View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2639_high_8 (Length: 530)
Name: NF2639_high_8
Description: NF2639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2639_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 31 - 515
Target Start/End: Original strand, 104903 - 105387
Alignment:
| Q |
31 |
ctacattatgcatttggaatggaatcacaattttggattttatagagccagtaaattacctttcttccacctttgtttctctctctattgacacacaatt |
130 |
Q |
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| T |
104903 |
ctacattatgcatttggaatggaatcacaattttggattttatagagccagtaaattacctttcttccacctttgtttctctctctattgacacacaatt |
105002 |
T |
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| Q |
131 |
atagcaatgcaatcctacgtgtaaatgccaattattattactcttttcttttccttgtgagatgatgtatttgtcatttggatgaagtgaaactatttat |
230 |
Q |
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| T |
105003 |
atagcaatgcaatcctacgtgtaaatgccaattattattactcttttcttttccttgtgagatgatgtatttgtcatttggatgaagtgaaactatttat |
105102 |
T |
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| Q |
231 |
ctatattaatattgtgacccatgatctgatcttatatgacataatgtgagtaagtcgatcaagaacgtggcaatgtatattcaacaaatacatttaatca |
330 |
Q |
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| T |
105103 |
ctatattaatattgtgacccatgatctgatcttatatgacataatgtgagtaagtcgatcaagaacgtggcaatgtatattcaacaaacacatttaatca |
105202 |
T |
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| Q |
331 |
aactatcatttatttgaatgcaaccttagatggtaggtaatttaaccttctacggtggagtagtctttggctctttgggctgatcaactgagcacatgtc |
430 |
Q |
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| T |
105203 |
aactatcatttatttgaatgcaaccttagatggtaggtaatttaaccttctacggtggagtagtctttggctctttgggctgatcaactgagcacatgtc |
105302 |
T |
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| Q |
431 |
tagtcgactaagaaccaaatacaatgttcatagtaagggtttaactgaatacattcactacaacttagatttcttcaaggggaag |
515 |
Q |
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| T |
105303 |
tagtcgactaagaaccaaatacaatgttcatagtaagggtttaactgaatacattcactacaacttagatttcttcaaggggaag |
105387 |
T |
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