View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2629R-Insertion-2 (Length: 941)

Name: NF2629R-Insertion-2
Description: NF2629R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2629R-Insertion-2
NF2629R-Insertion-2
[»] chr6 (22 HSPs)
chr6 (9-627)||(6858403-6859021)
chr6 (13-470)||(6105960-6106417)
chr6 (9-459)||(6129482-6129932)
chr6 (640-807)||(20701703-20701870)
chr6 (642-766)||(13423482-13423606)
chr6 (683-838)||(3880467-3880622)
chr6 (680-766)||(15120538-15120624)
chr6 (639-776)||(26215950-26216087)
chr6 (639-803)||(32935243-32935407)
chr6 (639-766)||(26534656-26534787)
chr6 (641-709)||(3117508-3117576)
chr6 (639-766)||(9224054-9224182)
chr6 (640-729)||(21266127-21266216)
chr6 (649-773)||(13098505-13098629)
chr6 (650-773)||(33968549-33968670)
chr6 (641-681)||(34105428-34105468)
chr6 (643-709)||(21265003-21265069)
chr6 (643-704)||(16510304-16510365)
chr6 (639-681)||(34090376-34090418)
chr6 (643-711)||(12794131-12794200)
chr6 (641-726)||(15944034-15944120)
chr6 (639-672)||(7546464-7546497)
[»] chr8 (28 HSPs)
chr8 (641-837)||(17656872-17657068)
chr8 (641-766)||(10248494-10248619)
chr8 (639-709)||(24995393-24995463)
chr8 (639-716)||(30236119-30236196)
chr8 (639-707)||(15906699-15906767)
chr8 (639-789)||(12197986-12198137)
chr8 (639-789)||(12442414-12442565)
chr8 (639-863)||(31207205-31207430)
chr8 (643-709)||(9519516-9519582)
chr8 (639-709)||(34389003-34389073)
chr8 (639-829)||(15821255-15821447)
chr8 (641-773)||(17720640-17720771)
chr8 (643-711)||(32945699-32945767)
chr8 (646-709)||(16457459-16457522)
chr8 (639-766)||(35062470-35062597)
chr8 (639-710)||(36630850-36630921)
chr8 (639-709)||(32066293-32066363)
chr8 (639-709)||(37986856-37986926)
chr8 (639-709)||(41893399-41893468)
chr8 (639-712)||(10552281-10552354)
chr8 (648-744)||(20138448-20138545)
chr8 (674-803)||(8862505-8862635)
chr8 (643-711)||(41791260-41791328)
chr8 (639-675)||(33967339-33967375)
chr8 (639-675)||(40531245-40531281)
chr8 (639-681)||(12898300-12898342)
chr8 (641-674)||(36796621-36796654)
chr8 (657-710)||(38577787-38577840)
[»] chr7 (39 HSPs)
chr7 (638-838)||(8745165-8745365)
chr7 (641-862)||(24324640-24324864)
chr7 (639-868)||(6716575-6716804)
chr7 (639-794)||(1320807-1320963)
chr7 (639-867)||(34389975-34390204)
chr7 (639-802)||(42533158-42533320)
chr7 (641-829)||(3478367-3478555)
chr7 (639-707)||(13311852-13311920)
chr7 (639-709)||(10244195-10244265)
chr7 (639-744)||(6584922-6585029)
chr7 (641-711)||(12480901-12480971)
chr7 (639-709)||(38306274-38306344)
chr7 (639-863)||(47325728-47325953)
chr7 (641-710)||(3867131-3867200)
chr7 (641-709)||(3419654-3419722)
chr7 (639-794)||(38485569-38485723)
chr7 (656-766)||(36449113-36449224)
chr7 (639-773)||(48058588-48058722)
chr7 (639-709)||(9349762-9349832)
chr7 (639-720)||(16954666-16954748)
chr7 (639-762)||(41089691-41089816)
chr7 (639-711)||(11379122-11379195)
chr7 (639-766)||(46133217-46133346)
chr7 (639-718)||(16828924-16829004)
chr7 (639-695)||(33435122-33435178)
chr7 (641-709)||(37795004-37795072)
chr7 (639-710)||(35745824-35745895)
chr7 (639-773)||(47456956-47457090)
chr7 (648-744)||(44353526-44353623)
chr7 (639-711)||(23983208-23983280)
chr7 (642-709)||(5860286-5860353)
chr7 (699-766)||(44755662-44755729)
chr7 (639-707)||(9428105-9428173)
chr7 (639-675)||(46262151-46262187)
chr7 (639-672)||(17802851-17802884)
chr7 (639-675)||(27993568-27993604)
chr7 (639-675)||(35206725-35206761)
chr7 (655-773)||(22568045-22568164)
chr7 (650-744)||(48161986-48162083)
[»] chr4 (40 HSPs)
chr4 (650-879)||(41117792-41118024)
chr4 (639-879)||(38637058-38637300)
chr4 (639-838)||(25753185-25753384)
chr4 (639-805)||(53823322-53823489)
chr4 (640-797)||(39420923-39421080)
chr4 (694-867)||(49528140-49528315)
chr4 (639-809)||(22811058-22811228)
chr4 (650-868)||(16832858-16833078)
chr4 (644-805)||(48098351-48098512)
chr4 (639-767)||(2061678-2061806)
chr4 (642-863)||(2825799-2826020)
chr4 (654-867)||(35341179-35341391)
chr4 (639-773)||(38929840-38929974)
chr4 (639-737)||(49747540-49747638)
chr4 (639-744)||(8255040-8255146)
chr4 (639-744)||(8268458-8268564)
chr4 (641-711)||(16501746-16501816)
chr4 (639-805)||(19815122-19815292)
chr4 (639-862)||(31050505-31050730)
chr4 (639-766)||(35800502-35800629)
chr4 (639-710)||(28966880-28966951)
chr4 (639-709)||(4305738-4305808)
chr4 (639-744)||(30964454-30964560)
chr4 (639-716)||(6599936-6600013)
chr4 (639-695)||(46698797-46698853)
chr4 (661-829)||(19673135-19673303)
chr4 (643-695)||(30167576-30167628)
chr4 (639-737)||(12296188-12296286)
chr4 (639-681)||(39041300-39041342)
chr4 (639-684)||(21387227-21387272)
chr4 (639-707)||(24740103-24740171)
chr4 (639-695)||(36962628-36962683)
chr4 (639-675)||(40813813-40813849)
chr4 (671-773)||(21983755-21983857)
chr4 (646-695)||(2792286-2792335)
chr4 (639-672)||(53756769-53756802)
chr4 (639-687)||(19311363-19311410)
chr4 (641-681)||(26474851-26474891)
chr4 (639-670)||(37707392-37707423)
chr4 (638-676)||(12296060-12296098)
[»] chr3 (32 HSPs)
chr3 (639-868)||(14879448-14879680)
chr3 (641-828)||(39021155-39021342)
chr3 (645-809)||(25647703-25647869)
chr3 (641-836)||(37123397-37123590)
chr3 (639-764)||(33143891-33144017)
chr3 (639-812)||(14755159-14755333)
chr3 (641-867)||(23328189-23328416)
chr3 (639-869)||(19176515-19176748)
chr3 (643-776)||(1652817-1652950)
chr3 (639-709)||(17550970-17551040)
chr3 (639-829)||(40023448-40023640)
chr3 (642-710)||(47945722-47945790)
chr3 (644-794)||(823347-823498)
chr3 (639-722)||(14193953-14194038)
chr3 (639-751)||(5556583-5556696)
chr3 (639-710)||(43012388-43012459)
chr3 (655-766)||(27398987-27399099)
chr3 (639-710)||(9584050-9584121)
chr3 (700-838)||(28937584-28937721)
chr3 (640-744)||(2392468-2392573)
chr3 (644-709)||(20611801-20611866)
chr3 (639-836)||(45398809-45399008)
chr3 (643-738)||(45163872-45163968)
chr3 (639-678)||(34475783-34475822)
chr3 (736-878)||(4170855-4170999)
chr3 (639-689)||(24099345-24099395)
chr3 (641-711)||(30935386-30935456)
chr3 (640-705)||(2394255-2394320)
chr3 (639-695)||(30127275-30127332)
chr3 (639-675)||(20710740-20710776)
chr3 (639-686)||(31424249-31424296)
chr3 (812-869)||(7105029-7105085)
[»] chr5 (29 HSPs)
chr5 (639-838)||(7195110-7195307)
chr5 (656-838)||(8297498-8297680)
chr5 (639-766)||(13954175-13954302)
chr5 (639-868)||(26045802-26046032)
chr5 (639-768)||(14302369-14302498)
chr5 (639-838)||(33258751-33258950)
chr5 (641-794)||(21402749-21402903)
chr5 (639-793)||(7391950-7392099)
chr5 (639-768)||(25992020-25992149)
chr5 (639-709)||(22675322-22675392)
chr5 (639-709)||(34378111-34378181)
chr5 (639-773)||(39184119-39184255)
chr5 (643-710)||(27713086-27713153)
chr5 (643-708)||(18593260-18593325)
chr5 (639-709)||(698374-698444)
chr5 (639-773)||(24072201-24072334)
chr5 (641-803)||(17853971-17854133)
chr5 (655-764)||(39024385-39024502)
chr5 (639-711)||(8730930-8731003)
chr5 (247-296)||(11754403-11754452)
chr5 (247-296)||(11790544-11790593)
chr5 (247-296)||(11834761-11834810)
chr5 (247-296)||(11882373-11882422)
chr5 (644-705)||(31721695-31721756)
chr5 (245-349)||(11919224-11919328)
chr5 (639-707)||(23426357-23426425)
chr5 (641-679)||(12046270-12046308)
chr5 (247-296)||(11748144-11748193)
chr5 (639-744)||(29087494-29087601)
[»] chr2 (35 HSPs)
chr2 (648-879)||(7695985-7696218)
chr2 (639-805)||(1269496-1269663)
chr2 (643-868)||(10173418-10173642)
chr2 (644-805)||(34230219-34230380)
chr2 (639-779)||(13337287-13337427)
chr2 (647-868)||(16952222-16952443)
chr2 (647-868)||(17022887-17023108)
chr2 (647-868)||(17060193-17060414)
chr2 (641-829)||(37770520-37770707)
chr2 (639-867)||(7874304-7874532)
chr2 (639-773)||(15126344-15126478)
chr2 (639-773)||(22885067-22885201)
chr2 (639-863)||(39338708-39338933)
chr2 (692-838)||(41086665-41086812)
chr2 (639-865)||(14405211-14405439)
chr2 (639-766)||(2062902-2063029)
chr2 (639-708)||(16959995-16960064)
chr2 (639-773)||(4471936-4472069)
chr2 (639-867)||(14106361-14106592)
chr2 (647-737)||(17079190-17079281)
chr2 (641-794)||(18681080-18681233)
chr2 (639-764)||(33788575-33788700)
chr2 (639-738)||(387186-387288)
chr2 (639-766)||(31902355-31902482)
chr2 (643-867)||(5254273-5254493)
chr2 (639-773)||(27739988-27740122)
chr2 (639-709)||(10524110-10524184)
chr2 (814-897)||(13337448-13337534)
chr2 (639-711)||(25504904-25504977)
chr2 (639-675)||(4162052-4162088)
chr2 (639-685)||(23650398-23650444)
chr2 (641-675)||(9560820-9560854)
chr2 (647-701)||(27880135-27880189)
chr2 (644-694)||(42048229-42048279)
chr2 (643-672)||(23665439-23665468)
[»] chr1 (36 HSPs)
chr1 (645-809)||(27102210-27102373)
chr1 (639-805)||(6583118-6583284)
chr1 (639-820)||(34774884-34775067)
chr1 (640-751)||(32864517-32864628)
chr1 (637-879)||(10785286-10785529)
chr1 (697-806)||(31290920-31291029)
chr1 (639-867)||(24658942-24659170)
chr1 (639-744)||(41920465-41920571)
chr1 (643-860)||(27031687-27031904)
chr1 (639-867)||(7857666-7857895)
chr1 (641-804)||(16147570-16147736)
chr1 (639-772)||(19598649-19598782)
chr1 (639-709)||(31585758-31585828)
chr1 (639-709)||(46692817-46692887)
chr1 (639-836)||(46814336-46814535)
chr1 (639-711)||(17033599-17033672)
chr1 (639-794)||(4651793-4651947)
chr1 (645-709)||(5389419-5389483)
chr1 (643-709)||(30685902-30685968)
chr1 (641-744)||(24449892-24449996)
chr1 (704-838)||(9313177-9313310)
chr1 (639-744)||(24684439-24684546)
chr1 (639-687)||(38544758-38544806)
chr1 (642-778)||(50589136-50589272)
chr1 (639-709)||(5459174-5459244)
chr1 (643-689)||(9313307-9313353)
chr1 (717-803)||(16577352-16577438)
chr1 (639-681)||(15840938-15840980)
chr1 (639-773)||(42374176-42374311)
chr1 (643-681)||(30655577-30655615)
chr1 (639-761)||(27905425-27905542)
chr1 (639-692)||(46603405-46603458)
chr1 (724-803)||(41126379-41126458)
chr1 (649-707)||(9081506-9081563)
chr1 (638-680)||(42374048-42374090)
chr1 (716-805)||(32882463-32882552)
[»] scaffold0200 (1 HSPs)
scaffold0200 (639-805)||(19396-19563)
[»] scaffold0119 (1 HSPs)
scaffold0119 (639-805)||(42039-42206)
[»] scaffold0063 (1 HSPs)
scaffold0063 (641-829)||(58142-58330)
[»] scaffold0050 (1 HSPs)
scaffold0050 (639-809)||(36720-36892)
[»] scaffold1613 (1 HSPs)
scaffold1613 (639-687)||(1037-1085)
[»] scaffold0068 (1 HSPs)
scaffold0068 (643-738)||(35740-35835)
[»] scaffold0620 (1 HSPs)
scaffold0620 (639-681)||(3843-3885)
[»] scaffold0499 (1 HSPs)
scaffold0499 (649-728)||(6581-6660)


Alignment Details
Target: chr6 (Bit Score: 575; Significance: 0; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 9 - 627
Target Start/End: Original strand, 6858403 - 6859021
Alignment:
Q  9 catgagagcaagtgcagcacaaaaagcacacatcatgaataccacagacaagaaaattgtgaaaagggcaaacaataacttgattggcaaacttgtgacg 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  6858403 catgagagcaagtgcagcacaaaaagcacacatcatgaataccacagacaagaaaattgtgaaaaggccaaacaataacttaattggcaaacttgtgacg 6858502  T
Q  109 aagtcttcctcagtataacgtgatataagaaccccaataaacattaaaacggatgatgaagatgcaatgagagataatgcatctgatatgataaagaaag 208  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6858503 aagtcttcctcagtataacgtgatataaggaccccaataaacattaaaacggatgatgaagatgcagtgagagataatgcgtctgatatgataaagaaag 6858602  T
Q  209 agaatgcatttctacctaagaagataggtgtgcccttatcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaataataagagt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6858603 agaatgcatttctacctaagaagataggtgtgcccttatcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaataataagagt 6858702  T
Q  309 acccataattgtgaaagaactcgctgtatctttcgcccattgtcgaccttcattcacaagctgctcatgatttttcttaaataattcacgaggctttaga 408  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6858703 acccataattgtgaaagaactcgctatatctttcgcccattgtcgaccttcattcacaagctgctcatgatttttcttaaataattcacgaggctttaga 6858802  T
Q  409 ccatctgcatttttagcttcttggcacattggaggcacaatgctctctaccatctgtatggaatcaatcatgtcggttttgattaaaccaatatctattt 508  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6858803 ccatctgcatttttagcttcttggcacatcggaggcacaatgctctctaccatctgtatggaatcaatcatgtcggttttgattaaaccaatatctattt 6858902  T
Q  509 atttatcttaatctttacaatttacaaagaacacttaaaagggtcattttgacatttgtctcacaactgcacaacacttaagaaaaacatttttaaaatt 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||    
T  6858903 atttatcttaatctttacaatttacaaagaacacttaaaagggtcattttgacacgtgtctcgcaaccgcacaacacttaagaaaaacatttttaaaatt 6859002  T
Q  609 ctcaattttgtttcccaaa 627  Q
    |||||||||||||||||||    
T  6859003 ctcaattttgtttcccaaa 6859021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 470
Target Start/End: Complemental strand, 6106417 - 6105960
Alignment:
Q  13 agagcaagtgcagcacaaaaagcacacatcatgaataccacagacaagaaaattgtgaaaagggcaaacaataacttgattggcaaacttgtgacgaagt 112  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    |||||||| |||  |||||    
T  6106417 agagcaagtgcagagcaaaaagaacacatcatgaataccacagacaagaaaattgtgaaaaggccaaacaataacttagcgggcaaactcgtgttgaagt 6106318  T
Q  113 cttcctcagtataacgtgatataagaaccccaataaacattaaaacggatgatgaagatgcaatgagagataatgcatctgatatgataaagaaagagaa 212  Q
    |||| |||| |||||| ||| |||||| |||||||||||| ||||| |||||||  ||||||||||||||||| | ||||| ||  ||||||||||| ||    
T  6106317 cttcttcagcataacgcgatgtaagaatcccaataaacatcaaaactgatgatgcggatgcaatgagagataaggaatctgttacaataaagaaagaaaa 6106218  T
Q  213 tgcatttctacctaagaagataggtgtgcccttatcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaataataagagtaccc 312  Q
    ||||||| ||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  6106217 tgcatttttacctaaaaagataggtgttcctttatcctgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaatgatgagagtaccc 6106118  T
Q  313 ataattgtgaaagaactcgctgtatctttcgcccattgtcgaccttcattcacaagctgctcatgatttttcttaaataattcacgaggctttagaccat 412  Q
    | ||||||||||||||| ||| ||||||| ||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||| ||||| ||| ||| |    
T  6106117 acaattgtgaaagaacttgctatatcttttgcccattgtcgaccttcgttcagaaggtgctcatgatttttcgtaaataattcatgaggcgttaaaccgt 6106018  T
Q  413 ctgcatttttagcttcttggcacattggaggcacaatgctctctaccatctgtatgga 470  Q
    |||| ||||| ||||| | |||||||||||||||| | |||||||||  |||||||||    
T  6106017 ctgcgttttttgcttccttgcacattggaggcacagtactctctaccgcctgtatgga 6105960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 9 - 459
Target Start/End: Original strand, 6129482 - 6129932
Alignment:
Q  9 catgagagcaagtgcagcacaaaaagcacacatcatgaataccacagacaagaaaattgtgaaaagggcaaacaataacttgattggcaaacttgtgacg 108  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |  |||||||||||||||    
T  6129482 catgagagcaagtgcagagcaaaaagcacacatcatgaataccacagacaagaaaatggtgaaaaggccaaacaataacttaaccggcaaacttgtgacg 6129581  T
Q  109 aagtcttcctcagtataacgtgatataagaaccccaataaacattaaaacggatgatgaagatgcaatgagagataatgcatctgatatgataaagaaag 208  Q
    ||||||||||| | |||||| ||| |||| |  ||||||||  | ||||| || || | ||||| ||| |||||||| || |||| ||| || |||| ||    
T  6129582 aagtcttcctcggcataacgcgatgtaaggataccaataaatgtcaaaactgacgaagtagatgtaattagagataacgcgtctgctataatgaagagag 6129681  T
Q  209 agaatgcatttctacctaagaagataggtgtgcccttatcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaataataagagt 308  Q
    | |||||||   |||  || || |||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||    
T  6129682 aaaatgcatcattacacaaaaaaataggtgttcccttatattgattgtttcctcctggaacagtgaaagcagcggcaaacatgatggtaatgattagagt 6129781  T
Q  309 acccataattgtgaaagaactcgctgtatctttcgcccattgtcgaccttcattcacaagctgctcatgatttttcttaaataattcacgaggctttaga 408  Q
    ||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6129782 accaacaattgtgaaagaacttgctgtatcttttgcccattgtcgaccttcattcacaagcttctcatgatttttcgtaaataattcacgaggctttaga 6129881  T
Q  409 ccatctgcatttttagcttcttggcacattggaggcacaatgctctctacc 459  Q
    ||||||||||||||||| || | |||||| |||||||||| ||||||||||    
T  6129882 ccatctgcatttttagcctccttgcacataggaggcacaacgctctctacc 6129932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 640 - 807
Target Start/End: Complemental strand, 20701870 - 20701703
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcg 739  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20701870 ctggtgtgccgatcacttttgattcgagatcgggagttagttctttggcttaagtttggttttgggctttttatggtttctttcggtggatcggaggtcg 20701771  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttca 807  Q
    |||||  |||||| ||||||||||||||| ||||||||||| |  |||||||||| || || ||||||    
T  20701770 agaggtagtggaagctgaatgatctttcggataggagcttttcgaatgtggctcaactttgttgttca 20701703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 642 - 766
Target Start/End: Original strand, 13423482 - 13423606
Alignment:
Q  642 ggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgag 741  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||| |||||||| |||||||||||| | |||| |||||| || |    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggctcaagtttggttatgggctttatatggtttctttcgatggaccggaggccgcg 13423581  T
Q  742 aggaggtggaaactgaatgatcttt 766  Q
    ||| ||||||| |||| ||||||||    
T  13423582 aggtggtggaagctgattgatcttt 13423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 683 - 838
Target Start/End: Complemental strand, 3880622 - 3880467
Alignment:
Q  683 tttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttcc 782  Q
    ||||| ||||||| ||||||| | ||||||||||||||||  ||||||||||||||||| || |||||||  ||||| |||||||| ||| |||||||      
T  3880622 tttggatcaagtttggttttgagatttttatggtttctttccgtggatcggaggtcgagtggtggtggaagttgaataatctttcggatatgagcttttt 3880523  T
Q  783 agatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
     |||||||||||||| ||||||||| |  | ||||||| |||||||| ||||||||    
T  3880522 ggatgtggctcagctttggtgttcaagacttggagtttaattttgaggggtgtttt 3880467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 680 - 766
Target Start/End: Complemental strand, 15120624 - 15120538
Alignment:
Q  680 ttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatcttt 766  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||    
T  15120624 ttctttggctcaagtttagttttgggctttttatggtttcttttggtggatcggaggtcgagaggtggtggaagctggttgatcttt 15120538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 639 - 776
Target Start/End: Complemental strand, 26216087 - 26215950
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||  || ||||||||||||||| |||| ||||||||||||| ||||| |    
T  26216087 tctggtgggccgatcacttttgattcgagatcgggagtcagttcttcggttcagttttggttttgggcttttt-tggtgttcttttggtggaccggagat 26215989  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggag 776  Q
     | | || ||||||| |||| |||||||| ||| |||||    
T  26215988 tgcgcggtggtggaagctgattgatctttggaaaaggag 26215950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 639 - 803
Target Start/End: Complemental strand, 32935407 - 32935243
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| | |||||| ||||||  |  |||||| ||||| ||  ||||     
T  32935407 tctggtgggccgatcgcttttgattcgagatcgggagtcagttcttggactcaagtttgattttggacttttttagtgttctttcggtggttcaaaggtt 32935308  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtg 803  Q
    | |||| ||||||| ||| ||||||||||||| | ||| ||| | |||||  ||||||| |||||    
T  32935307 gggaggtggtggaagctgcatgatctttcgaacatgagtttttcggatgtaactcagctttggtg 32935243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 766
Target Start/End: Complemental strand, 26534787 - 26534656
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagt---tctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcgga 734  Q
    ||||||||||||||||||||||||||||||| ||||||||||   ||||||| ||||||| |||||||||||||||  ||| |||||| |||||| || |    
T  26534787 tctggtgggccgatcacttttgattcgagattgggagtcagttcttctttggttcaagtttggttttgggcttttttaggtgttctttcggtggaccgaa 26534688  T
Q  735 ggtcgagaggaggtggaaactgaatgatcttt 766  Q
    ||| | | || ||||||| |||| ||||||||    
T  26534687 ggttgtgcggtggtggaagctgattgatcttt 26534656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 641 - 709
Target Start/End: Original strand, 3117508 - 3117576
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | |||||||||||    
T  3117508 tggtgggccgatcacttttgattcaagatcgggagtcagttctttgactcaagttggtttttgggcttt 3117576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 639 - 766
Target Start/End: Original strand, 9224054 - 9224182
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||  || ||||||||||||||  ||||  ||||| |||| | |||||||    
T  9224054 tctggtgggctgatcgcttttgattcgagatcgggagtcagttctttggttcagttttggttttgggcttttattggtgctctttcggtgcaccggaggt 9224153  T
Q  738 cgagaggaggtggaaactgaatgatcttt 766  Q
     | | || ||||||| |||||||||||||    
T  9224154 tgtgcggtggtggaagctgaatgatcttt 9224182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 640 - 729
Target Start/End: Original strand, 21266127 - 21266216
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtgga 729  Q
    |||||||||||||| |||||||||||||||||||||| |||| | ||| ||||||| ||||||||||||| | |||| |||||||||||||    
T  21266127 ctggtgggccgatcgcttttgattcgagatcgggagttagttatgtggttcaagtttggttttgggctttgt-tggtgttcttttggtgga 21266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 649 - 773
Target Start/End: Complemental strand, 13098629 - 13098505
Alignment:
Q  649 cgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggt 748  Q
    ||||| ||| |||||| |||| |||||| |||||||||||||||||| |||||| |||||||| ||  |||||| |||||   |||||| | | ||||||    
T  13098629 cgatctcttctgattcaagattgggagttagttctttggctcaagtttggtttttggctttttttgtgttctttcggtggtctggaggttgtgtggaggt 13098530  T
Q  749 ggaaactgaatgatctttcgaatag 773  Q
    ||||  ||| |||||||| ||||||    
T  13098529 ggaagatgattgatctttagaatag 13098505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 650 - 773
Target Start/End: Complemental strand, 33968670 - 33968549
Alignment:
Q  650 gatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtg 749  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||  | ||| || ||||| ||  ||||||||  ||| || |||| |||||  ||||    
T  33968670 gatcgcttttgattcgagatcgggagtcagttctttggttcaagttttgattttggatttttttg--ttcttttgacggaccgaaggttgagagatggtg 33968573  T
Q  750 gaaactgaatgatctttcgaatag 773  Q
    ||| |||| |||||||| ||||||    
T  33968572 gaagctgattgatctttagaatag 33968549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 641 - 681
Target Start/End: Original strand, 34105428 - 34105468
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34105428 tggtgggccgatcacttttgattcgagatcgggagtcagtt 34105468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 709
Target Start/End: Original strand, 21265003 - 21265069
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||  |||||||||||||||||||||| |||| | ||| ||||||| |||||||||||||    
T  21265003 gtgggccgatagcttttgattcgagatcgggagttagttatctggttcaagtttggttttgggcttt 21265069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 16510365 - 16510304
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgg 704  Q
    ||||||||||||||||||||||||||| | |||||||||||||  |||||||| | ||||||    
T  16510365 gtgggccgatcacttttgattcgagattgagagtcagttcttttactcaagttggtttttgg 16510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 34090376 - 34090418
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  34090376 tctggtgggtcgatcaattttgattcgagatcgggagtcagtt 34090418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 711
Target Start/End: Original strand, 12794131 - 12794200
Alignment:
Q  643 gtgggccgatca-cttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||  ||||||  ||||| ||||||||    
T  12794131 gtgggccgatcaacttttgattcgagatcaggagtcagttcttgggtccaagtttagtttttggcttttt 12794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 726
Target Start/End: Original strand, 15944034 - 15944120
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaa-gttaggttttgggctttttatggtttcttttggt 726  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||| ||||  ||   |||||||||||||| | |||||||||||    
T  15944034 tggtgagccgatcacttttgattagagttctggagtcagttccttggttcaatcttgttttttgggctttttaggttttcttttggt 15944120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 672
Target Start/End: Complemental strand, 7546497 - 7546464
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgg 672  Q
    |||||||| |||||||||||||||||||||||||    
T  7546497 tctggtggaccgatcacttttgattcgagatcgg 7546464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 3e-66; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 641 - 837
Target Start/End: Complemental strand, 17657068 - 17656872
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  17657068 tggtgggtcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttggactttttatggtttctttcggtggatcggaggtcga 17656969  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttt 837  Q
     ||| ||||||| ||||||||||||||  ||||||||||| |||| |||||||| || ||||||||| | |||||||||| |||||||| |||||||    
T  17656968 taggtggtggaagctgaatgatctttcatataggagcttttcagaggtggctcaactttggtgttcatgattgggagtttaattttgaggggtgttt 17656872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 641 - 766
Target Start/End: Complemental strand, 10248619 - 10248494
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||| ||     
T  10248619 tggtggaccgatcacttttgattcaagatcgggagtcagttctttggctcaagtttggttttttgctttatatggtttcttttggtggatcggaggccgc 10248520  T
Q  741 gaggaggtggaaactgaatgatcttt 766  Q
    |||| ||||||| |||| ||||||||    
T  10248519 gaggtggtggaagctgattgatcttt 10248494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 24995463 - 24995393
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  24995463 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttt 24995393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 639 - 716
Target Start/End: Complemental strand, 30236196 - 30236119
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt 716  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  30236196 tctggtgggacgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggttttgggctttttttggt 30236119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 639 - 707
Target Start/End: Original strand, 15906699 - 15906767
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  15906699 tctggtgggccgatcacatttgattcgagatcgggagtcagttctttggttcaagtttggttttgggct 15906767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 789
Target Start/End: Complemental strand, 12198137 - 12197986
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||| |||||||||||| |||  | || ||||||||||||||||||||||||| ||||||| ||||||| || | ||||||   ||||||||||||    
T  12198137 tctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtttggttttgagctttttttgatgttctttcaatggatcggaggt 12198038  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtg 789  Q
    ||||||| | |||||  | |||||||||||| ||| ||||||| | ||||||    
T  12198037 cgagaggtgatggaagttcaatgatctttcggatatgagcttttcggatgtg 12197986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 789
Target Start/End: Complemental strand, 12442565 - 12442414
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||| |||||||||||| |||  | || ||||||||||||||||||||||||| ||||||| ||||||| || | ||||||   ||||||||||||    
T  12442565 tctggtggaccgatcacttttaattgaaaattgggagtcagttctttggctcaagtttggttttgagctttttttgatgttctttcaatggatcggaggt 12442466  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtg 789  Q
    ||||||| | |||||  | |||||||||||| ||| ||||||| | ||||||    
T  12442465 cgagaggtgatggaagttcaatgatctttcggatatgagcttttcggatgtg 12442414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 863
Target Start/End: Complemental strand, 31207430 - 31207205
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||| | | ||  | ||| ||||||||||||||    
T  31207430 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttgggatttgtgttgtgctttttcggtggatcggaggt 31207331  T
Q  738 cgagagg-aggtggaaactgaatgatctttcgaataggagct-ttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    || ||||   |||  | |||||||| | ||||  |||| ||| ||| | |||||||||||||  ||||||   || |||||||||||||||||| |||||    
T  31207330 cgcgaggtttgtgatagctgaatgacccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggagtatgggagttttattttgag-ggtgt 31207232  T
Q  836 tttctaacgggtgagtagtgacgatggg 863  Q
    | | |   ||||||||||||||||||||    
T  31207231 tct-ttgtgggtgagtagtgacgatggg 31207205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 709
Target Start/End: Original strand, 9519516 - 9519582
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  9519516 gtgggccgatcagttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttt 9519582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 34389073 - 34389003
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| | |||||||||||    
T  34389073 tctggtgggccgatcacttttgattcgagatcaagagtcagttctttgactcaagttggtttttgggcttt 34389003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 639 - 829
Target Start/End: Complemental strand, 15821447 - 15821255
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| || | ||| | |||||||||||  || ||   |||||  ||||||| ||||    
T  15821447 tctggtgggctgatcacttttgattcgagatcgggagtcagctctttgacttatgttggtttttgggcttttgttttgtgctctttcagtggatcagagg 15821348  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
    ||||||||  ||||||||    || || || |  |||||||||| |  |||||||||||||| | |||| | || ||||||||||||||||||    
T  15821347 tcgagaggttgtggaaacaacttgttcatttggttaggagcttttcgaatgtggctcagctcggatgttgaagtctgggagttttattttgag 15821255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 641 - 773
Target Start/End: Complemental strand, 17720771 - 17720640
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcg 739  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| ||| |||| |||||| ||||||   ||||| |    
T  17720771 tggtgggctgatcgcttttgattcg-gatcgggagtcagttctttggttcaatttaggttttgggctgttt-tggtgttctttcggtggacttgaggttg 17720674  T
Q  740 agaggaggtggaaactgaatgatctttcgaatag 773  Q
    ||||| |||||||  ||| |||||||| ||||||    
T  17720673 agaggtggtggaagttgattgatctttagaatag 17720640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 643 - 711
Target Start/End: Complemental strand, 32945767 - 32945699
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    |||||| ||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||    
T  32945767 gtgggctgatcacttttgattcgagatcgggagtcaattctttgattcaagtttggttttgggcttttt 32945699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 16457522 - 16457459
Alignment:
Q  646 ggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||    
T  16457522 ggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttaggcttt 16457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 766
Target Start/End: Original strand, 35062470 - 35062597
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| | | || |||| |||||||||||||||| |  ||| || |||||||| |||||     
T  35062470 tctggtgggccgatcgattttgattcgagatcgagagtcagttctcttgttctagtttggttttgggctttttaggtgttccttcggtggatcagaggtt 35062569  T
Q  739 gagaggaggtggaaactgaatgatcttt 766  Q
    | | || |||||||  ||||||||||||    
T  35062570 gcgcggtggtggaaggtgaatgatcttt 35062597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 710
Target Start/End: Original strand, 36630850 - 36630921
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |||| | ||||||||||||    
T  36630850 tctggtgggccgatcacttttaattcgagatcgggtgtcagttctttgactctagtttgtttttgggctttt 36630921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 32066363 - 32066293
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||| | |||||||||||    
T  32066363 tctggtgggccgatcacttttgattcgaaatcgggagtcagctctttgactccagttggtttttgggcttt 32066293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 37986926 - 37986856
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| | ||||| |||||    
T  37986926 tctggtgggccaatcatttttgattcgagatcgggagtcagttctttgactcaagttggtttttgtgcttt 37986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 41893468 - 41893399
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  41893468 tctggtgggccaaccacttttgattcgagatcgggagtcagttctttgtctcaagtt-gtttttgggcttt 41893399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 712
Target Start/End: Original strand, 10552281 - 10552354
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttta 712  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||| || |||| ||||||| ||||||||    
T  10552281 tctggtgggccgatcgcttttgattctagatcgggagtcagttctctggttctagtttggttttgtgcttttta 10552354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 648 - 744
Target Start/End: Original strand, 20138448 - 20138545
Alignment:
Q  648 ccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagagg 744  Q
    |||||||||||||||| |||||||||||||||||||||| || | ||| | ||||||||||| | | ||  ||||| |||||||||||||||| ||||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgagg 20138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 674 - 803
Target Start/End: Complemental strand, 8862635 - 8862505
Alignment:
Q  674 agtcagttctttggctcaagttaggttttgggcttttt-atggtttcttttggtggatcggaggtcgagagga-ggtggaaactgaatgatctttcgaat 771  Q
    |||||||||||||| |||  || ||||||||| ||||| |||||||||||  || |||||||  | || |||| ||||||| ||||||||||||||| ||    
T  8862635 agtcagttctttggatcagttttggttttgggtttttttatggtttctttcagtagatcggaaattga-aggatggtggaagctgaatgatctttcggat 8862537  T
Q  772 aggagctttccagatgtggctcagctctggtg 803  Q
    | || |||| |||||||||||||||| |||||    
T  8862536 atgaacttttcagatgtggctcagctttggtg 8862505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 711
Target Start/End: Complemental strand, 41791328 - 41791260
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    ||||| ||||| ||||||||||||||||| |||||| |||||||| |||||||  ||||||| ||||||    
T  41791328 gtgggtcgatcgcttttgattcgagatcgagagtcacttctttggttcaagtttagttttggacttttt 41791260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 675
Target Start/End: Original strand, 33967339 - 33967375
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||||||||||| ||||    
T  33967339 tctggtgggccgatcacttttgattcgagatcaggag 33967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 675
Target Start/End: Original strand, 40531245 - 40531281
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40531245 tctgatgggccgatcacttttgattcgagatcgggag 40531281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 12898342 - 12898300
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    |||||||  ||||||||||||||||||||||| ||||||||||    
T  12898342 tctggtgacccgatcacttttgattcgagatccggagtcagtt 12898300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 674
Target Start/End: Original strand, 36796621 - 36796654
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcggga 674  Q
    |||| |||||||||||||||||||||||||||||    
T  36796621 tggttggccgatcacttttgattcgagatcggga 36796654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 710
Target Start/End: Complemental strand, 38577840 - 38577787
Alignment:
Q  657 tttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||||||||||||||||| |||||||||| | ||||| | |||||| |||||    
T  38577840 tttgattcgagatcgggagttagttctttggtttaagttggtttttggactttt 38577787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 7e-64; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 638 - 838
Target Start/End: Original strand, 8745165 - 8745365
Alignment:
Q  638 ttctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8745165 ttctggtgggccgatcacttttgattcgagatcgggattcagttcgttggatcaagtttggttttgggctttttatggtttctttcggtggatcggaggt 8745264  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttt 837  Q
    |||||||  |||||| ||| ||||||||||  ||||||||||| | |||||||||||||| ||||||||| |  ||||||||| |||||||| |||||||    
T  8745265 cgagaggttgtggaagctgcatgatctttcagataggagcttttcggatgtggctcagctttggtgttcaagactgggagtttaattttgaggggtgttt 8745364  T
Q  838 t 838  Q
    |    
T  8745365 t 8745365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 641 - 862
Target Start/End: Complemental strand, 24324864 - 24324640
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtta-ggttttgggctttttatggtttcttttggtggatcggaggtcg 739  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  24324864 tggtgggccgatcaattttgattcgagatcgggagtcaattctttggctcaagttttggttttgggctttttatggtttctttaggtggatcggaggtcg 24324765  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttc 839  Q
    || || ||||||| |||||||||||||||  |||||||||| | | |||||||||||| |||||||||||   | ||||||||||||||| ||||||||     
T  24324764 aggggtggtggaagctgaatgatctttcggttaggagcttttcggctgtggctcagctttggtgttcaggacggagagttttattttgaggggtgttttt 24324665  T
Q  840 --taacgggtgagtagtgacgatgg 862  Q
      | | |||||||||||||||||||    
T  24324664 ctttaggggtgagtagtgacgatgg 24324640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 639 - 868
Target Start/End: Complemental strand, 6716804 - 6716575
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||||| || |||    
T  6716804 tctggttggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtttggtcttgggttttttatggtttctttcggtggatc-gaagtc 6716706  T
Q  739 gagaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttt 837  Q
    |||||| ||||||| |||| ||||| ||||| ||| ||  ||||| |||||||||||||| ||||||| |||  ||||||||| |||||| | |||||||    
T  6716705 gagaggtggtggaagctgattgatcttttcggataagatttttccggatgtggctcagctttggtgttgaggaatgggagtttaattttgtggggtgttt 6716606  T
Q  838 tctaacgggtgagtagtgacgatgggtggtg 868  Q
      |   |||||||||||||| ||||||||||    
T  6716605 cgttgggggtgagtagtgacaatgggtggtg 6716575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 639 - 794
Target Start/End: Original strand, 1320807 - 1320963
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtta-ggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  1320807 tctggtgggccgatcacttttgattcaaaatcggaagtcagttctttggctcaagttttggttttgggctttttatggtttctttcggtggatcggaggt 1320906  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctca 794  Q
    ||||||| ||||| ||||| ||||||  ||| ||| || |||| |||||||||||||    
T  1320907 cgagagggggtggcaactgtatgatccctcggataagatcttttcagatgtggctca 1320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 639 - 867
Target Start/End: Original strand, 34389975 - 34390204
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||  || ||   ||||| |||||||||||||    
T  34389975 tctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggcttttattttgtgctctttcggtggatcggagg 34390074  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||||||  |||||| ||| ||| || ||||| |||||||||| || |||||||||| ||  ||||||   || |||||||||||||||||| ||||||    
T  34390075 tcgagaggttgtggaagctgcatgttcattcgattaggagcttttcaaatgtggctcaacttgggtgttgtagtctgggagttttattttgaggggtgtt 34390174  T
Q  837 ttctaacgggtgagtagtgacgatgggtggt 867  Q
     | |   || |||||||||||||||||||||    
T  34390175 ct-ttggggatgagtagtgacgatgggtggt 34390204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 639 - 802
Target Start/End: Complemental strand, 42533320 - 42533158
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  42533320 tctggtgggctgatcacttttgattcgagatcgggagtcaatcctttggcttaagtttggttt-gggctttttatggtttctttcggtggatcagaggtc 42533222  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggt 802  Q
    | |||| ||||| ||||||| ||||||||  ||| ||||||| | ||| ||| |||||| ||||    
T  42533221 gtgaggtggtggcaactgaacgatctttcagataagagcttttcggatatggatcagctttggt 42533158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 641 - 829
Target Start/End: Original strand, 3478367 - 3478555
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcg 739  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||| | |||| |||||| |||||||||||| |||    
T  3478367 tggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagattagttttgggctttgt-tggtgttctttcggtggatcggagatcg 3478465  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
    ||||| || |||| ||||||||||||||| ||  || |||| | ||  ||||| |||| ||||||| |||  ||||||||| ||||||||    
T  3478466 agaggtggcggaagctgaatgatctttcggatgtgaacttttctgagttggctaagctttggtgttgaggactgggagtttaattttgag 3478555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 639 - 707
Target Start/End: Original strand, 13311852 - 13311920
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13311852 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagttaggtgttgggct 13311920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 10244195 - 10244265
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  10244195 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttagtttttggccttt 10244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 6584922 - 6585029
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||  || ||   ||||| |||||||||||||    
T  6584922 tctggtgggccgatcacttttgattcgagatcgggagtcagctctttggcttaagttggtttttgggcttttgttttgtgctctttcggtggatcggagg 6585021  T
Q  737 tcgagagg 744  Q
    | ||||||    
T  6585022 ttgagagg 6585029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 641 - 711
Target Start/End: Original strand, 12480901 - 12480971
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  12480901 tggtgggccgatcgcttttgattcgagatcgggagtcagttctttggttcaagtttggtttttggcttttt 12480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 38306274 - 38306344
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||    
T  38306274 tctggtgggccgatcacttttgattcgagattgggagtcagttctttgactcaagttggtttttgggcttt 38306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 639 - 863
Target Start/End: Complemental strand, 47325953 - 47325728
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt-ttatggtttcttttggtggatcggaggt 737  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||| | ||||||||||| |  ||   ||||| | ||||||||||||    
T  47325953 tctggtgggccgatcgcttttgatttgagatcgggagtcagctctttgactcaagttggtttttgggctttgtgctgtgctctttcgatggatcggaggt 47325854  T
Q  738 cgagagg-aggtggaaactgaatgatctttcgaataggagct-ttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    || ||||   |||  | |||||||||| ||||  |||| ||| ||| | |||||||||||||  ||||||  ||| |||||||||||||||||| |||||    
T  47325853 cgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttgag-ggtgt 47325755  T
Q  836 tttctaacgggtgagtagtgacgatggg 863  Q
    | | |   ||||||||||||||||||||    
T  47325754 tct-ttgtgggtgagtagtgacgatggg 47325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 641 - 710
Target Start/End: Original strand, 3867131 - 3867200
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||    
T  3867131 tggtgggctgatcacttttgattcgagaccgggagtcagttctttgactcaagttggtttttgggctttt 3867200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 641 - 709
Target Start/End: Complemental strand, 3419722 - 3419654
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||    
T  3419722 tggtgggctgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggcttt 3419654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 639 - 794
Target Start/End: Original strand, 38485569 - 38485723
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||| || |||| ||||||||||||||| |||| ||| || | |||| |||||||    
T  38485569 tctggtgggccgatcacttttgattcgagatcgggagtcag-tatctggttctagtttggttttgggcttttt-tggtgttccttcgatggaccggaggt 38485666  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctca 794  Q
     |   || ||||||| ||||||||||||| ||  ||||| | | |||||||||||||    
T  38485667 tgcacggtggtggaagctgaatgatctttagagaaggagttcttcagatgtggctca 38485723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 656 - 766
Target Start/End: Original strand, 36449113 - 36449224
Alignment:
Q  656 ttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatgg-tttcttttggtggatcggaggtcgagaggaggtggaaac 754  Q
    |||| |||||||||  |||||||||||||||| |||||||| ||||||| ||| || ||| ||||||| |||||||||||||| |||||| ||||||| |    
T  36449113 tttttattcgagattaggagtcagttctttggttcaagttatgttttggacttattttggttttctttcggtggatcggaggttgagaggtggtggaagc 36449212  T
Q  755 tgaatgatcttt 766  Q
      ||||||||||    
T  36449213 ataatgatcttt 36449224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 48058722 - 48058588
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||| ||||| ||||||||| |||||||| |||||||| ||||||||||||| |||||| ||| ||||||| | |||||| |||||   ||||||    
T  48058722 tctggtgggtcgatcgcttttgatttgagatcggaagtcagttttttggctcaagtttggtttt-ggccttttatgttgttctttcggtggtctggaggt 48058624  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     | |||| ||||||| |||| |||||||| ||||||    
T  48058623 tgtgaggtggtggaagctgattgatctttagaatag 48058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 9349762 - 9349832
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||| ||||  || ||||||| | |||||||||||    
T  9349762 tctggtgggccgatcacttttgattcgagatcgggagtcaattctcaggttcaagtttgattttgggcttt 9349832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 720
Target Start/End: Original strand, 16954666 - 16954748
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggtttct 720  Q
    |||||| | ||||||||||||| ||||||||||  ||||||||||||| |||||| || ||||||||||||||||||||||||    
T  16954666 tctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttgactcaagttttggttttgggctttttatggtttct 16954748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 762
Target Start/End: Complemental strand, 41089816 - 41089691
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||| |||||||| | ||||| |||||  || ||   ||||| |||||||||||||    
T  41089816 tctggtggaccgatcacttttgattcgagattgggagtcagctctttgactcaagttggtttttgagcttttgttttgtgatctttcggtggatcggagg 41089717  T
Q  737 tcgagaggaggtggaaactgaatgat 762  Q
    ||| ||||  |||||| ||| |||||    
T  41089716 tcgcgaggttgtggaagctgcatgat 41089691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 711
Target Start/End: Complemental strand, 11379195 - 11379122
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggcttttt 711  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||| || |||||||||||||||    
T  11379195 tctggtgagccgatcgcttttgattcgagatcgggagtcagtactttggttcaagttttggttttgggcttttt 11379122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 766
Target Start/End: Complemental strand, 46133346 - 46133217
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttagg-ttttgggctttttatggt-ttcttttggtggatcggagg 736  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||| ||| ||||||| || ||||||||||||| |||| ||| || |||||| ||||||    
T  46133346 tctggtgagccgatcgcttttgatttgagatcgggagtcagttctctggttcaagtttggtttttgggctttttttggtgttccttcggtggaccggagg 46133247  T
Q  737 tcgagaggaggtggaaactgaatgatcttt 766  Q
    | | | || || |||| |||| ||||||||    
T  46133246 ttgcgtggtgggggaagctgattgatcttt 46133217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 718
Target Start/End: Complemental strand, 16829004 - 16828924
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggttt 718  Q
    |||||| ||| ||||||||||| ||||||||||  ||||||||||||| |||||| || ||||||||||||||||||||||    
T  16829004 tctggttggctgatcacttttgtttcgagatcgaaagtcagttctttgactcaagttttggttttgggctttttatggttt 16828924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 695
Target Start/End: Original strand, 33435122 - 33435178
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 695  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  33435122 tctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtctcaagtt 33435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 641 - 709
Target Start/End: Original strand, 37795004 - 37795072
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||  ||||||| | |||||||||||    
T  37795004 tggtgggccgttcagttttgattcgagatcgggagtcagttctttgagtcaagttggtttttgggcttt 37795072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 710
Target Start/End: Complemental strand, 35745895 - 35745824
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||| ||||| ||||||||||||||||||||||| |||||  ||||||||||||||| | ||||||||||||    
T  35745895 tctgatgggctgatcacttttgattcgagatcggaagtcatctctttggctcaagttggtttttgggctttt 35745824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 47457090 - 47456956
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||| ||| |||||| ||||||||| ||||| |||||||||||||||||||||||||  ||| ||||| ||||||||| |||||| |||||  |||| ||    
T  47457090 tctgatggaccgatcgcttttgatttgagattgggagtcagttctttggctcaagtttagttatgggc-ttttatggtgttctttcggtggtccggaagt 47456992  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     | |||| ||||||| || | |||||||| ||||||    
T  47456991 tgtgaggtggtggaagctaattgatctttagaatag 47456956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 648 - 744
Target Start/End: Complemental strand, 44353623 - 44353526
Alignment:
Q  648 ccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagagg 744  Q
    |||||||||||||||| |||||||||||||||||||||| || | ||| | ||||||||||| | | ||  ||||| |||||||||||||||| ||||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgacttatgttggtttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgagg 44353526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 639 - 711
Target Start/End: Original strand, 23983208 - 23983280
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||| || ||||||||| ||||||||| |||||    
T  23983208 tctggtgggtcgatcgtttttgattcgagatcgggagtcaattccttagctcaagtttggttttgggtttttt 23983280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 709
Target Start/End: Complemental strand, 5860353 - 5860286
Alignment:
Q  642 ggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||| | |||||| | |||||||||||    
T  5860353 ggtgggcctatcgcttttgattcgagatcgggagtcaattctttgacgcaagttggtttttgggcttt 5860286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 699 - 766
Target Start/End: Original strand, 44755662 - 44755729
Alignment:
Q  699 ttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatcttt 766  Q
    |||||||||||||||||||||||| |||  ||| |||||||| ||| ||||||| |||||||||||||    
T  44755662 ttttgggctttttatggtttctttcggtatatcagaggtcgataggtggtggaagctgaatgatcttt 44755729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 707
Target Start/End: Complemental strand, 9428173 - 9428105
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||| || || |||| ||| |||||||    
T  9428173 tctggtgagccgatcacttttgattcgagatcagaagtcagttcttcggttctagtttggtcttgggct 9428105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 46262187 - 46262151
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||||||||||||||||    
T  46262187 tctggtgggccgatcacttttgattcgagatcgggag 46262151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 672
Target Start/End: Complemental strand, 17802884 - 17802851
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgg 672  Q
    ||||||||||||||||||||||||||||||||||    
T  17802884 tctggtgggccgatcacttttgattcgagatcgg 17802851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 27993604 - 27993568
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27993604 tctggtggaccgatcacttttgattcgagatcgggag 27993568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 35206761 - 35206725
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35206761 tctggtgggccgatcacttttgatccgagatcgggag 35206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 655 - 773
Target Start/End: Complemental strand, 22568164 - 22568045
Alignment:
Q  655 cttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaa 753  Q
    ||||||||||| |||||||||| |||| ||||| ||||| || | ||||||  |||||| |  |||||| || ||| || |||| |||||| |||| |||    
T  22568164 cttttgattcgtgatcgggagttagttttttggttcaagttttgattttggattttttaggtgttctttcggcggaccgaaggttgagaggtggtgaaaa 22568065  T
Q  754 ctgaatgatctttcgaatag 773  Q
    |||| |||||||| ||||||    
T  22568064 ctgattgatctttagaatag 22568045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 744
Target Start/End: Complemental strand, 48162083 - 48161986
Alignment:
Q  650 gatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctt---tttatggtttcttttggtggatcggaggtcgagagg 744  Q
    ||||| ||||||||||||||||| | ||||||||||||||||| ||   |||||| |||   ||| ||   |||||||||||||| ||||||||||||    
T  48162083 gatcatttttgattcgagatcggaaatcagttctttggctcaaattgatttttggacttttgtttttgtgctcttttggtggatcagaggtcgagagg 48161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 7e-64; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 650 - 879
Target Start/End: Complemental strand, 41118024 - 41117792
Alignment:
Q  650 gatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtg 749  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||    
T  41118024 gatcacttttgattcgagatcggaagtaagttctttggctcaaattaggttttgggctttttatggtttctttcgatggatcagaggtcgagaggtggtg 41117925  T
Q  750 gaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg-ttttct-aacgggt 847  Q
    ||| ||||||||||||||||||||||||||| | || ||||||||| | ||||||||| | | |||||||||||| |||| |||| |||||| || ||||    
T  41117924 gaagctgaatgatctttcgaataggagctttgcggaggtggctcaggtttggtgttcatgatcgggagttttattctgaggggtgtttttctaaaggggt 41117825  T
Q  848 gagtagtgacgatgggtgg-tggatatcatttt 879  Q
    ||||| ||||||||||||| |||||||| ||||    
T  41117824 gagtaatgacgatgggtggttggatatcgtttt 41117792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 639 - 879
Target Start/End: Complemental strand, 38637300 - 38637058
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  38637300 tctggcgggccgatcacttttgattcgagatcgggagtcaattctttggcttaagt-aggttttgggctttttatggtttcttttggtggatcggaggtc 38637202  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg-ttt 837  Q
    |||||| ||||||| ||||||||||||||  ||| ||||||| | || | || ||| || ||||||||| | |||||||||||| | | || |||| |||    
T  38637201 gagaggtggtggaagctgaatgatctttcagataagagctttgccgaggcggttcaactttggtgttcaagattgggagttttagtataaggggtgtttt 38637102  T
Q  838 tctaa-cgggtgagtagtgacgatgggtgg-tggatatcatttt 879  Q
    |||||  ||||||||||||||||||||||| |||||||||||||    
T  38637101 tctaagggggtgagtagtgacgatgggtggttggatatcatttt 38637058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 639 - 838
Target Start/End: Original strand, 25753185 - 25753384
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||||    
T  25753185 tctggtggggcgatcacttttgattcgagatcgggagtcagttctttggctcaagtttgattttgggctttttattgtttctttcggtggatcggaggtc 25753284  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    || |||  |||||| ||||||||||||||| | || ||||||   ||||||| ||| || || ||||||||  ||  ||||| |||||||| ||||||||    
T  25753285 gataggcagtggaagctgaatgatctttcggagagaagctttttggatgtggttcaactttgatgttcaggactgaaagtttaattttgaggggtgtttt 25753384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 639 - 805
Target Start/End: Complemental strand, 53823489 - 53823322
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||| |||||    
T  53823489 tctggtggaccaatcacttttgattcgagatcgggagtcagttctttggctcaagtttggttttgggttttttatggtttctttcggttgatcgaaggtc 53823390  T
Q  739 gagaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    |||||| |||||||  ||| ||||| ||| | |||||||||||   |||||||||||||| |||||||    
T  53823389 gagaggtggtggaagttgattgatctttttggataggagcttttaggatgtggctcagctttggtgtt 53823322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 640 - 797
Target Start/End: Complemental strand, 39421080 - 39420923
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcg 739  Q
    ||||||||||||||||||||||||||||||||||||||| ||| || | |||  || |||||||||||||||||||||| ||| |||||||||||| |||    
T  39421080 ctggtgggccgatcacttttgattcgagatcgggagtcaattccttagatcagttttggttttgggctttttatggtttttttcggtggatcggagatcg 39420981  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagct 797  Q
    ||||| |||||||||||| |||| ||||  ||||||||||| || |||||||| ||||    
T  39420980 agaggtggtggaaactgattgatatttcagataggagcttttcaaatgtggcttagct 39420923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 694 - 867
Target Start/End: Original strand, 49528140 - 49528315
Alignment:
Q  694 ttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctc 793  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||  |||||||||||||| |||| |||||| | ||||||| ||    
T  49528140 ttaggttttgggctttttatggtttctttcggtggatcggaggtcgggaggtggtggaagatgaatgatctttcggatagaagctttgcggatgtggttc 49528239  T
Q  794 agctctggtgttcaggtttgggagttttattttgagtggtg-ttttctaa-cgggtgagtagtgacgatgggtggt 867  Q
    |||| ||||||||| |  || ||||||||||||||| |||| ||||||||  ||||||||||||| ||||| ||||    
T  49528240 agctttggtgttcaagactgagagttttattttgaggggtgtttttctaagggggtgagtagtgaagatggatggt 49528315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 639 - 809
Target Start/End: Complemental strand, 22811228 - 22811058
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | | ||||| ||||||     
T  22811228 tctggtgggccgatcattttttattcgagatcgggagtcagttctttggctcaagtttggttttaggctttttatggtttctctcgatggattggaggtt 22811129  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcagg 809  Q
    |||||| |||||||  ||||   ||||  |  |||||| ||| | |||||||||||||| |||||||||||    
T  22811128 gagaggtggtggaagttgaaatgtcttctggttaggagttttgcggatgtggctcagctttggtgttcagg 22811058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 650 - 868
Target Start/End: Complemental strand, 16833078 - 16832858
Alignment:
Q  650 gatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtg 749  Q
    ||||||||||||||||||||||| ||||| ||  |||| ||||||| || |||||||||||||||||||||||  |||| ||||| ||| ||||| | |     
T  16833078 gatcacttttgattcgagatcggaagtcattttgttggatcaagtttggatttgggctttttatggtttctttcagtggttcggaagtcaagaggtgatt 16832979  T
Q  750 gaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt--ctaacgggt 847  Q
    ||| ||||||||||||| | ||| ||||||| | ||||||||||| || ||||||||| |  || |||||| |||||||| ||||||||  ||   ||||    
T  16832978 gaagctgaatgatctttgggatatgagcttttcggatgtggctcaactttggtgttcaagactgtgagtttaattttgaggggtgttttttctttggggt 16832879  T
Q  848 gagtagtgacgatgggtggtg 868  Q
    |||||||||||| ||||||||    
T  16832878 gagtagtgacgacgggtggtg 16832858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 644 - 805
Target Start/End: Original strand, 48098351 - 48098512
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagag 743  Q
    |||||| |||||||||| ||||||||||||||||||||  |||| | ||||| ||||||||||||||||| |||||||| | ||||||| ||||||||||    
T  48098351 tgggcctatcacttttgtttcgagatcgggagtcagtttgttggattaagtttggttttgggctttttatagtttctttcgatggatcgaaggtcgagag 48098450  T
Q  744 gaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    | |||||||  |||| ||||||||  ||||||||||| | ||||||||||| || |||||||    
T  48098451 gtggtggaagatgaacgatctttcagataggagcttttcggatgtggctcaactttggtgtt 48098512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 639 - 767
Target Start/End: Complemental strand, 2061806 - 2061678
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||| |||  || | |||||||||||| ||| ||||||| |||||||||||||||    
T  2061806 tctggtgggctgatcacttttgattcgagattgagagtcagttctttggatcagttttgattttgggcttttgatgatttctttcggtggatcggaggtc 2061707  T
Q  739 gagaggaggtggaaactgaatgatctttc 767  Q
    |||||| |||||||  |||||||||||||    
T  2061706 gagaggtggtggaagttgaatgatctttc 2061678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 642 - 863
Target Start/End: Original strand, 2825799 - 2826020
Alignment:
Q  642 ggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt--tatggtttcttttggtggatcggaggtcg 739  Q
    ||||||||||||| ||||||||||||||||||| |||  ||||||||||||  | | ||||||||||||  | ||   ||||| |||||||||||||||     
T  2825799 ggtgggccgatcatttttgattcgagatcgggaatcacctctttggctcaatgtggtttttgggcttttattttgtactctttcggtggatcggaggtct 2825898  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttc 839  Q
    |||||  |||||| ||| ||| || ||||  |||||||||| |  | |||| |||| |  |||||| | ||||||||||||||||||||| |||||| ||    
T  2825899 agaggttgtggaagctgcatgttcattcggttaggagcttttcgaaggtggttcagtttgggtgttgaagtttgggagttttattttgaggggtgttctc 2825998  T
Q  840 taacgggtgagtagtgacgatggg 863  Q
    |   ||||||||||||||||||||    
T  2825999 t--ggggtgagtagtgacgatggg 2826020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 654 - 867
Target Start/End: Complemental strand, 35341391 - 35341179
Alignment:
Q  654 acttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt--tatggtttcttttggtggatcggaggtcgagaggaggtgga 751  Q
    ||||||||| ||||||||| |||||| ||||||||||||||| | |||||| |||||  | ||   ||||| |||||||||||| ||||||||  |||||    
T  35341391 acttttgatccgagatcggaagtcagctctttggctcaagttggtttttggccttttgttttgtgctctttcggtggatcggagttcgagaggttgtgga 35341292  T
Q  752 aactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttctaacgggtgagt 851  Q
    | ||| ||| || |||   || ||||||| |  ||||||||||| | ||||||| | ||||||||||||||||||||| |||||| |||   ||||||||    
T  35341291 agctgcatgttcattcagttatgagcttttcgaatgtggctcagtt-tggtgttgaagtttgggagttttattttgaggggtgttctct--ggggtgagt 35341195  T
Q  852 agtgacgatgggtggt 867  Q
    ||||||||||||||||    
T  35341194 agtgacgatgggtggt 35341179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 773
Target Start/End: Original strand, 38929840 - 38929974
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||| ||||||||| |||||| ||||   |||||||    
T  38929840 tctgctgggccgatcacttttgattcgagatcaagagtcagttctttggctcaagtttgattttgggc-ttttatggtgttctttcggtgatccggaggt 38929938  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     | |||| |||||||  ||| |||||||| ||||||    
T  38929939 tgtgaggtggtggaagttgattgatctttggaatag 38929974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 737
Target Start/End: Original strand, 49747540 - 49747638
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||| | ||||||| ||||||| ||||||||||| ||||||  |||||||| ||||    
T  49747540 tctggtgagccgatcacttttgatttgagatcgagagtcagttcttttgatcaagtttggttttgagctttttatgggttctttctgtggatcgaaggt 49747638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 8255040 - 8255146
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt-ttatggtttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||| | ||||||||||| || ||   ||||| ||||||||||||||    
T  8255040 tctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggctttgttttgtgctctttcggtggatcggaggt 8255139  T
Q  738 cgagagg 744  Q
    || ||||    
T  8255140 cgcgagg 8255146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 8268458 - 8268564
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt-ttatggtttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||| | ||||||||||| || ||   ||||| ||||||||||||||    
T  8268458 tctggtgggccgatcacttttgatccgagatcagaagtcagttctttgactcaagttggtttttgggctttgttttgtgctctttcggtggatcggaggt 8268557  T
Q  738 cgagagg 744  Q
    || ||||    
T  8268558 cgcgagg 8268564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 641 - 711
Target Start/End: Original strand, 16501746 - 16501816
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||| || |||| |||||||||||||||    
T  16501746 tggtgggccgatcgcttttgattcgagatcgggagtcagctctttggttctagtttggttttgggcttttt 16501816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 639 - 805
Target Start/End: Complemental strand, 19815292 - 19815122
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagt----taggttttgggctttttatggt-ttcttttggtggatcgg 733  Q
    |||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||    |  |||||||| |||   |||| |||||| |||||| |||    
T  19815292 tctggtggaccgattactttttattcgagatcaggagtcagttctttggctcaagtttaattagttttggg-tttgattggtgttctttcggtggaccgg 19815194  T
Q  734 aggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    ||||||||||  ||||||| || |||||||||||| |||||| |||| | ||||||||| | || |||||||    
T  19815193 aggtcgagagatggtggaagctaaatgatctttcggataggaacttttccgatgtggctaaactttggtgtt 19815122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 639 - 862
Target Start/End: Complemental strand, 31050730 - 31050505
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctt---tttatggtttcttttggtggatcggag 735  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||| |  |||| | ||||||||||   ||| ||   |||||  |||||||||||    
T  31050730 tctggtgggccgatcacttttgattcgagatcggaagttaggtctttggtttgagttggtttttgggcttttgtttttgtgctctttcagtggatcggag 31050631  T
Q  736 gtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    |||||||||  |||||| ||| ||| || ||||  |||||||||| |   ||||||| ||||  |||||| | || |||  ||||||||||||| ||||     
T  31050630 gtcgagaggttgtggaagctgcatgttcattcggttaggagcttttcgattgtggctaagcttgggtgttgaagtctggctgttttattttgaggggtg- 31050532  T
Q  836 tttctaacgggtgagtagtgacgatgg 862  Q
    || ||   |||||||||||||||||||    
T  31050531 ttccttgggggtgagtagtgacgatgg 31050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 639 - 766
Target Start/End: Original strand, 35800502 - 35800629
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||  || |||| ||||||||||||||| |||| |||||| |||||| |||||||    
T  35800502 tctggtgaaccgatcgcttttgattcgagatcggaagtcagttctttgattccagtttggttttgggcttttt-tggtgttctttcggtggaccggaggt 35800600  T
Q  738 cgagaggaggtggaaactgaatgatcttt 766  Q
       | || ||||||| |||||||||||||    
T  35800601 ttcgcggtggtggaacctgaatgatcttt 35800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 710
Target Start/End: Original strand, 28966880 - 28966951
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||| || |||||  |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  28966880 tctggtagggcgatcgtttttgattcgagattgggagtcagttctttggctcaagtttggttttgggctttt 28966951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 4305738 - 4305808
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| | |||| ||||||    
T  4305738 tctggtggggcgatcacttttgattcgagatcgggagttagttctttgtctcaagttggtttttaggcttt 4305808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 30964454 - 30964560
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||| | ||||||| ||| | | ||  ||||||||||| ||||||||    
T  30964454 tctgatgggccgatcacttttgattcgtgatcgggagtccgttctttgactcaagttggtttttgggttttgtgttgtgctcttttggtggttcggaggt 30964553  T
Q  738 cgagagg 744  Q
    || ||||    
T  30964554 cgcgagg 30964560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 716
Target Start/End: Complemental strand, 6600013 - 6599936
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt 716  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||||  |||||||  |||||||||| ||||||||    
T  6600013 tctggtgggccgatcgcttttgattagagatcgggagtcggttctttgattcaagttttgttttgggctatttatggt 6599936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 695
Target Start/End: Complemental strand, 46698853 - 46698797
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 695  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  46698853 tctggtgggccgattgcttttgattcgagatcgggagtcagttctttggttcaagtt 46698797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 661 - 829
Target Start/End: Original strand, 19673135 - 19673303
Alignment:
Q  661 attcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagaggaggtggaaactgaat 759  Q
    |||||||||| ||||||||||||||||||||||||  |||||||| ||||  |||| |||||| |||||||||  |||||| ||  ||||||| || |||    
T  19673135 attcgagatcaggagtcagttctttggctcaagtttagttttggg-ttttgttggtgttctttcggtggatcgacggtcgatagatggtggaagctaaat 19673233  T
Q  760 gatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
    ||| ||| | ||| || |||| | ||||||||| | || ||||||| |||  || |||||| ||||||||    
T  19673234 gatattttggatatgaacttttcggatgtggctaaactttggtgttgaggactgagagtttaattttgag 19673303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 695
Target Start/End: Complemental strand, 30167628 - 30167576
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 695  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30167628 gtgggtcgatcacttttgattcgagatcgggagtcggttctttgactcaagtt 30167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 639 - 737
Target Start/End: Original strand, 12296188 - 12296286
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||| ||||| | ||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||| |||| |||||| |||||| |||||||    
T  12296188 tctggtgtgccgagcgcttttgattcgagatcaaaagtcagttctttggttcaagtttgattttgggcttttt-tggtgttctttcggtggaccggaggt 12296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 39041342 - 39041300
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  39041342 tctggtgggccgatcacttttgattcgagatcaggagtcagtt 39041300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 684
Target Start/End: Complemental strand, 21387272 - 21387227
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctt 684  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  21387272 tctggtggaccgatcacttttgattcgagatcggaagtcagttctt 21387227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 707
Target Start/End: Complemental strand, 24740171 - 24740103
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    ||||||||||||||| ||| | |||| |||||||||||||||| ||||| |||| || |||||||||||    
T  24740171 tctggtgggccgatcgcttataattcaagatcgggagtcagttatttggttcaaatttggttttgggct 24740103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 695
Target Start/End: Complemental strand, 36962683 - 36962628
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 695  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||||    
T  36962683 tctggtgggccgattacttttgattcgagatcaggagtcag-tctttgactcaagtt 36962628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 40813849 - 40813813
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||||||||||||||||    
T  40813849 tctggtgggccgatcacttttgattcgagatcgggag 40813813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 671 - 773
Target Start/End: Complemental strand, 21983857 - 21983755
Alignment:
Q  671 gggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcga 769  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||| |||||| |||||  ||||||| | |||| |||||||  ||| |||||||| ||    
T  21983857 gggagtcagttctttggctcaagtttagttatgggc-ttttatggtgttctttcggtggtccggaggttgtgaggtggtggaagttgattgatctttaga 21983759  T
Q  770 atag 773  Q
    ||||    
T  21983758 atag 21983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 695
Target Start/End: Complemental strand, 2792335 - 2792286
Alignment:
Q  646 ggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtt 695  Q
    ||||||||||||||||||||||||||| ||||||||  ||| ||||||||    
T  2792335 ggccgatcacttttgattcgagatcggaagtcagtttcttgactcaagtt 2792286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 672
Target Start/End: Original strand, 53756769 - 53756802
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgg 672  Q
    ||||||||||||||||||||||||||||||||||    
T  53756769 tctggtgggccgatcacttttgattcgagatcgg 53756802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 19311410 - 19311363
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 687  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  19311410 tctggtgggtcgatcacttttgattcgaga-cgggagtcagttatttgg 19311363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 641 - 681
Target Start/End: Original strand, 26474851 - 26474891
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  26474851 tggtgggccgatcacttttgattcgagatcgagagttagtt 26474891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 670
Target Start/End: Complemental strand, 37707423 - 37707392
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatc 670  Q
    ||||||||||||||||||||||||||||||||    
T  37707423 tctggtgggccgatcacttttgattcgagatc 37707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 676
Target Start/End: Original strand, 12296060 - 12296098
Alignment:
Q  638 ttctggtgggccgatcacttttgattcgagatcgggagt 676  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12296060 ttctggtgggccgattacttttgcttcgagatcgggagt 12296098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 639 - 868
Target Start/End: Original strand, 14879448 - 14879680
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtta-ggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||  |||||||| ||||||||||||||||| ||||||| ||||||    
T  14879448 tctggtgggccgatcacttttgattcgagatcgggagtctgttcgttggatcaagttttggttttggactttttatggtttctttcggtggataggaggt 14879547  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttt 837  Q
    ||||||| ||||||| || |||||||||||  ||||||||||| | |||||||||| | | ||||||||| || ||||||||| |||||||| |||||||    
T  14879548 cgagaggtggtggaagcttaatgatctttcagataggagcttttcggatgtggctcgggtttggtgttcaagtctgggagtttaattttgaggggtgttt 14879647  T
Q  838 t-ctaacggg-tgagtagtgacgatgggtggtg 868  Q
    | ||  |||| ||| ||||||||||| ||||||    
T  14879648 ttctttcggggtgaatagtgacgatgtgtggtg 14879680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 641 - 828
Target Start/End: Complemental strand, 39021342 - 39021155
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  |||||||||| |||||| | ||||||||||||||||||||||||    
T  39021342 tggtgggccgatcacttttgattcgaggtcgggagtcagttctttggatcaagtctggttttgggc-ttttatagattcttttggtggatcggaggtcga 39021244  T
Q  741 gaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttga 828  Q
    |||  ||||| | |||| ||||| ||||| ||| ||| ||| | ||||||||| |||| ||||||| |||  || |||||| |||||||    
T  39021243 gagatggtggtagctgattgatcttttcggatatgagtttttcggatgtggcttagctttggtgttgaggactgagagtttcattttga 39021155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 645 - 809
Target Start/End: Original strand, 25647703 - 25647869
Alignment:
Q  645 gggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtta--ggttttgggctttttatggtttcttttggtggatcggaggtcgaga 742  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||| |||||   |||||| |||||||||||||||||||||||||||||||||||||||    
T  25647703 gggcctatcacttttgattcgagatcgggagttggttctttggcttaagtttttggttttaggctttttatggtttcttttggtggatcggaggtcgaga 25647802  T
Q  743 ggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcagg 809  Q
    || |||| ||  ||||||||||||||  || ||||||| | || ||||||||| | ||||| |||||    
T  25647803 ggtggtgaaagttgaatgatctttcggttatgagcttttcggacgtggctcagttttggtgctcagg 25647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 641 - 836
Target Start/End: Original strand, 37123397 - 37123590
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||| ||| | ||||||||| ||||    
T  37123397 tggtgggccgatcacttttgattcgagattgggagtcagttctttggatcaaatttggttttgggctttttatggtttc-tttcgaggatcggagttcga 37123495  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
     ||| ||||||| ||| ||||||||||  | | ||||||| | |||||||||||||| || ||||| ||  || |||||| |||| ||| ||||||    
T  37123496 taggtggtggaagctgtatgatctttcagacatgagcttttc-gatgtggctcagctttgatgttctggactgagagtttaatttggaggggtgtt 37123590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 639 - 764
Target Start/End: Complemental strand, 33144017 - 33143891
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  33144017 tctggtggatcgatcacttttgattcgagatcgggagtcagttctttggatcaagattagtttttgggctttttatggtttctttcggtggatcagaggt 33143918  T
Q  738 cgagaggaggtggaaactgaatgatct 764  Q
    || |||| ||||||| |||| ||||||    
T  33143917 cgcgaggtggtggaagctgattgatct 33143891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 639 - 812
Target Start/End: Complemental strand, 14755333 - 14755159
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg-ctcaagttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  || || | || |||||||||||||| |||||||| | ||||||||||||    
T  14755333 tctggtgggccgatcacttttgattcaagatcgggagtcagttctttggtttcgaggttggatttgggctttttattgtttctttcgatggatcggaggt 14755234  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggttt 812  Q
    ||||||  |||||||  ||||||||||||||   | ||||||    |||||||||||||| ||||||| ||||||    
T  14755233 cgagagatggtggaagttgaatgatctttcggggatgagcttgttggatgtggctcagctttggtgttaaggttt 14755159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 641 - 867
Target Start/End: Complemental strand, 23328416 - 23328189
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt--tatggtttcttttggtggatcggaggtc 738  Q
    |||||| ||||||||||||||||||||||||||||| || | ||||||||||||| | ||||| ||||||  | ||   ||||| |||||||||||||||    
T  23328416 tggtggaccgatcacttttgattcgagatcgggagttagctttttggctcaagttggtttttgagcttttgttttgtgctctttcggtggatcggaggtc 23328317  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    ||||||  |||||| ||   || || ||||  |||||||||| |  |||||||||||||  |||||| | || ||||||||||||||||||||||||| |    
T  23328316 gagaggttgtggaagctccttgttcattcggttaggagcttttcgaatgtggctcagcttgggtgttgaagtctgggagttttattttgagtggtgttct 23328217  T
Q  839 ctaacgggtgagtagtgacgatgggtggt 867  Q
     |   ||||||||||||||||||||||||    
T  23328216 -ttgggggtgagtagtgacgatgggtggt 23328189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 639 - 869
Target Start/End: Original strand, 19176515 - 19176748
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt--tatggtttcttttggtggatcggagg 736  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||  | ||   |||||||||||||||||||    
T  19176515 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttttgatttgtgctcttttggtggatcggagg 19176614  T
Q  737 tcgagaggaggtggaaactgaatgatc--tttcgaataggagct-ttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggt 833  Q
    |||  |||  |||||| ||| ||||||  |||||   ||| ||| |||   |||||||||||||  |||||   ||| |||| ||||||||||||| |||    
T  19176615 tcgcaaggttgtggaagctgcatgatccttttcggtcaggtgctcttcgtaatgtggctcagcttgggtgtcggggtctgggtgttttattttgag-ggt 19176713  T
Q  834 gttttctaacgggtgagtagtgacgatgggtggtgg 869  Q
    ||| | | | ||||||||||||||||||| ||||||    
T  19176714 gttct-ttaggggtgagtagtgacgatggatggtgg 19176748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 643 - 776
Target Start/End: Complemental strand, 1652950 - 1652817
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgag 741  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||| |||| |||||| |||||| |||||||  ||    
T  1652950 gtgggccgatcacttttgattcgagatcaggagttagttctttggttcaagtttggttttgggcttttt-tggtgttctttcggtggaccggaggttaag 1652852  T
Q  742 aggaggtggaaactgaatgatctttcgaataggag 776  Q
     || || ||||  |||||||||||| ||| |||||    
T  1652851 cggtggcggaagttgaatgatctttagaaaaggag 1652817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 17550970 - 17551040
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  17550970 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttt 17551040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 639 - 829
Target Start/End: Complemental strand, 40023640 - 40023448
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||| | |||||||||||  || ||   ||||| |||||||| ||||    
T  40023640 tctggtggaccgatcacttttgattcgagatcgggagtcgattctttggcttaagttggtttttgggcttttgttttgtgctctttcggtggatcagagg 40023541  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
     || ||||  |||||| ||| ||| || ||||  |||||||||| |  |||||||||||||  ||||||   || ||||||||||||||||||    
T  40023540 acgggaggttgtggaagctgcatgttcattcggttaggagcttttcgaatgtggctcagctagggtgttgtagtctgggagttttattttgag 40023448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 642 - 710
Target Start/End: Original strand, 47945722 - 47945790
Alignment:
Q  642 ggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  47945722 ggtgggccgatcacttttgattcgagatcgggagtcagttatttggctcaagtttgattttgggctttt 47945790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 644 - 794
Target Start/End: Complemental strand, 823498 - 823347
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgaga 742  Q
    |||||||||||||||||||||||||||| ||||||||| |||   |||||||  ||||||||||| || |||| |||||| ||| || | ||||| ||||    
T  823498 tgggccgatcacttttgattcgagatcgagagtcagttgtttcattcaagttttgttttgggcttattttggtgttctttcggtagaccagaggttgaga 823399  T
Q  743 ggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctca 794  Q
    || || |||| |||||||||||||  |||||||  ||| |||||||||||||    
T  823398 ggtggcggaagctgaatgatcttttcaataggacattttcagatgtggctca 823347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 722
Target Start/End: Original strand, 14193953 - 14194038
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag--ttaggttttgggctttttatggtttcttt 722  Q
    ||||| || |||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||    
T  14193953 tctggcggaccgatcacttttgattcgagattgggagtcggttctttggctcaagtttttggttttgggctttttatggtttcttt 14194038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 751
Target Start/End: Original strand, 5556583 - 5556696
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| | |  |||||| |||||| |||||||    
T  5556583 tctggtggggcgatcgcttttgattcgagatcgggagtcagttctttggttcaagttttggttttgggcttttcaggtgttctttcggtggaccggaggt 5556682  T
Q  738 cgagaggaggtgga 751  Q
      ||||| ||||||    
T  5556683 ttagaggtggtgga 5556696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 639 - 710
Target Start/End: Original strand, 43012388 - 43012459
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||    
T  43012388 tctggtggcccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgagctttt 43012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 655 - 766
Target Start/End: Original strand, 27398987 - 27399099
Alignment:
Q  655 cttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagaggaggtggaaa 753  Q
    |||| |||||||| || |||||||||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||| | ||||| |||||| |||||       
T  27398987 ctttagattcgaggtcaggagtcagttatttggttcaagtttggttttgggctttttttggtgttcttttggtggaccagaggttgagaggtggtggttg 27399086  T
Q  754 ctgaatgatcttt 766  Q
    |||||||||||||    
T  27399087 ctgaatgatcttt 27399099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 639 - 710
Target Start/End: Complemental strand, 9584121 - 9584050
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||    
T  9584121 tctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtctcaagatggtttttgggctttt 9584050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 700 - 838
Target Start/End: Complemental strand, 28937721 - 28937584
Alignment:
Q  700 tttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctct 799  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||  ||||||| ||||||||| ||||    |||||||||   ||||||||||| || |    
T  28937721 tttgggctttttatggtttctttcggtggatcggaggtcaagagatggtggaagctgaatgatgtttcagggaggagctttttggatgtggctca-cttt 28937623  T
Q  800 ggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    | ||||||||| | |||||||  |||| || ||||||||    
T  28937622 gatgttcaggtctaggagtttgttttttaggggtgtttt 28937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 640 - 744
Target Start/End: Complemental strand, 2392573 - 2392468
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtc 738  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| || ||||| | ||||||||||| | | ||  ||||| |||||||||||||||    
T  2392573 ctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttgggctttgtgttgtgctctttcggtggatcggaggtc 2392474  T
Q  739 gagagg 744  Q
    | ||||    
T  2392473 gcgagg 2392468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 644 - 709
Target Start/End: Original strand, 20611801 - 20611866
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || ||||| | |||||||||||    
T  20611801 tgggccgatcatttttgattcgagatcgggagtcagttctttgacttaagttggtttttgggcttt 20611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 836
Target Start/End: Original strand, 45398809 - 45399008
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct----ttttatggtttcttttggtggatcgga 734  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||  | ||||| | |||||||||    |||||||   ||||| | |||||||||    
T  45398809 tctggtggaccgatcacttttgattcgagatcgagagtcagctctttgatttaagttggtttttgggcttttgttttatg--ctctttcgatggatcgga 45398906  T
Q  735 ggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg 834  Q
    ||||||||||  |||||| ||| ||| || ||||  || ||||||| |  ||||||| || ||  |||||| | ||||||||||| ||||||| | ||||    
T  45398907 ggtcgagaggttgtggaagctgcatgttcattcggttatgagcttttcgaatgtggcgcaacttaggtgttgaagtttgggagttctattttgtggggtg 45399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 738
Target Start/End: Original strand, 45163872 - 45163968
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||| | |||||||| |||| || ||||| | ||||||||||| | | ||  ||||| |||||||||||||||    
T  45163872 gtgggccgatcacttttgattcgagatcagaagtcagttttttgtcttaagttggtttttgggctttgtgttgtgctctttcggtggatcggaggtc 45163968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 639 - 678
Target Start/End: Complemental strand, 34475822 - 34475783
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtca 678  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34475822 tctggtgggccgatcacttttgattcgagatcgggagtca 34475783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 736 - 878
Target Start/End: Original strand, 4170855 - 4170999
Alignment:
Q  736 gtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    |||| |||| ||||||| || |||||||||| |  ||||||||||  ||||||||||||||| ||||||| |||  || |||||||| |||||| |||||    
T  4170855 gtcgggaggtggtggaagcttaatgatctttggg-taggagctttggagatgtggctcagctttggtgttaaggactgagagttttactttgaggggtgt 4170953  T
Q  836 ttt--ctaacgggtgagtagtgacgatgggtgg-tggatatcattt 878  Q
    |||    |  ||||||||||||||||||| ||| ||||||||||||    
T  4170954 ttttagaagggggtgagtagtgacgatggatggttggatatcattt 4170999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 689
Target Start/End: Complemental strand, 24099395 - 24099345
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggct 689  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  24099395 tctggtgggccgatcacttttgattcgatatcgggaatcagttttttggct 24099345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 641 - 711
Target Start/End: Complemental strand, 30935456 - 30935386
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt 711  Q
    |||||||| |||| |||||||||| ||||||||||| |||| ||||| ||||||| ||||||| |||||||    
T  30935456 tggtgggctgatcgcttttgattcaagatcgggagttagttatttggttcaagtttggttttgagcttttt 30935386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 2394320 - 2394255
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttggg 705  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| || ||||| | |||||||    
T  2394320 ctggtggaccgatcacttttgattcgagattggaagtcagttctttgtcttaagttggtttttggg 2394255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 695
Target Start/End: Original strand, 30127275 - 30127332
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttct-ttggctcaagtt 695  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  30127275 tctggtgagccgatcgcttttgattcgagatcgggagtcagttctcttgactcaagtt 30127332  T

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Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 20710776 - 20710740
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||||||||||||||||    
T  20710776 tctggtgggccgatcacttttgattcgagatcgggag 20710740  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 686
Target Start/End: Original strand, 31424249 - 31424296
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttg 686  Q
    |||||| ||||| || |||||||||||||||||||||||||| |||||    
T  31424249 tctggtaggccggtcgcttttgattcgagatcgggagtcagtgctttg 31424296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 812 - 869
Target Start/End: Original strand, 7105029 - 7105085
Alignment:
Q  812 tgggagttttattttgagtggtgttttctaacgggtgagtagtgacgatgggtggtgg 869  Q
    ||||||||||||||| || ||||||| ||   ||||||||||||||||||||||||||    
T  7105029 tgggagttttattttaaggggtgttt-ctttggggtgagtagtgacgatgggtggtgg 7105085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 1e-53; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 639 - 838
Target Start/End: Complemental strand, 7195307 - 7195110
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||| |||||||||||||||    
T  7195307 tctggtgagccgatcacttttgattcgagatcgggagtcagttctttggctcaagttagagtttgggc-ttttatggtttttttcggtggatcggaggtc 7195209  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    ||||||  |||||| |||||| |||||| | ||||||||||| | |||||||||||||| |||| ||||||  | |||||||||||||||| | ||||||    
T  7195208 gagaggtcgtggaagctgaataatcttttggataggagctttgcggatgtggctcagctttggtattcaggact-ggagttttattttgagggttgtttt 7195110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 656 - 838
Target Start/End: Original strand, 8297498 - 8297680
Alignment:
Q  656 ttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaact 755  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||  |    
T  8297498 ttttgattcgagatcgggagtcagttctttggctcaagtttggttttggactttttatggtttctttcggtgaatcggaggtcgtgaggtggtggaagtt 8297597  T
Q  756 gaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    ||||| ||||||| ||||||||||| | |||||||||| | | ||||||||| | | |||||||| |||||||| ||||||||    
T  8297598 gaatggtctttcggataggagcttttcggatgtggctcggttttggtgttcatgatggggagtttaattttgaggggtgtttt 8297680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 639 - 766
Target Start/End: Complemental strand, 13954302 - 13954175
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||     
T  13954302 tctggtgggccgatcacttttgattcgagatcgggagtcattactttggctcaagtttggttttgggctttttatggtttctttcggtggatcggaagtt 13954203  T
Q  739 gagaggaggtggaaactgaatgatcttt 766  Q
    || ||| |||||||||||| ||||||||    
T  13954202 gaaaggtggtggaaactgattgatcttt 13954175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 639 - 868
Target Start/End: Complemental strand, 26046032 - 26045802
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||  ||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||| ||||||||||||||| | || ||||||||||||    
T  26046032 tctggtgaaccgatcacttttgattcgagatcgggagttagtgttttggctcaagtttggttttggactttttatggtttctctcgggggatcggaggtc 26045933  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg-ttt 837  Q
    |  |||  |||||| |||| |||||||||  ||| ||||||| | || ||| |||| || ||||||| ||| ||| |||||| |||||||| |||| |||    
T  26045932 gttaggctgtggaagctgattgatctttcagatatgagcttttcggaggtgactcaactttggtgtttaggattgagagtttaattttgaggggtgtttt 26045833  T
Q  838 tctaacgggtgagtagtgacgatgggtggtg 868  Q
    |||   |||||||||||||||||||| ||||    
T  26045832 tctttggggtgagtagtgacgatgggaggtg 26045802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 639 - 768
Target Start/End: Complemental strand, 14302498 - 14302369
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||| | ||||||||||| |||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  14302498 tctggtggactgatcacttttggttcgagattgggagtcagttctttggagcaagtttggttttgggctttttatggtttctttcggtggatcggaggtc 14302399  T
Q  739 gagaggaggtggaaactgaatgatctttcg 768  Q
    |||||| ||||||| ||| |||||||||||    
T  14302398 gagaggtggtggaagctgcatgatctttcg 14302369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 639 - 838
Target Start/End: Complemental strand, 33258950 - 33258751
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| || || | || ||||||||||||||||||||||| |||||||||||||||    
T  33258950 tctggtgggccgatcacttttgattcgagatcaggagttagttctttggttcgaggttggatttgggctttttatggtttctttcggtggatcggaggtc 33258851  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtttt 838  Q
    |||||   |||||| ||||||||| | ||    ||||||||    |||||||||||||| |||||||||||| | |||||||  ||||| | ||||||||    
T  33258850 gagagatagtggaagctgaatgatttctcagggaggagcttgttggatgtggctcagctttggtgttcaggtctaggagtttgtttttgtggggtgtttt 33258751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 641 - 794
Target Start/End: Complemental strand, 21402903 - 21402749
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| ||||||| |||||| ||    
T  21402903 tggtgggccgatcacttttagttcgagatcgggagtcagttctttgactcaggtttggttttgagctttttatggtttctttcggtggattggaggttga 21402804  T
Q  741 gaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctca 794  Q
    |||| |||||||  ||| ||||| |||||  |||||||||| || | ||||||||    
T  21402803 gaggtggtggaagttgattgatcttttcgggtaggagcttttcaaacgtggctca 21402749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 639 - 793
Target Start/End: Complemental strand, 7392099 - 7391950
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||      | |||||||||| ||||||||||||||| |||||||||||||||    
T  7392099 tctggtggaccgatcacttttgattcgagatcgggagtcagttctttggc-----attggttttgggc-ttttatggtttctttcggtggatcggaggtc 7392006  T
Q  739 gagaggaggtggaaactgaatgatctt-tcgaataggagctttccagatgtggctc 793  Q
    |||||| ||| ||| | || ||||||| | | ||||||||||| | ||||||||||    
T  7392005 gagaggtggttgaagcggattgatcttattggataggagcttttcggatgtggctc 7391950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 639 - 768
Target Start/End: Original strand, 25992020 - 25992149
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| |||| || | |||||||||||||||||| ||||||| | |||||||||||||    
T  25992020 tctggtgggccaatcgcttttgattcgagatcgagagtcagttctttagctcgaggttggttttgggctttttatgatttctttcgatggatcggaggtc 25992119  T
Q  739 gagaggaggtggaaactgaatgatctttcg 768  Q
    | |||  | ||||| || ||||||||||||    
T  25992120 gtgagatgttggaagcttaatgatctttcg 25992149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 22675392 - 22675322
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22675392 tctggtggaccgatcgattttgattcgagatcgggagtcagttctttggctcaagtttggttttgggcttt 22675322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 34378111 - 34378181
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||    
T  34378111 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgacacaagttggtttttgggcttt 34378181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 39184255 - 39184119
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag--ttaggttttgggctttttatggt-ttcttttggtggatcggag 735  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||  || ||||||| ||||||| |||| |||||| |||||| | |||    
T  39184255 tctggtgggccgatcacttttgattcgagatcggaagtcagttctttggttcaagcatttggttttgagcttttt-tggtgttctttcggtggaccagag 39184157  T
Q  736 gtcgagaggaggtggaaactgaatgatctttcgaatag 773  Q
    || | ||||  |||||| |||| |||||||| ||||||    
T  39184156 gttgtgaggtagtggaagctgattgatcttttgaatag 39184119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 643 - 710
Target Start/End: Original strand, 27713086 - 27713153
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttt 710  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  27713086 gtgggccgatcgtttttgattcgagatcgggaatcagttctttggctcaagtttggttttgggctttt 27713153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 643 - 708
Target Start/End: Original strand, 18593260 - 18593325
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctt 708  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  18593260 gtgggcagatcacttttgattcgagatcgggagttagttctttgactcaagttggtttttgggctt 18593325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 698374 - 698444
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||| | |||||||||||    
T  698374 tctggtggaccgatctcttttgattcgagatcgggagtcaactctttgactcaagttggtttttgggcttt 698444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 24072334 - 24072201
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||| ||| |||| ||||||||| |||||||| |||||||||||||| |||||||  | |||||| ||||| |||| |||||| |||||| |||||||    
T  24072334 tctggttggctgatcgcttttgatttgagatcggaagtcagttctttggttcaagtt--gatttggggtttttttggtgttctttcggtggaccggaggt 24072237  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     || ||| ||| ||  ||||||| ||||| ||||||    
T  24072236 tgaaaggtggttgatgctgaatggtctttagaatag 24072201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 641 - 803
Target Start/End: Complemental strand, 17854133 - 17853971
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcg 739  Q
    ||||||||||| | ||||||| |||||||||||||||| || ||||| |||||||    ||||||||| || |  | |||||| |||||| | || || |    
T  17854133 tggtgggccgaccgcttttgactcgagatcgggagtcaattatttggttcaagttctactttgggcttattttaatgttctttcggtggacctgaagttg 17854034  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtg 803  Q
    ||||| |||||||  |||||||||||| ||||| || |||| | |||||||||||||| |||||    
T  17854033 agaggtggtggaagttgaatgatctttagaatatga-cttttcggatgtggctcagctatggtg 17853971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 655 - 764
Target Start/End: Complemental strand, 39024502 - 39024385
Alignment:
Q  655 cttttgattcgagatcgggagtcagttctttggctcaag-------ttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagaggag 746  Q
    |||||||||||||||||||||||| |||||||| |||||       || ||||||||| |||||||||| |||||| ||||||| ||| || |||||| |    
T  39024502 cttttgattcgagatcgggagtcacttctttggttcaagtttggttttgggttttgggttttttatggtgttctttcggtggattggaagttgagaggtg 39024403  T
Q  747 gtggaaactgaatgatct 764  Q
    ||||||  ||||||||||    
T  39024402 gtggaacttgaatgatct 39024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 711
Target Start/End: Original strand, 8730930 - 8731003
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggcttttt 711  Q
    |||||||| || ||| ||||| ||||||||||||||||||||||||||| ||| | || |||||||||||||||    
T  8730930 tctggtggacctatcgcttttaattcgagatcgggagtcagttctttggttcaggttttggttttgggcttttt 8731003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 11754403 - 11754452
Alignment:
Q  247 tcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggt 296  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||    
T  11754403 tcttgattgtttccaccagggacagtgaaagctgcagcaaacatgatggt 11754452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 11790544 - 11790593
Alignment:
Q  247 tcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggt 296  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||    
T  11790544 tcttgattgtttccaccagggacagtgaaagctgcagcaaacatgatggt 11790593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 11834761 - 11834810
Alignment:
Q  247 tcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggt 296  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||    
T  11834761 tcttgattgtttccaccagggacagtgaaagctgcagcaaacatgatggt 11834810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 11882373 - 11882422
Alignment:
Q  247 tcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggt 296  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||    
T  11882373 tcttgattgtttccaccagggacagtgaaagctgcagcaaacatgatggt 11882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 705
Target Start/End: Original strand, 31721695 - 31721756
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttggg 705  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||  || |||||||||    
T  31721695 tgggccgatcgcttttgattcgagatcgggagtcagttctctggttcatttttggttttggg 31721756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 11919224 - 11919328
Alignment:
Q  245 tatcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggtaataataagagtacccataattgtgaaagaactcgctgtatctttcgc 344  Q
    |||||||||||||||| || || || || || ||||| |||||||||| |||| | ||||||||||| | ||||||||||||  | ||||| ||||| ||    
T  11919224 tatcttgattgtttccgcccgggactgtaaatgctgcggcaaacatgacggtagtgataagagtacctacaattgtgaaagatgttgctgtctcttttgc 11919323  T
Q  345 ccatt 349  Q
    |||||    
T  11919324 ccatt 11919328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 707
Target Start/End: Original strand, 23426357 - 23426425
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||| |  |||| || |||||||||||    
T  23426357 tctggtggaccgaacacttttgattcgagattgggagtcagttcttcgaatcaattttggttttgggct 23426425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 641 - 679
Target Start/End: Original strand, 12046270 - 12046308
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcag 679  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12046270 tggtgggccgatcacttttgattcgagatcgggactcag 12046308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 11748193 - 11748144
Alignment:
Q  247 tcttgattgtttcctcctggaacagtgaaagctgcagcaaacatgatggt 296  Q
    |||||||||||||| || || ||||||||||||||||| |||||||||||    
T  11748193 tcttgattgtttccaccagggacagtgaaagctgcagcgaacatgatggt 11748144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 29087494 - 29087601
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    |||||||| | |||| |||||||||||||||| |||||||||||||||  |||| || | || ||||||||  || ||   ||||| |||||||||||||    
T  29087494 tctggtggactgatcccttttgattcgagatcaggagtcagttctttgaatcaaattggtttctgggcttttgttttgtgctctttcggtggatcggagg 29087593  T
Q  737 tcgagagg 744  Q
    ||| ||||    
T  29087594 tcgcgagg 29087601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 4e-53; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 648 - 879
Target Start/End: Original strand, 7695985 - 7696218
Alignment:
Q  648 ccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggagg 747  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||| |||| ||    
T  7695985 ccgatcacttttgattcgataccgggagtcagttctttggctcaagttaggttttgggc-ttttacggtttctttcggtggatcgaaggtcgggaggtgg 7696083  T
Q  748 tggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg-ttttctaacgg- 845  Q
    ||||| ||||||||||||||| ||||||| |||   ||||||||||| || |||||||||||    ||||||||||||| || |||| |||||||| ||     
T  7696084 tggaagctgaatgatctttcggataggagatttgaggatgtggctcaactttggtgttcaggaccaggagttttatttttaggggtgtttttctaaggga 7696183  T
Q  846 gtgagtagtgacgatgggtgg-tggatatcatttt 879  Q
    |||||||||||||||| |||| || ||||||||||    
T  7696184 gtgagtagtgacgatgagtggttgaatatcatttt 7696218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 639 - 805
Target Start/End: Original strand, 1269496 - 1269663
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  1269496 tctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggatttttatggtttctttcagtggatcggaggtc 1269595  T
Q  739 gagaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    |||||  ||||||| |||||| ||| ||||| ||||||||||| |  ||||||||| ||| |||||||    
T  1269596 gagagttggtggaagctgaataatcttttcggataggagcttttcgaatgtggctctgctttggtgtt 1269663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 643 - 868
Target Start/End: Complemental strand, 10173642 - 10173418
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgag 741  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||  |||| |||||| |||| |||||||||||||    
T  10173642 gtgggccgatcacttttgattcgagatcggaagtaagttatttggctcaagtttggttttgggcttttgttggtgttctttcggtgaatcggaggtcgag 10173543  T
Q  742 aggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttcta 841  Q
    ||| |||||||  |||||||||||| ||||| ||||||| | |||||||||||||| ||||||| |||  || |||||| |||||||  || || ||||     
T  10173542 aggtggtggaagttgaatgatcttttgaatatgagcttttcggatgtggctcagctttggtgttgaggactgagagtttaattttga--ggagtattctt 10173445  T
Q  842 acgggtgagtagtgacgatgggtggtg 868  Q
      |||||||||||||||||| ||||||    
T  10173444 tggggtgagtagtgacgatgagtggtg 10173418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 644 - 805
Target Start/End: Original strand, 34230219 - 34230380
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagag 743  Q
    ||||||||||| |||| |||||||||| |||||||||||||||| ||||||| | ||||||||||||| |||||||||| |||||||||||||| |||||    
T  34230219 tgggccgatcattttttattcgagatcaggagtcagttctttggatcaagtttgattttgggctttttgtggtttctttcggtggatcggaggttgagag 34230318  T
Q  744 gaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    | ||||||| |||||||||||||| |||| ||||||| ||||||||||||| || |||||||    
T  34230319 gtggtggaagctgaatgatctttcaaataagagcttttcagatgtggctcaactttggtgtt 34230380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 639 - 779
Target Start/End: Original strand, 13337287 - 13337427
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  13337287 tctgatgggccgatcacttttgattcgaaatcggaagtcagttctttgactcaagttaggttttggactttttatggtttctttcggtggataggaggtc 13337386  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctt 779  Q
    |||||| |||| | |||||||||||||||  ||||||||||    
T  13337387 gagaggtggtgaacactgaatgatctttcagataggagctt 13337427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 647 - 868
Target Start/End: Complemental strand, 16952443 - 16952222
Alignment:
Q  647 gccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagagga 745  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| |||| |||||| |||||||||||||| ||||||     
T  16952443 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagaggt 16952344  T
Q  746 ggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttctaacgg 845  Q
    ||||||| || || ||||||||| ||||||||||| | ||||||| ||| || ||||||| |||  ||||||||| |||| ||| |||||| | |   ||    
T  16952343 ggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttct-ttgggg 16952245  T
Q  846 gtgagtagtgacgatgggtggtg 868  Q
    |||||||||||||||| ||||||    
T  16952244 gtgagtagtgacgatgagtggtg 16952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 647 - 868
Target Start/End: Complemental strand, 17023108 - 17022887
Alignment:
Q  647 gccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagagga 745  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| |||| |||||| |||||||||||||| ||||||     
T  17023108 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagaggt 17023009  T
Q  746 ggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttctaacgg 845  Q
    ||||||| || || ||||||||| ||||||||||| | ||||||| ||| || ||||||| |||  ||||||||| |||| ||| |||||| | |   ||    
T  17023008 ggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttct-ttgggg 17022910  T
Q  846 gtgagtagtgacgatgggtggtg 868  Q
    |||||||||||||||| ||||||    
T  17022909 gtgagtagtgacgatgagtggtg 17022887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 647 - 868
Target Start/End: Complemental strand, 17060414 - 17060193
Alignment:
Q  647 gccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcgagagga 745  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| |||| |||||| |||||||||||||| ||||||     
T  17060414 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggttgagaggt 17060315  T
Q  746 ggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttctaacgg 845  Q
    ||||||| || || ||||||||| ||||||||||| | ||||||| ||| || ||||||| |||  ||||||||| |||| ||| |||||| | |   ||    
T  17060314 ggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttagaggggtgttct-ttgggg 17060216  T
Q  846 gtgagtagtgacgatgggtggtg 868  Q
    |||||||||||||||| ||||||    
T  17060215 gtgagtagtgacgatgagtggtg 17060193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 641 - 829
Target Start/End: Complemental strand, 37770707 - 37770520
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||||||||||||||||||||  |||| ||||||| |||||| | |||| || |||||||||||||| ||||||||||| |||| ||||||||||||    
T  37770707 tggtgggccgatcacttttgattctggatcaggagtcaattctttagatcaattttggttttgggctttt-atggtttctttcggtgaatcggaggtcga 37770609  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
    |||| | ||||| ||||||||||||||  ||| ||||||| | || ||||||| ||| |||||||||||| || |||||| ||||||||    
T  37770608 gaggtgttggaagctgaatgatctttcagatatgagcttttctgaggtggctcggctttggtgttcaggtctgtgagtttaattttgag 37770520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 639 - 867
Target Start/End: Original strand, 7874304 - 7874532
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||  || ||   || || |||||||||||||    
T  7874304 tctggtgggtcgatcacttttgattcgagatcgggagtcagctctttgactcaagttggtttttgggcttttgttttgtgctcattcggtggatcggagg 7874403  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||||||  |||||||||   || || || |  |||||||||| |  |||||||||||||  |||||| | || | |||||||||||||||| | ||      
T  7874404 tcgagaggttgtggaaactacttgttcatttggttaggagcttttcgaatgtggctcagcttgggtgttgaagtcttggagttttattttgagggatg-- 7874501  T
Q  837 ttctaacgggtgagtagtgacgatgggtggt 867  Q
    ||||   ||||||||||||||||||||||||    
T  7874502 ttctttggggtgagtagtgacgatgggtggt 7874532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 15126478 - 15126344
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||| |||||| |||||  |||||||    
T  15126478 tctggtgggccgatcatttttgattcgagatcgggagtcggttctttggctcatgtttggttttgggc-ttttatggtgttctttcggtggtccggaggt 15126380  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     | |||| |||||||||| | |||||||| ||||||    
T  15126379 tgtgaggtggtggaaacttattgatctttagaatag 15126344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 639 - 773
Target Start/End: Complemental strand, 22885201 - 22885067
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || || |||| |||||| |||||| | |||||    
T  22885201 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggttcaagtttggttttggg-ttgttttggtgttctttcggtggaccagaggt 22885103  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     |||||| |||||||  ||| |||||| | ||||||    
T  22885102 tgagaggtggtggaagttgattgatctatagaatag 22885067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 639 - 863
Target Start/End: Complemental strand, 39338933 - 39338708
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| | | ||  ||||| ||||||||||||||    
T  39338933 tctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggctttgtgttgtgctctttcggtggatcggaggt 39338834  T
Q  738 cgagagg-aggtggaaactgaatgatctttcgaataggagct-ttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    || ||||   |||  | |||||||||| ||||  |||| ||| ||| |  |||| |||||||  |||||| |||| |||||||||||||||||| |||||    
T  39338833 cgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaattgtgactcagcttgggtgttgaggtctgggagttttattttgag-ggtgt 39338735  T
Q  836 tttctaacgggtgagtagtgacgatggg 863  Q
    | | |   ||||||||||||||||||||    
T  39338734 tct-ttgtgggtgagtagtgacgatggg 39338708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 692 - 838
Target Start/End: Complemental strand, 41086812 - 41086665
Alignment:
Q  692 agttaggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggc 791  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||   |||||| |    
T  41086812 agtttggttttgggctttttatggttcctttcggtggatcggaggtcgagaggtggtggaagctgaatgatctttcggataagagctttttggatgtgac 41086713  T
Q  792 tcagctctggtg-ttcaggtttgggagttttattttgagtggtgtttt 838  Q
    ||  || ||| | |||||| ||| |||||| |||||||| ||||||||    
T  41086712 tctactttggagtttcaggattgcgagtttgattttgaggggtgtttt 41086665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 639 - 865
Target Start/End: Original strand, 14405211 - 14405439
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||  || ||   ||||| |||||||| || |    
T  14405211 tctggtgggccgatcacttttgattcgagatcgggagtcagctctttggctcaagttggtttttgggcttttgttttgtgctctttcggtggatcagaag 14405310  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||| ||  |||||||||| | | || || |  |||||||||  |  |||||||||  ||  |||||| | || |||||||||||||||||| | ||||    
T  14405311 tcgagtggttgtggaaactgcacgttcatttggttaggagcttgtcgcatgtggctcgacttgggtgttgaagtctgggagttttattttgagggatgtt 14405410  T
Q  837 ttctaacgggtgagtagtgacgatgggtg 865  Q
     | |   |||||||||||||| |||||||    
T  14405411 cttttgggggtgagtagtgacaatgggtg 14405439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 639 - 766
Target Start/End: Original strand, 2062902 - 2063029
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||| |||| | | |||||    
T  2062902 tctggtgggccgattgcttttgattcgagatcgggagtcagctctttggctcaagtttggttttgggcttttt-tggtgttctttcggtgtaccagaggt 2063000  T
Q  738 cgagaggaggtggaaactgaatgatcttt 766  Q
     | ||||  ||||||||||| ||||||||    
T  2063001 tgtgaggttgtggaaactgattgatcttt 2063029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 639 - 708
Target Start/End: Original strand, 16959995 - 16960064
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctt 708  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16959995 tctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggctcaagtttggttttgggctt 16960064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 773
Target Start/End: Original strand, 4471936 - 4472069
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||| | ||||||||||| | |||| ||||||||||||| |||||||    
T  4471936 tctggtgggccgatcgcctttgattcgagatcgggagtcagttctttgattcaagtttgtttttgggctttat-tggtgttcttttggtggaccggaggt 4472034  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
    | | ||| ||| ||| |||| |||||||| ||||||    
T  4472035 c-aaaggtggtagaagctgattgatctttagaatag 4472069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 639 - 867
Target Start/End: Complemental strand, 14106592 - 14106361
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtt----tcttttggtggatcgga 734  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| | |||  || |||||| || ||||| |  ||    ||||| |||||||| ||    
T  14106592 tctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagttttggtttttgggtttttgtttttgtgctctttcggtggatcaga 14106493  T
Q  735 ggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtg 834  Q
    ||||||||||  ||||||  || |||||| ||||  || ||||||| |  |||||||||||||  |||||| | || || ||||||||||||||| ||||    
T  14106492 ggtcgagaggttgtggaagttgtatgatcattcggttaagagctttacgaatgtggctcagcttgggtgttgaagtctgagagttttattttgaggggtg 14106393  T
Q  835 ttttctaacgggtgagtagtgacgatgggtggt 867  Q
    || | |   |||||||||||||||||| |||||    
T  14106392 ttct-ttgggggtgagtagtgacgatgagtggt 14106361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 647 - 737
Target Start/End: Original strand, 17079190 - 17079281
Alignment:
Q  647 gccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| |||| |||||| ||||||||||||||    
T  17079190 gccgatcttttttgattcgagatcgggagccagttctttggctcaagtttggttttggacattttttggtgttctttcggtggatcggaggt 17079281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 641 - 794
Target Start/End: Original strand, 18681080 - 18681233
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcg 739  Q
    ||||||||||||  | ||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||| |||| ||| ||||||||||| ||||| |    
T  18681080 tggtgggccgattgcatttgattcgagatcgggagtcagttctctggttcaagtttggttttgggc-ttttgtggtgttcctttggtggatcagaggttg 18681178  T
Q  740 agaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctca 794  Q
       || |||| || ||||||||||||| ||  ||||||| | | |||||||||||    
T  18681179 cacggtggtgaaagctgaatgatctttagagaaggagctcttcggatgtggctca 18681233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 639 - 764
Target Start/End: Complemental strand, 33788700 - 33788575
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||| || |||||| || || |||| |||||| |||| | | |||||    
T  33788700 tctggtgggccgatcgcttttgattcgagattgggagtcagttctttggttcaggtttggctttggg-ttgttttggtgttctttcggtgaaccagaggt 33788602  T
Q  738 cgagaggaggtggaaactgaatgatct 764  Q
     |||||| ||||||| |||| ||||||    
T  33788601 tgagaggtggtggaagctgattgatct 33788575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 387186 - 387288
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctt---tttatggtttcttttggtggatcggag 735  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||| | ||||| ||||   ||| ||   ||||||||||||||||||    
T  387186 tctggtgggctgatcacttttgatttgagatcgggagtcaattctttgactcaagttggtttttgagcttttgtttttgtgctcttttggtggatcggag 387285  T
Q  736 gtc 738  Q
    |||    
T  387286 gtc 387288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 766
Target Start/End: Complemental strand, 31902482 - 31902355
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||| ||| ||||||| ||||||| |||| || || | ||| ||||||||| |||||||    
T  31902482 tctggtgggccaatcgcttttaattcgagatcgggagtcagttctctggttcaagtttggttttgagcttatt-tgatgttcctttggtggaccggaggt 31902384  T
Q  738 cgagaggaggtggaaactgaatgatcttt 766  Q
     | | || || |||| |||||||||||||    
T  31902383 tgcgtggtgggggaagctgaatgatcttt 31902355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 867
Target Start/End: Original strand, 5254273 - 5254493
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||||| ||||||| | ||| |||||||  || ||   | ||| |||||||||||||||||    
T  5254273 gtgggccgatcacttttaatttgagatcgggagtctgctctttggttcaagttggttttcgggcttttgttttgtgctttttcggtggatcggaggtcga 5254372  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttct 840  Q
    ||||  |||||| ||| ||| || ||||  | |||||||| |  ||||||||||| |  |||||| | || || |||||   ||||||| |||||| | |    
T  5254373 gaggttgtggaagctgcatgttcattcggtttggagcttttcgaatgtggctcagtttgggtgttgaagtctgagagtt---ttttgaggggtgttcttt 5254469  T
Q  841 aacgggtgagtagtgacgatgggtggt 867  Q
       ||||||||||||||||||||||||    
T  5254470 ---gggtgagtagtgacgatgggtggt 5254493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 639 - 773
Target Start/End: Original strand, 27739988 - 27740122
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||| |||||||||| |||||| ||||||||  || || ||||||| ||| ||||| || || |||| |||||| |||||| | |||||    
T  27739988 tctggtgggccgatcgcttttgattcaagatcgagagtcagtgtttcggttcaagtttggtcttggg-ttgttttggtgttctttcggtggaccagaggt 27740086  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     |||||| |||||||||||| |||||| | ||||||    
T  27740087 tgagaggtggtggaaactgattgatctatggaatag 27740122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 10524110 - 10524184
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtca----gttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||||||||||||||||||||||||||||||||     ||||||| |||||||| | |||||||||||    
T  10524110 tctggtgggccgatcacttttgattcgagatcgggagtcaatatattctttgactcaagttggtttttgggcttt 10524184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 814 - 897
Target Start/End: Original strand, 13337448 - 13337534
Alignment:
Q  814 ggagttttattttgagtggtgtttt-ctaacggg-tgagtagtgacgatgggtggtggatatcatttta-cgtggtcgtttcatgag 897  Q
    |||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| |||||||| ||||| ||||||| |||| ||||    
T  13337448 ggagttttattttgaggggtgtttttctaagggggtgagtagtgacgatgggtgatggatatcgttttaccgtggtcttttcgtgag 13337534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 639 - 711
Target Start/End: Complemental strand, 25504977 - 25504904
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggcttttt 711  Q
    |||||||| || ||| ||||| ||||||||||||||||||||||||||| ||| | || |||||||||||||||    
T  25504977 tctggtggacctatcgcttttaattcgagatcgggagtcagttctttggttcaggttttggttttgggcttttt 25504904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 675
Target Start/End: Complemental strand, 4162088 - 4162052
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||||||||||||||||||||||||||||||||||    
T  4162088 tctggtgggccgatcacttttgattcgagatcgggag 4162052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 639 - 685
Target Start/End: Original strand, 23650398 - 23650444
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttcttt 685  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||    
T  23650398 tctggtgggctgatcgcttttgattcgagatcgggagtcatttcttt 23650444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 675
Target Start/End: Complemental strand, 9560854 - 9560820
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggag 675  Q
    |||||| ||||||||||||||||||||||||||||    
T  9560854 tggtggaccgatcacttttgattcgagatcgggag 9560820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 647 - 701
Target Start/End: Complemental strand, 27880189 - 27880135
Alignment:
Q  647 gccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttt 701  Q
    |||||||  ||||||||||||||||| |||||||| ||||| ||||||| |||||    
T  27880189 gccgatcgattttgattcgagatcggaagtcagttatttggttcaagtttggttt 27880135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 644 - 694
Target Start/End: Complemental strand, 42048279 - 42048229
Alignment:
Q  644 tgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagt 694  Q
    ||||| ||||||||||||||||||| |||||| ||||| |||| |||||||    
T  42048279 tgggctgatcacttttgattcgagaccgggagccagttttttgactcaagt 42048229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 672
Target Start/End: Complemental strand, 23665468 - 23665439
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgg 672  Q
    ||||||||||||||||||||||||||||||    
T  23665468 gtgggccgatcacttttgattcgagatcgg 23665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 6e-52; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 645 - 809
Target Start/End: Original strand, 27102210 - 27102373
Alignment:
Q  645 gggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgagagg 744  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27102210 gggccgatcacttttgattcgagatcgggagtcagttctttggatcaagtttggttttgggctttttacggtttctttcggtggatcggaggtcgagagg 27102309  T
Q  745 aggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcagg 809  Q
     ||||||| ||||||||||||||  |||||||| || | | |||||||||||| | |||||||||    
T  27102310 tggtggaagctgaatgatctttcagataggagcgtttc-gttgtggctcagctttagtgttcagg 27102373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 639 - 805
Target Start/End: Complemental strand, 6583284 - 6583118
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||| |||  || ||||||  |||||||||||||||||| |||| ||||||||||    
T  6583284 tctggtggaccgatcacttttgattcgagatcggcagtcaattctttggatcagttttggttttttgctttttatggtttctttcggtgaatcggaggtc 6583185  T
Q  739 gagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    |||||| ||||||| |||| |||||||||  ||||||||||| | |||| ||||||||| |||||||    
T  6583184 gagaggtggtggaagctgattgatctttcagataggagcttttcggatgcggctcagctttggtgtt 6583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 639 - 820
Target Start/End: Original strand, 34774884 - 34775067
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttcttt-ggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||| |||| || ||||||    
T  34774884 tctggtggaccgatcacttttgat-cgagatcgggagtcagtttttttggctcaagtttagttttgggctttttatggtttctttcggtgaattggaggt 34774982  T
Q  738 cgagaggaggtggaaactgaatga-tctttcgaataggag-ctttccagatgtggctcagctctggtgttcaggtttgggagttt 820  Q
     |||||| ||||||| |||| ||| | ||||  |||||||  ||||| |||||||||||||| ||||||| ||| ||||||||||    
T  34774983 tgagaggtggtggaagctgattgattgtttcagataggagtttttccggatgtggctcagctttggtgttgaggattgggagttt 34775067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 640 - 751
Target Start/End: Complemental strand, 32864628 - 32864517
Alignment:
Q  640 ctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcg 739  Q
    |||||||||| ||||||||| |||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  32864628 ctggtgggccaatcacttttaattcgagatcggaagtcggttctttgactcaagtttggttttgggctttttatggtttctttttgtggatcagaggtcg 32864529  T
Q  740 agaggaggtgga 751  Q
     |||| ||||||    
T  32864528 ggaggtggtgga 32864517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 637 - 879
Target Start/End: Complemental strand, 10785529 - 10785286
Alignment:
Q  637 tttctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggagg 736  Q
    |||| ||||||||| | | ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||| ||||| |||||||    
T  10785529 tttccggtgggccggttaattttgcttcgagatcgggagtcagttgtttggctcaagtttggttttgggctttttatgattt-tttcggtggttcggagg 10785431  T
Q  737 tcgagaggaggtggaaactgaatgatctt-tcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgt 835  Q
    ||| |||| ||||||| ||||||||| || ||  ||||||||||| | | || ||||| ||| |||| |  |||  || ||||||  ||||||| ||||     
T  10785430 tcgcgaggtggtggaagctgaatgattttctctgataggagcttttcgggtgcggctctgctttggtatcgaggactgagagtttatttttgaggggtg- 10785332  T
Q  836 tttctaacggg-tgagtagtgacgatgggtgg-tggatatcatttt 879  Q
    |||||  |||| |||||||||||||||||||| |||||||| ||||    
T  10785331 tttcttgcgggatgagtagtgacgatgggtggttggatatcgtttt 10785286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 697 - 806
Target Start/End: Complemental strand, 31291029 - 31290920
Alignment:
Q  697 ggttttgggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagc 796  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||  |||||||||| ||||||||||| | |||||||||||||    
T  31291029 ggttttgggctttttatggtttctttcggtggatcggaggtcgagaggtggtggaagttgcttgatctttcggataggagcttttcggatgtggctcagc 31290930  T
Q  797 tctggtgttc 806  Q
    | ||||||||    
T  31290929 tttggtgttc 31290920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 639 - 867
Target Start/End: Original strand, 24658942 - 24659170
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||  || ||   ||||| |||||||||||||    
T  24658942 tctggtgggccaatcacttttgattcgagatcgggagtcagctctttggctgaagttggtttttgggctttggttttgtgctctttcggtggatcggagg 24659041  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||||||  |||||| |   ||| || ||||  ||| |||||| |  |||||||||||| ||||   | | || |||||||||||||||||| ||||||    
T  24659042 tcgagaggttgtggaagcatcatgttcattcggttagaagcttttcgaatgtggctcagc-ctgggagttaagtctgggagttttattttgaggggtgtt 24659140  T
Q  837 ttctaacgggtgagtagtgacgatgggtggt 867  Q
     | |   ||||||||||||||||||||||||    
T  24659141 at-ttgggggtgagtagtgacgatgggtggt 24659170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 639 - 744
Target Start/End: Original strand, 41920465 - 41920571
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| | | ||  ||||| ||||||||||||||    
T  41920465 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggattttgggctttgtgttgtgctctttcggtggatcggaggt 41920564  T
Q  738 cgagagg 744  Q
    || ||||    
T  41920565 cgcgagg 41920571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 643 - 860
Target Start/End: Complemental strand, 27031904 - 27031687
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggaggtcga 740  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | ||| ||| |||  || ||   ||||| |||||||||||||| ||    
T  27031904 gtgggccgatcacttttgattcgagatcgagagtcagctctttggctcaagttggttttagggattttgttttgtgctctttcggtggatcggaggttga 27031805  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgttttct 840  Q
    ||||  |||||| ||| ||| || ||||  || ||||||| |  ||||||||||| |  | |||| | || |||||||||||||||||| |||||| |||    
T  27031804 gaggttgtggaagctgcatgttcattcggttaagagcttttcgaatgtggctcagtttggatgttgaagtctgggagttttattttgaggggtgttctct 27031705  T
Q  841 aacgggtgagtagtgacgat 860  Q
       |||||||||||||||||    
T  27031704 --ggggtgagtagtgacgat 27031687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 639 - 867
Target Start/End: Original strand, 7857666 - 7857895
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||| | |||||| ||||  || ||   ||||| |||||||||| ||    
T  7857666 tctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgctgaagttggtttttggccttttgttttgtgctctttcggtggatcggtgg 7857765  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||||||  |||||| |||  ||  | ||||  ||||||||||  | ||||||||||| |  |||||| | || |||||||||||||||||| ||||||    
T  7857766 tcgagaggttgtggaagctgcttgtccattcggttaggagcttttgaaatgtggctcagtttgggtgttgaagtctgggagttttattttgaggggtgtt 7857865  T
Q  837 ttctaacgggtgagtagtgacgatgggtggt 867  Q
     | |   |||||||||||| |||||||||||    
T  7857866 ctat-gggggtgagtagtggcgatgggtggt 7857895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 641 - 804
Target Start/End: Original strand, 16147570 - 16147736
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttttt-atggt--ttcttttggtggatcggaggt 737  Q
    ||||||| |||| | ||||||||| | |||||||||||||||||||| ||||||| | |||||| |||||| |||||  |||||| ||| ||||||||||    
T  16147570 tggtgggacgatgaattttgattcaatatcgggagtcagttctttgggtcaagtttgattttggacttttttatggtatttctttcggtagatcggaggt 16147669  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgt 804  Q
     |||||| |||| ||  |||||||||||||  ||| ||||||| | |||||||||||||| ||||||    
T  16147670 ggagaggtggtgaaagttgaatgatctttcagatatgagcttttcggatgtggctcagctttggtgt 16147736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 772
Target Start/End: Original strand, 19598649 - 19598782
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| | ||||||| |||||||||| |||||| |||||  |||||||    
T  19598649 tctggtgggccgatcgcttttgattcgagatcgagagtcagttctttgactcaagtttgattttggg-tttttatggtgttctttcggtggtccggaggt 19598747  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaata 772  Q
     | |||| |||||||  ||| |||||||| |||||    
T  19598748 tgtgaggtggtggaagttgattgatctttagaata 19598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 31585828 - 31585758
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  31585828 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgactcaagttggtttttgggcttt 31585758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 639 - 709
Target Start/End: Complemental strand, 46692887 - 46692817
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  46692887 tctggtgggccgatcacttttgattcgagatcgggagttagttctttggctcaagttggtttttgggcttt 46692817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 639 - 836
Target Start/End: Complemental strand, 46814535 - 46814336
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||  || ||   ||||| ||||||||||| |    
T  46814535 tctggtgggccgatcacttttgattcgagatcgggagtcagctttttggctcaagttggttttttggcttttgttttgtgctctttcggtggatcggatg 46814436  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgagtggtgtt 836  Q
    ||||||||  |  ||| ||| | | || ||||| |||||||||| |  ||||||||| ||   |||||| | || |||||||||||||| ||| ||||||    
T  46814435 tcgagaggttgcagaagctgcaagttcattcgattaggagcttttcgaatgtggctcggcgtgggtgttgaagtatgggagttttatttcgaggggtgtt 46814336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 639 - 711
Target Start/End: Original strand, 17033599 - 17033672
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggcttttt 711  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  17033599 tctggtgggccgatcacttttgaatcgagatcgggagtcagttctttggttcaagttttggttttgggcttttt 17033672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 639 - 794
Target Start/End: Original strand, 4651793 - 4651947
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggt 737  Q
    ||||| |||||||||||||||||||||||||||||||||||| || ||| || |||| ||||||||||||||| |||| ||| || |||||| |||||||    
T  4651793 tctggggggccgatcacttttgattcgagatcgggagtcagt-ctctggttctagtttggttttgggcttttt-tggtgttccttcggtggaccggaggt 4651890  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctca 794  Q
     | | || ||||||| ||||||||||||| ||  ||||| | | | |||||||||||    
T  4651891 tgcgcggtggtggaagctgaatgatctttagagaaggagttcttcggatgtggctca 4651947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 645 - 709
Target Start/End: Complemental strand, 5389483 - 5389419
Alignment:
Q  645 gggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  5389483 gggccgatcacttttgattcgagatcgggagtcagttctttgactcaagtttgtttttgggcttt 5389419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 643 - 709
Target Start/End: Complemental strand, 30685968 - 30685902
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||||||||||    
T  30685968 gtgggccgatcacttttgatttgagatcgggagtcagttctttgactcaagttggcttttgggcttt 30685902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 641 - 744
Target Start/End: Complemental strand, 24449996 - 24449892
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtcg 739  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| || ||||| | ||||||| ||| | | ||  ||||||||||||||||||||||    
T  24449996 tggtgggccgatcacttttgatttgagatcggaagtcagttctttgtcttaagttggtttttgggatttgtgttgtgctcttttggtggatcggaggtcg 24449897  T
Q  740 agagg 744  Q
     ||||    
T  24449896 cgagg 24449892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 704 - 838
Target Start/End: Complemental strand, 9313310 - 9313177
Alignment:
Q  704 ggctttttatggtttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtg 803  Q
    ||||||||||||||||||| |||||||||||||| || ||| ||||| |  || |||||| ||| |||| ||| ||| | |||||||||||||| ||||     
T  9313310 ggctttttatggtttctttcggtggatcggaggtggataggtggtggcagttgtatgatccttcaaatacgagtttttcggatgtggctcagctttggt- 9313212  T
Q  804 ttcaggtttgggagttttattttgagtggtgtttt 838  Q
    ||||||  ||||||||| |||||||  ||||||||    
T  9313211 ttcaggactgggagtttaattttgaagggtgtttt 9313177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 744
Target Start/End: Complemental strand, 24684546 - 24684439
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt--ttatggtttcttttggtggatcggagg 736  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||| ||| |||| | |||||||||||  || ||   ||||| |||||||||||||    
T  24684546 tctggtgggccgatcacttttaattcgagatcggatgtcagttctttgactctagttggtttttgggcttttgttttgtgctctttcggtggatcggagg 24684447  T
Q  737 tcgagagg 744  Q
    ||| ||||    
T  24684446 tcgcgagg 24684439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 38544806 - 38544758
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 687  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38544806 tctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 38544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 642 - 778
Target Start/End: Complemental strand, 50589272 - 50589136
Alignment:
Q  642 ggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcgag 741  Q
    ||||||| |||| |||||||||||| |||||||| |||||||||||| |||||| |||||||||||| ||  |  |||||| |||||| | ||||| | |    
T  50589272 ggtgggctgatcgcttttgattcgaaatcgggagccagttctttggcccaagtttggttttgggcttatttagtgttctttcggtggaccagaggttgtg 50589173  T
Q  742 aggaggtggaaactgaatgatctttcgaataggagct 778  Q
    ||| ||| |||  ||| |||||||| |||||| ||||    
T  50589172 aggtggtagaagttgattgatctttggaatagtagct 50589136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 639 - 709
Target Start/End: Original strand, 5459174 - 5459244
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggcttt 709  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||  |||||||   |||||||||||    
T  5459174 tctggtgggccgatcacttttgattcgagatcgggagtcaattatttgattcaagttgatttttgggcttt 5459244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 643 - 689
Target Start/End: Complemental strand, 9313353 - 9313307
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggct 689  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  9313353 gtgggctgatcacttttgattcgagatcgggagtcagttctttggct 9313307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 717 - 803
Target Start/End: Original strand, 16577352 - 16577438
Alignment:
Q  717 ttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtg 803  Q
    |||||| ||| ||| |||||| |||||| ||||||| ||||||||||||| ||||||||||||| | ||||||||||| || |||||    
T  16577352 ttctttcggtagattggaggttgagaggtggtggaagctgaatgatctttggaataggagcttttcggatgtggctcaactttggtg 16577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 15840980 - 15840938
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  15840980 tctggtgggctgatcacttttgattcgagatcgggagtcagtt 15840938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 639 - 773
Target Start/End: Original strand, 42374176 - 42374311
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaag-ttaggttttgggctttttatggtttcttttggtggatcggaggt 737  Q
    |||||||| |||||| ||||||||| ||||||||||||||||  ||||| ||||| || |||||||||||| ||  |  |||||| ||   | ||||| |    
T  42374176 tctggtggaccgatcgcttttgatttgagatcgggagtcagtcttttggttcaagttttggttttgggcttgtttggcgttctttcggcataccggagat 42374275  T
Q  738 cgagaggaggtggaaactgaatgatctttcgaatag 773  Q
     |||||| ||||||| |||| |||||||| ||||||    
T  42374276 tgagaggtggtggaagctgattgatctttagaatag 42374311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 681
Target Start/End: Original strand, 30655577 - 30655615
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30655577 gtgggccgatcgcttttgattcgagatcgggagtcagtt 30655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 761
Target Start/End: Original strand, 27905425 - 27905542
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||| ||||||||||||||||||||||| | ||| |||||||||  ||| |||  |||||||||    |||||| | ||| |||||| |||||||     
T  27905425 tctggtggaccgatcacttttgattcgagatcagaagttagttctttgattcatgttttgttttgggc----tatggtgt-tttcggtggaccggaggtt 27905519  T
Q  739 gagaggaggtggaaactgaatga 761  Q
    |||||| ||||||| ||| ||||    
T  27905520 gagaggtggtggaagctgtatga 27905542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 692
Target Start/End: Original strand, 46603405 - 46603458
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaa 692  Q
    |||||||||||  || ||||||||||||||||| ||||||||||||||| ||||    
T  46603405 tctggtgggccattcgcttttgattcgagatcgagagtcagttctttggttcaa 46603458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 803
Target Start/End: Complemental strand, 41126458 - 41126379
Alignment:
Q  724 ggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtg 803  Q
    ||||||| |||||| |||||| | ||||| ||||| ||||||| | ||||||||||| ||||||||| ||| || |||||    
T  41126458 ggtggattggaggttgagaggtgctggaagctgaacgatcttttggataggagcttttcagatgtggatcaactttggtg 41126379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 707
Target Start/End: Complemental strand, 9081563 - 9081506
Alignment:
Q  649 cgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggct 707  Q
    ||||||||||||||||||||||||||| |||| |||| | ||||||| | |||||||||    
T  9081563 cgatcacttttgattcgagatcgggagccagtgctttag-tcaagtttgcttttgggct 9081506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 680
Target Start/End: Original strand, 42374048 - 42374090
Alignment:
Q  638 ttctggtgggccgatcacttttgattcgagatcgggagtcagt 680  Q
    ||||||||| ||| | |||||||||||||||||||||||||||    
T  42374048 ttctggtggaccggttacttttgattcgagatcgggagtcagt 42374090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 805
Target Start/End: Original strand, 32882463 - 32882552
Alignment:
Q  716 tttcttttggtggatcggaggtcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    ||||||| |||| ||||||| |||| ||| |||| || || ||||||||||||   ||||||||| |  ||||||||||||| |||||||    
T  32882463 tttctttcggtgaatcggagatcgacaggtggtgaaagcttaatgatctttcggtcaggagcttttcgaatgtggctcagctttggtgtt 32882552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 639 - 805
Target Start/End: Original strand, 19396 - 19563
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  19396 tctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggctttttatggtttctttcggtggatcggaggtc 19495  T
Q  739 gagaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    |||||  ||||||| |||||| ||| ||||| | ||||||||| |  ||||||||| ||| |||||||    
T  19496 gagagttggtggaagctgaataatcttttcggacaggagcttttcgaatgtggctctgctttggtgtt 19563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 100; Significance: 6e-49; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 639 - 805
Target Start/End: Complemental strand, 42206 - 42039
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  42206 tctggtgggccgatcacttttgattcgagatcggaagtcagttctttggctcaagtttggttttgggatttttatggtttctttcagtggatcggaggtc 42107  T
Q  739 gagaggaggtggaaactgaatgatc-tttcgaataggagctttccagatgtggctcagctctggtgtt 805  Q
    |||||  ||||||| |||||| ||| ||||| ||||||||||| |  ||||||||| ||| |||||||    
T  42106 gagagttggtggaagctgaataatcttttcggataggagcttttcgaatgtggctctgctttggtgtt 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 93; Significance: 9e-45; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 641 - 829
Target Start/End: Original strand, 58142 - 58330
Alignment:
Q  641 tggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtggatcggaggtcga 740  Q
    |||||||||||||||||||||||| ||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  58142 tggtgggccgatcacttttgattcaagatcggaagtcaattgtttggatcaagtttggttttaggctttttatggtttctttcggtggatcggaggtcga 58241  T
Q  741 gaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcaggtttgggagttttattttgag 829  Q
    |||  | ||||| |||||| |||||||| ||| ||||||| |  ||||||||||||| |||||||| ||  || |||||| ||||||||    
T  58242 gagatgatggaagctgaattatctttcggataagagcttttcgaatgtggctcagctttggtgttcgggactgagagtttaattttgag 58330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 639 - 809
Target Start/End: Original strand, 36720 - 36892
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagtta--ggttttgggctttttatggtttcttttggtggatcggagg 736  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||   |||||||| ||||||||| ||||||| |||||||||||||    
T  36720 tctggcgggctgatcacttttgattcgagatcgggagtcagttctttgtctcaactttttggttttggtctttttatgatttctttcggtggatcggagg 36819  T
Q  737 tcgagaggaggtggaaactgaatgatctttcgaataggagctttccagatgtggctcagctctggtgttcagg 809  Q
    |||||| | |||||||  |||||| |||||||  |||||||||| |   |||||||||||| |||||||||||    
T  36820 tcgagatgtggtggaagttgaatggtctttcggttaggagcttttcgattgtggctcagctttggtgttcagg 36892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 639 - 687
Target Start/End: Complemental strand, 1085 - 1037
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 687  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1085 tctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 643 - 738
Target Start/End: Complemental strand, 35835 - 35740
Alignment:
Q  643 gtgggccgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggt-ttcttttggtggatcggaggtc 738  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || ||||| | ||||||||||| | | ||  ||||| |||||||||||||||    
T  35835 gtgggccgatcacttttgattcgagatcgggagtca-ttctttgacttaagttggtttttgggctttatgttgtgctctttcggtggatcggaggtc 35740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 3843 - 3885
Alignment:
Q  639 tctggtgggccgatcacttttgattcgagatcgggagtcagtt 681  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3843 tctggtgggccgatcaattttgattcgagatcgggagtcagtt 3885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 649 - 728
Target Start/End: Original strand, 6581 - 6660
Alignment:
Q  649 cgatcacttttgattcgagatcgggagtcagttctttggctcaagttaggttttgggctttttatggtttcttttggtgg 728  Q
    ||||| |||||||||| |||| || ||| |||||||||||||||||| |||||| |||||||| ||  |||||| |||||    
T  6581 cgatctcttttgattcaagattggtagttagttctttggctcaagtttggtttttggctttttttgtgttctttcggtgg 6660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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