View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2629_high_3 (Length: 624)

Name: NF2629_high_3
Description: NF2629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2629_high_3
NF2629_high_3
[»] chr8 (4 HSPs)
chr8 (250-397)||(7274782-7274929)
chr8 (31-164)||(7274926-7275062)
chr8 (359-406)||(23241082-23241129)
chr8 (371-501)||(19400551-19400683)
[»] chr3 (4 HSPs)
chr3 (241-603)||(27427658-27428023)
chr3 (209-302)||(28696526-28696619)
chr3 (453-539)||(2550873-2550959)
chr3 (453-539)||(13846699-13846785)
[»] chr6 (3 HSPs)
chr6 (359-476)||(6346078-6346194)
chr6 (454-539)||(17718597-17718682)
chr6 (339-400)||(17536953-17537014)
[»] chr7 (5 HSPs)
chr7 (368-481)||(2046708-2046820)
chr7 (209-302)||(3367607-3367700)
chr7 (509-611)||(24509267-24509370)
chr7 (509-605)||(24511242-24511339)
chr7 (453-563)||(9241357-9241467)
[»] chr4 (3 HSPs)
chr4 (209-302)||(54188519-54188612)
chr4 (209-302)||(8570566-8570659)
chr4 (365-435)||(2549588-2549658)
[»] chr2 (2 HSPs)
chr2 (367-489)||(38695560-38695688)
chr2 (453-563)||(15514656-15514765)
[»] chr5 (3 HSPs)
chr5 (509-606)||(15162696-15162794)
chr5 (453-563)||(17038719-17038829)
chr5 (356-410)||(34051133-34051187)
[»] chr1 (3 HSPs)
chr1 (529-606)||(23544451-23544528)
chr1 (442-485)||(51760799-51760842)
chr1 (107-147)||(23545279-23545319)


Alignment Details
Target: chr8 (Bit Score: 132; Significance: 3e-68; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 250 - 397
Target Start/End: Complemental strand, 7274929 - 7274782
Alignment:
Q  250 ataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttagaaaacaagttaaagaacaattacttctgtcttgaacgatgcaactgc 349  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7274929 ataatttcactcaataaaatttgactgtgttttacaattgtatgcgtatttagaaaataagttaaagaacaattacttctgtcttgaacgatgcaactgc 7274830  T
Q  350 catcaggaatatctccttagaaatttgtttcagtttgtgtttagtgat 397  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7274829 catcaggaatatctccctagaaatttgtttcagtttgtgtttagtgat 7274782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 7275062 - 7274926
Alignment:
Q  31 ttaatcttttgtattgacagtaacaccgttgaacgaacagcaccgtccctaaaggctttcgaagaaattgggt---acaagagaggtgtacgaagagaag 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||   |||||||||||||||||||||||     
T  7275062 ttaatcttttgtattggcagtaacaccgttgaacgaacagcaccatccctaaaggccttcgaagaaattgggtacaacaagagaggtgtacgaagagaat 7274963  T
Q  128 tggaggaatggaaatctccatcacgttccaaccataa 164  Q
    |||||||||||||||||||||||||||||||||||||    
T  7274962 tggaggaatggaaatctccatcacgttccaaccataa 7274926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 406
Target Start/End: Original strand, 23241082 - 23241129
Alignment:
Q  359 tatctccttagaaatttgtttcagtttgtgtttagtgatcttaatatt 406  Q
    |||||||||||||||  ||| || ||||||||||||||||||||||||    
T  23241082 tatctccttagaaatccgttgcaatttgtgtttagtgatcttaatatt 23241129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 501
Target Start/End: Original strand, 19400551 - 19400683
Alignment:
Q  371 aatttgtttcagtttgtgtttagtgatcttaatattgtatcagaattatagttaatgagaatttggtattgaattttattgatt--gtgttattgaactc 468  Q
    ||||||||| | |||| ||||||| |||||||   ||||||||||| | | ||||||| ||||| | ||  |||| ||||||||  ||||||||||||||    
T  19400551 aatttgtttaaatttgagtttagtaatcttaaagctgtatcagaatgaaaattaatgataatttaggatgaaattgtattgattttgtgttattgaactc 19400650  T
Q  469 aaattctagtaatatttttatagtgtgaatttt 501  Q
    ||| | || |||||||  ||| || ||||||||    
T  19400651 aaagtttaataatattcatattgtatgaatttt 19400683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 241 - 603
Target Start/End: Complemental strand, 27428023 - 27427658
Alignment:
Q  241 aggtgtttaataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttagaaaacaagttaaagaacaattacttctgtcttgaacga 340  Q
    |||||||| ||||||| | |||||||||||||||| | |||||||||  | | | | ||||| ||| |||| || |||| || |||||||||||||| ||    
T  27428023 aggtgtttcataatttgaatcaataaaatttgactctattttgcaatcattttcttgtttaggaaagaagtgaatgaactataacttctgtcttgaagga 27427924  T
Q  341 tgcaactgccatca-ggaatatctccttagaaatttgtttcagtttgtgtttagtgatcttaatattgtatcagaattatagttaatgagaatttggtat 439  Q
    ||| |||||  ||| |||  ||||||  |||||||| ||||| |||||||||||||| ||| || ||||||  ||||||   ||||||| ||||||| ||    
T  27427923 tgccactgctgtcatggagcatctcccaagaaatttatttcaatttgtgtttagtgaccttcatgttgtattggaattaatattaatgacaatttgggat 27427824  T
Q  440 tgaattttattgatt--gtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaatagg 537  Q
    |||||||||||||||  |||||||||||  ||||||||| ||||||| |||| || ||| || | |||   |||||||||||| || || ||||||||||    
T  27427823 tgaattttattgattttgtgttattgaatacaaattctaataatattcttattgtatgagttctctttacttattcttttggttcacttgattgaatagg 27427724  T
Q  538 ctagttccaggattggtggaatgcttagtgcagttcatggtttgaatagtggtaattttagtttgg 603  Q
    ||||||||  ||||  | |||| ||||||||||||||||| ||||||| ||||| |||||||||||    
T  27427723 ctagttccgcgattatttgaattcttagtgcagttcatgggttgaataatggtagttttagtttgg 27427658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 28696526 - 28696619
Alignment:
Q  209 ttctttagcaatgtattattgtgtcgcgtacaaggtgtttaataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttag 302  Q
    ||||||||||| |||||||||||  || ||  |||||||  ||||||| || |||| |||||||||| |||||||||||||| ||| |||||||    
T  28696526 ttctttagcaaggtattattgtgctgcctatcaggtgttcgataatttgacgcaatgaaatttgactatgttttgcaattgtgtgcttatttag 28696619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 453 - 539
Target Start/End: Complemental strand, 2550959 - 2550873
Alignment:
Q  453 ttgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggct 539  Q
    |||||||||||||||||| ||||| ||||||| ||||  | |||||| | ||||  ||||||||||||   ||| ||||||||||||    
T  2550959 ttgtgttattgaactcaatttctaataatattcttattttatgaattatctttgcttattcttttggtgtgtttgattgaataggct 2550873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 453 - 539
Target Start/End: Complemental strand, 13846785 - 13846699
Alignment:
Q  453 ttgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggct 539  Q
    |||||||||||||||||| ||||| ||||||| ||||  | |||||| | ||||  ||||||||||||   ||| ||||||||||||    
T  13846785 ttgtgttattgaactcaatttctaataatattcttattttatgaattatctttgcttattcttttggtgtgtttgattgaataggct 13846699  T

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Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 476
Target Start/End: Original strand, 6346078 - 6346194
Alignment:
Q  359 tatctccttagaaatttgtttcagtttgtgtttagtgatcttaatattgtatcagaattatagttaatgagaatttggtattgaattttattgattgtgt 458  Q
    ||||||| ||||||| |||| || |||||||||||| ||||||||||| |||   ||| ||| |||||||||| |||| |||||||||||||||||||||    
T  6346078 tatctccatagaaatctgttgcaatttgtgtttagttatcttaatattttatggcaatgata-ttaatgagaaattgggattgaattttattgattgtgt 6346176  T
Q  459 tattgaactcaaattcta 476  Q
    ||||||||||||| ||||    
T  6346177 tattgaactcaaactcta 6346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 539
Target Start/End: Original strand, 17718597 - 17718682
Alignment:
Q  454 tgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggct 539  Q
    ||||||||||||||||| ||||| ||||||| |||| || |||||| | ||||  ||||||||||||   ||| ||||||||||||    
T  17718597 tgtgttattgaactcaatttctaataatattcttattgtatgaattatctttgcttattcttttggtgtgtttgattgaataggct 17718682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Complemental strand, 17537014 - 17536953
Alignment:
Q  339 gatgcaactgccatcaggaatatctccttagaaatttgtttcagtttgtgtttagtgatctt 400  Q
    ||||| |||||||||| || ||||| | ||||||||  ||||| ||||||||||||||||||    
T  17537014 gatgccactgccatcatgagtatcttcctagaaattcatttcaatttgtgtttagtgatctt 17536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 481
Target Start/End: Original strand, 2046708 - 2046820
Alignment:
Q  368 agaaatttgtttcagtttgtgtttagtgatcttaatattgtatcagaattatagttaatgagaatttggtattgaattttattga--ttgtgttattgaa 465  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||| | |   ||||||||||  ||| |||||||||||||||  |||||||||||||    
T  2046708 agaaattcgattcaatttgtgtttagtgatcttaatattgtatcagagtca---ttaatgagaacatgggattgaattttattgattttgtgttattgaa 2046804  T
Q  466 ctcaaattctagtaat 481  Q
     |||||||||| ||||    
T  2046805 atcaaattctaataat 2046820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 209 - 302
Target Start/End: Complemental strand, 3367700 - 3367607
Alignment:
Q  209 ttctttagcaatgtattattgtgtcgcgtacaaggtgtttaataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttag 302  Q
    ||||||||||| |||||||||||  || ||  |||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3367700 ttctttagcaaggtattattgtgctgcctatcaggtgtttgataatttgactcaatgaaatttgactgtgttttgcaattgtgtgcttatttag 3367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 611
Target Start/End: Original strand, 24509267 - 24509370
Alignment:
Q  509 tattcttttggtacatttcattgaataggctagttccaggattggtggaat-gcttagtgcagttcatggtttgaatagtggtaattttagtttggtttt 607  Q
    |||||||||||| |||||| || |||||||| | |||||||||||||||||   ||||||||||||||||||||| |  ||||||||||| ||||||||     
T  24509267 tattcttttggtgcatttcttttaataggctggctccaggattggtggaatattttagtgcagttcatggtttgagtcatggtaattttactttggtttc 24509366  T
Q  608 gttc 611  Q
    ||||    
T  24509367 gttc 24509370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 24511339 - 24511242
Alignment:
Q  509 tattcttttggtacatttcattgaataggctagttccaggattggtggaatgc-ttagtgcagttcatggtttgaatagtggtaattttagtttggtt 605  Q
    |||||||||||| |||||| ||||||||||| | ||| ||||||||||||||| |||| |  ||||||||||||| |  ||||||||||| |||||||    
T  24511339 tattcttttggtgcatttctttgaataggctggctccgggattggtggaatgctttagagatgttcatggtttgagtcatggtaattttactttggtt 24511242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 563
Target Start/End: Original strand, 9241357 - 9241467
Alignment:
Q  453 ttgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggctagttccaggattg 552  Q
    |||||||||||||||||| ||||| ||||||| ||||  | |||||| | ||||  ||||||||||||   ||| ||||||||||||    || ||||||    
T  9241357 ttgtgttattgaactcaatttctaataatattcttattttatgaattatctttgcttattcttttggtgtgtttgattgaataggctgaccccgggattg 9241456  T
Q  553 gtggaatgctt 563  Q
    |||||||||||    
T  9241457 gtggaatgctt 9241467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 302
Target Start/End: Complemental strand, 54188612 - 54188519
Alignment:
Q  209 ttctttagcaatgtattattgtgtcgcgtacaaggtgtttaataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttag 302  Q
    ||||||||||| |||||||||||  || ||  |||||||  ||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  54188612 ttctttagcaaggtattattgtgctgcctatcaggtgttcgataatttgactcaatgaaatttgactgtgttttgcaattgtgtgcttatttag 54188519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 8570566 - 8570659
Alignment:
Q  209 ttctttagcaatgtattattgtgtcgcgtacaaggtgtttaataatttcactcaataaaatttgactgtgttttgcaattgtatgcatatttag 302  Q
    ||||||||||| |||||||||||  || ||  |||||||  ||||||| || |||| |||||||||| |||||||||||||| ||| |||||||    
T  8570566 ttctttagcaaggtattattgtgctgcctatcaggtgttcgataatttgacgcaatgaaatttgactatgttttgcaattgtgtgcttatttag 8570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 435
Target Start/End: Complemental strand, 2549658 - 2549588
Alignment:
Q  365 cttagaaatttgtttcagtttgtgtttagtgatcttaatattgtatcagaattatagttaatgagaatttg 435  Q
    ||||| |||| |||||| ||||||| |||||||||||||||| ||||| |||||   ||||| ||||||||    
T  2549658 cttaggaattggtttcaatttgtgtatagtgatcttaatattatatcaaaattaatattaataagaatttg 2549588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 489
Target Start/End: Original strand, 38695560 - 38695688
Alignment:
Q  367 tagaaatttgtttcagtttgtgtttagtgatcttaatattgtatcagaatt----atagttaatgagaatttggtattgaattttattga--ttgtgtta 460  Q
    ||||||||  ||||| ||| |||||||||||||||||||||||||||||||    |||  ||||  ||| |||| |||||| || |||||  ||||||||    
T  38695560 tagaaattcatttcaatttctgtttagtgatcttaatattgtatcagaattcataatatataatttgaaattgggattgaacttcattgattttgtgtta 38695659  T
Q  461 ttgaactcaaattctagtaatatttttat 489  Q
    ||||||||||| |||| ||||||||||||    
T  38695660 ttgaactcaaactctaataatatttttat 38695688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 563
Target Start/End: Complemental strand, 15514765 - 15514656
Alignment:
Q  453 ttgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggctagttccaggattg 552  Q
    ||||||||||||| |||| ||||| ||||||| || | || |||||| | ||||  ||||||||||||  |||| |||||||| |||   ||||||||||    
T  15514765 ttgtgttattgaattcaatttctaataatattctttt-gtatgaattatctttgcttattcttttggtgtatttgattgaataagctgactccaggattg 15514667  T
Q  553 gtggaatgctt 563  Q
    |||||||||||    
T  15514666 gtggaatgctt 15514656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 509 - 606
Target Start/End: Complemental strand, 15162794 - 15162696
Alignment:
Q  509 tattcttttggtacatttcattgaataggctagttccaggattggtggaatgctt-agtgcagttcatggtttgaatagtggtaattttagtttggttt 606  Q
    |||||||||||| |||||| |||| |||||| | ||| |||||||||||||  || ||||||||||||||||| |||  ||||||||||| ||||||||    
T  15162794 tattcttttggtgcatttctttgagtaggcttgctccgggattggtggaattttttagtgcagttcatggttttaatcatggtaattttactttggttt 15162696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 563
Target Start/End: Complemental strand, 17038829 - 17038719
Alignment:
Q  453 ttgtgttattgaactcaaattctagtaatatttttatagtgtgaattttatttgtgtattcttttggtacatttcattgaataggctagttccag-gatt 551  Q
    |||||||||| ||||||| ||||| ||||||| |||| || | |||| | ||||  ||||||||||||   ||| |||||||||||| ||||| | ||||    
T  17038829 ttgtgttattcaactcaatttctaataatattcttattgtataaattatctttgcttattcttttggtgtgtttgattgaataggct-gttcccgagatt 17038731  T
Q  552 ggtggaatgctt 563  Q
    ||||||||||||    
T  17038730 ggtggaatgctt 17038719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 34051187 - 34051133
Alignment:
Q  356 gaatatctccttagaaatttgtttcagtttgtgtttagtgatcttaatattgtat 410  Q
    ||||| ||| |||||||||| ||||| |||||| ||| |||||||||||||||||    
T  34051187 gaataactcattagaaatttatttcaatttgtgattaatgatcttaatattgtat 34051133  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 606
Target Start/End: Complemental strand, 23544528 - 23544451
Alignment:
Q  529 ttgaataggctagttccaggattggtggaatgcttagtgcagttcatggtttgaatagtggtaattttagtttggttt 606  Q
    ||||||||| | | ||| || |||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||    
T  23544528 ttgaataggttggctccggggttggtggaatgcttagtgcagttcatggtttgaataatggtaagtttacttttgttt 23544451  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 485
Target Start/End: Complemental strand, 51760842 - 51760799
Alignment:
Q  442 aattttattgattgtgttattgaactcaaattctagtaatattt 485  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  51760842 aatttaattgattgtgttattgaactcaatttctaataatattt 51760799  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 23545319 - 23545279
Alignment:
Q  107 agagaggtgtacgaagagaagtggaggaatggaaatctcca 147  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  23545319 agagaggtgtacgaagagaaactgaggaatggaaatctcca 23545279  T

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