View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2627_low_1 (Length: 545)

Name: NF2627_low_1
Description: NF2627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2627_low_1
NF2627_low_1
[»] chr4 (5 HSPs)
chr4 (236-532)||(55330669-55330965)
chr4 (1-184)||(55331017-55331200)
chr4 (236-422)||(55336217-55336403)
chr4 (85-187)||(55336449-55336551)
chr4 (477-529)||(55336104-55336156)
[»] chr2 (25 HSPs)
chr2 (240-527)||(8375852-8376139)
chr2 (240-527)||(8395535-8395825)
chr2 (311-527)||(8411867-8412083)
chr2 (311-527)||(8433965-8434181)
chr2 (248-413)||(8431120-8431285)
chr2 (240-527)||(8405747-8406037)
chr2 (240-400)||(8439091-8439251)
chr2 (311-523)||(8416952-8417164)
chr2 (311-397)||(8417215-8417301)
chr2 (84-185)||(8395391-8395492)
chr2 (84-185)||(8406080-8406181)
chr2 (240-418)||(8403900-8404078)
chr2 (84-185)||(8439297-8439398)
chr2 (481-527)||(8368118-8368164)
chr2 (110-172)||(8368479-8368541)
chr2 (110-172)||(8400869-8400931)
chr2 (481-527)||(8401246-8401292)
chr2 (87-133)||(8404185-8404231)
chr2 (110-172)||(8422446-8422508)
chr2 (481-527)||(8422823-8422869)
chr2 (481-527)||(8431018-8431064)
chr2 (84-185)||(8375705-8375806)
chr2 (84-185)||(8412200-8412301)
chr2 (84-185)||(8434298-8434399)
chr2 (481-529)||(8403789-8403837)


Alignment Details
Target: chr4 (Bit Score: 285; Significance: 1e-159; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 236 - 532
Target Start/End: Complemental strand, 55330965 - 55330669
Alignment:
Q  236 tagtaataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaat 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55330965 tagtaataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaatgaaagatattgaagattatgaaagacttggaaat 55330866  T
Q  336 atagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaacaattctgttgcag 435  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55330865 atagcattaaaggttaataagagtttagcaactgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaacaattctgttgcag 55330766  T
Q  436 ctatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatggtatttgaaatgtatagaaattg 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55330765 ctatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatggtatttgaaatgtatagaaattg 55330669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 55331200 - 55331017
Alignment:
Q  1 caagattattcaaacatcttcgaagccaaatcgaaaacacagttgctcttggaaatcaaacagaacaagatgtgaagtgtttcatggagaaagttttggc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55331200 caagattattcaaacatcttcgaagccaaatcgaaaacacagttgctcttggaaatcaaacagaacaagatgtgaagtgtttcatggagaaagttttggc 55331101  T
Q  101 acttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggcc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55331100 acttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggcc 55331017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 236 - 422
Target Start/End: Complemental strand, 55336403 - 55336217
Alignment:
Q  236 tagtaataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaat 335  Q
    |||||| |||||||||||||| |||||||||| |||| |||| ||||||||||||||||| || |  ||||| |||||||| ||||| ||||||||||||    
T  55336403 tagtaaaaatggatggagtgaagaattagaaatggaaatgagggaagttattgaagttgtaaagagtaaagacattgaagactatgagagacttggaaat 55336304  T
Q  336 atagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaac 422  Q
    |||||||| ||| ||||||||||| | ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55336303 atagcattgaagattaacaagagtatggcaatagcaggtccattactcactggaattgcagcaataggttctgcatttgtaggaaac 55336217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 55336551 - 55336449
Alignment:
Q  85 tggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggcc 184  Q
    |||||||||| |||||||||||||||||||||||||||||| | ||||| | |||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  55336551 tggagaaagtgttggcacttgacaaagcttatccacttcctctgttaggagctatgcttgaaaagtttcctgcaaaatatgaaccttctgtttggtggcc 55336452  T
Q  185 tgc 187  Q
    |||    
T  55336451 tgc 55336449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 529
Target Start/End: Complemental strand, 55336156 - 55336104
Alignment:
Q  477 aatgcttttgaacatggtggacaaattggtatggtatttgaaatgtatagaaa 529  Q
    |||| |||||| |||||||||||| |||||||||| |||||||||||||||||    
T  55336156 aatggttttgagcatggtggacaagttggtatggtgtttgaaatgtatagaaa 55336104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 240 - 527
Target Start/End: Original strand, 8375852 - 8376139
Alignment:
Q  240 aataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatag 339  Q
    |||||||| |||||| | ||||| |||| |||| |||| |||||| |||||||  | || |  |||||   |||||||||||| ||||||||||| ||||    
T  8375852 aataatgggtggagtaaagaattggaaatggaaatgagggaagttgttgaagtgataaagagaaaagacgctgaagattatgacagacttggaaacatag 8375951  T
Q  340 cattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaacaattctgttgcagctat 439  Q
    |||| ||||| ||||||||||| |||||||| || ||||| ||||| |||||||||||||| || ||  |||||||||| |    |||| | || ||| |    
T  8375952 cattgaaggtaaacaagagtttggcaattgcagggccattgctcacaggaattgcagctattggatcgacatttgtaggtagtggttctttggctgcttt 8376051  T
Q  440 agttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
     ||| || |  ||||||||||||| | | ||||| | ||| ||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  8376052 tgttcctcttttggctggttcattggcttctgtaattaatacttttgagcatggtggacaagttggcatggtttttgaaatgtataga 8376139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 527
Target Start/End: Original strand, 8395535 - 8395825
Alignment:
Q  240 aataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatag 339  Q
    ||||||||||||||||| ||||| |||| |||| |||| |||||| |||| || || |||   |||||   |||||||||||| ||||||||||| ||||    
T  8395535 aataatggatggagtgaagaattggaaatggaaatgagggaagttgttgacgtggtaaaacgaaaagacgctgaagattatgacagacttggaaacatag 8395634  T
Q  340 cattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaa---caattctgttgcagc 436  Q
    | || ||||| ||||||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| ||||| | || ||    | |||| | || ||    
T  8395635 ctttgaaggtaaacaagagtttggcaattgcagggccattgctcacaggaattgcagctattggatctacatttattggcaatggtagttctttggctgc 8395734  T
Q  437 tatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
      | ||| || |  ||||||||||||| | | ||| | | ||| ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  8395735 atttgttcctctcttggctggttcattggcttctgcaataaatacttttgaacatggtggacaaattggcatggtttttgaaatgtataga 8395825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 311 - 527
Target Start/End: Complemental strand, 8412083 - 8411867
Alignment:
Q  311 tgaagattatgaaagacttggaaatatagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgca 410  Q
    |||||||||||| ||||||||||| ||||| || ||||| ||||||||||| |||||||| || ||||||||||| ||||||||||| || || ||| ||    
T  8412083 tgaagattatgacagacttggaaacatagcgttgaaggtaaacaagagtttggcaattgcagggccattactcacaggaattgcagcaattggatctaca 8411984  T
Q  411 tttgtaggaaacaattctgttgcagctatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatgg 510  Q
    |||||||| || | |||| | || ||  | ||| || || || |||||||||| | | |||  || ||| ||||||| |||||||||||| |||| ||||    
T  8411983 tttgtaggcaatagttctttggctgcatttgttcctctattgactggttcattggcttctgctgttaatacttttgagcatggtggacaagttggcatgg 8411884  T
Q  511 tatttgaaatgtataga 527  Q
    | |||||||||||||||    
T  8411883 tttttgaaatgtataga 8411867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 311 - 527
Target Start/End: Complemental strand, 8434181 - 8433965
Alignment:
Q  311 tgaagattatgaaagacttggaaatatagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgca 410  Q
    |||||||||||| ||||||||||| ||||| || ||||| ||||||||||| |||||||| || ||||||||||| ||||||||||| || || ||| ||    
T  8434181 tgaagattatgacagacttggaaacatagcgttgaaggtaaacaagagtttggcaattgcagggccattactcacaggaattgcagcaattggatctaca 8434082  T
Q  411 tttgtaggaaacaattctgttgcagctatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatgg 510  Q
    |||||||| || | |||| | || ||  | ||| || || || |||||||||| | | |||  || ||| ||||||| |||||||||||| |||| ||||    
T  8434081 tttgtaggcaatagttctttggctgcatttgttcctctattgactggttcattggcttctgctgttaatacttttgagcatggtggacaagttggcatgg 8433982  T
Q  511 tatttgaaatgtataga 527  Q
    | |||||||||||||||    
T  8433981 tttttgaaatgtataga 8433965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 248 - 413
Target Start/End: Complemental strand, 8431285 - 8431120
Alignment:
Q  248 atggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatagcattaaag 347  Q
    ||||||||| |||||||||| |||| |||| || ||| |||||||  | || |  |||||  ||||||||||||| ||||||||||| |||||||| |||    
T  8431285 atggagtgaagaattagaaatggaaatgagggatgttgttgaagtgataaagagaaaagacgttgaagattatgatagacttggaaacatagcattgaag 8431186  T
Q  348 gttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcattt 413  Q
    || ||||||||||| |||||||| || ||||||||| | ||||||||||||||||| ||| |||||    
T  8431185 gtaaacaagagtttggcaattgcagggccattactctcaggaattgcagctataggatctacattt 8431120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 240 - 527
Target Start/End: Complemental strand, 8406037 - 8405747
Alignment:
Q  240 aataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatag 339  Q
    ||||||||||||||||| ||||| |||| |||| |||| |||||| |||| || || |||   |||||   |||||||||||| ||||||||||| ||||    
T  8406037 aataatggatggagtgaagaattggaaatggaaatgagggaagttgttgacgtggtaaaacgaaaagacgctgaagattatgacagacttggaaacatag 8405938  T
Q  340 cattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtaggaaa---caattctgttgcagc 436  Q
    | || ||||| ||||||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| ||||| | || ||    | |||| | || ||    
T  8405937 ctttgaaggtaaacaagagtttggcaattgcagggccattgctcacaggaattgcagctattggatctacatttattggcaatggtagttctttggctgc 8405838  T
Q  437 tatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
      | ||| || |  ||||||||||||| | | ||| | | ||| |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  8405837 atttgttcctctcttggctggttcattggcttctgcaatcaatacttttgaacatggtggacaagttggcatggtttttgaaatgtataga 8405747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 400
Target Start/End: Complemental strand, 8439251 - 8439091
Alignment:
Q  240 aataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatag 339  Q
    |||||||| |||||| | ||||| |||| |||| |||| |||||| |||||||  | || |  |||||   |||||||||||| ||||||||||| ||||    
T  8439251 aataatgggtggagtaaagaattggaaatggaaatgagggaagttgttgaagtgataaagagaaaagacgctgaagattatgacagacttggaaacatag 8439152  T
Q  340 cattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctat 400  Q
    |||| ||||| ||||||||||| |||||||| || ||||| ||||| ||||||||||||||    
T  8439151 cattgaaggtaaacaagagtttggcaattgcagggccattgctcacaggaattgcagctat 8439091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 523
Target Start/End: Complemental strand, 8417164 - 8416952
Alignment:
Q  311 tgaagattatgaaagacttggaaatatagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgca 410  Q
    |||||||||| | || |||||||| ||||| || |||||  ||||||||||||||||||| || ||||||||||| |||||||| ||||| || ||| ||    
T  8417164 tgaagattataacaggcttggaaacatagctttgaaggtagacaagagtttagcaattgcagggccattactcacaggaattgccgctattggatctaca 8417065  T
Q  411 tttgtaggaaacaattctgttgcagctatagttgctttaatggctggttcattaggtgctgtagtgaatgcttttgaacatggtggacaaattggtatgg 510  Q
    ||| |||| ||    ||| | || ||  | ||| || || ||||||||||||| | | ||| ||| ||| ||||||| |||||||||||| |||| ||||    
T  8417064 tttataggcaatggctctttggctgcctttgttcctctattggctggttcattggcttctgcagttaatacttttgagcatggtggacaagttggcatgg 8416965  T
Q  511 tatttgaaatgta 523  Q
    | |||||||||||    
T  8416964 tttttgaaatgta 8416952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 397
Target Start/End: Complemental strand, 8417301 - 8417215
Alignment:
Q  311 tgaagattatgaaagacttggaaatatagcattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagc 397  Q
    |||||||||||| ||||||||||| ||||| || ||||| ||||||||||| |||||||| || ||||||||||| |||||||||||    
T  8417301 tgaagattatgacagacttggaaacatagcgttgaaggtaaacaagagtttggcaattgcagggccattactcacaggaattgcagc 8417215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 8395391 - 8395492
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| |||||||| |  |||||||||||||  |||||||||| | | ||||||  ||||||||    
T  8395391 atggaaaaagttttggcccttgacaaagcatatccacttccattattaggagcaatgcttgaaaaataccctgcaaaatttgagcctgctacttggtggc 8395490  T
Q  184 ct 185  Q
    ||    
T  8395491 ct 8395492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 8406181 - 8406080
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| |||||||| |  |||||||||||||  |||||||||| | | ||||||  ||||||||    
T  8406181 atggaaaaagttttggcccttgacaaagcatatccacttccattattaggagcaatgcttgaaaaataccctgcaaaatttgagcctgctacttggtggc 8406082  T
Q  184 ct 185  Q
    ||    
T  8406081 ct 8406080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 418
Target Start/End: Complemental strand, 8404078 - 8403900
Alignment:
Q  240 aataatggatggagtgaggaattagaaaaggaattgagagaagttattgaagttgtgaaaaagaaagatattgaagattatgaaagacttggaaatatag 339  Q
    ||||||||||||| |  ||| || ||||| ||| |||  || || |||||||| ||||| |  ||||||||||| |||||||| ||| | || ||||| |    
T  8404078 aataatggatggaatttggagttggaaaatgaaatgaaggaggtaattgaagtggtgaagagaaaagatattgaggattatgagagattagggaatattg 8403979  T
Q  340 cattaaaggttaacaagagtttagcaattgctggtccattactcactggaattgcagctataggttctgcatttgtagg 418  Q
    |||||||| ||||||||||||||||||||   || || ||  | || ||||||||||||||||| ||  ||||||||||    
T  8403978 cattaaagattaacaagagtttagcaattttaggacctttgttaacaggaattgcagctatagggtcatcatttgtagg 8403900  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 8439398 - 8439297
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| || |||||||||||||| ||||| || || ||||||||||| || |  |||||||||||||  ||| |||||| | ||||||||  ||||||||    
T  8439398 atggaaaaggttttggcacttgataaagcataccctcttcctttattgggagcaatgcttgaaaaatacccttcaaaatttgaacctgctaattggtggc 8439299  T
Q  184 ct 185  Q
    ||    
T  8439298 ct 8439297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 527
Target Start/End: Complemental strand, 8368164 - 8368118
Alignment:
Q  481 cttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||||    
T  8368164 cttttgagcatggtggacaagttggtatggtttctgaaatgtataga 8368118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 8368541 - 8368479
Alignment:
Q  110 agcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgc 172  Q
    |||||||||||| ||||| ||||| |||||| |||||||||| |||  ||||||| |||||||    
T  8368541 agcttatccactacctttgttaggagttatgattgaaaaattccctcaaaaatatgaacctgc 8368479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 8400869 - 8400931
Alignment:
Q  110 agcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgc 172  Q
    |||||||||||| ||||| ||||| |||||| |||||||||| |||  ||||||| |||||||    
T  8400869 agcttatccactacctttgttaggagttatgattgaaaaattccctcaaaaatatgaacctgc 8400931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 527
Target Start/End: Original strand, 8401246 - 8401292
Alignment:
Q  481 cttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||||    
T  8401246 cttttgagcatggtggacaagttggtatggtttctgaaatgtataga 8401292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 8404231 - 8404185
Alignment:
Q  87 gagaaagttttggcacttgacaaagcttatccacttcctttattagg 133  Q
    ||||| |||||||| ||||| ||||| ||||||||||||||||||||    
T  8404231 gagaaggttttggctcttgataaagcctatccacttcctttattagg 8404185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 8422446 - 8422508
Alignment:
Q  110 agcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgc 172  Q
    |||||||||||| ||||| ||||| |||||| |||||||||| |||  ||||||| |||||||    
T  8422446 agcttatccactacctttgttaggagttatgattgaaaaattccctcaaaaatatgaacctgc 8422508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 527
Target Start/End: Original strand, 8422823 - 8422869
Alignment:
Q  481 cttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
    ||||||| |||||||||||| |||||||||| | |||||||||||||    
T  8422823 cttttgagcatggtggacaagttggtatggtttctgaaatgtataga 8422869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 527
Target Start/End: Complemental strand, 8431064 - 8431018
Alignment:
Q  481 cttttgaacatggtggacaaattggtatggtatttgaaatgtataga 527  Q
    ||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  8431064 cttttgagcatggtggacaagttggcatggtttttgaaatgtataga 8431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Original strand, 8375705 - 8375806
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| || ||||||||| |||| ||||| || || ||||||||||| || |  |||||||||||||  ||| |||||| | ||||||||  ||||||||    
T  8375705 atggaaaaggttttggcaattgataaagcataccctcttcctttattgggagcaatgcttgaaaaatacccttcaaaatttgaacctgctaattggtggc 8375804  T
Q  184 ct 185  Q
    ||    
T  8375805 ct 8375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 8412301 - 8412200
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| || ||||||||| |||| ||||| || || ||||||||||| || |  |||||||||||||  ||| |||||| | ||||||||  ||||||||    
T  8412301 atggaaaaggttttggcaattgataaagcataccctcttcctttattgggagcaatgcttgaaaaatacccttcaaaatttgaacctgctaattggtggc 8412202  T
Q  184 ct 185  Q
    ||    
T  8412201 ct 8412200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 8434399 - 8434298
Alignment:
Q  84 atggagaaagttttggcacttgacaaagcttatccacttcctttattaggtgttatgcttgaaaaatttcctgcaaaatataaacctgctgtttggtggc 183  Q
    ||||| || ||||||||| |||| ||||| || || ||||||||||| || |  |||||||||||||  ||| |||||| | ||||||||  ||||||||    
T  8434399 atggaaaaggttttggcaattgataaagcataccctcttcctttattgggagcaatgcttgaaaaatacccttcaaaatttgaacctgctaattggtggc 8434300  T
Q  184 ct 185  Q
    ||    
T  8434299 ct 8434298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 529
Target Start/End: Complemental strand, 8403837 - 8403789
Alignment:
Q  481 cttttgaacatggtggacaaattggtatggtatttgaaatgtatagaaa 529  Q
    ||||||| ||||| |||||| |||||||||| ||||| |||||||||||    
T  8403837 cttttgagcatggaggacaagttggtatggtgtttgagatgtatagaaa 8403789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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