View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2640-Insertion-24 (Length: 358)
Name: NF2640-Insertion-24
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640-Insertion-24 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 7 - 358
Target Start/End: Original strand, 31272910 - 31273262
Alignment:
| Q |
7 |
aaatgtgtctccgaacaaaactcaaaattaaaacatactgtaatattacctccgtatctgtatacaaaggagtttgtaaatctttgttgtcttcgtctct |
106 |
Q |
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| T |
31272910 |
aaatgtgtcttcgaataaaaccaaaaattaaaacatactgtaatattacctccgtatctgtatacaaaggagtttgtaaatcttttttgccttcgtctct |
31273009 |
T |
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| Q |
107 |
tccatctagtcctttaaatcgacactatgtaacaaagctatgaaaagaagggg-atgaaatccttgagagtgtaacggtggttttgcattctatttaagg |
205 |
Q |
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| T |
31273010 |
tccatctagtcctttaaatcgacactatgtaacaaagctatgaaaagaagggggatgaaatccttgagagtgtaacggtggttttgcattctatttaagg |
31273109 |
T |
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| Q |
206 |
gaaataacagcagtgttgattttgagtcaatgttttgtgcctgaaaagcatgttagcatcatttagaggtgtatatatatagaaagctttggcggtcgtt |
305 |
Q |
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| T |
31273110 |
gaaataacagcagtgttgattttgagtcaatgttttgtgcctgaaaagcatgttagcatcatttagaggtgtatatatatagaaagctttggcggtcgtt |
31273209 |
T |
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| Q |
306 |
gctcacaaaaatacaatgcctacacttgtttgagtttgccacatggacattta |
358 |
Q |
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| T |
31273210 |
gctcacaaaaatacaatgcctacacttgtttgagtttgccacatggacattta |
31273262 |
T |
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