View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2638_low_21 (Length: 213)

Name: NF2638_low_21
Description: NF2638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2638_low_21
NF2638_low_21
[»] chr6 (47 HSPs)
chr6 (35-195)||(26802442-26802602)
chr6 (35-192)||(28781139-28781296)
chr6 (19-192)||(26646463-26646636)
chr6 (19-192)||(26752431-26752604)
chr6 (35-192)||(28786278-28786435)
chr6 (35-192)||(28792399-28792556)
chr6 (31-192)||(27677644-27677805)
chr6 (35-192)||(27678946-27679103)
chr6 (31-192)||(27706432-27706593)
chr6 (19-192)||(26622960-26623133)
chr6 (19-192)||(26728938-26729111)
chr6 (19-192)||(31284272-31284445)
chr6 (35-192)||(27611032-27611189)
chr6 (35-192)||(27718409-27718566)
chr6 (21-164)||(26823826-26823969)
chr6 (23-153)||(26861604-26861734)
chr6 (35-188)||(27593054-27593207)
chr6 (35-192)||(27724875-27725032)
chr6 (35-192)||(27698524-27698681)
chr6 (35-192)||(27604735-27604892)
chr6 (16-156)||(25506975-25507115)
chr6 (41-184)||(26655995-26656138)
chr6 (41-184)||(26761966-26762109)
chr6 (21-181)||(25579705-25579865)
chr6 (19-181)||(26142849-26143011)
chr6 (35-181)||(25481742-25481888)
chr6 (35-184)||(27531235-27531384)
chr6 (21-170)||(28226936-28227085)
chr6 (40-184)||(27338103-27338247)
chr6 (40-184)||(27398843-27398987)
chr6 (74-170)||(28242843-28242939)
chr6 (35-181)||(26055926-26056072)
chr6 (35-181)||(26075896-26076042)
chr6 (50-192)||(26884178-26884322)
chr6 (74-159)||(28139580-28139665)
chr6 (74-159)||(28234603-28234688)
chr6 (74-170)||(28181153-28181249)
chr6 (42-184)||(28149945-28150086)
chr6 (40-181)||(25538545-25538686)
chr6 (74-159)||(28185405-28185490)
chr6 (74-170)||(28325520-28325616)
chr6 (74-181)||(26048884-26048991)
chr6 (74-181)||(26070053-26070160)
chr6 (76-170)||(28297765-28297859)
chr6 (76-170)||(28514214-28514308)
chr6 (61-170)||(26341986-26342095)
chr6 (35-150)||(27229232-27229347)
[»] chr8 (1 HSPs)
chr8 (19-186)||(29273806-29273973)
[»] chr1 (3 HSPs)
chr1 (19-186)||(268380-268547)
chr1 (74-189)||(28127699-28127814)
chr1 (74-189)||(28164382-28164497)
[»] chr4 (5 HSPs)
chr4 (19-186)||(18679590-18679757)
chr4 (19-192)||(18699417-18699590)
chr4 (19-186)||(18731527-18731694)
chr4 (19-192)||(18655494-18655667)
chr4 (19-186)||(18724108-18724275)
[»] scaffold0277 (2 HSPs)
scaffold0277 (35-192)||(13662-13819)
scaffold0277 (35-192)||(4701-4858)
[»] scaffold0419 (1 HSPs)
scaffold0419 (35-192)||(7525-7682)
[»] scaffold0349 (2 HSPs)
scaffold0349 (35-192)||(3451-3609)
scaffold0349 (35-192)||(14386-14542)
[»] scaffold1254 (1 HSPs)
scaffold1254 (35-138)||(1-104)
[»] scaffold0038 (4 HSPs)
scaffold0038 (21-170)||(27434-27583)
scaffold0038 (74-170)||(34764-34860)
scaffold0038 (74-170)||(43005-43101)
scaffold0038 (74-170)||(116835-116931)
[»] chr2 (1 HSPs)
chr2 (42-170)||(3279695-3279823)
[»] scaffold0019 (1 HSPs)
scaffold0019 (74-170)||(58334-58430)


Alignment Details
Target: chr6 (Bit Score: 125; Significance: 1e-64; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 26802442 - 26802602
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26802442 cttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaat 26802541  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtctt 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802542 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtctt 26802602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 28781139 - 28781296
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28781139 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaat 28781238  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28781239 tttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28781296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 26646463 - 26646636
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||| |||| |||   ||||| |||||||||| | ||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  26646463 cattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaac 26646562  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  26646563 tatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgt 26646636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 26752431 - 26752604
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||| |||| |||   ||||| |||||||||| | ||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  26752431 cattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaac 26752530  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| |||||    
T  26752531 tatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgt 26752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 28786278 - 28786435
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  28786278 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaat 28786377  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28786378 tttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28786435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 28792399 - 28792556
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  28792399 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaaat 28792498  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28792499 tttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 28792556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 27677805 - 27677644
Alignment:
Q  31 tgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttca 130  Q
    |||||||| ||||||||||||||||| | |||||||   ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  27677805 tgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttct 27677706  T
Q  131 aaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
      |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27677705 tcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 27677644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 27678946 - 27679103
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | |||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  27678946 cttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 27679045  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27679046 tttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 27679103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 27706593 - 27706432
Alignment:
Q  31 tgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttca 130  Q
    |||||||| |||| |||||||||||| | |||||||   ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  27706593 tgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttct 27706494  T
Q  131 aaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
      |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27706493 tcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 27706432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 26622960 - 26623133
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||  ||||    
T  26622960 cattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaac 26623059  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||| | |||   |||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||||| |||||    
T  26623060 tatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgt 26623133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 26728938 - 26729111
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||  ||||    
T  26728938 cattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaac 26729037  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||| | |||   |||||| ||||| |||||||| ||||| ||||| ||||| || ||||||||||| |||||    
T  26729038 tatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgt 26729111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 31284272 - 31284445
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||  ||||    
T  31284272 cattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaac 31284371  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||||||||||    ||||| |||||||||||||| ||||| ||||| |  ||||||  ||| |||||||||||    
T  31284372 tatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgt 31284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 27611189 - 27611032
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    |    
T  27611189 cttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgt 27611090  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27611089 tttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27611032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 27718566 - 27718409
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    |    
T  27718566 cttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgt 27718467  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27718466 tttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27718409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 26823826 - 26823969
Alignment:
Q  21 ttgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaacta 120  Q
    |||||||||||||||||| |||||||||| ||||| ||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  26823826 ttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaacta 26823925  T
Q  121 tgcctcttcaaaattttgcttggacgaacttgttcacattattc 164  Q
    |||||||||   |||||| |||||||||||||| ||||| ||||    
T  26823926 tgcctcttcttcattttgtttggacgaacttgtccacatcattc 26823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 26861604 - 26861734
Alignment:
Q  23 gatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatg 122  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||    
T  26861604 gatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatg 26861703  T
Q  123 cctcttcaaaattttgcttggacgaacttgt 153  Q
    |||||||   |||||| ||||| ||||||||    
T  26861704 cctcttcgtcattttgtttggatgaacttgt 26861734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 27593207 - 27593054
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| ||||||  ||||||||| | |||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |    
T  27593207 cttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgt 27593108  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcc 188  Q
    |||| |||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  27593107 tttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgcc 27593054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 27725032 - 27724875
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || |||||||||||||||||||||||||||||||||||||||| |||    |    
T  27725032 cttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgt 27724933  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27724932 tttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 27724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 27698681 - 27698524
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || ||||||||||||||||||||||||||| |||||||||| |||||   ||    
T  27698681 cttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcat 27698582  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| |||||  |||||||||||||||||||    
T  27698581 tttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgt 27698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 27604892 - 27604735
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    ||||||||||| |||||||||| | || ||||   ||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||    |    
T  27604892 cttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttcct 27604793  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| ||||| |||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  27604792 tttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgt 27604735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 25507115 - 25506975
Alignment:
Q  16 tcacattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatc 115  Q
    ||||||||||||| |||| ||   |||||| |||||||||| | ||||| ||| ||  ||||||||||| ||||||||||||||||| ||  ||||||||    
T  25507115 tcacattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatc 25507016  T
Q  116 aactatgcctcttcaaaattttgcttggacgaacttgttca 156  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  25507015 aactatgcctcttcaaaattttgtttggaggaacttgttca 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 26655995 - 26656138
Alignment:
Q  41 agaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgct 140  Q
    ||||| |||||||||| | |||||||||  || ||||||||||| || ||||||||||||||  | ||||||  ||||||||| |||||   |||||| |    
T  26655995 agaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtt 26656094  T
Q  141 tggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  26656095 tggacgaacttgtccacatcattcattgctataagacaaagggt 26656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 26761966 - 26762109
Alignment:
Q  41 agaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgct 140  Q
    ||||| |||||||||| | |||||||||  || ||||||||||| || ||||||||||||||  | ||||||  ||||||||| |||||   |||||| |    
T  26761966 agaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtt 26762065  T
Q  141 tggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  26762066 tggacgaacttgtccacatcattcattgctataagacaaagggt 26762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 25579705 - 25579865
Alignment:
Q  21 ttgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaacta 120  Q
    ||||||||  ||| |||| |||||| |||||||||| | ||||||| | ||| ||||||||||| |||||||||||||||||  | ||||||  ||||||    
T  25579705 ttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaacta 25579804  T
Q  121 tgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    ||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  25579805 tgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 25579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 26142849 - 26143011
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||||  ||| |||  |||||| |||||||||| | ||||||| | ||| ||||||||||| |||||||||||||||||  | ||||||  ||||    
T  26142849 cattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaac 26142948  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    ||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  26142949 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag 26143011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 25481742 - 25481888
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||| | ||| ||||||||||| |||||||||| ||||||  | ||||||  ||||||||| |||||   ||    
T  25481742 cttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcat 25481841  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    |||| |||||||||||||| ||||| ||||| ||||| |||||||||    
T  25481842 tttgtttggacgaacttgtccacatcattcactgctacaagacaaag 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 35 - 184
Target Start/End: Complemental strand, 27531384 - 27531235
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | |||||||  | |||||||||||| | ||||||||||||||||| || ||||||   |||||||| |||||   ||    
T  27531384 cttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcat 27531285  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    |||| |||||||||||||||||||| | |||||||||  | |||||||||    
T  27531284 tttgtttggacgaacttgttcacatcactcattgctacgatacaaagggt 27531235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 28226936 - 28227085
Alignment:
Q  21 ttgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaacta 120  Q
    |||||||| | || |||| | |||| |||||||| | |||||||||   ||| | ||||||||| ||||||||||| |||||||| || |||||||| ||    
T  28226936 ttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaatta 28227035  T
Q  121 tgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  28227036 tgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 27338247 - 27338103
Alignment:
Q  40 aagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgc 139  Q
    |||||| ||||||| || | ||||||| | ||| ||||||||||||||||||||||| |||||  | ||||||   |||||||| |||||   |||||||    
T  27338247 aagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgc 27338148  T
Q  140 ttggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    |||||||||||||| ||||| ||||| ||||| ||||||| ||||    
T  27338147 ttggacgaacttgtccacatcattcactgctacaagacaaggggt 27338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 27398987 - 27398843
Alignment:
Q  40 aagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgc 139  Q
    |||||| ||||||| || | ||||||| | ||| ||||||||||||||||||||||| |||||  | ||||||   |||||||| |||||   |||||||    
T  27398987 aagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgc 27398888  T
Q  140 ttggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    |||||||||||||| ||||| ||||| ||||| ||||||| ||||    
T  27398887 ttggacgaacttgtccacatcattcactgctacaagacaaggggt 27398843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 28242843 - 28242939
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28242843 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 26055926 - 26056072
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| ||||||||| | ||| ||||| ||||| ||| |||||||||||||  | ||||||  ||||||||| |||||   ||    
T  26055926 cttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcat 26056025  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    |||| |||||||||||||| ||||| ||||| ||||| || ||||||    
T  26056026 tttgtttggacgaacttgtccacatcattcactgctacaacacaaag 26056072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 26075896 - 26076042
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| ||||||||| | ||| ||||| ||||| ||| |||||||||||||  | ||||||  ||||||||| |||||   ||    
T  26075896 cttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcat 26075995  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    |||| |||||||||||||| ||||| ||||| ||||| || ||||||    
T  26075996 tttgtttggacgaacttgtccacatcattcactgctacaacacaaag 26076042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 26884178 - 26884322
Alignment:
Q  50 gaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaac 149  Q
    ||||||| | ||||||||  ||| ||||||||||| ||||| |||||||||||  | ||||||| ||||||||| |||||   |||||| ||||||||||    
T  26884178 gaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaac 26884277  T
Q  150 ttgttcaca--ttattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| ||||  | ||||| |||||  |||||||||||||||||||    
T  26884278 ttgtccacatgtcattcactgctacgagacaaagggtcgcctcgt 26884322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 28139580 - 28139665
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 159  Q
    ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||    |||||||||||||||||||| |||||    
T  28139580 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacat 28139665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 28234603 - 28234688
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 159  Q
    ||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28234603 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 28181153 - 28181249
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28181153 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 28149945 - 28150086
Alignment:
Q  42 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgctt 141  Q
    ||||||| ||||||| | ||||||||  ||| |||||||||||||| |||||||| |||||  | || |||||||||||| | |||||   |||||| ||    
T  28149945 gaggggacgaaatcacaccatcactct-caaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgttt 28150043  T
Q  142 ggacgaacttgttcacattattcattgctataagacaaagggt 184  Q
    |||||||||||| ||||||||||| ||||  ||| ||||||||    
T  28150044 ggacgaacttgtccacattattcactgcttcaaggcaaagggt 28150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 181
Target Start/End: Original strand, 25538545 - 25538686
Alignment:
Q  40 aagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgc 139  Q
    |||||| |||||||||| | ||||||| | ||| ||||| ||||| ||||| |||||||||||  | ||||||  ||||||||| |||||   ||||||     
T  25538545 aagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgt 25538644  T
Q  140 ttggacgaacttgttcacattattcattgctataagacaaag 181  Q
    |||||||||||||| || || ||||| ||||| |||||||||    
T  25538645 ttggacgaacttgtccagatcattcactgctacaagacaaag 25538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 28185405 - 28185490
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacat 159  Q
    ||||||||||||||||||||||| ||||| || || |||||||| ||||| |||||   ||||||||||||||||||||| |||||    
T  28185405 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacat 28185490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 28325520 - 28325616
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| |||||| | || |||||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  28325520 gccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 26048884 - 26048991
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctata 173  Q
    ||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |    
T  26048884 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26048983  T
Q  174 agacaaag 181  Q
    ||||||||    
T  26048984 agacaaag 26048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 26070053 - 26070160
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctata 173  Q
    ||||| ||||| |||||||||||||||||  | ||||||  ||||||||| |||||   |||||| |||||||||||||| ||||| ||||| ||||| |    
T  26070053 gccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 26070152  T
Q  174 agacaaag 181  Q
    ||||||||    
T  26070153 agacaaag 26070160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 28297859 - 28297765
Alignment:
Q  76 cattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    |||||||||| |||||||||| |||||||| || |||| ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28297859 cattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 28514214 - 28514308
Alignment:
Q  76 cattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    |||||||||| |||||||||| |||||||| || |||| ||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  28514214 cattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 26342095 - 26341986
Alignment:
Q  61 atcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacatt 160  Q
    |||||| | ||| |||||||||||||| |||||||| |||||  | || || ||||||||||| |||||    ||||| |||||||||||||| |||||     
T  26342095 atcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatc 26341996  T
Q  161 attcattgct 170  Q
    ||||||||||    
T  26341995 attcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 27229232 - 27229347
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| || ||||||| | ||||||||| ||| |||||||| || ||| |||||||||||||  | ||||||  ||||||||| |||||   ||    
T  27229232 cttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcat 27229331  T
Q  135 tttgcttggacgaact 150  Q
    |||| ||| |||||||    
T  27229332 tttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 29273973 - 29273806
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29273973 cattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaatttttattcctgtgttttctatcaac 29273874  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 186  Q
    |||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  29273873 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcg 29273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 268547 - 268380
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  268547 cattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 268448  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 186  Q
    |||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |||| |||||||||    
T  268447 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaaaagggtcg 268380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 28127814 - 28127699
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctata 173  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |    
T  28127814 gccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctaca 28127715  T
Q  174 agacaaagggtcgcct 189  Q
    ||||||||||||||||    
T  28127714 agacaaagggtcgcct 28127699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 28164497 - 28164382
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctata 173  Q
    ||||||||| | ||| | ||||||||||||||||| ||||||||||||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| |    
T  28164497 gccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 28164398  T
Q  174 agacaaagggtcgcct 189  Q
    ||||||||||||||||    
T  28164397 agacaaagggtcgcct 28164382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 18679757 - 18679590
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||| ||||| || | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18679757 cattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaac 18679658  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 186  Q
    |||||||||||   |||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  18679657 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcg 18679590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 18699590 - 18699417
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||| ||||| || | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18699590 cattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaac 18699491  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||||||||||   |||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||    
T  18699490 tatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgt 18699417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 18731694 - 18731527
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||| ||||| || | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18731694 cattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaac 18731595  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 186  Q
    |||||||||||   |||||| |||||||||||||| ||||| || || ||||| ||||||||||||||    
T  18731594 tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcg 18731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 18655667 - 18655494
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||| ||||| || | ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18655667 cattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaac 18655568  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||||||||||   |||||| |||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||    
T  18655567 tatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgt 18655494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 18724275 - 18724108
Alignment:
Q  19 cattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaac 118  Q
    ||||||||| ||||| || | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  18724275 cattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaac 18724176  T
Q  119 tatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcg 186  Q
    |||||||||||   |||||| ||| |||||||||| ||||| || || ||||| ||||||||||||||    
T  18724175 tatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcg 18724108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 13819 - 13662
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  13819 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaat 13720  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13719 tttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgt 13662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 4858 - 4701
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | |||| |||  ||| |||||||| || ||||||||||||||||||||||||||||||  |||||||| |||    |    
T  4858 cttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgt 4759  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  4758 tttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 7525 - 7682
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  7525 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaat 7624  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  7625 tttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgt 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 3609 - 3451
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaa-ctatgcctcttcaaaa 133  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||   |    
T  3609 cttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttca 3510  T
Q  134 ttttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    ||||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  3509 ttttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgt 3451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 14542 - 14386
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| |||||||| || |||||||||||||||||||||||||||||||||||||||| |||    |    
T  14542 cttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgt 14444  T
Q  135 tttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgt 192  Q
    |||| |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  14443 tttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgt 14386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 104 - 1
Alignment:
Q  35 cttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaat 134  Q
    |||| |||||| |||||||||| | ||||||||  ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  104 cttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaat 5  T
Q  135 tttg 138  Q
    ||||    
T  4 tttg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 54; Significance: 3e-22; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 27434 - 27583
Alignment:
Q  21 ttgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaacta 120  Q
    |||||||| | || |||| | |||| |||||||| | |||||||||   ||| | ||||||||| ||||||||||| |||||||| || |||||||| ||    
T  27434 ttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaatta 27533  T
Q  121 tgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||| |||||   ||||||||||||||||||||| ||||| ||||||||||    
T  27534 tgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 27583  T

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Target: scaffold0038; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 34764 - 34860
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  34764 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 34860  T

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Target: scaffold0038; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 43005 - 43101
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||   ||||||||||||||||||||| ||||| ||||| ||||    
T  43005 gccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 43101  T

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Target: scaffold0038; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 116835 - 116931
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    ||||||||||||||||||||||| |||||| | || |||||||| ||||| |||||    ||||||||||| |||||||| ||||||||||| ||||    
T  116835 gccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

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Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 3279695 - 3279823
Alignment:
Q  42 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgctt 141  Q
    |||| |||||||||| |  |||||| | ||| ||||| |||||||| | |||||||||||| || || |||||||||||||| ||||| | |||||| ||    
T  3279695 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 3279794  T
Q  142 ggacgaacttgttcacattattcattgct 170  Q
    |||||||||||| ||||| ||||||||||    
T  3279795 ggacgaacttgtccacatcattcattgct 3279823  T

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Target: scaffold0019 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 58430 - 58334
Alignment:
Q  74 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgct 170  Q
    |||||| |||||||||||||||| ||||| || || |||||||||||||| |||||   |||||||||| |||||||||| ||||| ||||| ||||    
T  58430 gccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

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