattcacttctacttcactcttttccactaaccctaacctaga |
102 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6203260 |
cgttaccacattcattgtcttccaccaccattcctccctcgcaatttcccaaactctcattcacttctacttcactcttttccactaaccctaacctaga |
6203359 |
T |
|
| Q |
103 |
tccattatccttatccttattaaccctaacagattcaacttcaccatttccaccattaccaattttcgtgaaattttcactcgcaaaagagcctaataca |
202 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6203360 |
tccattatccctatccttattaaccctaacagattcaacttcaccatttccacgattaccaattttcgtgaaattttcactcgcaaaagagcctaataca |
6203459 |
T |
|
| Q |
203 |
gattcagcagagggcttaggt |
223 |
Q |
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||||||||||||||||||||| |
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| T |
6203460 |
gattcagcagagggcttaggt |
6203480 |
T |
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