View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2640-Insertion-12 (Length: 612)
Name: NF2640-Insertion-12
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640-Insertion-12 |
 | |
|
| [»] chr4 (11 HSPs) |
| |
|
| [»] scaffold1749 (1 HSPs) |
| | |
|
| [»] scaffold0428 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 570; Significance: 0; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 7 - 612
Target Start/End: Original strand, 31501309 - 31501914
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501309 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
31501408 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501409 |
tagggatgacactaatcttccaaaaggtgaatccatagcatccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
31501508 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
31501509 |
tatgcttcctcaatttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgttgatc |
31501608 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501609 |
ctcccgtggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
31501708 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaaatagctttccttctttgtgagatatatatttttacttttcccttttat |
506 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
31501709 |
agctctgacacaagtcgccggtctatctggttgcgatctacgtgataagtaaatagctttccttctttgtgagatatatattttcacttttcctttttat |
31501808 |
T |
|
| Q |
507 |
actatagttttcgtaaagaagaaaaactttgttattttgtttggtgcacatgctttttatttttgtttctttatatgacgagttgtgttattggtcaact |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31501809 |
actatagttttcgtaaagaagaaaaactttgttattttgtttggtgcacatgctttttatttttgtttctttatatgacgagttgtgttattggtcaact |
31501908 |
T |
|
| Q |
607 |
tcttta |
612 |
Q |
| |
|
|||||| |
|
|
| T |
31501909 |
tcttta |
31501914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 10 - 574
Target Start/End: Original strand, 31496142 - 31496711
Alignment:
| Q |
10 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttag |
109 |
Q |
| |
|
||||||| | ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
31496142 |
attatgacgtgtttgtcacctttagaggtgaggacactcgcaacaatttcactgatcatctttttgataccttccacagagaaggcatttctgcatttag |
31496241 |
T |
|
| Q |
110 |
ggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactat |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| | ||| | ||||||||| |||| | |||||||||||| |
|
|
| T |
31496242 |
agatgacactaatcttccaaaaggtgaatccataggacctaagctcctttgtgcaattgaaaactctcaggtttttgttgtggtcttatcaaggaactat |
31496341 |
T |
|
| Q |
210 |
gcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctc |
309 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
31496342 |
gctttctcaacttcgtgcttgcaagaattagaaaagatccttgaatgggtcaaggtatctaaaaaacatgttctgcctgttttctatgatgttgaccctt |
31496441 |
T |
|
| Q |
310 |
ccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagc |
409 |
Q |
| |
|
| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31496442 |
ctatggtgcgaaagcaaagtggaatttatggtgaagcatttgtcaaacatgaacaaagattccaacaagactctcagatggtgcaaagatggagggaagc |
31496541 |
T |
|
| Q |
410 |
tctgacacaagtcgccggtctctctggttgggatctacatgataagtaaatagctttccttctttgtgagatatatatt----tttacttttccctttta |
505 |
Q |
| |
|
||| | ||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| || || |||||| | ||||| |
|
|
| T |
31496542 |
tctaatacaagtcgctgatctctctggttgggatctacatgataagtaaatagttttccttctatgtgagatatatttttgaattcacttttacttttta |
31496641 |
T |
|
| Q |
506 |
tactatagttttcgtaaagaagaaaaa-ctttgttattttgtttggtgcacatgctttttatttttgttt |
574 |
Q |
| |
|
|| |||||||||||||| ||||||||| || | ||||||||||| |||| |||||||| ||||||||| |
|
|
| T |
31496642 |
tattatagttttcgtaaggaagaaaaacctctattattttgtttcgtgcgagtgctttttgtttttgttt |
31496711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 33 - 548
Target Start/End: Original strand, 31476225 - 31476745
Alignment:
| Q |
33 |
agaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaag |
132 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||||||| || | | |||| || ||||||||||||||||||||||||||| ||||| |
|
|
| T |
31476225 |
agaggtgaagatactcgcaacaatttcactgatttcctttttgatgccctcgaagaaaaaggtgtttttgcatttagggatgacactaatcttcaaaaag |
31476324 |
T |
|
| Q |
133 |
gtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgca |
232 |
Q |
| |
|
|||||||||||||||| || || ||| ||||||||||| ||| | |||| |||| |||| | |||| |||||| |||| |||||||||||||||| | |
|
|
| T |
31476325 |
gtgaatccatagcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgcttgaa |
31476424 |
T |
|
| Q |
233 |
agaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcccatggtgcgaaagcaaagtggg |
332 |
Q |
| |
|
|||||| ||| | ||||| || || || | ||||||||| ||||||| ||||| |||||||||| ||||||| | ||||||||||||||| |||| |
|
|
| T |
31476425 |
agaattggaatacatcctgtgttgtgttcaagcatctaaaaagtatgttctacctgtgttctatgatgttgatccttctttggtgcgaaagcaaactggg |
31476524 |
T |
|
| Q |
333 |
atttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctgacacaagtcgccggtctct |
432 |
Q |
| |
|
|||||| |||||||||||||| |||||| ||| | |||| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
31476525 |
atttatagtgaagcatttgtccaacatggacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctgacacaagtcgccgatctct |
31476624 |
T |
|
| Q |
433 |
ctggttgggatctacatgataagtaaat-agctttccttctttgtgagatatatatt----tttacttttcccttttatactatagttttcgtaaagaag |
527 |
Q |
| |
|
||||||||||||||| |||||||||||| | |||||| ||| ||||| ||||||||| || |||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
31476625 |
ctggttgggatctacgtgataagtaaataatctttcc-tctctgtgaaatatatatttgaattcacttttcctttttatactatagttctcgtaaagaag |
31476723 |
T |
|
| Q |
528 |
aaaaac-tttgttattttgttt |
548 |
Q |
| |
|
|||||| | ||||||||||||| |
|
|
| T |
31476724 |
aaaaacatatgttattttgttt |
31476745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 31030649 - 31030198
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||||| |||||| ||| |||| | |||||||||||| |||| ||||| ||| |||||||| |||||| |
|
|
| T |
31030649 |
attattatgatgtgtttgtcacctttagaggcgaagatactcgcttcaacttcattgatcatctttttgctgcccttcaa-agaaaaggcatttttgcat |
31030551 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
|||| || ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | || |
|
|
| T |
31030550 |
ttagagacgacactaatcttcaaaaaggtgaatccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaa |
31030451 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| | | | |||||||| ||| || || ||| || || |||||| |||||||| ||||||| |||| |
|
|
| T |
31030450 |
ctatgcttcctcaacttggtgcttgcgagaattggtacacatccttgactgcagtcaagtttctggaagacgtgttcttcctgttttttatgatgttgat |
31030351 |
T |
|
| Q |
306 |
cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggg |
405 |
Q |
| |
|
||| | |||| || | |||| || ||||| ||||||| ||| |||||||||||||| ||||||||| || ||||| |||| | ||| ||||||| |
|
|
| T |
31030350 |
ccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaacatgaacaaacattccaacatgaatctcatgtggtacaaagttggaggg |
31030251 |
T |
|
| Q |
406 |
aagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||||||||||||| | | ||||||| |||||||| | |||||||||| |
|
|
| T |
31030250 |
aagctctgacacaagtggggaatatctctggctgggatcttcgtgataagtaa |
31030198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 31020768 - 31020317
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||||| ||||||||| |||||||| ||||| |||||| ||| |||| | |||||||||||| |||| ||||| ||| |||||||| |||||| |
|
|
| T |
31020768 |
attattatgatgtgtttgtcacctttagaggcgaagatactcgcttcaacttcattgatcatctttttgctgcccttcaa-agaaaaggcatttttgcat |
31020670 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
|||| || ||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | || |
|
|
| T |
31020669 |
ttagagacgacgctaatcttcaaaaaggtgaatccataccacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaa |
31020570 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | | | |||||||| ||| || || ||| || || |||||| |||||||| ||||||| |||| |
|
|
| T |
31020569 |
ctattcttcctcaacttggtgcttgcgagaattggtacacatccttgactgcagtcaagtttctggaagacgtgttcttcctgttttttatgatgttgat |
31020470 |
T |
|
| Q |
306 |
cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggg |
405 |
Q |
| |
|
||| | |||| || | |||| || ||||| ||||||| ||| |||||||||||||| ||||||||| |||||||| |||| | ||| ||||||| |
|
|
| T |
31020469 |
ccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaacatgaacaaacattccaacatgactctcatgtggtacaaagttggaggg |
31020370 |
T |
|
| Q |
406 |
aagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||||||||||||| | | ||||||| |||||||| | |||||||||| |
|
|
| T |
31020369 |
aagctctgacacaagtggggaatatctctggctgggatcttcgtgataagtaa |
31020317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 7 - 421
Target Start/End: Original strand, 31488784 - 31489198
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatg-ccttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||| | ||||||||| || ||||||||||| |||||| ||| || ||| |||||||||||| || ||||||| ||| |||||||| |||| | |
|
|
| T |
31488784 |
attattatgacgtgtttgtcaccttcagaggtgaagatactcgcttcaactttactgatcatctttttgctgcccttcaa-agaaaaggcatttttgcgt |
31488882 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
|||| ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||| | |||| ||||||||||||| | || |
|
|
| T |
31488883 |
ttagagatgacactaagcttcaaaaaggtgaatcgatagcacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaa |
31488982 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| | |||||| | | | || || | | || || |||||| |||||||| ||||||| |||| |
|
|
| T |
31488983 |
ctatgcttcctcaacttggtgcttgcgagaattggaatacatccttcactacagtcaagtttttggaagacgtgttcttcctgttttttatgatgttgat |
31489082 |
T |
|
| Q |
306 |
cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggg |
405 |
Q |
| |
|
||| | |||| || | |||| || ||||| ||||||| ||| |||||||||||||| ||||||||| |||||||| |||| | ||||||||||| |
|
|
| T |
31489083 |
ccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaacatgaacaaacattccaacatgactctcatgtggtacaaagatggaggg |
31489182 |
T |
|
| Q |
406 |
aagctctgacacaagt |
421 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
31489183 |
aagctctgacacaagt |
31489198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 92 - 458
Target Start/End: Complemental strand, 31529344 - 31528978
Alignment:
| Q |
92 |
aggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcg |
191 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||| ||||||||||| |||||||| || || |||||||| || |||| ||| | ||| ||| |
|
|
| T |
31529344 |
aggcattgttgcatttagagatgacactaagcttaagaaaggtgaatctatagcacctgaactccttcgtgctatcgaagcctctcggactttcattgtt |
31529245 |
T |
|
| Q |
192 |
gtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttt |
291 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||| ||||| || | |||||| | ||||| || | ||| ||||| |||||| ||||||| |
|
|
| T |
31529244 |
gtcttctcaaacaactatgcttcctcaacttggtgcttgcgggaattgcaatacatccttcattgcgtacaactttctggaaaacgtgttctccctgttt |
31529145 |
T |
|
| Q |
292 |
tctatgatgatgatcctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggt |
391 |
Q |
| |
|
||||||||| ||||||| || |||||||||||||||||||| |||| ||||||||| | ||||||| ||| |||| |||||||| || || | | |
|
|
| T |
31529144 |
tctatgatgttgatccttccgaggtgcgaaagcaaagtgggagttataaaaaagcatttgcccaacatgaggaaagattcaaacaagacactgaggtcct |
31529045 |
T |
|
| Q |
392 |
gctaagatggagggaagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| | |||||||| |||||| || ||||||||| ||| || ||||||||| ||| |||||||||| |
|
|
| T |
31529044 |
gcaaggatggaggacagctctcacgcaagtcgccaatctttcaggttgggatatacgtgataagtaa |
31528978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 31151271 - 31150821
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
|||||||||| | |||||||| ||||||||| |||| || ||| ||| |||||| |||||||||||| |||| | | ||| || |||| || |||| |
|
|
| T |
31151271 |
attattatgacgtgtttgtcagctttagaggtaaagatacacgcctcaacttcactgatcatctttttgctgccctgcaaagaaaat-cattttttcatt |
31151173 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||| || || ||||| ||||||||||| ||| | |||||||||| ||| |||| | |||| |
|
|
| T |
31151172 |
cagggatgatactaagctgaagaaaggtgaatccatagcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaac |
31151073 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
|||||||||||| |||||| |||| |||||| || || ||| || || | || ||||| ||||| |||||||||||| |||||||||| ||||| |
|
|
| T |
31151072 |
tatgcttcctcagtttggtgtttgcgagaattggagtgcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatc |
31150973 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
| | ||||||| | |||| || |||| |||||| || | ||||||||| ||| |||||||||| ||| | | || |||| |||||||||||| |
|
|
| T |
31150972 |
catcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggaggga |
31150873 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
||| ||||||||||| ||| ||||||||| |||||| ||| | |||||||| |
|
|
| T |
31150872 |
agcactgacacaagtggccaatctctctggatgggatgtacgttataagtaa |
31150821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 203 - 425
Target Start/End: Complemental strand, 31162353 - 31162129
Alignment:
| Q |
203 |
gaactatgcttcctcaact--tggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatg |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||| | ||| | | || || ||| ||||||||||||||||||||||||| |
|
|
| T |
31162353 |
gaactatgcttcctcaactattggtgcttgcaagaattagaatccatccttcactgcattaaagtctccgaaaggcatgttctgcctgttttctatgatg |
31162254 |
T |
|
| Q |
301 |
atgatcctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatg |
400 |
Q |
| |
|
||||||| | || || | |||| || | |||| |||||| ||| ||||||||||||||| |||||||||||||||| ||||||||| |||||| |
|
|
| T |
31162253 |
ttgatccttatgagatgagatatcaaaaaggaaattatgttgaagcctttttcaaacatgaacaaagattccaacaagactctgagatggtgcaaagatg |
31162154 |
T |
|
| Q |
401 |
gagggaagctctgacacaagtcgcc |
425 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
31162153 |
gagggaagctcaaacacaagtcgcc |
31162129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 30 - 458
Target Start/End: Complemental strand, 31160147 - 31159719
Alignment:
| Q |
30 |
tttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttcca |
128 |
Q |
| |
|
|||||||| ||||||| | ||||||||| | |||||||||||| |||| ||||| ||| ||||||| ||||||| |||||||| |||| || |
|
|
| T |
31160147 |
tttagaggccaagacacacacaacaattttgccgatcatctttttgctgcccttcaa-agaaaaggcatcgttgcattcagggatgattctaacctgaag |
31160049 |
T |
|
| Q |
129 |
aaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgct |
228 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| || | ||||| ||| || |||||| ||||||||||||||||| ||||||| |
|
|
| T |
31160048 |
aaaggtgaatccatagcacccgagctccttcatgcaattgaagcctcaaaggtttttattgtactcttctcaaaaaactatgcttcctcaacatggtgct |
31159949 |
T |
|
| Q |
229 |
tgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcccatggtgcgaaagcaaag |
328 |
Q |
| |
|
||| ||| || ||| | |||||| | ||| || || ||| || | |||||| ||| |||||||||||| ||||||| | |||| || | |||| |
|
|
| T |
31159948 |
tgcgagagttggaatacatccttcactgcagtcaagtttctggaactcgtgttctccctattttctatgatgttgatccttctgaggtgagacatcaaaa |
31159849 |
T |
|
| Q |
329 |
tgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctgacacaagtcgccggt |
428 |
Q |
| |
|
||| | |||| | ||||| ||| |||||| ||| ||| ||||||||| || || ||||||| | ||||||||||| | ||| |||||||||||| | |
|
|
| T |
31159848 |
tggaagttatggagaagcccttgccaaacacgaagaaagattccaacatgaatcagagatggtacaaagatggagggcaagtctaacacaagtcgccaat |
31159749 |
T |
|
| Q |
429 |
ctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
||||||||||||||| | ||| |||||||| |
|
|
| T |
31159748 |
ctctctggttgggatatgcatcataagtaa |
31159719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 412
Target Start/End: Complemental strand, 31163657 - 31163523
Alignment:
| Q |
278 |
tgttctgcctgttttctatgatgatgatcctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaa |
377 |
Q |
| |
|
|||||||||| |||||||||| | ||||| | | |||||||||| ||||| || |||| ||||||| ||||| |||||| || ||| |||| |||| |
|
|
| T |
31163657 |
tgttctgcctattttctatgaagttgatctttctgaggtgcgaaagtaaagtcagaattatggtgaagcctttgttaaacataaagaaacattcaaacat |
31163558 |
T |
|
| Q |
378 |
gactctcagatggtgctaagatggagggaagctct |
412 |
Q |
| |
|
|||||| | ||||| | | |||||||||||||||| |
|
|
| T |
31163557 |
gactctgacatggttcaatgatggagggaagctct |
31163523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 178; Significance: 1e-95; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 9 - 458
Target Start/End: Complemental strand, 33307381 - 33306932
Alignment:
| Q |
9 |
tattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcattta |
108 |
Q |
| |
|
|||||||||| ||||||||| || ||||||||||||||||||||||| || ||| || ||||||||||||| | | | | |||||||| |||||||| |
|
|
| T |
33307381 |
tattatgatgtgtttgtcaccttcagaggtgaagacactcgcaacaactttactgattttctttttgatgcccttgaaacaaaaggcatttttgcatttc |
33307282 |
T |
|
| Q |
109 |
gggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaacta |
208 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| |||| ||| ||||| ||||| ||||| |||| ||| |||||||||| ||| ||||||||||||| |
|
|
| T |
33307281 |
gggatgacactaatcttcaaaagggtgaatctatagaacctgagctccttcgagcaatcgaaggatctcgggtttttgttgcagtcttctcaaggaacta |
33307182 |
T |
|
| Q |
209 |
tgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcct |
308 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||| ||||| | ||||||| || ||| | ||||||| |||| |||||||| ||||||| ||||||| |
|
|
| T |
33307181 |
tgcttcctcaacatggtgcctgcaagaattagagaagatatgtaaatgcgttcagagatccagaaaacatattcttcctgttttttatgatgttgatcct |
33307082 |
T |
|
| Q |
309 |
cccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaag |
408 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||| |
|
|
| T |
33307081 |
tctgtggttcgaaagcaaagtgggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaag |
33306982 |
T |
|
| Q |
409 |
ctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||| | ||| || | || |||||||||||||||||| |||||||||| |
|
|
| T |
33306981 |
ctctaaaacatgtggggagtatctctggttgggatctacgtgataagtaa |
33306932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 7 - 458
Target Start/End: Original strand, 31566307 - 31566758
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||||| | || ||||||||||||||| | | | |||| ||| ||| ||| |
|
|
| T |
31566307 |
attattatgatgtatttgtcactttcagaggtgaagacactcgcaacaatttcattgattttctttttgatgcctttgaaacaaaaggtatttttgtatt |
31566406 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
| ||||||| || ||||||| ||||||||||||||||| || ||||||||||| ||||| ||| ||| || |||||||||| ||| ||||||| || |
|
|
| T |
31566407 |
tcgggatgatacaaatcttcaaaaaggtgaatccatagggcctgagcttcttcgagcaatccaaggatctcatgtttttgttgccgtcttctcaagaaat |
31566506 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| ||||||| | | | |||| ||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
31566507 |
tatgcttcctcgacatggtgcttgcaagaattagagaagatttgtgaatgcattgaggaatctgaaaaacatgttcttcttgttttctatgatgttgatc |
31566606 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
|| | ||| |||||||||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||| || |
|
|
| T |
31566607 |
cttctgaggttcgaaagcaaagtgggatttattctgaagcttttgccaaacatgaacaaagattccgacaagactctcagatggtgtcaagatggagaga |
31566706 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||| | |||||| || || ||| |||||||||||||| |||||||||| |
|
|
| T |
31566707 |
agctctaaaacaagtggcgagtatctttggttgggatctacgtgataagtaa |
31566758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 10 - 458
Target Start/End: Complemental strand, 33361392 - 33360944
Alignment:
| Q |
10 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcattta |
108 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| | | |||||||| ||| |||| |
|
|
| T |
33361392 |
attatgatgtgtttgtcatctttagaggtgaagacactcgcaacaatttcactgattttctttttgatgcccttcaa-acaaaaggcattattgtatttt |
33361294 |
T |
|
| Q |
109 |
gggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaacta |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||| |||| ||||| |||| ||| | |||||||||| || | ||||| ||||| |
|
|
| T |
33361293 |
tggatgacactaatcttccaaaaggtgaatccatcggacccgagctcattcgagcaatcgaaggatctcaggtttttgttgcattcttttcaagaaacta |
33361194 |
T |
|
| Q |
209 |
tgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcct |
308 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||| ||||||| | | | ||| |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
33361193 |
tgcttcctcaacatggtgtttgcaagaattagaaaagatatgtgaatgcattaagggatcaggaaaacatgttcttcctgttttctatgatgttgatcct |
33361094 |
T |
|
| Q |
309 |
cccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaag |
408 |
Q |
| |
|
| |||||| |||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||| |||| || ||||||||||| |
|
|
| T |
33361093 |
tctgaggtgcggaagcaaagtgagatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactctaagaaggtgtcaatatggagggaag |
33360994 |
T |
|
| Q |
409 |
ctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||| ||||| | | | ||||||||||||||||||||||||||||| |
|
|
| T |
33360993 |
ctctagagcaagtgggggatatctctggttgggatctacatgataagtaa |
33360944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 33412815 - 33412364
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgc-cttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||||||||||||||||||||||||| || ||||||||||||| ||| || | |||| ||| ||||| |
|
|
| T |
33412815 |
attattatgatgtgtttgtcaccttcagaggtgaagacactcgcaacaatttcactgattatctttttgatgcacttgaaacca-aaggtatttatgcat |
33412717 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
||||||||||||| |||||| |||||||||| ||||| ||| ||||| ||||||||||| |||| ||| | |||| || || ||| | |||||||| |
|
|
| T |
33412716 |
ttagggatgacacaaatcttaaaaaaggtgaagtcataggacctgagctccttcgtgcaatcgaaggatctcaggttttcgtcgcagtcttttcaaggaa |
33412617 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
||||||||||||||| |||||| |||||||||||||||||||| |||||| || || | | || ||||||| ||||| |||||||| |||||| |||| |
|
|
| T |
33412616 |
ctatgcttcctcaacatggtgcctgcaagaattagaaaagatctgtgaatgtgttcagggacctgaaaaacacgttcttcctgttttttatgatattgat |
33412517 |
T |
|
| Q |
306 |
cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggg |
405 |
Q |
| |
|
||| | |||||| |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||| | |||| ||||||||||| |
|
|
| T |
33412516 |
ccttctgaggtgcggaagcaaagtgggatttattgtgaatcttttgtcaaacatgaacaaagattccaacaagaccctcataaggtgtcaagatggaggg |
33412417 |
T |
|
| Q |
406 |
aagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
||||| | | ||||| | || |||||||||||||||||| |||||||||| |
|
|
| T |
33412416 |
aagctttaaaccaagtggggagtatctctggttgggatctacgtgataagtaa |
33412364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 33403508 - 33403057
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
||||||| |||| |||| |||| |||||||||||||||||||| |||||||||||| || ||||||||||||| | | | | |||||||| ||||||| |
|
|
| T |
33403508 |
attattacgatgtgtttatcacctttagaggtgaagacactcggaacaatttcactgattttctttttgatgcccttgaaacaaaaggcatttttgcatt |
33403409 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
| | |||||||||||||||| | | ||||||||| ||| ||||||||||||||| ||||| ||| | | | |||| |||| ||| | ||||||||| |
|
|
| T |
33403408 |
tcgagatgacactaatcttcaacagggtgaatccttagaacccgagcttcttcgagcaatcaaaggatttcaggttttcgttgtcgtcttttcaaggaac |
33403309 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||| ||||||||| | | ||| |||||||||||| | |||||||||||||||| ||||| |
|
|
| T |
33403308 |
tatgcttcctcaacatggtgcttaaaagaattagagaagatatgtgaatgcgttaagggatccaaaaaacatgttattcctgttttctatgatgttgatc |
33403209 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
|| | ||| |||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||||| || | |||||||| |||||||||||| |
|
|
| T |
33403208 |
cttctgaggttcgaaagcaaagtggtatttattgtgaagcctttgtcaagcatgaaaaaagattccaacaaggctttgagatggtgtcaagatggaggga |
33403109 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||| | |||||| | || | ||||||||||||||| |||||||||| |
|
|
| T |
33403108 |
agctctaaaacaagtggggagtatatctggttgggatctatgtgataagtaa |
33403057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 33265779 - 33265328
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||| | | |||||||| ||| || |
|
|
| T |
33265779 |
attattatgatgtatttgtcaccttcagaggtgaagatactcggaacaatttcacagattttctttttgatgcccttcaa-acaaaaggcattattgtat |
33265681 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |||| ||| | |||||||||||||| | |||| || |
|
|
| T |
33265680 |
tttcggatgacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataaa |
33265581 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | | ||| |||||||||||| || ||||||||||||| |||| |
|
|
| T |
33265580 |
ctatgcttcctcaacatggtgtttacaagaattagaaaagatatgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatgttgat |
33265481 |
T |
|
| Q |
306 |
-cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagg |
404 |
Q |
| |
|
|||| || ||| |||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||| |||| || ||||||| |
|
|
| T |
33265480 |
ccctctgat-gtgagaaagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaagaacatcagaaggtgtcaaaatggagg |
33265382 |
T |
|
| Q |
405 |
gaagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| ||||| | |||||| | || |||||||||||||||||| |||||||||| |
|
|
| T |
33265381 |
gacgctctaaaacaagtggggagtatctctggttgggatctacgtgataagtaa |
33265328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 33274923 - 33274472
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcat |
105 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||| ||||| ||||||||||| || ||||||||||||| ||||| | | |||||||| ||| || |
|
|
| T |
33274923 |
attattatgatgtatttgtcaccttcagaggtgaagatactcggaacaatttcacagattttctttttgatgcccttcaa-acaaaaggcattattgtat |
33274825 |
T |
|
| Q |
106 |
ttagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaa |
205 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| |||| ||| | |||||||||||||| | |||| || |
|
|
| T |
33274824 |
tttcggatgacactaatcttccaaaaggtgaatccattggacccgagctccttcgagcaatcgaaggatctcaagtttttgttgcggtcttttcaataaa |
33274725 |
T |
|
| Q |
206 |
ctatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgat |
305 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||||||||||| ||||||||| | | ||| |||||||||||| || ||||||||||||| |||| |
|
|
| T |
33274724 |
ctatgcttcctcaacatggtgtttacaagaattagaaaagatatgtgaatgcgttaagggatcaggaaaacatgttcttccagttttctatgatgttgat |
33274625 |
T |
|
| Q |
306 |
-cctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagg |
404 |
Q |
| |
|
|||| || ||| |||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||| ||||| |||| || ||||||| |
|
|
| T |
33274624 |
ccctctgat-gtgagaaagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaagaacatcagaaggtgtcaaaatggagg |
33274526 |
T |
|
| Q |
405 |
gaagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| ||||| | |||||| | || |||||||||||||||||| |||||||||| |
|
|
| T |
33274525 |
gacgctctaaaacaagtggggagtatctctggttgggatctacgtgataagtaa |
33274472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 10 - 412
Target Start/End: Complemental strand, 33060449 - 33060047
Alignment:
| Q |
10 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttag |
109 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||| | | | | |||||||| | | |||| | |
|
|
| T |
33060449 |
attatgatgtgtttgtcacctttagaggtgaagatactcgcaacaatttcactgattttctttttgatgcccttgaaacaaaaggcattatggtatttcg |
33060350 |
T |
|
| Q |
110 |
ggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactat |
209 |
Q |
| |
|
||||| || |||||||| ||||||||||| ||||| ||| |||||| |||||||||| ||| ||| | ||| |||||| || |||||| ||||||| |
|
|
| T |
33060349 |
ggatgtcattaatcttcaaaaaggtgaatgcataggacctgagctttttcgtgcaatcgaaatatctcaggtttacgttgcgatcttctcaaagaactat |
33060250 |
T |
|
| Q |
210 |
gcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctc |
309 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||| | | | || |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
33060249 |
gcttcctcaacgtggtgcttgcaagaattagaaaagatatgtgaatgcattaaggggtcgggaaaacatgttcttcctgttttctatgatgttgatcctt |
33060150 |
T |
|
| Q |
310 |
ccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagc |
409 |
Q |
| |
|
| |||||| ||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||| || |||| ||||||||| ||||| |
|
|
| T |
33060149 |
ctgaggtgcggaagcaaagtggaatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactctatgaaggtgtcaagatggagagaagc |
33060050 |
T |
|
| Q |
410 |
tct |
412 |
Q |
| |
|
||| |
|
|
| T |
33060049 |
tct |
33060047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 7 - 458
Target Start/End: Complemental strand, 33390970 - 33390519
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||||||||||||||| | || ||||||||||||| | | | | |||||||||||| ||| |
|
|
| T |
33390970 |
attattatgatgtgtttgtcaccttccgaggtgaagacactcgcaacaatttcattgattttctttttgatgccctggaaacaaaaggcattcttgtatt |
33390871 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
| ||||| ||| ||||||| ||||||||||||||||| ||| || ||||||| |||| |||| ||| | ||| ||||||||| ||||||| ||| |
|
|
| T |
33390870 |
tcgggataacagaaatcttcaaaaaggtgaatccataggacctgaacttcttcaatcaatcgaaggatctcaggtttatgttgcggttttctcaagaaac |
33390771 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
||||||| |||||| ||||| ||||||||| |||| ||||| ||||| ||||| | ||| |||||| |||||| |||||||| ||||||| ||||| |
|
|
| T |
33390770 |
tatgctttctcaacatggtgtttgcaagaaatagagaagatttgggaatgtgtccaaggatccgaaaaacttgttcttcctgttttttatgatgttgatc |
33390671 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
|| | ||| |||||||||||||| |||||| | |||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| || |
|
|
| T |
33390670 |
cttctgaggttcgaaagcaaagtggaatttatgataaagcttttgtcaaacatgaacaaagattccaacaaaactctcagatggtgtcaagatggagaga |
33390571 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||| | |||||| | || ||||||||||||||||| |||||||||| |
|
|
| T |
33390570 |
agctctaaaacaagtggggagtatctctggttgggatctatgtgataagtaa |
33390519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 20 - 458
Target Start/End: Complemental strand, 33288459 - 33288021
Alignment:
| Q |
20 |
gtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacact |
119 |
Q |
| |
|
|||| |||| |||||||| || ||||||||||||||||||||| | |||| || ||||| | || | | | || ||| |||||||||||||||||| |
|
|
| T |
33288459 |
gtttatcacctttagaggcgatgacactcgcaacaatttcactggttatctattagatgctcttaaaacaaacggtatttatgcatttagggatgacacc |
33288360 |
T |
|
| Q |
120 |
aatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaa |
219 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||| ||||| ||||| |||| || | |||| ||||| || ||||||| |||||||||||||||| |
|
|
| T |
33288359 |
aatcttcaaaaaggtgaatccataggacctgagctccttcgagcaatcgaaggatcccaggttttcgttgcagtattctcaagaaactatgcttcctcaa |
33288260 |
T |
|
| Q |
220 |
cttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcccatggtgcg |
319 |
Q |
| |
|
| ||||||||||| |||||||||||||| |||||| || || ||||| | |||||| |||| || ||||||||||||| ||||||| | |||||| |
|
|
| T |
33288259 |
catggtgcttgcaggaattagaaaagatatgtgaatgtgttcatgtatcaagaaaacacattcttccagttttctatgatgttgatccttctgaggtgcg |
33288160 |
T |
|
| Q |
320 |
aaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctgacacaa |
419 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || | |||| |
|
|
| T |
33288159 |
aaagcaaagtgggatttatggtgaagcctttaccatacatgaacaaacattccaacaagactctcagatggtgtcaagatggagggaagccctaaaacaa |
33288060 |
T |
|
| Q |
420 |
gtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| | || || |||||||||||||| |||||||||| |
|
|
| T |
33288059 |
gtggggagtatcgctggttgggatctatgtgataagtaa |
33288021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 7 - 458
Target Start/End: Original strand, 33641800 - 33642251
Alignment:
| Q |
7 |
attattatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatt |
106 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| || ||||||||||||| | | | |||||||| | | ||| |
|
|
| T |
33641800 |
attattatgatgtgtttgtcacctacagaggtgaagacactcgcaacaatttgactgattttctttttgatgcccttgaatcaaaaggcattatggtatt |
33641899 |
T |
|
| Q |
107 |
tagggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaac |
206 |
Q |
| |
|
| ||||||||| |||||||| ||||||||||| |||| | | ||||||||||| ||||| ||| ||| || ||| || || ||| ||||||| ||| |
|
|
| T |
33641900 |
tcgggatgacattaatcttcaaaaaggtgaatatataggatctgagcttcttcgagcaatcgaaagatctcatgtttacgtagcagtcttctcaagaaac |
33641999 |
T |
|
| Q |
207 |
tatgcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatc |
306 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||| ||||| ||||||| | | | || ||||||||||||| ||| |||| ||||||| ||||| |
|
|
| T |
33642000 |
tatgcttcctcaacatggtgccttcaagaattagagaagatttgtgaatgcattgagggattagaaaaacatgttcttcctattttttatgatgttgatc |
33642099 |
T |
|
| Q |
307 |
ctcccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggaggga |
406 |
Q |
| |
|
|| | ||| |||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||| |
|
|
| T |
33642100 |
cttctgaggtacgaaagcaaagtggaatttattgggaagcttttgtcaaacatgaacaaagattccaacaagactttcaaatggtgtcaagatggaggga |
33642199 |
T |
|
| Q |
407 |
agctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||||| | |||||| | || |||||||||||||||||| |||||||||| |
|
|
| T |
33642200 |
agctctaaaacaagtggggagtatctctggttgggatctacgtgataagtaa |
33642251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 227 - 458
Target Start/End: Complemental strand, 9169535 - 9169304
Alignment:
| Q |
227 |
cttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcccatggtgcgaaagcaa |
326 |
Q |
| |
|
||||||||||||||||||||| |||||| || | ||||| |||||||||||| | |||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
9169535 |
cttgcaagaattagaaaagatatgtgaatgtgttcgtgtatcaggaaaacatgttcttcttgttttctatgatgttgatccttctgaggtgcgaaagcaa |
9169436 |
T |
|
| Q |
327 |
agtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctgacacaagtcgccg |
426 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||| || |||| ||||| |||||| | |||||||| ||| | | | |||||| | |
|
|
| T |
9169435 |
agtgggatttattgtgaagcatttgccaaacatgaacaaagattcaaataagattctcacatggtgtcaggatggaggaaaggtttaaaacaagtgggga |
9169336 |
T |
|
| Q |
427 |
gtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| ||||||||||||| |||| |||||||||| |
|
|
| T |
9169335 |
gtatctctggttgggacctacgtgataagtaa |
9169304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 12782351 - 12782164
Alignment:
| Q |
53 |
caatttcacttatcatctttttgatgcc-ttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccga |
151 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||| ||| || | ||| || |||| || |||||||||||||||| ||||||| | ||||||||| |||| |
|
|
| T |
12782351 |
caatttcactgatcatctttttggtgcccttcaa-agaaaaagaatttttacattcagagatgacactaatcttcaaaaaggtaattccatagcatccga |
12782253 |
T |
|
| Q |
152 |
gcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaacttggtgcttgcaagaattag |
240 |
Q |
| |
|
|| ||| |||||||||| ||| | |||| ||| || |||| | ||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
12782252 |
cctcattcaagcaattgaaggctctcaggttttcattgttgtattctctaaaaactatgcttcttcaacttggtgtttgcgagaattag |
12782164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 12785790 - 12785693
Alignment:
| Q |
53 |
caatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagggatgacactaatcttccaaaaggtgaatccatagcacccg |
150 |
Q |
| |
|
||||||||| |||||||||||| |||| | | ||| ||||||| |||||| || ||||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
12785790 |
caatttcaccgatcatctttttgctgccctacaaagacgaggcattaatgcattcagagatgacactaaacttaaaaaaggtgaattcatagcacccg |
12785693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 12781450 - 12781402
Alignment:
| Q |
203 |
gaactatgcttcctcaacttggtgcttgcaagaattagaaaagatcctt |
251 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| ||| | |||||| |
|
|
| T |
12781450 |
gaactatgcttcctcaacttggtgtttgcgagaattggaatacatcctt |
12781402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 13608290 - 13608326
Alignment:
| Q |
39 |
gaagacactcgcaacaatttcacttatcatctttttg |
75 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
13608290 |
gaagacacgcgcaacaatttcactgatcatctttttg |
13608326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 10 - 458
Target Start/End: Original strand, 17437875 - 17438323
Alignment:
| Q |
10 |
attatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttag |
109 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| |||||||||||||||||| || ||||||||| ||| | | ||| ||| |||| |||||||| | |
|
|
| T |
17437875 |
attatgatgtgtttgtcacctttagaggtgaagatactcgcaacaatttcactgattttctttttgacgcccttgaaagaaaagacatttttgcatttcg |
17437974 |
T |
|
| Q |
110 |
ggatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactat |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | | ||||||||||| ||||| |||| ||| | ||||||||||||| ||||||| ||||| |
|
|
| T |
17437975 |
agatgacactaatcttcaaaaaggtgaatccataggatctgagcttcttcgagcaatagaaggatctcaggtttttgttgcggttttctcaagatactat |
17438074 |
T |
|
| Q |
210 |
gcttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctc |
309 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||||||||| ||||||||| || || | |||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
17438075 |
gcttcctcaacatggtgtttggaagaattagaaaagatatgtgaatgcgttcaggtgccaggaaaacatgttcttcctgttttctatgatgttgatcctt |
17438174 |
T |
|
| Q |
310 |
ccatggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagc |
409 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||| |
|
|
| T |
17438175 |
ctgaggtgcgaaagcaaagtgggatttatcatgaagcttttgtcaaacatgaacaaagattccaacaagaccttcagaaggtgtcaagatggagggaagc |
17438274 |
T |
|
| Q |
410 |
tctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
||| | ||||| | || || ||||||||||||||| |||||||||| |
|
|
| T |
17438275 |
tctaaagcaagtggggagtatcgctggttgggatctacgtgataagtaa |
17438323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 11 - 458
Target Start/End: Complemental strand, 1039 - 592
Alignment:
| Q |
11 |
ttatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagg |
110 |
Q |
| |
|
|||||| | ||||||||| || ||||||||||| |||||||||||||||||| || |||||||| |||| | | ||| |||| ||| ||| || ||| |
|
|
| T |
1039 |
ttatgacgtgtttgtcaccttcagaggtgaagatactcgcaacaatttcactaattttctttttgctgcccttgaaagaaaaggtatttatgctttcagg |
940 |
T |
|
| Q |
111 |
gatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatg |
210 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||| ||||| ||||| |||| |||| ||| | |||| ||||| ||| | ||||| ||||||| |
|
|
| T |
939 |
gatgacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaactatg |
840 |
T |
|
| Q |
211 |
cttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcc |
310 |
Q |
| |
|
|||| ||||| |||||| ||||||||||||| ||||| ||||||| || | | |||| |||| ||||||| ||| ||||||||| || |||||| | |
|
|
| T |
839 |
cttcttcaacatggtgcctgcaagaattagagaagatttgtgaatgcatcaagggatctggaaaatatgttcttcctattttctatggtgtcgatccttc |
740 |
T |
|
| Q |
311 |
catggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagct |
410 |
Q |
| |
|
||| ||||||||||||||||||||| || | |||| |||||||||||||| |||| |||||||| |||| | |||| |||||||||||||||| |
|
|
| T |
739 |
tgaggtaaaaaagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaacaagaccctcataaggtgtcaagatggagggaagct |
640 |
T |
|
| Q |
411 |
ctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| | ||||| | || || ||||||||||||||| |||||||||| |
|
|
| T |
639 |
ctaaaccaagtggggagtatcgctggttgggatctacgtgataagtaa |
592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 11 - 458
Target Start/End: Complemental strand, 9800 - 9353
Alignment:
| Q |
11 |
ttatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttgatgccttcaacagagaaggcattcttgcatttagg |
110 |
Q |
| |
|
|||||| | ||||||||| || ||||||||||| |||||||||||||||||| || |||||||| |||| | | ||| |||| ||| ||| || ||| |
|
|
| T |
9800 |
ttatgacgtgtttgtcaccttcagaggtgaagatactcgcaacaatttcactaattttctttttgctgcccttgaaagaaaaggtatttatgctttcagg |
9701 |
T |
|
| Q |
111 |
gatgacactaatcttccaaaaggtgaatccatagcacccgagcttcttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatg |
210 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||| ||||| ||||| |||| |||| ||| | |||| ||||| ||| | ||||| ||||||| |
|
|
| T |
9700 |
gatgacacaaatcttccaaagggtgaatccataggacctgagctccttcgaacaatcgaaggatctcaggttttcgttgctgtcttatcaagaaactatg |
9601 |
T |
|
| Q |
211 |
cttcctcaacttggtgcttgcaagaattagaaaagatccttgaatgcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgatgatcctcc |
310 |
Q |
| |
|
|||| ||||| |||||| ||||||||||||| ||||| ||||||| || | | |||| |||| ||||||| ||| ||||||||| || |||||| | |
|
|
| T |
9600 |
cttcttcaacatggtgcctgcaagaattagagaagatttgtgaatgcatcaagggatctggaaaatatgttcttcctattttctatggtgtcgatccttc |
9501 |
T |
|
| Q |
311 |
catggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagct |
410 |
Q |
| |
|
||| ||||||||||||||||||||| || | |||| |||||||||||||| |||| |||||||| |||| | |||| |||||||||||||||| |
|
|
| T |
9500 |
tgaggtaaaaaagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaacaagaccctcataaggtgtcaagatggagggaagct |
9401 |
T |
|
| Q |
411 |
ctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|| | ||||| | || || ||||||||||||||| |||||||||| |
|
|
| T |
9400 |
ctaaaccaagtggggagtatcgctggttgggatctacgtgataagtaa |
9353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 6473386 - 6473323
Alignment:
| Q |
12 |
tatgatgcgtttgtcacttttagaggtgaagacactcgcaacaatttcacttatcatctttttg |
75 |
Q |
| |
|
||||||| |||||| | ||| |||| |||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
6473386 |
tatgatgtgtttgtgagctttcgaggcgaagacacgcgcaacaatttcactgatcatctttttg |
6473323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 458
Target Start/End: Complemental strand, 6473008 - 6472940
Alignment:
| Q |
390 |
gtgctaagatggagggaagctctgacacaagtcgccggtctctctggttgggatctacatgataagtaa |
458 |
Q |
| |
|
|||| ||||||||||| ||| || |||||||| ||| |||||||||||||||| || | ||||||||| |
|
|
| T |
6473008 |
gtgcaaagatggaggggagccctaacacaagtagccaatctctctggttgggatataaaggataagtaa |
6472940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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