View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2629_high_10 (Length: 276)
Name: NF2629_high_10
Description: NF2629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2629_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 34134881 - 34135049
Alignment:
| Q |
81 |
caagattatcatggtgtgagtaaactaagttattcgtgaactataagcttgatttgttaaattatttgtttaattaaacaaacaagtcgatgcttatgat |
180 |
Q |
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| T |
34134881 |
caagattatcatggtgtgagtaaactaagttattcgtgaactataagcttgatttgttaaattatttgtttaattaaacaaacaagtcgatgcttatgat |
34134980 |
T |
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| Q |
181 |
atgagttaattaattaaactattgaagtgaaaggcttacataatannnnnnngatgaaacatacctttg |
249 |
Q |
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| T |
34134981 |
atgagttaattaattaaactattgaagtgaaaggcttacataatatttttttgatgaaacatacctttg |
34135049 |
T |
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