View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2640-Insertion-19 (Length: 432)
Name: NF2640-Insertion-19
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640-Insertion-19 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 35 - 432
Target Start/End: Original strand, 34619398 - 34619795
Alignment:
| Q |
35 |
ttatttctttcaacatgctttgttccagttttgataaggtaaagaaggcctttggtttgcatctcaaccatcaaggagatctatcacttacttttaaacc |
134 |
Q |
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| T |
34619398 |
ttatttctttcaacatgctttgttccagttttgataaggtaaagaaggcttttggtttgcatctcaaccatcaaggagatctatcacttacttttaaacc |
34619497 |
T |
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| Q |
135 |
atttccaactgtttcaggatataattaaatttttgaaacctgctattattttcaaagttccataaaagtgttaaatactaaggatgatctaaactattac |
234 |
Q |
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| T |
34619498 |
atttccaaccgtttcaggatataattaaatttttgaaacctgctatcattttcaaagttccataaaaatgttaaatactacggatgatctaaactattac |
34619597 |
T |
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| Q |
235 |
acaacacatagatataatcattttgctgttgacagttgtttaattatccaaaaaataggtaccattaggaaatatgaaacaacttaaaacaataaaattg |
334 |
Q |
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| T |
34619598 |
acaacacatagatataatcattttgctgttgacagttgtttaattatccaaaaaataggtaccattaggaaatatgaaacaacctaaaacaataaaatta |
34619697 |
T |
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| Q |
335 |
gaactggttttttaccctatagttgctaataaaaattggcaggaaacccatagccacattgaagataaccaaggaagcaactttttctgctacagtga |
432 |
Q |
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| T |
34619698 |
gaactggtttttgaccctatagttgctaataaaaattggcaggaaacccatagccacattgaagataaccaaggaagcaactttttctgctacagtga |
34619795 |
T |
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