View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2640-Insertion-23 (Length: 377)
Name: NF2640-Insertion-23
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640-Insertion-23 |
 | |
|
| [»] chr6 (40 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] scaffold0419 (1 HSPs) |
| |
|
| [»] scaffold0349 (1 HSPs) |
| |
|
| [»] scaffold0277 (2 HSPs) |
| |
|
| [»] scaffold0003 (1 HSPs) |
| |
|
| [»] chr4 (6 HSPs) |
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| [»] chr8 (1 HSPs) |
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| [»] scaffold0038 (2 HSPs) |
| | |
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| [»] scaffold0019 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 362; Significance: 0; HSPs: 40)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 31284982 - 31285351
Alignment:
| Q |
8 |
aaagcttaaatgggaaccacaatttatatattcttaaactagaattagttttttataactcaaaacaatgaaaattttataatataattatcaatacatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31284982 |
aaagcttaaatgggaaccacaatttatatattcttaaactagaattagttttttataactcaaaacaatgaaaattttataatataattatcaatacatg |
31285081 |
T |
|
| Q |
108 |
aatgtgattgtcatgttgttgtttggactaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaac |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285082 |
aatgtgattgtcatgttgttgtttggactaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaac |
31285181 |
T |
|
| Q |
208 |
aagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaag |
307 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285182 |
aagatcaatcgtgtgcccttacatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaag |
31285281 |
T |
|
| Q |
308 |
gggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285282 |
gggtacacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
31285351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 26623696 - 26624063
Alignment:
| Q |
8 |
aaagcttaaatgggaaccacaatttatatattcttaaactagaattagtttttt-ataactcaaaacaatgaaaattttataatataattatcaatacat |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
26623696 |
aaagcttaaatgggaaaaacaatttatatattcttaaactaaaattagtttttttataactcaa--caattaaaattt-ataatataattattaatacat |
26623792 |
T |
|
| Q |
107 |
gaatgtgattgtcatgttgttgtttggactaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaa |
206 |
Q |
| |
|
|||||| |||||||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||| | | |||||||||||||||||||| |
|
|
| T |
26623793 |
gaatgttattgtcatgttgatgtttctactaacatatctagctggacatgaacagatatgaatatgattttattgaaaagatagtcaaatacatctccaa |
26623892 |
T |
|
| Q |
207 |
caagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaa |
306 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || |||||||||||||| ||| || | ||||||||||||||| ||||||||||| | | || || | |
|
|
| T |
26623893 |
caagatcaatcgtgtgcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgat |
26623992 |
T |
|
| Q |
307 |
ggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26623993 |
ggggtccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataa |
26624063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 26729673 - 26730040
Alignment:
| Q |
8 |
aaagcttaaatgggaaccacaatttatatattcttaaactagaattagtttttt-ataactcaaaacaatgaaaattttataatataattatcaatacat |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
26729673 |
aaagcttaaatgggaaaaacaatttatatattcttaaactaaaattagtttttttataactcaa--caattaaaattt-ataatataattattaatacat |
26729769 |
T |
|
| Q |
107 |
gaatgtgattgtcatgttgttgtttggactaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaa |
206 |
Q |
| |
|
|||||| |||||||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||||| | | |||||||||||||||||||| |
|
|
| T |
26729770 |
gaatgttattgtcatgttgatgtttctactaacatatctagctggacatgaacagatatgaatatgattttattgaaaagatagtcaaatacatctccaa |
26729869 |
T |
|
| Q |
207 |
caagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaa |
306 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || |||||||||||||| ||| || | ||||||||||||||| ||||||||||| | | || || | |
|
|
| T |
26729870 |
caagatcaatcgtgtgcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgat |
26729969 |
T |
|
| Q |
307 |
ggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||| ||||| ||| | |||||||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26729970 |
ggggtccatatggttggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataa |
26730040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 85 - 377
Target Start/End: Original strand, 26802946 - 26803238
Alignment:
| Q |
85 |
tataatataattatcaatacatgaatgtgattgtcatgttgtt-gtttggactaacatatctagttgaacatgaacagatatgaatatgattttattgga |
183 |
Q |
| |
|
||||||||| |||| | |||||| |||||||||| |||||||| || |||||| ||||| |||| ||||||| ||||||||||| | || |||||| |
|
|
| T |
26802946 |
tataatata-ttatgagtacatggatgtgattgtgatgttgttagtacatactaacttatcttgttggacatgaatagatatgaatacaagttgattgga |
26803044 |
T |
|
| Q |
184 |
gacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgc |
283 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| | | |||| ||||| ||||||||| || |
|
|
| T |
26803045 |
gagatagtcaaatacatctccaacaagatcaatcgtcagcccttacatgttgctaattaccctgttggattgcactctcgagtacaagaagtgaaatcgc |
26803144 |
T |
|
| Q |
284 |
ttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||| ||| | || || | |||||||| ||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26803145 |
ttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataa |
26803238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 28786805 - 28787030
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
28786805 |
acatgaatagatatgaatacaagtttattggagatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg |
28786904 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| | | | || || | || |||| |||||||||||||||||| | ||||||||||||||| |
|
|
| T |
28786905 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggtaaa |
28787004 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||| || |||||| ||||| |
|
|
| T |
28787005 |
tcaacacttggaaaagcaatttataa |
28787030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 27427227 - 27427002
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| || |||||||| | |||||||||||||||||||||||||||| ||| | ||||| ||||||||| |||||||||||| |
|
|
| T |
27427227 |
acatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccctgttgg |
27427128 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
27427127 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaa |
27427028 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
27427027 |
tcaacacttgcaagagcaatctataa |
27427002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 27718114 - 27717889
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||| |
|
|
| T |
27718114 |
acatgaatagatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgttgg |
27718015 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| | | || || | || ||||||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
27718014 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggtaaa |
27717915 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||||| |||||| ||||| |
|
|
| T |
27717914 |
tcaacacttgcaaaagcaatttataa |
27717889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 160 - 377
Target Start/End: Original strand, 28792934 - 28793151
Alignment:
| Q |
160 |
agatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagt |
259 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
28792934 |
agatatgaatacaagtttattggagatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttggattgcagt |
28793033 |
T |
|
| Q |
260 |
ttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacact |
359 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| | | | || || | || |||| |||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
28793034 |
ctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggtaaatcaacact |
28793133 |
T |
|
| Q |
360 |
tgcaagagcaatctataa |
377 |
Q |
| |
|
|| || |||||| ||||| |
|
|
| T |
28793134 |
tggaaaagcaatttataa |
28793151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 153 - 377
Target Start/End: Complemental strand, 27610734 - 27610510
Alignment:
| Q |
153 |
catgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgga |
252 |
Q |
| |
|
|||||| ||||||||||| || |||| |||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
27610734 |
catgaatagatatgaatacgagtttactggagagatagtcaaatacatctccaacaagatcagtcgtcaacccttacatgttgccaattaccctgttgga |
27610635 |
T |
|
| Q |
253 |
tttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaat |
352 |
Q |
| |
|
|| ||| || | ||||| ||||||||| |||||||||| | | || || | || ||||||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
27610634 |
ttgcagtctcaagtacaagaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggtaaat |
27610535 |
T |
|
| Q |
353 |
caacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||| |||||| ||||| |
|
|
| T |
27610534 |
caacacttgcaaaagcaatttataa |
27610510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 27592654 - 27592411
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
27592654 |
actaacttatcttattgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagcccttaaatgt |
27592555 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| | | | || || | |||||||| ||||| ||| |||||||| |
|
|
| T |
27592554 |
tgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatggg |
27592455 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|| ||||||||||| |||||||||||||| | |||||| ||||| |
|
|
| T |
27592454 |
attggaggcttgggaaaatcaacacttgcgaaagcaatttataa |
27592411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 27706037 - 27705794
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||||| ||| |||||| |||| |
|
|
| T |
27706037 |
actaacttatcttattgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacatcccttacatgt |
27705938 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| ||||||||||||||| ||||||||| ||| | || || | |||||||| ||||| ||| ||| ||| |
|
|
| T |
27705937 |
tgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcacttcttgatgagggacctgatgatggggtccatatggttggaatttttggc |
27705838 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27705837 |
attggaggcttgggtaaatcaacacttgcaagagcaatttataa |
27705794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 160 - 377
Target Start/End: Complemental strand, 27698193 - 27697976
Alignment:
| Q |
160 |
agatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagt |
259 |
Q |
| |
|
||||||||||| | ||||||| ||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
27698193 |
agatatgaatacaagtttattgaagagatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttggattacagt |
27698094 |
T |
|
| Q |
260 |
ttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacact |
359 |
Q |
| |
|
|| | ||||| |||||||| |||||||||| | | || || | |||||||| ||||| ||| ||| |||||| ||||||||||| ||||||||||| |
|
|
| T |
27698093 |
ctcaagtacaaagagtgaaatcaattcttgataatggatctgatgatggggtccatatggttggaatttttgggattggaggcttgggaaaatcaacact |
27697994 |
T |
|
| Q |
360 |
tgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
27697993 |
tgcaagagcaatctataa |
27697976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 134 - 377
Target Start/End: Original strand, 27679499 - 27679742
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
27679499 |
actaacttatcttattgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagcccttacatgt |
27679598 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||| | | || | |||||||| ||||| ||| ||||||| |
|
|
| T |
27679599 |
tgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggatccgatgatggggtccatatggttggaatttatggc |
27679698 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|| ||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
27679699 |
attggaggtttggggaaatcaacacttgcaagacaaatctataa |
27679742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 134 - 362
Target Start/End: Original strand, 26647028 - 26647256
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| || | ||||||| ||||||||||| | |||||||| | |||||| || ||||||||||||||||||||||||| ||| |||| |
|
|
| T |
26647028 |
actaacttatcttgtgggacatgaatagatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgtcattttacatgt |
26647127 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| |||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||| || || |||||||||| ||||||||||||||||| |
|
|
| T |
26647128 |
agccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggt |
26647227 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgc |
362 |
Q |
| |
|
| ||||| |||||||||||||||||||| |
|
|
| T |
26647228 |
actggaggtttgggtaaatcaacacttgc |
26647256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 134 - 362
Target Start/End: Original strand, 26752996 - 26753224
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| || | ||||||| ||||||||||| | |||||||| | |||||| || ||||||||||||||||||||||||| ||| |||| |
|
|
| T |
26752996 |
actaacttatcttgtgggacatgaatagatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgtcattttacatgt |
26753095 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| |||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||| || || |||||||||| ||||||||||||||||| |
|
|
| T |
26753096 |
agccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggt |
26753195 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgc |
362 |
Q |
| |
|
| ||||| |||||||||||||||||||| |
|
|
| T |
26753196 |
actggaggtttgggtaaatcaacacttgc |
26753224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 26656532 - 26656757
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||| | ||||||||| |||||||| |||||||||||||||| ||| |||||||||| ||||||||||| |
|
|
| T |
26656532 |
acatgaatagatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg |
26656631 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| |||||||||||||||||||||||||||||| | |||| | | ||| | |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
26656632 |
attagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaa |
26656731 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||| | |||||| ||||| |
|
|
| T |
26656732 |
tcaacacttgccaaagcaatttataa |
26656757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 26762503 - 26762728
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||| | ||||||||| |||||||| |||||||||||||||| ||| |||||||||| ||||||||||| |
|
|
| T |
26762503 |
acatgaatagatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg |
26762602 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| |||||||||||||||||||||||||||||| | |||| | | ||| | |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
26762603 |
attagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaa |
26762702 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||| | |||||| ||||| |
|
|
| T |
26762703 |
tcaacacttgccaaagcaatttataa |
26762728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 27604337 - 27604094
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| || |||||||| | ||||| ||| | |||||||||||||||| |||| ||||||| |||| |
|
|
| T |
27604337 |
actaacttatcttattggacatgaatagatatgaatacgagcttattggaaagatagtgaaagaaatctccaacaagatcagtcgtcagcccttacatgt |
27604238 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||||||| ||| ||||||| ||| |||| ||||||||||||||| ||||||||| | | || || | || ||||||||||||||||||||||| |
|
|
| T |
27604237 |
tgccaattatcctattggattgcagtctcgagtacaacaagtgaaatctcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggt |
27604138 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
| ||||| |||||||||||||||||||||| |||||| ||||| |
|
|
| T |
27604137 |
actggaggattgggtaaatcaacacttgcaaaagcaatttataa |
27604094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 27677253 - 27677010
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| | |||||||| | |||||||||||||||||||||||||||| || |||||| |||| |
|
|
| T |
27677253 |
actaacttatcttattgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcaacaacccttacatgt |
27677154 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| |||||||| |||||| |||||||||| | | | || || | |||||||| ||||| ||| |||||||| |
|
|
| T |
27677153 |
tgccacttaccctgttggattgcagtctcgagtacaacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatggg |
27677054 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|| ||||||||||| |||||||||||||| | |||||| ||||| |
|
|
| T |
27677053 |
attggaggcttgggaaaatcaacacttgcgaaagcaatttataa |
27677010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 152 - 361
Target Start/End: Original strand, 28781668 - 28781877
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | |||||||| || |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||| |
|
|
| T |
28781668 |
acatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcacttacatgttgccaattaccctgttgg |
28781767 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgat-aaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaa |
350 |
Q |
| |
|
||| ||| ||| ||||||||||||||| |||||||| | ||||| | | |||| || ||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
28781768 |
attacagtcccgagtacaacaagtgaaatcgcttcttggtgaaggata-tgataatggagtcaggatggtaggactttatggtactggaggcttgggtaa |
28781866 |
T |
|
| Q |
351 |
atcaacacttg |
361 |
Q |
| |
|
||||||||||| |
|
|
| T |
28781867 |
atcaacacttg |
28781877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 26884637 - 26884862
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||| ||||| || ||||| || | |||||| || | |||||| |||| ||||||||||| ||| |||| ||||| ||||||||||| |
|
|
| T |
26884637 |
acatgaatagatacgaatacgagtttatcgggaagatagtcgaagatatctccgacaaaatcaatcgtgttgttttacatgtagccaaataccctgttgg |
26884736 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| ||| |||||||| | ||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| | ||||||||||||||| |
|
|
| T |
26884737 |
attacagtaccgagtacaacaattaaaattgcttcttgataaggaatctaacgaaggggtacacatggtaggaatttatggtactggaggcttgggtaaa |
26884836 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||||| |||||| ||||| |
|
|
| T |
26884837 |
tcaacacttgcaaaagcaatttataa |
26884862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 27530934 - 27530691
Alignment:
| Q |
134 |
actaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgt |
233 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||||||||||| || ||||||||| | |||||| || |||| ||||||| ||| | ||||| ||||||| |||| |
|
|
| T |
27530934 |
actaacttatcttattggacatgaatagatatgaatacgagtttattggaaagatagtcgaagacatttccaacaggattagtcgtgagcccttagatgt |
27530835 |
T |
|
| Q |
234 |
tgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggg |
333 |
Q |
| |
|
|||||| || ||||||||||| ||| ||| ||||||| |||||| || ||||||| | || || || | | |||||||||||||||||||||||| |
|
|
| T |
27530834 |
tgccaaatatcctgttggattacagtcccgagtacaacatgtgaaagggcatcttgatgaaaaatctgatgatgaggtccacatggtaggactttatggt |
27530735 |
T |
|
| Q |
334 |
ataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
| |||||| | ||||||||||||||||||| |||||| ||||| |
|
|
| T |
27530734 |
actggaggcataggtaaatcaacacttgcaaaagcaatttataa |
27530691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 235 - 377
Target Start/End: Original strand, 26862230 - 26862372
Alignment:
| Q |
235 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
334 |
Q |
| |
|
||||| |||||||||||||| |||| ||| || |||||||||||||||||||||||| |||| || || ||||||| |||||||||||||||||||| | |
|
|
| T |
26862230 |
gccaaataccctgttggattaaagtcccgagtagaacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggta |
26862329 |
T |
|
| Q |
335 |
taggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||| |||| |||||||||||||||| |||||| ||||| |
|
|
| T |
26862330 |
ctggaggcatggggaaatcaacacttgcaaaagcaatttataa |
26862372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 377
Target Start/End: Complemental strand, 27337630 - 27337485
Alignment:
| Q |
232 |
gttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatg |
331 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||||| ||||| || || |||||||| |||||||||||||||||| |
|
|
| T |
27337630 |
gttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatg |
27337531 |
T |
|
| Q |
332 |
ggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
| | |||||||||| |||||||||||||||| |||||| ||||| |
|
|
| T |
27337530 |
gtactagaggcttgggaaaatcaacacttgcaaaagcaatttataa |
27337485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 377
Target Start/End: Complemental strand, 27398370 - 27398225
Alignment:
| Q |
232 |
gttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatg |
331 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||| |||||||||| ||||||||||||||| ||||| || || |||||||| |||||||||||||||||| |
|
|
| T |
27398370 |
gttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggactttatg |
27398271 |
T |
|
| Q |
332 |
ggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
| | |||||||||| |||||||||||||||| |||||| ||||| |
|
|
| T |
27398270 |
gtactagaggcttgggaaaatcaacacttgcaaaagcaatttataa |
27398225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 377
Target Start/End: Complemental strand, 25492876 - 25492709
Alignment:
| Q |
210 |
gatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggg |
309 |
Q |
| |
|
|||||||||||| | ||| |||||||||| |||||||||||||| | | ||| ||||||| |||||||||||||| ||| ||| | || | | | | |
|
|
| T |
25492876 |
gatcaatcgtgtttcattacatgttgccaaataccctgttggattacaatcccgagtacaacacgtgaaattgcttctagatgaggtatctgaggatgag |
25492777 |
T |
|
| Q |
310 |
gtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||||||||||||||||| | |||||||||| |
|
|
| T |
25492776 |
ttccacatggtaggactttatggtactggaggcttaggtaaatcaacacttgcaaaatcaatctataa |
25492709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 98 - 369
Target Start/End: Original strand, 25580235 - 25580506
Alignment:
| Q |
98 |
tcaatacatgaatgtgattgtcatgttgttgtttggactaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaata |
197 |
Q |
| |
|
|||||||||| |||||||| | || || ||| || ||||| ||||| ||| ||| ||| ||||||||||| | ||||||| | |||||| || | |
|
|
| T |
25580235 |
tcaatacatggatgtgattttgattttagtgtatgttctaacttatcttattggacacgaatagatatgaatacaagtttattgagaagatagtcgaaga |
25580334 |
T |
|
| Q |
198 |
catctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaa |
297 |
Q |
| |
|
|||||||||||| ||||||| ||| ||| | || ||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || |
|
|
| T |
25580335 |
catctccaacaatatcaatcatgtttttttaaacgtagccaaataccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggc |
25580434 |
T |
|
| Q |
298 |
actaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagca |
369 |
Q |
| |
|
|| | | | |||||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||| |
|
|
| T |
25580435 |
tctgaggatgtggtccacatggtaggactttatggtactggaggcatgggtaaatcaacacttgcaaaagca |
25580506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 370
Target Start/End: Original strand, 26824437 - 26824604
Alignment:
| Q |
203 |
ccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaa |
302 |
Q |
| |
|
||||| ||||||||||||| ||| |||||||||| ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||| ||| || | |
|
|
| T |
26824437 |
ccaaccagatcaatcgtgttagtttacatgttgccaaatacccggttggattacagtcccgagtacaacaagtgaaatctcttcttgataacgaatctga |
26824536 |
T |
|
| Q |
303 |
taaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaa |
370 |
Q |
| |
|
| | | |||||| |||||||||||||| || || ||||| || ||||||||||||||||||| ||||| |
|
|
| T |
26824537 |
tgatgtggtccatatggtaggactttacggtattggaggtttaggtaaatcaacacttgcaaaagcaa |
26824604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 135 - 369
Target Start/End: Original strand, 25539093 - 25539327
Alignment:
| Q |
135 |
ctaacatatctagttgaacatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgtt |
234 |
Q |
| |
|
||||| ||||| ||| ||||||| ||||||||||| | ||||||| | |||||| || ||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
25539093 |
ctaacttatcttattggacatgaatagatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttatatgtg |
25539192 |
T |
|
| Q |
235 |
gccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatggga |
334 |
Q |
| |
|
||||| |||||||||||||| ||| | |||| |||||||||||||||||||||| || || | | | ||||| |||||||||||||||||| | |
|
|
| T |
25539193 |
gccaaataccctgttggattacagtccccaatagaacaagtgaaattgcttcttgacttgggctctgaggatgaggtccgcatggtaggactttatggta |
25539292 |
T |
|
| Q |
335 |
taggaggcttgggtaaatcaacacttgcaagagca |
369 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| |
|
|
| T |
25539293 |
ctggaggcatgggtaaatcaacacttgcaaaagca |
25539327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 27215131 - 27215238
Alignment:
| Q |
264 |
aatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgca |
363 |
Q |
| |
|
|||||||||||| |||||||||||||| |||| | |||| ||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||| |
|
|
| T |
27215131 |
aatacaacaagtaaaattgcttcttgacaagggatctaaggaagaggtccacatggtaggacttcatggagctggaggcatgggtaaatcaacacttgca |
27215230 |
T |
|
| Q |
364 |
agagcaat |
371 |
Q |
| |
|
| |||||| |
|
|
| T |
27215231 |
aaagcaat |
27215238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 369
Target Start/End: Original strand, 26143435 - 26143652
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||| | |||||| || ||||||||||||| ||||||| ||| ||| |||| ||||| ||||||||||| |
|
|
| T |
26143435 |
acatgaatagatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttaaatgtagccaaataccctgttgg |
26143534 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||||| || ||||||||||||||||||| | || || | | | ||||| |||||||||||||| ||| | |||||| |||||||| |
|
|
| T |
26143535 |
attacagtcccgaatagaagaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggaggcatgggtaaa |
26143634 |
T |
|
| Q |
352 |
tcaacacttgcaagagca |
369 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
26143635 |
tcaacacttgcaaaagca |
26143652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 369
Target Start/End: Original strand, 26056535 - 26056706
Alignment:
| Q |
198 |
catctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaa |
297 |
Q |
| |
|
|||||||||||||||||||| ||| ||| | || ||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || |
|
|
| T |
26056535 |
catctccaacaagatcaatcatgtttttttaaacgtagccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggc |
26056634 |
T |
|
| Q |
298 |
actaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagca |
369 |
Q |
| |
|
|| | || | ||||| |||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||| |
|
|
| T |
26056635 |
tctgagaatgaggtccgcatggtaggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagca |
26056706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 369
Target Start/End: Original strand, 26076505 - 26076676
Alignment:
| Q |
198 |
catctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaa |
297 |
Q |
| |
|
|||||||||||||||||||| ||| ||| | || ||||| |||||||||||||| ||| |||||| |||||||||||||||||||||| | || |
|
|
| T |
26076505 |
catctccaacaagatcaatcatgtttttttaaacgtagccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggc |
26076604 |
T |
|
| Q |
298 |
actaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagca |
369 |
Q |
| |
|
|| | || | ||||| |||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||| |
|
|
| T |
26076605 |
tctgagaatgaggtccgcatggtaggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagca |
26076676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 369
Target Start/End: Original strand, 25483661 - 25483843
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttc |
286 |
Q |
| |
|
|||||| |||||||||||||||| ||||||| || ||| | || ||||| |||||||||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
25483661 |
atagtccaatacatctccaacaatatcaatcatgattttttaaacgtagccaaataccctgttggattacagtcccgaatagaacaagtgaaattgcttc |
25483760 |
T |
|
| Q |
287 |
ttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagca |
369 |
Q |
| |
|
|||| | || || | | | ||||| |||||||||||||| ||| | |||||| ||||||||||||||||||||| |||| |
|
|
| T |
25483761 |
ttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggaggcatgggtaaatcaacacttgcaaaagca |
25483843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 28297346 - 28297256
Alignment:
| Q |
161 |
gatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||||| | |||| ||||||||||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
28297346 |
gatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaatcgtgttcctttatatgttgccgattaccccgttgg |
28297256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 28514727 - 28514817
Alignment:
| Q |
161 |
gatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||||| | |||| ||||||||||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
28514727 |
gatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaatcgtgttcctttatatgttgccgattaccccgttgg |
28514817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 28181693 - 28181775
Alignment:
| Q |
161 |
gatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattac |
243 |
Q |
| |
|
||||||||||||| ||||| | | | |||||||||||| | ||||| ||||||||| |||| || |||||||||||| ||||| |
|
|
| T |
28181693 |
gatatgaatatgagtttatcgaaaagatagtcaaatacgtttccaaaaagatcaattgtgttcctttatatgttgccgattac |
28181775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 25511540 - 25511640
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttc |
286 |
Q |
| |
|
|||||| || ||||||||||||||||||||| ||| || | || ||||| |||||||||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
25511540 |
atagtcgaagacatctccaacaagatcaatcatgtttttttgaacgtagccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttc |
25511639 |
T |
|
| Q |
287 |
t |
287 |
Q |
| |
|
| |
|
|
| T |
25511640 |
t |
25511640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 28227554 - 28227618
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||| || || ||||||||||||| ||| || ||| |||||||| ||||||||||||| |
|
|
| T |
28227554 |
atagtcaaatatatatctaacaagatcaatcatgttcctttacatgttgccgattaccctgttgg |
28227618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 28235167 - 28235231
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||| | || ||||||||||||| ||| || |||||||||||| ||||||||||||| |
|
|
| T |
28235167 |
atagtcaaatatgtatcaaacaagatcaatcatgttcctttatatgttgccgattaccctgttgg |
28235231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 126; Significance: 7e-65; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 267955 - 267730
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
267955 |
acatgaatagatatgaatacaagtttattggagagatagtcaaatacatctccaacaagatcagtcgtgagcccttacatgttgccaattaccctgttgg |
267856 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| || || | |||||||||||||||||||||||||||| | | || || | |||||||| ||||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
267855 |
attatggtctcaagtacaacaagtgaaattgcttcttgataatggatctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaa |
267756 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
267755 |
tcaacccttgcaagagcaatctataa |
267730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 377
Target Start/End: Complemental strand, 28127251 - 28127065
Alignment:
| Q |
191 |
tcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttga |
290 |
Q |
| |
|
||||| |||| ||| ||| |||||||||||| |||| |||||||||| || ||||||||||| || | | ||||||||||||| |||||||| || |
|
|
| T |
28127251 |
tcaaagacatatccgacaggatcaatcgtgttttcttacatgttgccaaatatcctgttggattacaggaccaagtacaacaagtgaatttgcttctcga |
28127152 |
T |
|
| Q |
291 |
taaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||| | | || | | |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
28127151 |
taagggatatgatgatgaggtccacatggtaggactttatggtattggaggcttgggtaaatcaacacttgcaaaagcaatttataa |
28127065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 377
Target Start/End: Complemental strand, 28163941 - 28163765
Alignment:
| Q |
201 |
ctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaact |
300 |
Q |
| |
|
|||| ||| |||||||||||| ||| ||||||| || || ||||||||||| | | || | |||||||||||||||||||||| ||||||| | | |
|
|
| T |
28163941 |
ctccgacaggatcaatcgtgtttttttacatgttgcaaaatatcctgttggattacaatctcaagtacaacaagtgaaattgcttctcgataagggatat |
28163842 |
T |
|
| Q |
301 |
aataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|| | | ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
28163841 |
gatgatgaggtccacatggtaggactttatgatactggaggcttgggtaaatcaacacttgcaaaagcaatttataa |
28163765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 8054 - 8279
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | |||||||| || |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
8054 |
acatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg |
8153 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||| ||||||| |||||||||| | | | || || | || ||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
8154 |
attacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaaa |
8253 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||| || |||||| ||||| |
|
|
| T |
8254 |
tcaacacttggaaaagcaatttataa |
8279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 3154 - 2929
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||| |
|
|
| T |
3154 |
acatgaatagatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgttgg |
3055 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
| | |||| |||| ||||||||||||||| |||||||||| | | || || | || ||||||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
3054 |
aatgaagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggtaaa |
2955 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||||| |||||| ||||| |
|
|
| T |
2954 |
tcaacacttgcaaaagcaatttataa |
2929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 13290 - 13065
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | |||||||| || |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
13290 |
acatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg |
13191 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||| ||||||| |||||||||| | | | || || | || ||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
13190 |
attacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaaa |
13091 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||| || |||||| ||||| |
|
|
| T |
13090 |
tcaacacttggaaaagcaatttataa |
13065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 377
Target Start/End: Complemental strand, 4319 - 4102
Alignment:
| Q |
160 |
agatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttggatttaagt |
259 |
Q |
| |
|
||||||||||| | ||||||||||| |||||||| |||||||||||||||||| || | ||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
4319 |
agatatgaatacaagtttattggagagatagtcaagaacatctccaacaagatcagtcatcagcccttacatgttgccaattaccctgttggattacagt |
4220 |
T |
|
| Q |
260 |
ttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaatcaacact |
359 |
Q |
| |
|
|||| ||||||| ||||||| |||||||||| | | | || || | || | ||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
4219 |
ctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatcatggagcccacatggtaggactttatggtactggaggcttgggtaaatcaacact |
4120 |
T |
|
| Q |
360 |
tgcaagagcaatctataa |
377 |
Q |
| |
|
|| || |||||| ||||| |
|
|
| T |
4119 |
tggaaaagcaatttataa |
4102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 60136 - 60361
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| || |||||||| | |||||||||||||||||||||||||||| ||| | ||||| ||||||||| |||||||||||| |
|
|
| T |
60136 |
acatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccctgttgg |
60235 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
60236 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaa |
60335 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
60336 |
tcaacacttgcaagagcaatctataa |
60361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 6e-53; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 152 - 377
Target Start/End: Original strand, 18074328 - 18074553
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| || |||||||| | |||||||||||||||||||||||||||| ||| | ||||| ||||||||| |||||||||||| |
|
|
| T |
18074328 |
acatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccctgttgg |
18074427 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| ||| | || || | |||||||| ||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
18074428 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcaggtaaa |
18074527 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
18074528 |
tcaacacttgcaagagcaatctataa |
18074553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 18699011 - 18698786
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||| |
|
|
| T |
18699011 |
acatgaatagatatgaatacaagtttattggagatatagtcaaatacgtctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg |
18698912 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| |||||||||||||| |||||||||||| | | || || | || |||| |||| ||||||||||||| || |||||| |||||||| |
|
|
| T |
18698911 |
attgcagtctcgagtacaacaagtgaaagcgcttcttgataaaggatctgatgatggagtccgcatgttaggactttatggcattggaggcatgggtaaa |
18698812 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||| | |||||| ||||| |
|
|
| T |
18698811 |
tcaacacttgcgaaagcaatttataa |
18698786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 18679171 - 18678946
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||| |||||||||||| |||| |||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
18679171 |
acatgaatagatatgaatacaagtttattggagagatagtcaaatacgtctctaacaagatcagtcggcagcccttacatgttgccaattaccctgttgg |
18679072 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| |||| ||||||||||||||| |||||||||| | | || || | || |||| |||||||||||||||||| || |||||| |||||||| |
|
|
| T |
18679071 |
attgcagtctcgagtacaacaagtgaaatcgcttcttgatgaatgatcttatgatggagtccgcatggtaggactttatggcattggaggcatgggtaaa |
18678972 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
| ||||||||||| |||||| ||||| |
|
|
| T |
18678971 |
ttaacacttgcaaaagcaatttataa |
18678946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 18723696 - 18723471
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||| | ||||||||||| || ||||||||||| |||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
18723696 |
acatgaatagatatgaatacaagtttattggaaagatagtcaaatatgtcaacaacaagatcagtcgtcagcccttacatgttgccacttaccctgttgg |
18723597 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
|| ||| |||| ||||||||||||||| |||||||||||| | | ||||| || |||| |||| ||||||||||||| || |||||| |||| ||| |
|
|
| T |
18723596 |
gttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctaatggtggagtccgcatgataggactttatggtattggaggcatgggaaaa |
18723497 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||||||||||| || ||| ||||| |
|
|
| T |
18723496 |
tcaacacttgcaaaaggaatttataa |
18723471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 152 - 364
Target Start/End: Complemental strand, 18655088 - 18654876
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||||| | ||||||||||| ||||||||||||||| |||| ||||||| ||| ||||| |||||||||||| |
|
|
| T |
18655088 |
acatgaatagatatgaatacaagtttattggaaagatagtcaaatatgtctccaacaagatcagtcgtcagcccttacatgctgccagttaccctgttgg |
18654989 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
|| ||| |||| ||||||||||||||| |||||||||||| | | || || || |||| |||| ||||||||||||| || |||||| |||| ||| |
|
|
| T |
18654988 |
gttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctgatggtggagtccgcatgataggactttatggtattggaggcatgggaaaa |
18654889 |
T |
|
| Q |
352 |
tcaacacttgcaa |
364 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18654888 |
tcaacacttgcaa |
18654876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 152 - 362
Target Start/End: Complemental strand, 18731115 - 18730905
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||||| | | ||||||||||| ||||||||||||||| |||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
18731115 |
acatgaatagatatgaatacaagtttattgaaaagatagtcaaatatgtctccaacaagatcagtcgtcagcccttacatgttgccatttaccctgttgg |
18731016 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
|| ||| |||| ||||||||||||||| |||||||||||| | | || || || |||| |||| ||||||||||||| || |||||| |||| ||| |
|
|
| T |
18731015 |
gttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatcttatggtggagtccgcatgataggactttatggtattggaggcatgggaaaa |
18730916 |
T |
|
| Q |
352 |
tcaacacttgc |
362 |
Q |
| |
|
||||||||||| |
|
|
| T |
18730915 |
tcaacacttgc |
18730905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 152 - 377
Target Start/End: Complemental strand, 29273453 - 29273228
Alignment:
| Q |
152 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||| ||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||| ||||||||||| |
|
|
| T |
29273453 |
acatgaatagatatgaatacaagtttatcggagagatagtcaaatacatctccaacaagatcagccgcgtgcccttacatgttgccaaataccctgttgg |
29273354 |
T |
|
| Q |
252 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtccacatggtaggactttatgggataggaggcttgggtaaa |
351 |
Q |
| |
|
||| ||| || | |||||||||| |||| |||||||||||| | | || || | ||| |||| ||||| ||| |||||||||| || |||||||||||| |
|
|
| T |
29273353 |
attacagtctcaagtacaacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatggttggaatttatgggattggtggcttgggtaaa |
29273254 |
T |
|
| Q |
352 |
tcaacacttgcaagagcaatctataa |
377 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
29273253 |
tcaacccttgcaagagcaatctataa |
29273228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 28052 - 28116
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||| || || ||||||||||||| ||| || ||| |||||||| ||||||||||||| |
|
|
| T |
28052 |
atagtcaaatatatatctaacaagatcaatcatgttcctttacatgttgccgattaccctgttgg |
28116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 35329 - 35393
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||| | || ||||||||||||| ||| || |||||||||||| ||||||||||||| |
|
|
| T |
35329 |
atagtcaaatatgtatcaaacaagatcaatcatgttcctttatatgttgccgattaccctgttgg |
35393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 57874 - 57810
Alignment:
| Q |
187 |
atagtcaaatacatctccaacaagatcaatcgtgtgcccttatatgttgccaattaccctgttgg |
251 |
Q |
| |
|
||||||||||| | || ||||||||||||| ||| || |||||||||||| ||||||||||||| |
|
|
| T |
57874 |
atagtcaaatatgtatctaacaagatcaatcatgttcctttatatgttgccgattaccctgttgg |
57810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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