View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2631_low_12 (Length: 333)
Name: NF2631_low_12
Description: NF2631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2631_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 319
Target Start/End: Complemental strand, 37340480 - 37340176
Alignment:
| Q |
15 |
aggaacaactccgacaaggaggaaggaacaagaaccagaaacaacagaaagtgaatgaatgaacaaatgaacgaaccttacgtgatatgtatcacagtgt |
114 |
Q |
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| T |
37340480 |
aggaacaactccgacaaggaggaaggaacaagaaccagaaacaacagaaagtgaatgaatgaacaaatgaacgaaccttacgtgatatgtatcacagtgt |
37340381 |
T |
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| Q |
115 |
cgctgcaaggcgcctactataccgttctacaatatcatactacgttaaatccggtctcattgacactgcaatccaactgttcgacgaaatgtcccaatca |
214 |
Q |
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| T |
37340380 |
cgctgcaaggcgcctactataccgttctacaatatcatactacgttaaatccggtctcatcgacactgcaatccaactgttcgacgaaatgtcccaatca |
37340281 |
T |
|
| Q |
215 |
aattgtcgcttattcagcatcgattacaatcgcttcatcggcgttctcctccgtcactctcacctcaacctcgccgaaaattactaccaccaccatgtca |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37340280 |
aattgtcgcttattcagcatcgattacaatcgcttcatcggcgttctcctccgtcactctcacctcaacctcgccgaaaattactaccaccaccatgtca |
37340181 |
T |
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| Q |
315 |
tcccc |
319 |
Q |
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||||| |
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| T |
37340180 |
tcccc |
37340176 |
T |
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