View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2629_high_1 (Length: 249)
Name: NF2629_high_1
Description: NF2629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2629_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 35293216 - 35293000
Alignment:
| Q |
15 |
aacacgtagagaatcctcaagttggaaatcacataacacacaattggtttgacaatccacactttgtatcattaaaa-gttaaattctagtaggaatgaa |
113 |
Q |
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| T |
35293216 |
aacacgtagagaatcctcaagttggaaatcacataacacacaattggtttgacaatccacactt-gtatcattaaaaagttaaattctagtaggaatgaa |
35293118 |
T |
|
| Q |
114 |
attcctaaaaatgccattcactagagactttgaggaagtcggtatcaatgagttattgagtgcaaaaacgtctatcattgtcaactgaatcaaatagtga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35293117 |
attcctaaaaatgccattcactagagactttgaggaagtcggtatcaatgagttattgagtgcaaaaacgtctatcattgtcaactgaatcaaatagtga |
35293018 |
T |
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| Q |
214 |
tgtgataaaaatccttgc |
231 |
Q |
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|||||||||||||||||| |
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| T |
35293017 |
tgtgataaaaatccttgc |
35293000 |
T |
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