View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2629_high_6 (Length: 360)
Name: NF2629_high_6
Description: NF2629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2629_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 55101865 - 55102227
Alignment:
| Q |
1 |
ttcttacttcaggctagaataaattcttcaagaacttgaaattgtctgaataggatta---ttattattattttgattcatttacatatgcaatataatt |
97 |
Q |
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| T |
55101865 |
ttcttacttcaggctagaataaattcttcaagaacttgaaattgtctgaataggattattattattattattttgattcatttacatatgcaatataatt |
55101964 |
T |
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| Q |
98 |
gagtgtttccaattccacaggcaagggtgactcttgaaaaccatcatcaatatcggcatgtagacaaaccagggtggaaactaggatggacatgggctaa |
197 |
Q |
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| T |
55101965 |
gagtgtttccaattccacaggcaagggtgactcttgaaaaccatcatcaatatcggcatgtagacaaaccagggtggaaactaggatggacatgggctaa |
55102064 |
T |
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| Q |
198 |
taaggaggtgatatggtcaatgagtggtgcaattgcaactgataggggtgattgctcatcttatagtggttctcagatgccacattcatgcaaaaaagat |
297 |
Q |
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| T |
55102065 |
taaggaggtgatatggtcaatgagtggtgcaattgcaactgataggggtgattgctcatcttatagtggttctcagatgccacattcatgcaaaaaagat |
55102164 |
T |
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| Q |
298 |
ccaatcatagttgatatatctccagatgtgtcacaaaacaggtcagaccattgctgtcgtggt |
360 |
Q |
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| T |
55102165 |
ccaatcatagttgatatatctccagatgtgtcacaaaacaggtcagaccattgctgtcgtggt |
55102227 |
T |
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