View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2635_low_11 (Length: 253)
Name: NF2635_low_11
Description: NF2635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2635_low_11 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 11436677 - 11436912
Alignment:
| Q |
18 |
actatacacactaaggggatacactaaggtgctcaaggtgacaatccaagtattataaccagaatgattcttattttattacatcaagaaggaaggacca |
117 |
Q |
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| T |
11436677 |
actatacacactaaggggatacactaaggtgctcaaggtgacaatctaagtattataaccagaatgattcttattttattacatcaagaaggaaggacca |
11436776 |
T |
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| Q |
118 |
aaaaataaataaactcattgaaggcatgtcatatannnnnnnnggagaatcggaaatagcggatatagtatatacaatcattcatcaatatcatctttaa |
217 |
Q |
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| T |
11436777 |
aaaaataaataaactcattgaaggcatgtcatattttttttttggagaatcggaaataacggatatagtatatacaatcattcatcaatatcatctttaa |
11436876 |
T |
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| Q |
218 |
caacttcattgattttggaaggttgattctcattta |
253 |
Q |
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| T |
11436877 |
caacttcaatgattttggaaggttgattctcattta |
11436912 |
T |
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