View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2640-Insertion-29 (Length: 263)
Name: NF2640-Insertion-29
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640-Insertion-29 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 30747301 - 30747072
Alignment:
| Q |
8 |
gataagatccacaatggtttaaccaaaaaccttggaggatattttctacctcgcacacaagtatgaatttgtaaattctgctgtcctcaaaaactagtga |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30747301 |
gataagatccacaatggtttaaccaaaaaccttggaggatattttctacctcacacacaagtatgaatttgtaaattctgttgtcctcaaaaactagtga |
30747202 |
T |
|
| Q |
108 |
ccatagaagctatgtttaaagagaataaattgtcgacaactaaaatataaaaaagctacgttttaagaattttattacacttccattaagaattccaatc |
207 |
Q |
| |
|
||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30747201 |
ccataaaggctatgtttaaagagaataaatcgtcgacaactaaaatataaaaaagctacgttttaagaattttattacacttccattaagaattccaatc |
30747102 |
T |
|
| Q |
208 |
agaaacaaacaatatttggaataatttgtc |
237 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
30747101 |
agaaacaaacaatatttggaataatttgtc |
30747072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University