View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2631_low_14 (Length: 256)
Name: NF2631_low_14
Description: NF2631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2631_low_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 12014556 - 12014315
Alignment:
| Q |
1 |
tacatgaataagtattatgttcatttgtgttgcgcacattccggcatcaatactttatcggtctagctcacttaaatggccaattggctaccgtggcgta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12014556 |
tacatgaataagtattatgttcatttgtgttgcgcacattccg-catcaatactttatcggtctagctcacttaaatggccaattggctaccgtggcgta |
12014458 |
T |
|
| Q |
101 |
caataatgcttttaacttctctttgtgcatgcaagtcatatatcccccatgcacgactcgtaaacatttatttttcaaatatcgactatacgtagtcttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12014457 |
caataatgcttttaacttctctttgtgcatgcaagtcatatatcccccatgcacgactcgtaaacatttatttttcaaatatcaactatacgtagtcttc |
12014358 |
T |
|
| Q |
201 |
caatttccaacttacagtattttagcgatacatttccgtgcct |
243 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
12014357 |
caatttccaacttacagtattctagcgatacatttctgtgcct |
12014315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University