View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2640-Insertion-4 (Length: 716)

Name: NF2640-Insertion-4
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2640-Insertion-4
NF2640-Insertion-4
[»] chr4 (22 HSPs)
chr4 (9-716)||(26977429-26978133)
chr4 (9-468)||(26989752-26990221)
chr4 (9-464)||(27004312-27004769)
chr4 (373-460)||(26944758-26944845)
chr4 (373-462)||(26952525-26952614)
chr4 (569-611)||(22231345-22231387)
chr4 (32-105)||(26952902-26952975)
chr4 (569-608)||(37836088-37836127)
chr4 (534-572)||(26942869-26942907)
chr4 (569-606)||(5846389-5846426)
chr4 (569-606)||(9685642-9685679)
chr4 (569-606)||(17222689-17222726)
chr4 (569-606)||(17905166-17905203)
chr4 (569-606)||(21498364-21498401)
chr4 (569-606)||(21498805-21498842)
chr4 (569-606)||(22827548-22827585)
chr4 (569-606)||(27634553-27634590)
chr4 (569-606)||(28245563-28245600)
chr4 (569-606)||(28246122-28246159)
chr4 (569-606)||(31254444-31254481)
chr4 (569-606)||(35788669-35788706)
chr4 (569-606)||(35796779-35796816)
[»] chr8 (20 HSPs)
chr8 (569-614)||(6559486-6559531)
chr8 (569-606)||(11232231-11232268)
chr8 (569-606)||(11232466-11232503)
chr8 (569-606)||(37868385-37868422)
chr8 (532-570)||(6908471-6908509)
chr8 (569-599)||(20094831-20094861)
chr8 (569-611)||(45031398-45031440)
chr8 (569-606)||(4828303-4828340)
chr8 (569-606)||(5931986-5932023)
chr8 (569-606)||(7729951-7729988)
chr8 (569-606)||(17469828-17469865)
chr8 (569-606)||(17477075-17477112)
chr8 (569-606)||(19256623-19256660)
chr8 (569-606)||(24075343-24075380)
chr8 (569-606)||(30966104-30966141)
chr8 (569-606)||(37867869-37867906)
chr8 (569-606)||(37868109-37868146)
chr8 (569-606)||(38447464-38447501)
chr8 (569-606)||(38475757-38475794)
chr8 (569-606)||(39052966-39053003)
[»] chr1 (10 HSPs)
chr1 (568-606)||(25460730-25460768)
chr1 (571-608)||(25145759-25145796)
chr1 (569-608)||(17452716-17452755)
chr1 (569-611)||(41035864-41035906)
chr1 (569-606)||(2859664-2859701)
chr1 (569-606)||(4113043-4113080)
chr1 (569-606)||(7465682-7465719)
chr1 (569-606)||(12244999-12245036)
chr1 (569-606)||(25145522-25145559)
chr1 (569-606)||(40079162-40079199)
[»] scaffold0519 (2 HSPs)
scaffold0519 (569-606)||(1926-1963)
scaffold0519 (569-606)||(2161-2198)
[»] chr7 (16 HSPs)
chr7 (569-606)||(1596838-1596875)
chr7 (569-606)||(29469615-29469652)
chr7 (569-606)||(29469850-29469887)
chr7 (569-600)||(1596610-1596641)
chr7 (569-611)||(4886334-4886376)
chr7 (569-611)||(21054990-21055032)
chr7 (572-606)||(21861539-21861573)
chr7 (569-606)||(1793756-1793793)
chr7 (569-606)||(10882042-10882079)
chr7 (569-606)||(21861304-21861341)
chr7 (569-606)||(25620146-25620183)
chr7 (569-606)||(31485696-31485733)
chr7 (569-606)||(34027403-34027440)
chr7 (465-557)||(43790876-43790969)
chr7 (569-606)||(48243098-48243135)
chr7 (569-606)||(48243474-48243511)
[»] chr6 (14 HSPs)
chr6 (569-606)||(13353211-13353248)
chr6 (569-606)||(33796336-33796373)
chr6 (534-570)||(18286667-18286703)
chr6 (569-600)||(6623447-6623478)
chr6 (569-608)||(17147697-17147736)
chr6 (569-608)||(28867994-28868033)
chr6 (569-611)||(24554122-24554164)
chr6 (569-611)||(33494544-33494586)
chr6 (569-606)||(4868614-4868651)
chr6 (569-606)||(4868850-4868887)
chr6 (569-606)||(8026399-8026436)
chr6 (569-606)||(9705264-9705301)
chr6 (569-606)||(19712724-19712761)
chr6 (569-606)||(27772724-27772761)
[»] chr5 (9 HSPs)
chr5 (569-606)||(6919231-6919268)
chr5 (569-606)||(19522097-19522134)
chr5 (570-608)||(21306895-21306933)
chr5 (570-608)||(21314733-21314771)
chr5 (569-606)||(60097-60134)
chr5 (569-606)||(19705913-19705950)
chr5 (569-606)||(24528550-24528587)
chr5 (569-606)||(41666794-41666831)
chr5 (569-606)||(41667030-41667067)
[»] chr3 (17 HSPs)
chr3 (569-608)||(20327651-20327690)
chr3 (534-569)||(30332522-30332557)
chr3 (569-606)||(1723113-1723150)
chr3 (569-606)||(11589795-11589832)
chr3 (569-606)||(20327886-20327923)
chr3 (569-606)||(23691229-23691266)
chr3 (569-606)||(23708029-23708066)
chr3 (569-606)||(23708261-23708298)
chr3 (569-606)||(23726485-23726522)
chr3 (569-606)||(23726717-23726754)
chr3 (569-606)||(23744941-23744978)
chr3 (569-606)||(23745173-23745210)
chr3 (569-606)||(24063466-24063503)
chr3 (569-606)||(24063698-24063735)
chr3 (569-606)||(39269341-39269378)
chr3 (569-606)||(45138839-45138876)
chr3 (569-606)||(54368526-54368563)
[»] chr2 (14 HSPs)
chr2 (569-611)||(35418451-35418493)
chr2 (569-606)||(93160-93197)
chr2 (569-606)||(2324250-2324287)
chr2 (569-606)||(2324484-2324521)
chr2 (569-606)||(5711476-5711513)
chr2 (569-606)||(14466447-14466484)
chr2 (569-606)||(16419512-16419549)
chr2 (569-606)||(17525375-17525412)
chr2 (569-606)||(17719410-17719447)
chr2 (569-606)||(28407830-28407867)
chr2 (569-606)||(32884117-32884154)
chr2 (534-567)||(36901328-36901361)
chr2 (569-606)||(40379246-40379283)
chr2 (569-606)||(40379481-40379518)
[»] scaffold0334 (1 HSPs)
scaffold0334 (569-606)||(4466-4503)


Alignment Details
Target: chr4 (Bit Score: 674; Significance: 0; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 674; E-Value: 0
Query Start/End: Original strand, 9 - 716
Target Start/End: Original strand, 26977429 - 26978133
Alignment:
Q  9 ccatgactgatgaattgttcaatttatgccttttgcagcttttactggaccggcaaatgtacatttagtacctgcagctaatacttatgtccaggtattt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26977429 ccatgactgatgaattgttcaatttatgccttttgcagcttttactggaccggcaaatgtacatttagtacctgcagctaatacttatgtccaggtattt 26977528  T
Q  109 ttcttctgattactatccttcaattcaaattaagattgtaattaatgtttttaaaattctagaaatcataaaacaatttatggcgagaaatgagcagtct 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26977529 ttcttctgattactatccttcaattcaaattaagattgtaattaatgtttttaaaattctagaaatcatgaaacaatttatggcgagaaatgagcagtct 26977628  T
Q  209 catttttcatttcttttaatagtaaatataaaggtttgtatggcaacatttcttttaataaagaatacaacctttcaaataagattctgcttccgtttct 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26977629 catttttcatttcttttaatagtaaatataaaggtttgtatggcaacatttcttttaataaagaatacaacctttcaaataagattctgcttccgtttct 26977728  T
Q  309 tcattgaaattgatcaagggaagctatcgacctctacttgatttagtcacactgaattaatttcttttggtgttagattcgaggattggcatggccttct 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26977729 tcattgaaattgatcaagggaagctatcgacctctacttgatttagtcacactgaattaatttcttttggtgttagattcgaggattggcatggccttct 26977828  T
Q  409 ttacttgttggattggttgctcagagtgcaaggtgcaaatatactatttatttctcgtgtgttaagagttccaccttggatgagtatggcctgaacatat 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  26977829 ttacttgttggattggttgctcagagtgcaaggtgcaaatatactat---tttcttgcgtgttaagagttccaccttggatgagtatggcctgaacatat 26977925  T
Q  509 gtttataagtaggggaggtccttgtcttacaagccaattttgtaaggatgagtttggcccaaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26977926 gtttataagtaggggaggtccttgtcttacaagccaattttgtaaggatgagtttggcccaaccggcttgtaaggtgaggattgcccccactaataaata 26978025  T
Q  609 tatcttggtcatatctcatcgaatataggactctcaaccgtgttacttaataaaatttgaaatttgcaaaatttatgtcaaatcttatatactgtgttac 708  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26978026 tatcttggtcatatctcatccaatataggactctcaaccgtgttacttaataaaatttgaaatttgcaaaatttatgtcaaatcttatatactgttttac 26978125  T
Q  709 acatctgg 716  Q
    ||||||||    
T  26978126 acatctgg 26978133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 468
Target Start/End: Complemental strand, 26990221 - 26989752
Alignment:
Q  9 ccatgactgatgaattgttcaatttatgccttttgcagcttttactggaccggcaaatgtacatttagtacctgcagctaatacttatgtccaggtattt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||    
T  26990221 ccatgactgatgaattgttcaatttatgccttttgcagcttttactggaccgaagaatgtacatttagtacctgcagctaatacttatgtccaggttttt 26990122  T
Q  109 ttc-----ttctgattactatccttcaattcaaattaagattgtaattaatgtttt-taaaattctagaaatcataaaacaatttatggcgagaaatgag 202  Q
    |||     |||||||||||||||||||||  ||||||||||| |||||||||||||  ||||||| ||||||||||||| || |||||||||||||||||    
T  26990121 ttctttctttctgattactatccttcaatctaaattaagattataattaatgttttcaaaaattcaagaaatcataaaataa-ttatggcgagaaatgag 26990023  T
Q  203 cagtctcatttttcatttcttttaatagtaaatataaaggtttgtatggcaacatttcttttaataaagaatacaacctttcaaataagattctgcttcc 302  Q
     | | ||||| ||||||| || | |||||||  ||||||||||||||| |||   |||||| ||||||| | ||||||||||| ||| ||||||||||      
T  26990022 taatttcattgttcatttattgttatagtaa--ataaaggtttgtatgccaatgcttctttaaataaagtagacaacctttcagataggattctgctttt 26989925  T
Q  303 gtttctt-----------cattgaaattgatcaagggaagctatcgacctctacttgatttagtcacactgaattaatttcttttggtgttagattcgag 391  Q
    |||||||            ||||||||||||||| ||||| ||||  ||||  ||||||||||| | ||||    |||||||| ||||||||||||||||    
T  26989924 gtttcttaattatttacatattgaaattgatcaaaggaaggtatcatcctccgcttgatttagtaatactg----aatttcttatggtgttagattcgag 26989829  T
Q  392 gattggcatggccttctttacttgttggattggttgctcagagtgcaaggtgcaaatatactatttatttctcgtgt 468  Q
    | ||||||||||||| ||||||| |||||| | ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  26989828 ggttggcatggccttgtttacttattggatcgattgctcaaagtgcaaggtgcaaacatactatctatttctcgtgt 26989752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 9 - 464
Target Start/End: Complemental strand, 27004769 - 27004312
Alignment:
Q  9 ccatgactgatgaattgttcaatttatg--ccttttgcagcttttactggaccggcaaatgtacatttagtacctgcagctaatacttatgtccaggtat 106  Q
    ||||||| |||||||||||| |||| |   |||||| ||||||||||||||||    ||||||||| |||||||||||||||||| |||||||||||| |    
T  27004769 ccatgacagatgaattgttctatttttttacctttttcagcttttactggaccaaagaatgtacatctagtacctgcagctaatagttatgtccaggttt 27004670  T
Q  107 ttttcttctgattactatccttcaattcaaattaagattgtaattaatgttttt-aaaattctagaaatcataaaacaatttatggcgagaaatgagcag 205  Q
    ||||  |||||||||||||||||||||    ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |     
T  27004669 tttt--tctgattactatccttcaatt----ttaagattgtaattaatgtttttcaaaattcaagaaatcatacaacaatttatggcgagaaatgagtaa 27004576  T
Q  206 tctcatttttcatttcttttaatagtaaatataaaggtttgtatggcaacatttcttttaataaagaatacaacctttcaaataagattctgcttccgtt 305  Q
      |||  ||||||||||| |||| |||||||  ||||||||||||||||    ||||| ||||||| ||||||||||||||||| ||||||||||  |||    
T  27004575 cttcaactttcatttcttgtaattgtaaata--aaggtttgtatggcaatgcctctttaaataaagtatacaacctttcaaataggattctgcttttgtt 27004478  T
Q  306 tcttcatt-----------gaaattgatcaagggaagctatcgacctctacttgatttagtcacactgaattaatttcttttggtgttagattcgaggat 394  Q
    ||||||||           || ||||||||| ||||| ||||  ||||| ||| ||||||| ||||||     |||||||||||| |||||||||||| |    
T  27004477 tcttcattatttacataccgagattgatcaaaggaaggtatcatcctctgcttaatttagtaacactg----gatttcttttggtattagattcgagggt 27004382  T
Q  395 tggcatggccttctttacttgttggattggttgctcagagtgcaaggtgcaaatatactatttatttctc 464  Q
    |||||||||||| |||||||||||| | | | || || ||||||||||||||| ||||||||||||||||    
T  27004381 tggcatggccttgtttacttgttgggtcgatcgcccaaagtgcaaggtgcaaacatactatttatttctc 27004312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 460
Target Start/End: Complemental strand, 26944845 - 26944758
Alignment:
Q  373 ttttggtgttagattcgaggattggcatggccttctttacttgttggattggttgctcagagtgcaaggtgcaaatatactatttatt 460  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| || ||||||||||||||||||| |||||||||||    
T  26944845 ttttgttgttagattcgaggattggcgtggcctgctttacttgttggatgggtcgcacagagtgcaaggtgcaaatttactatttatt 26944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 26952614 - 26952525
Alignment:
Q  373 ttttggtgttagattcgaggattggcatggccttctttacttgttggattggttgctcagagtgcaaggtgcaaatatactatttatttc 462  Q
    |||||||||||||||||||  ||| | |||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  26952614 ttttggtgttagattcgagccttgtcgtggcctgctttactcgttggatgggttgctcagagtgcaaggtgcaaatatgctatttatttc 26952525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 22231345 - 22231387
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  22231345 aaccggcttgtgaggtgaggattgcccccacttataaatatat 22231387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 26952975 - 26952902
Alignment:
Q  32 ttatgccttttgcagcttttactggaccggcaaatgtacatttagtacctgcagctaatacttatgtccaggta 105  Q
    ||||||||||| ||||||| ||||| ||    |||| |||| ||||||||||||||||||||||||| ||||||    
T  26952975 ttatgcctttttcagctttcactgggccaaagaatgcacatgtagtacctgcagctaatacttatgtgcaggta 26952902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Complemental strand, 37836127 - 37836088
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  37836127 aaccggcttgtaaggagaggattgcccccacttataaata 37836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 572
Target Start/End: Complemental strand, 26942907 - 26942869
Alignment:
Q  534 cttacaagccaattttgtaaggatgagtttggcccaacc 572  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  26942907 cttacaagccgattttgtaaggatgagttaggcccaacc 26942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 5846426 - 5846389
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  5846426 aaccggcttgtgaggtgaggattgcccccacttataaa 5846389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 9685679 - 9685642
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  9685679 aaccggcttgtgaggtgaggattgcccccacttataaa 9685642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 17222689 - 17222726
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  17222689 aaccggcttgtgaggtgaggattgcccccacttataaa 17222726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 17905203 - 17905166
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  17905203 aaccggcttgtaaggtgaggattacccccacttataaa 17905166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 21498401 - 21498364
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  21498401 aaccggcttgtgaggtgaggattgcccccacttataaa 21498364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 21498842 - 21498805
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  21498842 aaccggcttgtgaggtgaggattgcccccacttataaa 21498805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 22827585 - 22827548
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  22827585 aaccggcttgtgaggtgaggattgcccccacttataaa 22827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 27634553 - 27634590
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  27634553 aaccggcttgtgaggtgaggattgcccccactcataaa 27634590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 28245563 - 28245600
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  28245563 aaccggcttgtgaggtgaggattgcccccacttataaa 28245600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 28246122 - 28246159
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  28246122 aaccggcttgtgaggtgaggattgcccccacttataaa 28246159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 31254444 - 31254481
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  31254444 aaccggtttgtaaggtgaggattgcccccacttataaa 31254481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 35788706 - 35788669
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  35788706 aaccggcttgtgaggtgaggattgcccccacttataaa 35788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 35796779 - 35796816
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  35796779 aaccggcttgtgaggtgaggattgcccccacttataaa 35796816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 614
Target Start/End: Original strand, 6559486 - 6559531
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatatctt 614  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  6559486 aaccggcttgtaaggtgaggattgcccccacttataaacatatctt 6559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 11232231 - 11232268
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11232231 aaccggcttgtaaggtgaggattgcccccacttataaa 11232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 11232466 - 11232503
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11232466 aaccggcttgtaaggtgaggattgcccccacttataaa 11232503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 37868385 - 37868422
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  37868385 aaccggcttgtgaggtgaggattgcccccactaataaa 37868422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 570
Target Start/End: Original strand, 6908471 - 6908509
Alignment:
Q  532 gtcttacaagccaattttgtaaggatgagtttggcccaa 570  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  6908471 gtcttacaagccagttttgtaaggatgagttgggcccaa 6908509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 599
Target Start/End: Original strand, 20094831 - 20094861
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccac 599  Q
    |||||||||||||||||||||||||||||||    
T  20094831 aaccggcttgtaaggtgaggattgcccccac 20094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 45031398 - 45031440
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  45031398 aaccggcttgtaaggtgaggattgccccgacttataaacatat 45031440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 4828340 - 4828303
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  4828340 aaccggcttgtgaggtgaggattgcccccacttataaa 4828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 5931986 - 5932023
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  5931986 aaccggcttgtgaggtgaggattgcccccacttataaa 5932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 7729988 - 7729951
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  7729988 aaccggcttgtgaggtgaggattgcccccacttataaa 7729951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 17469865 - 17469828
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  17469865 aaccggcttgtgaggtgaggattgcccccacttataaa 17469828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 17477112 - 17477075
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  17477112 aaccggcttgtgaggtgaggattgcccccacttataaa 17477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 19256623 - 19256660
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  19256623 aaccggcttgtgaggtgaggattgcccccacttataaa 19256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 24075343 - 24075380
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  24075343 aaccggcttgtgaggtgaggattgcccccacttataaa 24075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 30966104 - 30966141
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  30966104 aaccggcttgtaaggtgaggactgcccccacttataaa 30966141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 37867869 - 37867906
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  37867869 aaccggcttgtgaggtgagaattgcccccactaataaa 37867906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 37868109 - 37868146
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||  |||||||||||||||||||||||||    
T  37868109 aaccggcttgtgtggtgaggattgcccccactaataaa 37868146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 38447464 - 38447501
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  38447464 aaccggcttgtgaggtgaggattgcccccacttataaa 38447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 38475794 - 38475757
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  38475794 aaccggcttgtgaggtgaggattgcccccacttataaa 38475757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 39052966 - 39053003
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  39052966 aaccggcttgtgaggtgaggattgcccccacttataaa 39053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 606
Target Start/End: Original strand, 25460730 - 25460768
Alignment:
Q  568 caaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  25460730 caaccggcttgtaaggtgaggattgcccccacttataaa 25460768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 25145759 - 25145796
Alignment:
Q  571 ccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25145759 ccggcttgtgaggtgaggattgcccccactaataaata 25145796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 17452716 - 17452755
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  17452716 aaccggcttgtgaggtgaggattgcccccacttataaata 17452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 41035864 - 41035906
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  41035864 aaccggcttgtgaggtgaggattgcccccacttataaacatat 41035906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 2859664 - 2859701
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  2859664 aaccggcttgtgaggtgaggattacccccactaataaa 2859701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 4113043 - 4113080
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  4113043 aaccggcttgtgaggtgaggattgcccccacttataaa 4113080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 7465682 - 7465719
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  7465682 aaccggcttgtgaggtgaggattgcccccacttataaa 7465719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 12244999 - 12245036
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  12244999 aaccggcttgtgaggtgaggattgcccccacttataaa 12245036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 25145522 - 25145559
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  25145522 aaccgacttgtgaggtgaggattgcccccactaataaa 25145559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 40079199 - 40079162
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  40079199 aaccggcttgtgaggtgaggattgcccccacttataaa 40079162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 1963 - 1926
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1963 aaccggcttgtaaggtgaggattgcccccacttataaa 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 2198 - 2161
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  2198 aaccggcttgtaaggtgaggattgcccccacttataaa 2161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 1596875 - 1596838
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1596875 aaccggcttgtaaggtgaggattgcccccacttataaa 1596838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 29469652 - 29469615
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29469652 aaccggcttgtaaggtgaggattgcccccacttataaa 29469615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 29469887 - 29469850
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29469887 aaccggcttgtaaggtgaggattgcccccacttataaa 29469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 600
Target Start/End: Complemental strand, 1596641 - 1596610
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccact 600  Q
    ||||||||||||||||||||||||||||||||    
T  1596641 aaccggcttgtaaggtgaggattgcccccact 1596610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 4886376 - 4886334
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||    
T  4886376 aaccggcttgtgaggtgaggattgcccccattaataaacatat 4886334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 21054990 - 21055032
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  21054990 aaccggcttgtgaggtgaggattgcccccacttataaacatat 21055032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 606
Target Start/End: Complemental strand, 21861573 - 21861539
Alignment:
Q  572 cggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||||||||||| |||||    
T  21861573 cggcttgtaaggtgaggattgcccccacttataaa 21861539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 1793793 - 1793756
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  1793793 aacctgcttgtgaggtgaggattgcccccactaataaa 1793756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 10882042 - 10882079
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  10882042 aaccggcttgtgaggtgaggattgcccccacttataaa 10882079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 21861341 - 21861304
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  21861341 aaccggcttgtaaggtgaggattgccctcacttataaa 21861304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 25620183 - 25620146
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  25620183 aaccggcttgtgaggtgaggattgcccccacttataaa 25620146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 31485696 - 31485733
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  31485696 aaccggcttgtcaggtgaggattgcccccacttataaa 31485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 34027440 - 34027403
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  34027440 aaccggcttgtgaggtgaggattgcccccacttataaa 34027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 557
Target Start/End: Complemental strand, 43790969 - 43790876
Alignment:
Q  465 gtgtgttaagagttccaccttggatgag-tatggcctgaacatatgtttataagtaggggaggtccttgtcttacaagccaattttgtaaggat 557  Q
    |||||||||||||||| | ||| ||  | |||||| ||||||||||||||||| | ||||  |||||   ||||||||||| ||||||||||||    
T  43790969 gtgtgttaagagttccgcattgaatttgatatggcttgaacatatgtttataattgggggtagtcctcaccttacaagccagttttgtaaggat 43790876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 48243098 - 48243135
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  48243098 aaccggcttgtgaggtgaggattgcccccacttataaa 48243135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 48243474 - 48243511
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  48243474 aaccggcttgtaagatgaggattgcccccacttataaa 48243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 13353248 - 13353211
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  13353248 aaccggcttgtaaggtgaggattgcccccacttataaa 13353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 33796373 - 33796336
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    |||||||||||||||||||||||||||||||| |||||    
T  33796373 aaccggcttgtaaggtgaggattgcccccacttataaa 33796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 570
Target Start/End: Original strand, 18286667 - 18286703
Alignment:
Q  534 cttacaagccaattttgtaaggatgagtttggcccaa 570  Q
    ||||||||||||||||||||||||||||| |||||||    
T  18286667 cttacaagccaattttgtaaggatgagttaggcccaa 18286703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 600
Target Start/End: Original strand, 6623447 - 6623478
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccact 600  Q
    ||||||||||||||||||||||||||||||||    
T  6623447 aaccggcttgtaaggtgaggattgcccccact 6623478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 17147697 - 17147736
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  17147697 aaccggcttgtgaggtgaggattgcccccacttataaata 17147736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 28867994 - 28868033
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  28867994 aaccggcttgtgaggtgaggattgcccccacttataaata 28868033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 24554164 - 24554122
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||    
T  24554164 aaccggcttgtgaggtgaagattgcccccacttataaatatat 24554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 33494586 - 33494544
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||    
T  33494586 aaccggcttgtgaggtgaggattgcccccacttataaacatat 33494544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 4868614 - 4868651
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  4868614 aaccggcttgtgaggtgaggattgcccccacttataaa 4868651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 4868850 - 4868887
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  4868850 aaccggcttgtgaggtgaggattgcccccacttataaa 4868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 8026436 - 8026399
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  8026436 aaccggcttgtgaggtgaggattgcccccacttataaa 8026399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 9705301 - 9705264
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  9705301 aaccggcttgtgaggtgaggattgcccccacttataaa 9705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 19712761 - 19712724
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  19712761 aaccggcttgtgaggtgaggattgcccccacttataaa 19712724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 27772761 - 27772724
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  27772761 aaccggcttgtgaggtgaggattgcccccacttataaa 27772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.000000001; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 6919231 - 6919268
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  6919231 aaccggcttttaaggtgaggattgcccccactaataaa 6919268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 19522134 - 19522097
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19522134 aaccggcttgtgaggtgaggattgcccccactaataaa 19522097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 608
Target Start/End: Complemental strand, 21306933 - 21306895
Alignment:
Q  570 accggcttgtaaggtgaggattgcccccactaataaata 608  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  21306933 accggcttgtgaggtgaggattgcccccacttataaata 21306895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 608
Target Start/End: Complemental strand, 21314771 - 21314733
Alignment:
Q  570 accggcttgtaaggtgaggattgcccccactaataaata 608  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  21314771 accggcttgtgaggtgaggattgcccccacttataaata 21314733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 60134 - 60097
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  60134 aaccggcttgtgaggtgaggattgcccccacttataaa 60097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 19705950 - 19705913
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  19705950 aaccggcttataaggtgaggattgcccccacttataaa 19705913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 24528587 - 24528550
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  24528587 aaccggcttgtgaggtgaggattgcccccacttataaa 24528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 41666794 - 41666831
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  41666794 aaccggcttgtgaggtgaggattgcccccacttataaa 41666831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 41667030 - 41667067
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  41667030 aaccggcttgtgaggtgaggattgcccccacttataaa 41667067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 20327651 - 20327690
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaata 608  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  20327651 aaccggcttgtgaggtgaggattgcccccacttataaata 20327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 569
Target Start/End: Original strand, 30332522 - 30332557
Alignment:
Q  534 cttacaagccaattttgtaaggatgagtttggccca 569  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30332522 cttacaagccaattttgtaaggatgagttaggccca 30332557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 1723113 - 1723150
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  1723113 aaccggcttgtgaggtgaggattgcccccacttataaa 1723150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 11589832 - 11589795
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  11589832 aaccggcttgtgaggtgaggattgcccccacttataaa 11589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 20327886 - 20327923
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  20327886 aaccggcttgtgaggtgaggattgcccccacttataaa 20327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23691229 - 23691266
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23691229 aaccggcttgtgaggtgaggattgcccccacttataaa 23691266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23708029 - 23708066
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23708029 aaccggcttgtgaggtgaggattgcccccacttataaa 23708066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23708261 - 23708298
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23708261 aaccggcttgtgaggtgaggattgcccccacttataaa 23708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23726485 - 23726522
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23726485 aaccggcttgtgaggtgaggattgcccccacttataaa 23726522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23726717 - 23726754
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23726717 aaccggcttgtgaggtgaggattgcccccacttataaa 23726754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23744941 - 23744978
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23744941 aaccggcttgtgaggtgaggattgcccccacttataaa 23744978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 23745173 - 23745210
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  23745173 aaccggcttgtgaggtgaggattgcccccacttataaa 23745210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 24063466 - 24063503
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  24063466 aaccggcttgtgaggtgaggattgcccccacttataaa 24063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 24063698 - 24063735
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  24063698 aaccggcttgtgaggtgaggattgcccccacttataaa 24063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 39269378 - 39269341
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  39269378 aaccggcttgtgaggtgaggattgcccccacttataaa 39269341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 45138839 - 45138876
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  45138839 aaccggcttgtgaggtgaggattgcccccacttataaa 45138876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 54368563 - 54368526
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  54368563 aaccggcttgtgaggtgaggattgcccccacttataaa 54368526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000006; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Original strand, 35418451 - 35418493
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaatatat 611  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  35418451 aaccggcttgtgaggtgaggattgcccccacctataaatatat 35418493  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 93160 - 93197
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  93160 aaccggcttgtaaggtgaggagtgcccccacttataaa 93197  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 2324287 - 2324250
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  2324287 aaccggcttgtgaggtgaggattgcccccacttataaa 2324250  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 2324521 - 2324484
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  2324521 aaccggcttgtgaggtgaggattgcccccacttataaa 2324484  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 5711476 - 5711513
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  5711476 aaccggcttgttaggtgaggattgcccccacttataaa 5711513  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 14466447 - 14466484
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  14466447 aaccggcttgtaaggtgaggattgctcccacttataaa 14466484  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 16419549 - 16419512
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  16419549 aaccggcttgtgaggtgaggattgcccccacttataaa 16419512  T

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Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 17525375 - 17525412
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  17525375 aaccggcttgtgaggtgaggattgcccccacttataaa 17525412  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 17719447 - 17719410
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  17719447 aaccggcttgtgaggtgaggattgcccccacttataaa 17719410  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 28407830 - 28407867
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  28407830 aaccggcttgtgaggtgaggattgcccccacttataaa 28407867  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 32884154 - 32884117
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  32884154 aaccggcttgtgaggtgaggattgcccccacttataaa 32884117  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 567
Target Start/End: Original strand, 36901328 - 36901361
Alignment:
Q  534 cttacaagccaattttgtaaggatgagtttggcc 567  Q
    ||||||||||| ||||||||||||||||||||||    
T  36901328 cttacaagccatttttgtaaggatgagtttggcc 36901361  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 40379246 - 40379283
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  40379246 aaccggcttgtgaggtgaggattgcccccacttataaa 40379283  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 40379481 - 40379518
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  40379481 aaccggcttgtgaggtgaggattgcccccacttataaa 40379518  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 4466 - 4503
Alignment:
Q  569 aaccggcttgtaaggtgaggattgcccccactaataaa 606  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  4466 aaccggcttgtgaggtgaggattgcccccacttataaa 4503  T

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