View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2629_low_26 (Length: 215)
Name: NF2629_low_26
Description: NF2629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2629_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 34899903 - 34899975
Alignment:
| Q |
134 |
gagaagaactaaagagagatgtgtttatatgcatatatgtaaagtttggtagtttcaactttcaagttgagat |
206 |
Q |
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| T |
34899903 |
gagaagaactaaagagagatgtgtttatatgcatataggtaaagtttggtagtttcaactttcaagttgagat |
34899975 |
T |
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Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7254082 - 7254131
Alignment:
| Q |
1 |
aatgaggaaaatctttcgaaaacggtcatttgatttcgccaacaggattg |
50 |
Q |
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| T |
7254082 |
aatgaggaaaatctttccaaaacgttcatttgatttctccaacaggattg |
7254131 |
T |
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