View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2633_low_3 (Length: 330)
Name: NF2633_low_3
Description: NF2633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2633_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 136 - 320
Target Start/End: Complemental strand, 24952633 - 24952449
Alignment:
| Q |
136 |
ataaagcgcataaaactttgcgaagcaaacgatggnnnnnnnnnnnnnctgtatttggctcaaatatggaatcagattcctgtagtgttatataacaagg |
235 |
Q |
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|||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24952633 |
ataaagtgcataaaactttgcgaagtaaacgatggtttttcactttttctgtatttggctcaaatatggaatcagattcctgtagtgttatataacaagg |
24952534 |
T |
|
| Q |
236 |
gtttttgagccgccgacacaacatttattgtatactatgcggcagggaagatttgtatatgtaacaaagtagattcagatctctg |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |
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| T |
24952533 |
gtttttgagccgccgacacaacatttattgtatactatgcggcagggaagatttatatatgtaacaaggtagattcagatctctg |
24952449 |
T |
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