View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2631_high_9 (Length: 351)

Name: NF2631_high_9
Description: NF2631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2631_high_9
NF2631_high_9
[»] chr8 (29 HSPs)
chr8 (189-351)||(30587220-30587382)
chr8 (279-351)||(1838389-1838461)
chr8 (134-177)||(36826960-36827003)
chr8 (136-177)||(26492412-26492453)
chr8 (134-178)||(44838768-44838812)
chr8 (84-119)||(30587183-30587218)
chr8 (136-175)||(35063457-35063496)
chr8 (132-178)||(41178060-41178106)
chr8 (134-175)||(9203489-9203530)
chr8 (136-177)||(9331285-9331326)
chr8 (136-177)||(35201979-35202020)
chr8 (5-45)||(30587099-30587139)
chr8 (134-177)||(8568923-8568966)
chr8 (135-178)||(43844719-43844762)
chr8 (297-351)||(473498-473552)
chr8 (135-177)||(16382421-16382463)
chr8 (135-177)||(43484035-43484077)
chr8 (135-177)||(44872368-44872410)
chr8 (135-176)||(2827351-2827392)
chr8 (136-177)||(3270568-3270609)
chr8 (136-177)||(3270717-3270758)
chr8 (135-176)||(5038980-5039021)
chr8 (137-178)||(7256884-7256925)
chr8 (136-177)||(24726031-24726072)
chr8 (134-175)||(36593564-36593605)
chr8 (136-177)||(44082046-44082087)
chr8 (135-191)||(40443613-40443669)
chr8 (136-164)||(40962056-40962084)
chr8 (136-176)||(41569605-41569645)
[»] chr7 (48 HSPs)
chr7 (280-351)||(7964486-7964557)
chr7 (135-177)||(21907286-21907328)
chr7 (135-177)||(26153910-26153952)
chr7 (135-177)||(35160852-35160894)
chr7 (136-177)||(39098291-39098332)
chr7 (136-175)||(40235134-40235173)
chr7 (134-176)||(11909258-11909300)
chr7 (136-178)||(25099532-25099574)
chr7 (135-177)||(25099639-25099681)
chr7 (135-177)||(26154018-26154060)
chr7 (135-176)||(5082671-5082712)
chr7 (136-177)||(6580501-6580542)
chr7 (135-176)||(22332292-22332333)
chr7 (136-169)||(22816515-22816548)
chr7 (134-175)||(30005870-30005911)
chr7 (136-177)||(34118452-34118493)
chr7 (132-177)||(35160741-35160786)
chr7 (136-176)||(16100267-16100307)
chr7 (134-178)||(39976146-39976190)
chr7 (133-177)||(48590578-48590622)
chr7 (134-177)||(4027321-4027364)
chr7 (134-177)||(13561123-13561166)
chr7 (134-177)||(14206433-14206476)
chr7 (134-177)||(14215123-14215166)
chr7 (134-177)||(36399889-36399932)
chr7 (135-178)||(39024058-39024101)
chr7 (136-178)||(2738940-2738982)
chr7 (136-178)||(4187988-4188030)
chr7 (136-178)||(5639659-5639701)
chr7 (136-178)||(16100159-16100201)
chr7 (136-178)||(24936677-24936719)
chr7 (139-177)||(25250260-25250298)
chr7 (131-177)||(34118340-34118386)
chr7 (301-351)||(41521014-41521064)
chr7 (136-165)||(22281996-22282025)
chr7 (134-167)||(22526242-22526275)
chr7 (136-177)||(23735995-23736036)
chr7 (136-176)||(24166367-24166408)
chr7 (135-176)||(25270601-25270642)
chr7 (139-176)||(26743221-26743258)
chr7 (135-176)||(31857028-31857069)
chr7 (140-177)||(45833190-45833227)
chr7 (136-176)||(24166259-24166299)
chr7 (134-178)||(25250151-25250195)
chr7 (136-176)||(28324716-28324756)
chr7 (133-177)||(31857173-31857217)
chr7 (141-177)||(43093520-43093556)
chr7 (134-178)||(45833292-45833336)
[»] chr4 (40 HSPs)
chr4 (134-177)||(34595785-34595828)
chr4 (136-177)||(18592341-18592382)
chr4 (136-177)||(24156135-24156176)
chr4 (136-176)||(48088099-48088139)
chr4 (134-177)||(8014177-8014220)
chr4 (135-178)||(38224039-38224082)
chr4 (136-178)||(11347516-11347558)
chr4 (135-177)||(34321485-34321527)
chr4 (135-177)||(34709678-34709720)
chr4 (135-177)||(35003105-35003147)
chr4 (133-175)||(48950583-48950625)
chr4 (135-177)||(56420426-56420468)
chr4 (136-177)||(23795682-23795723)
chr4 (136-177)||(34166108-34166149)
chr4 (135-176)||(35967485-35967526)
chr4 (136-177)||(44495686-44495727)
chr4 (134-167)||(53411082-53411115)
chr4 (137-177)||(18327931-18327971)
chr4 (137-177)||(18437428-18437468)
chr4 (136-176)||(48088006-48088046)
chr4 (136-175)||(24529678-24529717)
chr4 (136-178)||(9011847-9011889)
chr4 (136-178)||(31914430-31914472)
chr4 (136-178)||(34709571-34709613)
chr4 (135-177)||(39294168-39294210)
chr4 (135-173)||(46495638-46495676)
chr4 (135-177)||(49632312-49632354)
chr4 (134-176)||(51394092-51394134)
chr4 (143-177)||(52913636-52913670)
chr4 (136-177)||(1945361-1945402)
chr4 (135-176)||(8560534-8560575)
chr4 (132-177)||(11347111-11347156)
chr4 (135-176)||(48472749-48472790)
chr4 (136-177)||(54675372-54675413)
chr4 (136-176)||(4711402-4711442)
chr4 (134-178)||(20787658-20787702)
chr4 (135-175)||(36469976-36470016)
chr4 (136-176)||(40545292-40545332)
chr4 (133-177)||(46996577-46996621)
chr4 (144-176)||(53402995-53403027)
[»] chr1 (40 HSPs)
chr1 (280-351)||(23920786-23920857)
chr1 (130-178)||(40328974-40329022)
chr1 (136-175)||(34037916-34037955)
chr1 (136-177)||(15285345-15285386)
chr1 (136-177)||(27146127-27146168)
chr1 (138-178)||(6792369-6792409)
chr1 (134-178)||(16427010-16427054)
chr1 (136-178)||(4974147-4974189)
chr1 (136-178)||(7230005-7230047)
chr1 (136-178)||(16426904-16426946)
chr1 (135-177)||(24023468-24023510)
chr1 (135-177)||(34061938-34061980)
chr1 (136-178)||(40094324-40094366)
chr1 (135-177)||(40907282-40907324)
chr1 (136-177)||(38847405-38847446)
chr1 (136-177)||(47912568-47912609)
chr1 (135-175)||(6169916-6169956)
chr1 (134-178)||(49752119-49752163)
chr1 (136-175)||(4683042-4683081)
chr1 (135-178)||(40341832-40341875)
chr1 (136-175)||(42140327-42140366)
chr1 (136-178)||(435202-435244)
chr1 (135-177)||(1344471-1344513)
chr1 (135-177)||(4838306-4838348)
chr1 (135-177)||(13911281-13911323)
chr1 (135-177)||(21852432-21852474)
chr1 (136-178)||(21909943-21909985)
chr1 (136-178)||(29673906-29673947)
chr1 (135-177)||(34755000-34755042)
chr1 (136-177)||(9947750-9947791)
chr1 (136-177)||(11994960-11995001)
chr1 (135-176)||(16661709-16661750)
chr1 (136-177)||(37215275-37215316)
chr1 (135-176)||(43147539-43147580)
chr1 (136-176)||(1358168-1358208)
chr1 (141-177)||(12062195-12062231)
chr1 (136-176)||(12568432-12568472)
chr1 (148-176)||(30287927-30287955)
chr1 (134-178)||(37255120-37255164)
chr1 (132-176)||(42761337-42761381)
[»] chr3 (50 HSPs)
chr3 (136-178)||(16894272-16894314)
chr3 (134-176)||(46843685-46843727)
chr3 (136-177)||(54008310-54008351)
chr3 (134-178)||(53753824-53753868)
chr3 (134-177)||(32956412-32956455)
chr3 (139-178)||(46843635-46843674)
chr3 (135-177)||(17940183-17940225)
chr3 (135-177)||(25990644-25990686)
chr3 (135-177)||(25995645-25995687)
chr3 (135-177)||(54985518-54985560)
chr3 (135-176)||(14626732-14626773)
chr3 (136-177)||(17004954-17004995)
chr3 (136-177)||(29726377-29726418)
chr3 (136-177)||(29726469-29726510)
chr3 (136-177)||(29726561-29726602)
chr3 (136-177)||(33639017-33639058)
chr3 (136-177)||(43883966-43884007)
chr3 (136-177)||(46967560-46967601)
chr3 (136-176)||(24350898-24350938)
chr3 (133-177)||(48909137-48909181)
chr3 (138-178)||(55198608-55198648)
chr3 (134-177)||(378791-378834)
chr3 (135-178)||(1676265-1676308)
chr3 (135-170)||(19899926-19899961)
chr3 (135-178)||(29076627-29076670)
chr3 (136-175)||(39530500-39530539)
chr3 (136-175)||(40326434-40326473)
chr3 (135-178)||(48895618-48895661)
chr3 (134-177)||(51256561-51256604)
chr3 (138-177)||(54008436-54008475)
chr3 (134-176)||(378709-378751)
chr3 (135-177)||(24226309-24226351)
chr3 (132-178)||(25245250-25245296)
chr3 (142-176)||(25823704-25823738)
chr3 (135-177)||(29726285-29726327)
chr3 (135-177)||(38082617-38082659)
chr3 (139-177)||(38446841-38446879)
chr3 (135-177)||(42790878-42790920)
chr3 (143-177)||(51486429-51486463)
chr3 (135-173)||(55198706-55198744)
chr3 (135-176)||(20547788-20547829)
chr3 (135-176)||(35455558-35455599)
chr3 (136-177)||(42595724-42595765)
chr3 (136-177)||(48895496-48895537)
chr3 (132-177)||(54690541-54690586)
chr3 (134-178)||(24312558-24312602)
chr3 (136-176)||(25823596-25823636)
chr3 (135-175)||(44544258-44544298)
chr3 (136-176)||(44687896-44687936)
chr3 (136-176)||(54690434-54690474)
[»] chr6 (26 HSPs)
chr6 (135-176)||(32364011-32364052)
chr6 (136-178)||(26575653-26575695)
chr6 (132-177)||(32364119-32364164)
chr6 (133-177)||(25363836-25363880)
chr6 (139-178)||(7109015-7109054)
chr6 (135-177)||(667723-667765)
chr6 (135-177)||(7498426-7498468)
chr6 (136-178)||(29938346-29938388)
chr6 (136-177)||(3418859-3418900)
chr6 (136-177)||(4156442-4156483)
chr6 (136-177)||(13902019-13902060)
chr6 (136-177)||(13902125-13902166)
chr6 (133-178)||(21478546-21478591)
chr6 (133-177)||(2343334-2343378)
chr6 (136-178)||(22341958-22342000)
chr6 (135-177)||(25363732-25363774)
chr6 (132-174)||(28542397-28542439)
chr6 (136-177)||(3343773-3343814)
chr6 (136-177)||(15090996-15091037)
chr6 (136-169)||(21478664-21478697)
chr6 (136-177)||(26597161-26597202)
chr6 (133-177)||(383600-383644)
chr6 (136-176)||(5433435-5433475)
chr6 (134-178)||(17181393-17181437)
chr6 (136-176)||(31759428-31759468)
chr6 (133-177)||(32710065-32710109)
[»] chr5 (48 HSPs)
chr5 (133-177)||(8694586-8694630)
chr5 (133-176)||(4151144-4151187)
chr5 (133-176)||(36337838-36337881)
chr5 (135-178)||(40428453-40428496)
chr5 (134-177)||(43585489-43585532)
chr5 (135-177)||(3780975-3781017)
chr5 (136-178)||(8959781-8959823)
chr5 (136-178)||(21344551-21344593)
chr5 (135-176)||(5787474-5787515)
chr5 (136-177)||(9087609-9087650)
chr5 (136-177)||(11380289-11380330)
chr5 (136-177)||(13359157-13359198)
chr5 (136-177)||(13461653-13461694)
chr5 (136-177)||(22473934-22473975)
chr5 (136-177)||(23592088-23592129)
chr5 (136-177)||(34186458-34186499)
chr5 (133-177)||(13420537-13420581)
chr5 (137-177)||(13461547-13461587)
chr5 (141-177)||(15966746-15966782)
chr5 (135-178)||(8694478-8694521)
chr5 (134-177)||(14550135-14550178)
chr5 (134-177)||(18753605-18753648)
chr5 (135-178)||(31210362-31210405)
chr5 (135-178)||(34102177-34102220)
chr5 (136-175)||(38860905-38860944)
chr5 (136-178)||(5089555-5089597)
chr5 (135-177)||(6638225-6638267)
chr5 (135-177)||(9012950-9012992)
chr5 (136-178)||(20361973-20362015)
chr5 (134-176)||(20502632-20502674)
chr5 (136-178)||(21369375-21369417)
chr5 (135-177)||(23042065-23042107)
chr5 (135-177)||(23117485-23117527)
chr5 (135-177)||(32146822-32146864)
chr5 (135-177)||(37039795-37039837)
chr5 (135-177)||(43176354-43176396)
chr5 (135-177)||(43585598-43585640)
chr5 (136-177)||(25600655-25600696)
chr5 (149-178)||(25837561-25837590)
chr5 (135-176)||(28907262-28907303)
chr5 (135-176)||(28943657-28943698)
chr5 (136-177)||(31758971-31759012)
chr5 (136-177)||(34102071-34102112)
chr5 (136-177)||(35068022-35068063)
chr5 (134-178)||(5226013-5226057)
chr5 (136-176)||(35469500-35469540)
chr5 (136-176)||(36474906-36474946)
chr5 (136-176)||(38507960-38508000)
[»] chr2 (37 HSPs)
chr2 (134-178)||(29573808-29573852)
chr2 (133-178)||(6006675-6006720)
chr2 (131-178)||(42230513-42230560)
chr2 (135-177)||(4101943-4101985)
chr2 (135-177)||(8079447-8079489)
chr2 (135-177)||(33363662-33363704)
chr2 (136-178)||(37354876-37354918)
chr2 (133-178)||(12017752-12017797)
chr2 (136-177)||(35567144-35567185)
chr2 (135-176)||(35797873-35797914)
chr2 (136-177)||(40846567-40846608)
chr2 (135-176)||(42230626-42230667)
chr2 (135-176)||(42755117-42755158)
chr2 (136-177)||(44949338-44949379)
chr2 (135-175)||(14152185-14152225)
chr2 (136-176)||(33425401-33425441)
chr2 (136-175)||(6006787-6006826)
chr2 (136-175)||(18967329-18967368)
chr2 (139-178)||(40668979-40669018)
chr2 (135-178)||(40669065-40669108)
chr2 (142-177)||(42270086-42270121)
chr2 (139-177)||(5094839-5094877)
chr2 (138-176)||(5717976-5718014)
chr2 (136-178)||(12017854-12017896)
chr2 (135-177)||(26759119-26759161)
chr2 (135-177)||(30202587-30202629)
chr2 (135-177)||(33363554-33363596)
chr2 (136-178)||(35567240-35567282)
chr2 (134-176)||(38721487-38721528)
chr2 (135-177)||(45123790-45123832)
chr2 (135-176)||(4184720-4184761)
chr2 (136-177)||(20556689-20556730)
chr2 (136-177)||(21208995-21209036)
chr2 (136-177)||(33052138-33052179)
chr2 (133-177)||(6048065-6048109)
chr2 (136-176)||(19267936-19267976)
chr2 (136-176)||(38962437-38962477)
[»] scaffold0009 (2 HSPs)
scaffold0009 (135-178)||(8274-8317)
scaffold0009 (135-178)||(49658-49701)
[»] scaffold0136 (2 HSPs)
scaffold0136 (136-173)||(22440-22477)
scaffold0136 (136-177)||(22547-22588)
[»] scaffold0121 (1 HSPs)
scaffold0121 (136-177)||(17537-17578)
[»] scaffold0280 (1 HSPs)
scaffold0280 (135-175)||(13532-13572)
[»] scaffold0047 (1 HSPs)
scaffold0047 (135-178)||(65915-65958)
[»] scaffold0168 (1 HSPs)
scaffold0168 (135-175)||(25008-25048)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 189 - 351
Target Start/End: Original strand, 30587220 - 30587382
Alignment:
Q  189 gtattaatcagtcagtctcaaattcttgaaaacagacgtgcttgattactccaaataccataaaaaacccttccaacttgacactaaaatttttaaaaga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  30587220 gtattaatcagtcagtctcaaattcttgaaaacagacgtgcttgattactccaaataccataaaaaacccttccaacttgatactaaaaattttaaaaga 30587319  T
Q  289 agcaagcattcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30587320 agcaagcattcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 30587382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 1838389 - 1838461
Alignment:
Q  279 ttttaaaagaagcaagcattcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  1838389 ttttaaaagaagtaagcattcttagaagatgacaaatggcaaacttgccaaaatactaagtttgctttattat 1838461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 36826960 - 36827003
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  36826960 tatactccctccgtttttaaatataaacaaaattgattttttag 36827003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 26492453 - 26492412
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  26492453 tactccctccgtttttaaatataaacaaaatttactttttag 26492412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 44838768 - 44838812
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||    
T  44838768 tatactccatccgtttttaaatataagcaaaattgactttttaga 44838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 30587183 - 30587218
Alignment:
Q  84 aatgaaatgaaacaattgaccaacttgaaagaatgt 119  Q
    ||||||||||||||||||||||||||||||||||||    
T  30587183 aatgaaatgaaacaattgaccaacttgaaagaatgt 30587218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 35063457 - 35063496
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  35063457 tactccctccgtttttaaatataagcaaaattgacttttt 35063496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 41178106 - 41178060
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||| |||||||| |||||||||||||| |||||||||||||    
T  41178106 attatactctctccgtttctaaatataaacaaatttgactttttaga 41178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 9203530 - 9203489
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  9203530 tatactccctccgtttttaaatataagcaaaactgacttttt 9203489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 9331285 - 9331326
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  9331285 tactccctccgttttgaaatataaacaaaattgattttttag 9331326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 35202020 - 35201979
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  35202020 tactccctccgtttttaaatataagcaaaattgaatttttag 35201979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 30587099 - 30587139
Alignment:
Q  5 taaatcaccagctatgagttcaaaaatgttttaaagttatt 45  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  30587099 taaataactagctatgagttcaaaaatgttttaaagttatt 30587139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 8568966 - 8568923
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| |  ||||||||||||||||||||||||||    
T  8568966 tatactccctccgtatcaaaatataaacaaaattgactttttag 8568923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 43844719 - 43844762
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  43844719 atactccctccgtttttaaatataagcaaaattggttttttaga 43844762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 473498 - 473552
Alignment:
Q  297 ttcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    |||||| ||||||||||||  |||||||||||||| ||| | |||||||||||||    
T  473498 ttcttaaaagatgacaaatgacaaacttgccaaaacactaaacttgctttattat 473552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 16382421 - 16382463
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  16382421 atactccctccgtttttaaatataaataaaattaattttttag 16382463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 43484077 - 43484035
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||| || |||||||||    
T  43484077 atactccctccgtttttaaatataagcaaattttactttttag 43484035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 44872410 - 44872368
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||| |||||||  |||||||    
T  44872410 atactccctccgtttttaaatataaataaaattggttttttag 44872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 2827351 - 2827392
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||| ||||||||||||||||||  |||||||||||||||    
T  2827351 atactctctccgtttttaaatataagtaaaattgacttttta 2827392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 3270568 - 3270609
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||| |||||||||||||||  ||||||||||||||||    
T  3270568 tactcccttcgtttttaaatataagtaaaattgactttttag 3270609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 3270758 - 3270717
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||| ||| ||||||| |||||||||||||||||    
T  3270758 tactccctccgtcttttaatataagcaaaattgactttttag 3270717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 5038980 - 5039021
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||| ||||||||||||| || ||||||||    
T  5038980 atactccctccgttttaaaatataaacaaattttacttttta 5039021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 7256884 - 7256925
Alignment:
Q  137 actccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||| ||||||||||||| || ||||||||||    
T  7256884 actccctccgttttgaaatataaacaaattttactttttaga 7256925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 24726031 - 24726072
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||| || |||||||||    
T  24726031 tactccctccgtttttaaatataagcaaattttactttttag 24726072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 36593605 - 36593564
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||| ||||||| ||||||||| |||||||||||||||    
T  36593605 tatactccttccgtttctaaatataagcaaaattgacttttt 36593564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 44082087 - 44082046
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||| ||||||||||||||||||| |||||||| ||||||||    
T  44082087 tactacctccgtttttaaatataagcaaaattggctttttag 44082046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 40443669 - 40443613
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttagaaacggagagagta 191  Q
    ||||| ||||||| |  |||||||| ||||||||||||||||| ||||||| |||||    
T  40443669 atacttcctccgtatcaaaatataagcaaaattgactttttaggaacggagggagta 40443613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 40962056 - 40962084
Alignment:
Q  136 tactccctccgtttttaaatataaacaaa 164  Q
    |||||||||||||||||||||||||||||    
T  40962056 tactccctccgtttttaaatataaacaaa 40962084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 41569645 - 41569605
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||| ||||||| ||||||||||| ||||||||||||||||    
T  41569645 tacttcctccgtctttaaatataagcaaaattgacttttta 41569605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 7964486 - 7964557
Alignment:
Q  280 tttaaaagaagcaagcattcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    ||||||||||| ||||||||| |||||||||||||| ||| |||||||| |||||| |||||||||||||||    
T  7964486 tttaaaagaagtaagcattctaagaagatgacaaatgtcatacttgccataatactaagcttgctttattat 7964557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 21907328 - 21907286
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  21907328 atactccctccgtctttaaatataaacaaaattgactttttag 21907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 26153910 - 26153952
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  26153910 atactccctccgttttttaatataaacaaaattgactttttag 26153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 35160894 - 35160852
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  35160894 atactccctccgtttttaaatataagcaaaattgactttttag 35160852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 39098291 - 39098332
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  39098291 tactccctccgtttctaaatataaacaaaattgactttttag 39098332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 40235173 - 40235134
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  40235173 tactccctccgtttttaaatataaacaaaattgaattttt 40235134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 11909258 - 11909300
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  11909258 tatactccctccgttttttaatataagcaaaattgacttttta 11909300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 25099532 - 25099574
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  25099532 tactccctccgtctttaaatataagcaaaattgactttttaga 25099574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 25099681 - 25099639
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  25099681 atactccctccgtttttaaatataagcaaaattaactttttag 25099639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 26154060 - 26154018
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  26154060 atactccctccgtctttaaatataagcaaaattgactttttag 26154018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 5082671 - 5082712
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  5082671 atactccctccgtctttaaatataagcaaaattgacttttta 5082712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 6580501 - 6580542
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  6580501 tactccctccgtttttaaatataagcaaaattgacattttag 6580542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 22332292 - 22332333
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  22332292 atactccctccgtttctaaatataaacaaaattgtcttttta 22332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 22816515 - 22816548
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattga 169  Q
    ||||||||||||||||||||||||||||||||||    
T  22816515 tactccctccgtttttaaatataaacaaaattga 22816548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 30005870 - 30005911
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  30005870 tatactccctccgtttttaaatataagtaaaattgacttttt 30005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 34118493 - 34118452
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  34118493 tactccctccgttttttaatataaacaaaattaactttttag 34118452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 35160741 - 35160786
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||    
T  35160741 attatactccatccgtttctaaatataagcaaaattgactttttag 35160786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 16100307 - 16100267
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  16100307 tactccccccgtttttaaatataagcaaaattgacttttta 16100267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 39976190 - 39976146
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||    
T  39976190 tatactccctccgtttttaaacataagcaaaattgattttttaga 39976146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 48590578 - 48590622
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||||||||| || |||||||||    
T  48590578 ttatactccctccgtttctaaatataaacaaattttactttttag 48590622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 4027364 - 4027321
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||    
T  4027364 tatactccatccgtttttaaatataagcaaaattgaatttttag 4027321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 13561123 - 13561166
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||    
T  13561123 tatactcccaccgtttttaaatataagcaaaatttactttttag 13561166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 14206476 - 14206433
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||    
T  14206476 tatactccctccgtttctaaatataagcaaatttgactttttag 14206433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 14215166 - 14215123
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||    
T  14215166 tatactccctccgtttctaaatataagcaaatttgactttttag 14215123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 36399889 - 36399932
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||    
T  36399889 tatactccttccgtctttaaatataagcaaaattgactttttag 36399932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 39024058 - 39024101
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||    
T  39024058 atactccctccatttttaaatataagcaaaattgaccttttaga 39024101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 2738982 - 2738940
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||    
T  2738982 tacttcctccgttttttaatataaacaaaattgattttttaga 2738940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 4187988 - 4188030
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||  |||||| ||||||||||    
T  4187988 tactccctccgtttttaaatataagtaaaattcactttttaga 4188030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 5639701 - 5639659
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||    
T  5639701 tactccatccgtctttaaatataagcaaaattgactttttaga 5639659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 16100159 - 16100201
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||    
T  16100159 tactcccttcgtttttaaatataagcaaaattgagtttttaga 16100201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 24936677 - 24936719
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||    
T  24936677 tactctctccgtttttaaatataagcaaaattgattttttaga 24936719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 25250298 - 25250260
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  25250298 tccctccgtttttaaatataagtaaaattgactttttag 25250260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 34118340 - 34118386
Alignment:
Q  131 cattatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||||    
T  34118340 cattgtactccctccgtatttaaaaataagcaaaattgactttttag 34118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 41521064 - 41521014
Alignment:
Q  301 tagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    |||||||||||||||  |||||||||||||||||| | ||| |||||||||    
T  41521064 tagaagatgacaaatggcaaacttgccaaaatactaaacttcctttattat 41521014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 22281996 - 22282025
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaa 165  Q
    ||||||||||||||||||||||||||||||    
T  22281996 tactccctccgtttttaaatataaacaaaa 22282025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 22526242 - 22526275
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaatt 167  Q
    |||||||||||||||| |||||||||||||||||    
T  22526242 tatactccctccgtttctaaatataaacaaaatt 22526275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 23735995 - 23736036
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||||||||||||| ||||||| |||||||||    
T  23735995 tactccatccgtttttaaatataagcaaaatttactttttag 23736036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 24166408 - 24166367
Alignment:
Q  136 tactccctccgt-ttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  24166408 tactccctccgtattttaaatataaacaaaattgatttttta 24166367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 25270642 - 25270601
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||||||||| |||| || ||||||||    
T  25270642 atactccctccgtttttaaatataagcaaattttacttttta 25270601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 26743258 - 26743221
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||||||  |||||||||||||||    
T  26743258 tccctccgtttttaaatataagtaaaattgacttttta 26743221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 31857028 - 31857069
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||    
T  31857028 atactccctccgtctttaaatataatcaaaattgatttttta 31857069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 45833190 - 45833227
Alignment:
Q  140 ccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| || |||||||||    
T  45833190 ccctccgtttttaaatataaacaaattttactttttag 45833227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 24166259 - 24166299
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||| ||| ||||||||| ||||||||||||||||    
T  24166259 tactccctccatttctaaatataagcaaaattgacttttta 24166299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 25250151 - 25250195
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||| | ||| ||||||| ||||||||||||||||||    
T  25250151 tatactccctccatcttttaatataagcaaaattgactttttaga 25250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 28324716 - 28324756
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||| ||||||||| ||||||||| ||||||    
T  28324716 tactccctccgtttctaaatataagcaaaattgaattttta 28324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 31857217 - 31857173
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| || |||| ||||||||| |||||||||||||||||    
T  31857217 ttatactccatcagtttataaatataagcaaaattgactttttag 31857173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 43093556 - 43093520
Alignment:
Q  141 cctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  43093556 cctccgtttttaaatataagcaaaatttactttttag 43093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 45833336 - 45833292
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| ||||||||||||||||||| |||| || ||||||||||    
T  45833336 tatacttcctccgtttttaaatataagcaaattttactttttaga 45833292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 34595828 - 34595785
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34595828 tatactccctccgtttttaaatataaacaaaattgactttttag 34595785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 18592341 - 18592382
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18592341 tactccctccgtttttaaatataagcaaaattgactttttag 18592382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 24156135 - 24156176
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24156135 tactccctccgtttttaaatataagcaaaattgactttttag 24156176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 48088139 - 48088099
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  48088139 tactccctccgtttttaaatataagcaaaattgacttttta 48088099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 8014177 - 8014220
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  8014177 tatactccctccgtatttaaatataagcaaaattgactttttag 8014220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 38224082 - 38224039
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  38224082 atactctctccgtttttaaatataagcaaaattgactttttaga 38224039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 11347558 - 11347516
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  11347558 tactcccttcgtttttaaatataaacaaaattgactttctaga 11347516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 34321527 - 34321485
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  34321527 atactccttccgtttctaaatataaacaaaattgactttttag 34321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 34709720 - 34709678
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| ||||||| |||||||||||||||||    
T  34709720 atactccctccgttttttaatataagcaaaattgactttttag 34709678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 35003105 - 35003147
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  35003105 atactccctccgtttctaaatataaataaaattgactttttag 35003147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 48950625 - 48950583
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  48950625 ttatactccctccgtttctaaatataaacaaaatttacttttt 48950583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 56420426 - 56420468
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  56420426 atactccctccgtttttaaatataaacaaattttactttttag 56420468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 23795723 - 23795682
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  23795723 tactccctccgtttttaaatataagcaaaattggctttttag 23795682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 34166108 - 34166149
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  34166108 tactccctccgtttctaaatataagcaaaattgactttttag 34166149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 35967526 - 35967485
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  35967526 atactccctccgtttctaaatataagcaaaattgacttttta 35967485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 44495686 - 44495727
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  44495686 tactccctccgtttttaaatataagcaaatttgactttttag 44495727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 53411115 - 53411082
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaatt 167  Q
    ||||||||||||||||||||||||||||||||||    
T  53411115 tatactccctccgtttttaaatataaacaaaatt 53411082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 18327931 - 18327971
Alignment:
Q  137 actccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  18327931 actccctccgttttttaatataaataaaattgactttttag 18327971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 18437468 - 18437428
Alignment:
Q  137 actccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  18437468 actccctccgttttttaatataaataaaattgactttttag 18437428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 48088006 - 48088046
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  48088006 tacttcctccgtttttaaatataagcaaaattgacttttta 48088046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 24529717 - 24529678
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  24529717 tactccctccgtttttaaatataagtaaaattgacttttt 24529678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 9011889 - 9011847
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  9011889 tactccctccgttttaaaatataagcaaaattcactttttaga 9011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 31914472 - 31914430
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||| |||||||||  |||||||||||||||||    
T  31914472 tactccctccgtttctaaatataagtaaaattgactttttaga 31914430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 34709571 - 34709613
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  34709571 tactccctccgtatttaaatataagcaaaatttactttttaga 34709613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 39294168 - 39294210
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||    
T  39294168 atactccctccctttttaaatataaataaatttgactttttag 39294210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 46495676 - 46495638
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttt 173  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  46495676 atactccctccatttttaaatataagcaaaattgacttt 46495638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 49632312 - 49632354
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||    
T  49632312 atactccatccgtctttaaatataagcaaaattgactttttag 49632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 51394092 - 51394134
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||| |||||||||||||||||||  |||||||||||||||    
T  51394092 tatacttcctccgtttttaaatataagtaaaattgacttttta 51394134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 52913636 - 52913670
Alignment:
Q  143 tccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||||||||    
T  52913636 tccgtttttaaatataaacaaaatttactttttag 52913670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 1945361 - 1945402
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||  |||||||| |||||||||||||||||    
T  1945361 tactccctccgtttcaaaatataagcaaaattgactttttag 1945402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 8560575 - 8560534
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||| |||||||  |||||||||||||||    
T  8560575 atactccctccgttttttaatataactaaaattgacttttta 8560534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 11347111 - 11347156
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||| ||||||||||||||||| ||||||| | |||||||    
T  11347111 attatactccatccgtttttaaatataagcaaaatttattttttag 11347156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 48472749 - 48472790
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||| |||||||||||||||||||  |||||||||||||||    
T  48472749 atacttcctccgtttttaaatataagtaaaattgacttttta 48472790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 54675413 - 54675372
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  54675413 tactccttccgtttctaaatataagcaaaattgactttttag 54675372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 4711402 - 4711442
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||| ||| ||||||||||||||| ||||||    
T  4711402 tactccctccgtttctaattataaacaaaattgatttttta 4711442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 20787702 - 20787658
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||| ||| |||||||  |||||||||||||||||    
T  20787702 tatactccctccgtattttaatataagtaaaattgactttttaga 20787658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 36470016 - 36469976
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||| || ||||||||| |||||||||||||||    
T  36470016 atactccctccgattctaaatataagcaaaattgacttttt 36469976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 40545292 - 40545332
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||| |||||||||||  |||||||||||||||    
T  40545292 tactccctccgtctttaaatataagtaaaattgacttttta 40545332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 46996621 - 46996577
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| |||||| ||||||||||||||| || |||||||||    
T  46996621 ttatactccttccgttcttaaatataaacaaattttactttttag 46996577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 53402995 - 53403027
Alignment:
Q  144 ccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||| ||||||||||||||||    
T  53402995 ccgtttttaaatataagcaaaattgacttttta 53403027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 23920786 - 23920857
Alignment:
Q  280 tttaaaagaagcaagcattcttagaagatgacaaatatcaaacttgccaaaatacttagcttgctttattat 351  Q
    |||| |||||||||||| ||||| ||||||||||||  |||||||||||||||||| || ||||||||||||    
T  23920786 tttagaagaagcaagcactcttaaaagatgacaaatggcaaacttgccaaaatactaagtttgctttattat 23920857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 40329022 - 40328974
Alignment:
Q  130 tcattatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  40329022 tcattatactccctccgtttttaaatataaacaaattttactttttaga 40328974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 34037916 - 34037955
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34037916 tactccctccgtttttaaatataaacaaaattgacttttt 34037955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 15285386 - 15285345
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  15285386 tactcactccgtttttaaatataaacaaaattgactttttag 15285345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 27146168 - 27146127
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27146168 tactccctccgtttttaaatataagcaaaattgactttttag 27146127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 6792369 - 6792409
Alignment:
Q  138 ctccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  6792369 ctccctccgtttttaaatataagcaaaattgactttttaga 6792409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 16427054 - 16427010
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  16427054 tatactccctccgtttttaaatataagcaaaattgattttttaga 16427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 4974189 - 4974147
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  4974189 tactccctccgttttttaatataagcaaaattgactttttaga 4974147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 7230005 - 7230047
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  7230005 tactccctccgtttttaaatataagcaaaattaactttttaga 7230047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 16426904 - 16426946
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  16426904 tactccctccgtttctaaatataagcaaaattgactttttaga 16426946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 24023510 - 24023468
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  24023510 atactccctccgtttttaaatataagcaaaattaactttttag 24023468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 34061938 - 34061980
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  34061938 atactccctccgtttttaaatataaacaaattttactttttag 34061980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 40094324 - 40094366
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  40094324 tactccctccgtgtttaaatataagcaaaattgactttttaga 40094366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 40907324 - 40907282
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  40907324 atactccctccgtatttaaatataatcaaaattgactttttag 40907282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 38847446 - 38847405
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  38847446 tactctctccgtttttaaatataagcaaaattgactttttag 38847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 47912568 - 47912609
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  47912568 tactccctccgtttctaaatataagcaaaattgactttttag 47912609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 6169956 - 6169916
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  6169956 atactccctccgtttttaaatataaataaaattgatttttt 6169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 49752163 - 49752119
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||    
T  49752163 tatactccattcgtttttaaatataaacaaaattaactttttaga 49752119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 4683081 - 4683042
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  4683081 tactccctctgtttttaaatataaataaaattgacttttt 4683042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 40341875 - 40341832
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||||||||| || ||||| ||||    
T  40341875 atactccctccgtttttaaatataaacaaattttactttataga 40341832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 42140327 - 42140366
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  42140327 tactccctccgtttttaaatataagcaaaattgatttttt 42140366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 435202 - 435244
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||  |||||||| ||||||||||||||||||    
T  435202 tactccctccgtttcaaaatataagcaaaattgactttttaga 435244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 1344513 - 1344471
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  1344513 atactccctccgttttaaaatataagcaaaatttactttttag 1344471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 4838306 - 4838348
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||||||||| || |||||||||    
T  4838306 atactccctccgtttctaaatataaacaaattttactttttag 4838348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 13911281 - 13911323
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  13911281 atactccctccgttttaaaatataagtaaaattgactttttag 13911323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 21852432 - 21852474
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| || |||||||||||||| |||||||||||||||||    
T  21852432 atactccatcggtttttaaatataagcaaaattgactttttag 21852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 21909985 - 21909943
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||| |||| || ||||||||||    
T  21909985 tactccctccgtttttaaatataagcaaattttactttttaga 21909943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 29673947 - 29673906
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  29673947 tactccctccgtttttaaatataaa-aaaattgattttttaga 29673906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 34755000 - 34755042
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  34755000 atactccctccgtttcaaaatataaacaaaattcactttttag 34755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 9947750 - 9947791
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||| ||||||||| |||||||    
T  9947750 tactccctccgttttttaatataagcaaaattgattttttag 9947791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 11995001 - 11994960
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||  |||||||||||||||| |||||||||    
T  11995001 tactccctccgtttcaaaatataaacaaaattcactttttag 11994960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 16661750 - 16661709
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  16661750 atactccctccgtttaaaaatataaacaaaattcacttttta 16661709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 37215316 - 37215275
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  37215316 tactccctccgttttttaatacaagcaaaattgactttttag 37215275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 43147580 - 43147539
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||| |||||||| ||||||| ||||||||    
T  43147580 atactccctccgttttaaaatataagcaaaattcacttttta 43147539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 1358168 - 1358208
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||  |||||||||||||||    
T  1358168 tactccctccgttattaaatataagtaaaattgacttttta 1358208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 12062195 - 12062231
Alignment:
Q  141 cctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||  ||||||||||||||||    
T  12062195 cctccgtttttaaatataaggaaaattgactttttag 12062231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 12568432 - 12568472
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||| |||||||| ||||||| ||||||||    
T  12568432 tactccctccgttttaaaatataagcaaaattcacttttta 12568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 30287927 - 30287955
Alignment:
Q  148 ttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||||||||||||||    
T  30287927 ttttaaatataaacaaaattgacttttta 30287955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 37255120 - 37255164
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||| ||||||| |||| || ||||||||||    
T  37255120 tatactccctccgttttttaatataagcaaattttactttttaga 37255164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 42761381 - 42761337
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||| ||||||||  |||||| ||||||||    
T  42761381 attatactccctccgttttaaaatataagtaaaatttacttttta 42761337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 16894314 - 16894272
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16894314 tactccctccgtttttaaatataaacaaaattgactttttaga 16894272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 46843727 - 46843685
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  46843727 tatactccctccgtttttaaatataagcaaaattgacttttta 46843685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 54008351 - 54008310
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  54008351 tactccctccgtttttaaatataagcaaaattgactttttag 54008310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 53753824 - 53753868
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  53753824 tatactccccccatttttaaatataaacaaaattgactttttaga 53753868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 32956412 - 32956455
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  32956412 tatacttcctccgtttttaaatataagcaaaattgactttttag 32956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 46843635 - 46843674
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  46843635 tccctccgtttttaaatataaacaaaatttactttttaga 46843674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 17940183 - 17940225
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  17940183 atactccctccgtttttaaatataagcaaaatttactttttag 17940225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 25990644 - 25990686
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  25990644 atactccctccgtttttaaatatatgcaaaattgactttttag 25990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 25995687 - 25995645
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  25995687 atactccctccgtttttaaatataagcaaatttgactttttag 25995645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 54985518 - 54985560
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  54985518 atactccatccgtttttaaatataaacaaaattgactctttag 54985560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 14626773 - 14626732
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  14626773 atactccctccgtctttaaatataagcaaaattgacttttta 14626732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 17004954 - 17004995
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  17004954 tactccctccgtttttaaatataagcaaaattgattttttag 17004995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 29726418 - 29726377
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  29726418 tactccctccgtctttaaatataagcaaaattgactttttag 29726377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 29726510 - 29726469
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  29726510 tactccctccgtctttaaatataagcaaaattgactttttag 29726469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 29726602 - 29726561
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  29726602 tactccctccgtctttaaatataagcaaaattgactttttag 29726561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 33639058 - 33639017
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  33639058 tactccctccgtttttaaatataagcaaaattcactttttag 33639017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 43884007 - 43883966
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  43884007 tactccctccgtttttaaatataaataaaattaactttttag 43883966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 46967601 - 46967560
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  46967601 tactccctccgtctttaaatataagcaaaattgactttttag 46967560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 24350938 - 24350898
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  24350938 tactccctccgtttttaaatataaggaaaattgacttttta 24350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 48909181 - 48909137
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||    
T  48909181 ttatactccctccgttttaaaatataagcaaaattcactttttag 48909137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 55198608 - 55198648
Alignment:
Q  138 ctccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  55198608 ctccctccgtttttaaatataagtaaaattgactttttaga 55198648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 378834 - 378791
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||    
T  378834 tatactccctccgttttaaaatataagcaaaattcactttttag 378791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 1676265 - 1676308
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| || |||||||||||||||| |||||||||||||||||    
T  1676265 atactctcttcgtttttaaatataaataaaattgactttttaga 1676308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 19899961 - 19899926
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgac 170  Q
    ||||||||||||||||| ||||||||||||||||||    
T  19899961 atactccctccgttttttaatataaacaaaattgac 19899926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 29076670 - 29076627
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  29076670 atactccctccatttctaaatataagcaaaattgactttttaga 29076627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 39530539 - 39530500
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  39530539 tactccctccatttttaaatataagcaaaattgacttttt 39530500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 40326434 - 40326473
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  40326434 tactccctccatttttaaatataaataaaattgacttttt 40326473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 48895661 - 48895618
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||    
T  48895661 atactccctccgttttaaaatataagcaaaattcactttttaga 48895618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 51256561 - 51256604
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| |||||||||||||| || |||||||||    
T  51256561 tatactccctccgtttctaaatataaacaaattttactttttag 51256604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 54008436 - 54008475
Alignment:
Q  138 ctccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  54008436 ctccctccgtgtttaaatataaacaaaattaactttttag 54008475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 378709 - 378751
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||    
T  378709 tatactccctccgttttaaaatataagcaaaattcacttttta 378751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 24226351 - 24226309
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||    
T  24226351 atactccttccgtattttaatataaacaaaattgactttttag 24226309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 25245296 - 25245250
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||    
T  25245296 attatactccatccgtttctaaatataagtaaaattgactttttaga 25245250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 25823738 - 25823704
Alignment:
Q  142 ctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||| ||||||||||||||||    
T  25823738 ctccgtttttaaatataagcaaaattgacttttta 25823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 29726285 - 29726327
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||| | ||||||||||| |||||||||||||||||    
T  29726285 atactccctccatgtttaaatataagcaaaattgactttttag 29726327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 38082659 - 38082617
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  38082659 atactccctccgtttcaaaatataaacaaaattcactttttag 38082617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 38446879 - 38446841
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  38446879 tccctccgtttttaaatataagtaaaattgactttttag 38446841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 42790878 - 42790920
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||    
T  42790878 atactcccttcgtttttaaatataaacaaaaatgaatttttag 42790920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 51486429 - 51486463
Alignment:
Q  143 tccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||||||||||||    
T  51486429 tccgtttttaaatataagcaaaattgactttttag 51486463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 55198744 - 55198706
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttt 173  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  55198744 atactccctccgtttttaaatataagtaaaattgacttt 55198706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 20547788 - 20547829
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||| |||||||| ||||||| ||||||||    
T  20547788 atactccctccgttttaaaatataagcaaaattcacttttta 20547829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 35455558 - 35455599
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||| |||||||| ||||||| ||||||||    
T  35455558 atactccctccgttttaaaatataagcaaaattcacttttta 35455599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 42595724 - 42595765
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| ||||||||||||| || |||||||||    
T  42595724 tactccctccgttttaaaatataaacaaattttactttttag 42595765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 48895496 - 48895537
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||| ||||||| |||||||||    
T  48895496 tactccctccgttttaaaatataagcaaaattcactttttag 48895537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 54690586 - 54690541
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||||||| ||||||||| |||| ||||||||||||    
T  54690586 attatattccctccgtttctaaatataagcaaatttgactttttag 54690541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 24312558 - 24312602
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||| |||||| ||| ||||||||||||||||| ||||||||||    
T  24312558 tatacaccctccctttataaatataaacaaaatttactttttaga 24312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 25823596 - 25823636
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  25823596 tactccttccgtttttaaatataagcaaaattcacttttta 25823636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 44544298 - 44544258
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||| || |||||||||||||| |||||||||||||||    
T  44544298 atactccatctgtttttaaatataagcaaaattgacttttt 44544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 44687896 - 44687936
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  44687896 tactccctccgtttctaaatataagcaaaattcacttttta 44687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 54690434 - 54690474
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  54690434 tactccctccgttcttaaatataagcaaatttgacttttta 54690474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 32364011 - 32364052
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32364011 atactccctccgtttttaaatataaacaaaattgacttttta 32364052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 26575653 - 26575695
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  26575653 tactccctccgtttttaaatataaacaaaattgattttttaga 26575695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 32364164 - 32364119
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||    
T  32364164 attatactccctccgtttttaaatataagcaaaatttactttttag 32364119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 25363880 - 25363836
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  25363880 ttatactccctccgtttttaaatacaagcaaaattgactttttag 25363836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 7109015 - 7109054
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  7109015 tccctccgtttttaaatataaacaaaattaactttttaga 7109054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 667723 - 667765
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  667723 atactccctccgtttttaaatataagcaaaattgattttttag 667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 7498426 - 7498468
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  7498426 atactccctccgtttttaaatataagtaaaattgactttttag 7498468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 29938346 - 29938388
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  29938346 tactcccttcgtttttaaatataagcaaaattgactttttaga 29938388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 3418900 - 3418859
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  3418900 tactcactccgtttttaaatataagcaaaattgactttttag 3418859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 4156483 - 4156442
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  4156483 tactccctccatttttaaatataagcaaaattgactttttag 4156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 13902019 - 13902060
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  13902019 tactccatccgtttttaaatataagcaaaattgactttttag 13902060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 13902166 - 13902125
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  13902166 tactccccccgtctttaaatataaacaaaattgactttttag 13902125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 21478546 - 21478591
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||    
T  21478546 ttatactccctccgtatcaaaatataaacaaaattgactttttaga 21478591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 2343334 - 2343378
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  2343334 ttatactcgctccgtttttaaatataagtaaaattgactttttag 2343378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 22341958 - 22342000
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  22341958 tactccctccgttttaaaatataagcaaaattcactttttaga 22342000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 25363732 - 25363774
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||    
T  25363732 atactccttccgtttttaaatataagcaaaattgattttttag 25363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 28542439 - 28542397
Alignment:
Q  132 attatactccctccgtttttaaatataaacaaaattgactttt 174  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||    
T  28542439 attatacaccctccgtctttaaatataagcaaaattgactttt 28542397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 3343773 - 3343814
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||| ||| |||||||    
T  3343773 tactccctccgtttttaaatataagcaaaaatgattttttag 3343814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 15091037 - 15090996
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| |||||||| |||||||||||||||| |||||||||    
T  15091037 tactccttccgttttaaaatataaacaaaattcactttttag 15090996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 21478697 - 21478664
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattga 169  Q
    ||||||||||||||||||||||||| ||||||||    
T  21478697 tactccctccgtttttaaatataaataaaattga 21478664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 26597161 - 26597202
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||  |||||||||||||||| |||||||||    
T  26597161 tactccctccgtttcaaaatataaacaaaattcactttttag 26597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 383600 - 383644
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||  |||||||| ||||||| |||||||||    
T  383600 ttatactccctccgtttcaaaatataagcaaaattcactttttag 383644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 5433475 - 5433435
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||||| ||||| |||| |||||||||||    
T  5433475 tactccctccgtttttaattataagcaaatttgacttttta 5433435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 17181437 - 17181393
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| | |||||||||||||||||||||| || ||||||||||    
T  17181437 tatacttcatccgtttttaaatataaacaaattttactttttaga 17181393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 31759468 - 31759428
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||| ||||||| ||||||||| ||||||||||||||||    
T  31759468 tactccatccgtttctaaatataagcaaaattgacttttta 31759428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 32710065 - 32710109
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||| ||||||||  |||||| |||||||||    
T  32710065 ttatactccctccgttttaaaatataagtaaaattcactttttag 32710109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 8694630 - 8694586
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  8694630 ttatactccctccgtttctaaatataaacaaaattgactttttag 8694586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 4151144 - 4151187
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  4151144 ttatactccatccgtttttaaatataagcaaaattgacttttta 4151187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 36337881 - 36337838
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  36337881 ttatactccctccgtttttaaatataagcaaaattcacttttta 36337838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 40428453 - 40428496
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  40428453 atactccttccgtttttaaatataagcaaaattgactttttaga 40428496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 43585489 - 43585532
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  43585489 tatactccctccgtttttaaatataaacaaattttactttttag 43585532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 3780975 - 3781017
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  3780975 atactccctccgtctttaaatataagcaaaattgactttttag 3781017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 8959781 - 8959823
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  8959781 tactccatccgtctttaaatataaacaaaattgactttttaga 8959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 21344593 - 21344551
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  21344593 tactccctccgtctttaaatataagcaaaattgactttttaga 21344551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 5787474 - 5787515
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  5787474 atactccctccgtctttaaatataagcaaaattgacttttta 5787515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 9087650 - 9087609
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  9087650 tactccttccgtttttaaatataagcaaaattgactttttag 9087609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 11380330 - 11380289
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  11380330 tactccctcggtttttaaatataagcaaaattgactttttag 11380289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 13359157 - 13359198
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  13359157 tactccctccgttttttaatataagcaaaattgactttttag 13359198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 13461694 - 13461653
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  13461694 tactccctccgttttttaatataagcaaaattgactttttag 13461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 22473934 - 22473975
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  22473934 tactccctccatttttaaatataaataaaattgactttttag 22473975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 23592129 - 23592088
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  23592129 tactccctctgtttttaaatataagcaaaattgactttttag 23592088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 34186499 - 34186458
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  34186499 tactccctccgtttttaaatataagcaaaattgagtttttag 34186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 13420581 - 13420537
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||    
T  13420581 ttatactccctccgtttttaaatataagcaaatttgattttttag 13420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 13461547 - 13461587
Alignment:
Q  137 actccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  13461547 actccctccgtatttaaatataagcaaaattgactttttag 13461587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 15966782 - 15966746
Alignment:
Q  141 cctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||| ||||||||||||||||    
T  15966782 cctccgtttttaaatataaataaaattgactttttag 15966746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 8694478 - 8694521
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||    
T  8694478 atactccatccgtttctaaatataagcaaaattgactttttaga 8694521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 14550178 - 14550135
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||    
T  14550178 tatactccctccgttttaaaatataagcaaaattcactttttag 14550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 18753605 - 18753648
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||    
T  18753605 tatactccctccgtattttaatataagcaaaattgactttttag 18753648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 31210405 - 31210362
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||| |||||||||||||||||||||| || ||||||||||    
T  31210405 atactccatccgtttttaaatataaacaaattttactttttaga 31210362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 34102220 - 34102177
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| ||||||||||||||||| || |||||||    
T  34102220 atactccctccgtttctaaatataaacaaaatttaccttttaga 34102177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 38860944 - 38860905
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  38860944 tactccctccgtttttaaatataagcaaaattgatttttt 38860905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 5089597 - 5089555
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||| |||||||||||||||||||| |||||||| ||||||||    
T  5089597 tacttcctccgtttttaaatataaataaaattgattttttaga 5089555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 6638225 - 6638267
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||| || |||||||||    
T  6638225 atactccctccgtttttaaatataagcaaattttactttttag 6638267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 9012950 - 9012992
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||| ||||||||||||||||||||| || ||||||    
T  9012950 atactccctccatttttaaatataaacaaaatttacattttag 9012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 20361973 - 20362015
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||| |||| || ||||||||||    
T  20361973 tactccctccgtttttaaatataagcaaattttactttttaga 20362015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 20502674 - 20502632
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  20502674 tatactccctccgtattttaatataagcaaaattgacttttta 20502632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 21369417 - 21369375
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||    
T  21369417 tactccctccgttttaaaatataagcaaaatttactttttaga 21369375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 23042107 - 23042065
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| |||||||||||||||||| ||||||| |||||||||    
T  23042107 atactctctccgtttttaaatataagcaaaatttactttttag 23042065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 23117485 - 23117527
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| |||||||||||||||||  ||||||||||||||||    
T  23117485 atactccatccgtttttaaatataagtaaaattgactttttag 23117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 32146822 - 32146864
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| |||||||||||||||||| ||||||| |||||||||    
T  32146822 atactctctccgtttttaaatataagcaaaatttactttttag 32146864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 37039837 - 37039795
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  37039837 atactccctccgtttttaaatataagcaaaattaaatttttag 37039795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 43176396 - 43176354
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||    
T  43176396 atactccctccgtattttaatataagcaaaattgactttttag 43176354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 43585640 - 43585598
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||    
T  43585640 atactccatccgtttttaaatataagcaaaatttactttttag 43585598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 25600696 - 25600655
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||| |||||||| |||||||||||||||| |||||||||    
T  25600696 tactccatccgttttaaaatataaacaaaattcactttttag 25600655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 25837561 - 25837590
Alignment:
Q  149 tttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||||||||    
T  25837561 tttaaatataaacaaaattgactttttaga 25837590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 28907303 - 28907262
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  28907303 atactccctccgtttaaaaatataaacaaaattcacttttta 28907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 28943698 - 28943657
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  28943698 atactccctccgtttaaaaatataaacaaaattcacttttta 28943657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 31759012 - 31758971
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| |||||||||||||| |||||||| ||||||||    
T  31759012 tactccctctgtttttaaatataagcaaaattggctttttag 31758971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 34102071 - 34102112
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||| | |||||||    
T  34102071 tactccctccgtttttaaatataagcaaaatttattttttag 34102112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 35068063 - 35068022
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||| ||||||||||||||||||| || |||||||||    
T  35068063 tactccctctgtttttaaatataaacaaattttactttttag 35068022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 5226013 - 5226057
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||  |||||||| ||||||| ||||||||||    
T  5226013 tatactccctccgtttcaaaatataagcaaaattcactttttaga 5226057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 35469540 - 35469500
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||| |||| |||||||||||||| ||||||||||||||||    
T  35469540 tacttcctcggtttttaaatataagcaaaattgacttttta 35469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 36474946 - 36474906
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||||||| ||||||||||||| |||||||||| |||||    
T  36474946 tactccctccatttttaaatataagcaaaattgacctttta 36474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 38508000 - 38507960
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||| || ||||||||||| ||||||||||||||||    
T  38508000 tactccctctgtctttaaatataagcaaaattgacttttta 38507960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 29573808 - 29573852
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  29573808 tatactccctccgtttttaaatataagcaaaattgactttttaga 29573852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 6006675 - 6006720
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  6006675 ttatactctctccgtttttaaatataaataaaattgactttttaga 6006720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 42230513 - 42230560
Alignment:
Q  131 cattatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  42230513 cattgtactccctccgtctttaaatataagcaaaattgactttttaga 42230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 4101943 - 4101985
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  4101943 atactccctccgtttttaaatataagtaaaattgactttttag 4101985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 8079489 - 8079447
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||| |||||||| |||||||    
T  8079489 atactccctccgtttttaaatataaataaaattgattttttag 8079447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 33363704 - 33363662
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  33363704 atactccctccgtctttaaatataagcaaaattgactttttag 33363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 37354876 - 37354918
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  37354876 tactccatctgtttttaaatataaacaaaattgactttttaga 37354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 12017752 - 12017797
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  12017752 ttatactacctccgtctttaaatataagcaaaattgactttttaga 12017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 35567144 - 35567185
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  35567144 tactccctccgtttttaaatataagcaaaattgattttttag 35567185  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 35797914 - 35797873
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  35797914 atactccctccatttttaaatataaacaaaattaacttttta 35797873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 40846608 - 40846567
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||||||||||| |||||||||    
T  40846608 tactccctccgttttaaaatataaacaaaattcactttttag 40846567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 42230667 - 42230626
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  42230667 atactccctccgttttttaatataagcaaaattgacttttta 42230626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 42755158 - 42755117
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  42755158 atactccctccgtctttaaatataaacaaaattaacttttta 42755117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 44949338 - 44949379
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  44949338 tactccctccgtttctaaatataagcaaaattgactttttag 44949379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 14152185 - 14152225
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  14152185 atactccctccgtttttaaatataagcaaaattgatttttt 14152225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 33425441 - 33425401
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  33425441 tactccatccgtttttaaatataagcaaaattgacttttta 33425401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 6006826 - 6006787
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  6006826 tactccctccgttttttaatataaataaaattgacttttt 6006787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 18967368 - 18967329
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  18967368 tactccctccgtttttaaatataactaaaattgacttttt 18967329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 40668979 - 40669018
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  40668979 tccctctgtttttaaatataagcaaaattgactttttaga 40669018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 40669108 - 40669065
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  40669108 atactccctccgtttctaaatataagcaaaatttactttttaga 40669065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 42270121 - 42270086
Alignment:
Q  142 ctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||||||||||| |||||||||    
T  42270121 ctccgtttttaaatataaacaaaatttactttttag 42270086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 5094839 - 5094877
Alignment:
Q  139 tccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  5094839 tccctccgttttttaatataagcaaaattgactttttag 5094877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 5718014 - 5717976
Alignment:
Q  138 ctccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  5718014 ctccctccgtttttaaatataagtaaaattgacttttta 5717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 12017896 - 12017854
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||    
T  12017896 tactccctacgtttttaaatgtaagcaaaattgactttttaga 12017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 26759161 - 26759119
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||    
T  26759161 atactccctccgtctttaaatttaagcaaaattgactttttag 26759119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 30202629 - 30202587
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||    
T  30202629 atactccctccgtttctaaatataagcaaaactgactttttag 30202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 33363554 - 33363596
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| ||||||  |||||||||    
T  33363554 atactccctccgtttttaaatataagcaaaatctactttttag 33363596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 35567282 - 35567240
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  35567282 tactccctccgtttttaaatataagtaaaattgattttttaga 35567240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 38721528 - 38721487
Alignment:
Q  134 tatactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  38721528 tatactccctccgtttt-aaatataagcaaaattgacttttta 38721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 45123790 - 45123832
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||||||||||||| |||| || |||||||||    
T  45123790 atactccctccgtttttaaatataagcaaattttactttttag 45123832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 4184720 - 4184761
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||    
T  4184720 atactccctccgtattttaatataagcaaaattgacttttta 4184761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 20556730 - 20556689
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||| ||||||||| |||||||    
T  20556730 tactccctccgttttcaaatataagcaaaattgattttttag 20556689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 21209036 - 21208995
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||||||||||||| |||||||| ||||||| |||||||||    
T  21209036 tactccctccgttttaaaatataagcaaaattcactttttag 21208995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 33052138 - 33052179
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||| ||||||| ||||||||| |||||||    
T  33052138 tactccctccgttttttaatataagcaaaattgattttttag 33052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 6048109 - 6048065
Alignment:
Q  133 ttatactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||||||||||  |||||||| ||||||| |||||||||    
T  6048109 ttatactccctccgtttcaaaatataagcaaaattcactttttag 6048065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 19267976 - 19267936
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||| |||| ||||||||| ||||||||||||||||    
T  19267976 tactccctctgtttctaaatataagcaaaattgacttttta 19267936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 38962437 - 38962477
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttttta 176  Q
    ||||||||||||||| |||||||| ||||||| ||||||||    
T  38962437 tactccctccgttttaaaatataagcaaaattcacttttta 38962477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 8274 - 8317
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  8274 atactccttccgtttttaaatataagcaaaattgactttttaga 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 49658 - 49701
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||    
T  49658 atactccctctgtttctaaatataagcaaaattgactttttaga 49701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 22440 - 22477
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgacttt 173  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22440 tactccctccgtttttaaatataagcaaaattgacttt 22477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 22588 - 22547
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  22588 tactccctctatttttaaatataagcaaaattgactttttag 22547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 17578 - 17537
Alignment:
Q  136 tactccctccgtttttaaatataaacaaaattgactttttag 177  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  17578 tactctctccgtttttaaatataagcaaaattgactttttag 17537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 13532 - 13572
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  13532 atactctctccgtttttaaatataagcaaaattgacttttt 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 65915 - 65958
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgactttttaga 178  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||    
T  65915 atactccctccgtatttaaatataagcaaaatttactttttaga 65958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 25048 - 25008
Alignment:
Q  135 atactccctccgtttttaaatataaacaaaattgacttttt 175  Q
    ||||||||||| ||||||||||||| |||||||||| ||||    
T  25048 atactccctccatttttaaatataagcaaaattgacctttt 25008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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