View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2640-Insertion-9 (Length: 735)

Name: NF2640-Insertion-9
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2640-Insertion-9
NF2640-Insertion-9
[»] chr7 (46 HSPs)
chr7 (8-735)||(37307644-37308364)
chr7 (607-715)||(45967355-45967463)
chr7 (611-715)||(9667229-9667333)
chr7 (601-715)||(23198513-23198626)
chr7 (617-685)||(13054631-13054699)
chr7 (603-687)||(24250136-24250220)
chr7 (611-715)||(27227262-27227366)
chr7 (615-683)||(47684489-47684557)
chr7 (607-696)||(45725117-45725206)
chr7 (627-686)||(5808398-5808457)
chr7 (611-713)||(25091169-25091270)
chr7 (460-524)||(42435389-42435453)
chr7 (456-499)||(9819565-9819608)
chr7 (456-499)||(10721490-10721533)
chr7 (640-689)||(10690881-10690930)
chr7 (640-689)||(24188504-24188553)
chr7 (456-497)||(29734808-29734849)
chr7 (607-656)||(41780524-41780573)
chr7 (615-683)||(32958527-32958595)
chr7 (456-499)||(1285085-1285128)
chr7 (456-499)||(3948056-3948099)
chr7 (460-499)||(4398332-4398371)
chr7 (460-499)||(8683076-8683115)
chr7 (607-689)||(12772149-12772232)
chr7 (456-523)||(19599147-19599214)
chr7 (456-499)||(22267583-22267626)
chr7 (456-499)||(25246773-25246816)
chr7 (612-655)||(27744644-27744687)
chr7 (611-650)||(29551169-29551208)
chr7 (640-683)||(36876999-36877042)
chr7 (654-689)||(41084073-41084108)
chr7 (456-498)||(3196659-3196701)
chr7 (455-497)||(8663295-8663337)
chr7 (460-498)||(9522918-9522956)
chr7 (457-499)||(10555359-10555401)
chr7 (460-498)||(39280835-39280873)
chr7 (456-498)||(44558791-44558833)
chr7 (640-689)||(9712185-9712234)
chr7 (640-689)||(16200593-16200642)
chr7 (601-689)||(23102505-23102594)
chr7 (461-498)||(29237574-29237611)
chr7 (456-493)||(31037665-31037702)
chr7 (640-689)||(36114328-36114377)
chr7 (460-493)||(36803844-36803877)
chr7 (460-525)||(41029278-41029343)
chr7 (457-498)||(46823035-46823076)
[»] chr1 (49 HSPs)
chr1 (607-715)||(8757268-8757376)
chr1 (640-715)||(7550018-7550093)
chr1 (601-715)||(2098752-2098865)
chr1 (619-705)||(19175123-19175209)
chr1 (460-524)||(34632175-34632239)
chr1 (612-715)||(35996984-35997087)
chr1 (456-524)||(14905407-14905475)
chr1 (464-524)||(28832162-28832222)
chr1 (456-499)||(11014234-11014277)
chr1 (612-678)||(2661632-2661698)
chr1 (456-498)||(16533050-16533092)
chr1 (456-494)||(44243875-44243913)
chr1 (456-498)||(47961306-47961348)
chr1 (456-525)||(3431332-3431401)
chr1 (465-522)||(12268977-12269034)
chr1 (640-689)||(35605610-35605659)
chr1 (456-524)||(3528460-3528528)
chr1 (460-524)||(17139508-17139572)
chr1 (456-524)||(29441872-29441940)
chr1 (464-524)||(32950752-32950812)
chr1 (462-498)||(37045163-37045199)
chr1 (456-524)||(44641529-44641597)
chr1 (460-496)||(50533077-50533113)
chr1 (460-499)||(23171313-23171352)
chr1 (640-687)||(32915576-32915623)
chr1 (607-689)||(42490363-42490446)
chr1 (456-498)||(3393585-3393627)
chr1 (460-498)||(5503782-5503820)
chr1 (460-494)||(7925370-7925404)
chr1 (460-498)||(13234084-13234122)
chr1 (460-522)||(18166608-18166670)
chr1 (460-498)||(21400040-21400078)
chr1 (456-498)||(28032286-28032328)
chr1 (456-498)||(29233991-29234033)
chr1 (456-498)||(30561725-30561767)
chr1 (460-498)||(30795707-30795745)
chr1 (464-498)||(32497498-32497532)
chr1 (456-498)||(34521207-34521249)
chr1 (460-494)||(36371061-36371095)
chr1 (460-498)||(48681950-48681988)
chr1 (460-498)||(52441528-52441566)
chr1 (460-493)||(14393-14426)
chr1 (457-498)||(1864236-1864277)
chr1 (461-498)||(13775628-13775665)
chr1 (640-689)||(23233985-23234034)
chr1 (456-497)||(24695561-24695602)
chr1 (454-499)||(29741950-29741995)
chr1 (640-681)||(30246011-30246052)
chr1 (456-493)||(40214701-40214738)
[»] chr8 (37 HSPs)
chr8 (607-715)||(28300093-28300201)
chr8 (601-653)||(19756416-19756468)
chr8 (601-687)||(1028751-1028837)
chr8 (609-683)||(15837177-15837251)
chr8 (460-525)||(11708992-11709057)
chr8 (614-683)||(12959745-12959814)
chr8 (611-668)||(13147742-13147799)
chr8 (457-498)||(40919376-40919417)
chr8 (460-498)||(37015853-37015891)
chr8 (456-525)||(4600268-4600337)
chr8 (456-521)||(37938497-37938562)
chr8 (612-693)||(42445782-42445863)
chr8 (464-524)||(18533679-18533739)
chr8 (638-686)||(36540324-36540372)
chr8 (455-494)||(1230682-1230721)
chr8 (632-687)||(9587600-9587655)
chr8 (460-499)||(13286137-13286176)
chr8 (607-689)||(17072516-17072599)
chr8 (607-689)||(17575672-17575755)
chr8 (607-681)||(38283166-38283240)
chr8 (456-498)||(7553681-7553723)
chr8 (456-498)||(8717492-8717534)
chr8 (456-522)||(10967214-10967279)
chr8 (456-498)||(12714387-12714429)
chr8 (456-498)||(13575291-13575333)
chr8 (460-498)||(20469328-20469366)
chr8 (456-498)||(29652220-29652262)
chr8 (460-498)||(33445576-33445614)
chr8 (460-498)||(36018547-36018585)
chr8 (460-498)||(39821890-39821928)
chr8 (460-498)||(44019555-44019593)
chr8 (457-498)||(444127-444168)
chr8 (459-492)||(15167055-15167088)
chr8 (461-498)||(29908018-29908055)
chr8 (465-498)||(31336824-31336857)
chr8 (456-497)||(37750017-37750058)
chr8 (459-512)||(42208472-42208525)
[»] chr3 (53 HSPs)
chr3 (611-717)||(38745291-38745397)
chr3 (607-683)||(41259947-41260023)
chr3 (607-716)||(9737570-9737679)
chr3 (617-715)||(21892527-21892624)
chr3 (602-668)||(52910377-52910443)
chr3 (611-685)||(54240640-54240714)
chr3 (612-668)||(51829556-51829612)
chr3 (611-705)||(50959001-50959095)
chr3 (611-653)||(11988929-11988971)
chr3 (611-675)||(32594610-32594671)
chr3 (460-498)||(33223874-33223912)
chr3 (621-672)||(55009571-55009622)
chr3 (460-498)||(7232201-7232239)
chr3 (618-668)||(21177040-21177090)
chr3 (457-498)||(2662095-2662136)
chr3 (606-683)||(6757275-6757352)
chr3 (607-656)||(35381811-35381860)
chr3 (457-498)||(39100101-39100142)
chr3 (460-524)||(8113553-8113617)
chr3 (464-524)||(10922299-10922359)
chr3 (460-524)||(22722408-22722472)
chr3 (619-683)||(27100918-27100982)
chr3 (647-687)||(31982771-31982811)
chr3 (460-524)||(34899103-34899167)
chr3 (465-524)||(10440695-10440754)
chr3 (612-687)||(12111037-12111112)
chr3 (621-714)||(17002906-17002996)
chr3 (613-671)||(36786572-36786631)
chr3 (460-499)||(39216357-39216396)
chr3 (464-498)||(2078250-2078284)
chr3 (464-498)||(3176990-3177024)
chr3 (456-498)||(3755341-3755383)
chr3 (456-498)||(5428453-5428495)
chr3 (460-498)||(6901471-6901509)
chr3 (456-498)||(7202933-7202975)
chr3 (460-498)||(13800673-13800711)
chr3 (460-498)||(18870742-18870780)
chr3 (478-524)||(25727958-25728004)
chr3 (456-498)||(43345024-43345066)
chr3 (460-498)||(43490434-43490472)
chr3 (460-498)||(45431954-45431992)
chr3 (460-522)||(48315017-48315079)
chr3 (460-498)||(50570206-50570244)
chr3 (456-498)||(54230116-54230158)
chr3 (464-497)||(1757687-1757720)
chr3 (460-497)||(7868728-7868765)
chr3 (457-498)||(8174273-8174314)
chr3 (460-512)||(24120423-24120476)
chr3 (456-517)||(35126267-35126328)
chr3 (460-497)||(35492799-35492836)
chr3 (457-498)||(35548305-35548346)
chr3 (460-509)||(38869524-38869573)
chr3 (457-494)||(53852738-53852775)
[»] chr4 (66 HSPs)
chr4 (611-715)||(13538253-13538357)
chr4 (611-715)||(31351671-31351775)
chr4 (601-715)||(25273057-25273170)
chr4 (607-713)||(35010377-35010483)
chr4 (614-707)||(35130612-35130705)
chr4 (612-715)||(38415494-38415597)
chr4 (607-683)||(50263984-50264060)
chr4 (617-715)||(28091333-28091431)
chr4 (612-717)||(9460166-9460270)
chr4 (610-706)||(3746384-3746479)
chr4 (607-679)||(39691500-39691572)
chr4 (612-681)||(45333451-45333522)
chr4 (612-681)||(45341141-45341212)
chr4 (612-715)||(42657508-42657611)
chr4 (611-678)||(49479499-49479566)
chr4 (460-524)||(8494993-8495057)
chr4 (612-681)||(10601906-10601975)
chr4 (615-683)||(38438367-38438435)
chr4 (464-499)||(45970723-45970758)
chr4 (459-525)||(18004470-18004536)
chr4 (460-498)||(21317355-21317393)
chr4 (457-498)||(2649750-2649791)
chr4 (464-525)||(22630350-22630411)
chr4 (464-521)||(40070962-40071019)
chr4 (460-524)||(836226-836290)
chr4 (645-685)||(2832091-2832131)
chr4 (611-675)||(7921630-7921694)
chr4 (456-524)||(8027388-8027456)
chr4 (460-524)||(11949754-11949818)
chr4 (456-524)||(12671739-12671807)
chr4 (611-683)||(17882243-17882313)
chr4 (456-524)||(22164260-22164328)
chr4 (612-681)||(26336848-26336919)
chr4 (607-715)||(40981780-40981888)
chr4 (460-524)||(56551583-56551647)
chr4 (460-499)||(23154600-23154639)
chr4 (611-670)||(23894283-23894342)
chr4 (456-499)||(38812865-38812908)
chr4 (612-655)||(54733276-54733319)
chr4 (456-498)||(3299111-3299153)
chr4 (460-498)||(3936633-3936671)
chr4 (460-498)||(11286798-11286836)
chr4 (464-498)||(17423194-17423228)
chr4 (456-490)||(18458754-18458788)
chr4 (460-498)||(20403185-20403223)
chr4 (460-498)||(20799411-20799449)
chr4 (460-498)||(27655737-27655775)
chr4 (456-498)||(28031814-28031856)
chr4 (456-498)||(28435265-28435307)
chr4 (456-498)||(34247442-34247484)
chr4 (478-524)||(36490592-36490638)
chr4 (464-498)||(41520964-41520998)
chr4 (612-671)||(42721498-42721559)
chr4 (460-498)||(50362156-50362194)
chr4 (460-494)||(54500575-54500609)
chr4 (456-498)||(55430598-55430640)
chr4 (637-683)||(55967818-55967864)
chr4 (617-650)||(1939999-1940032)
chr4 (640-681)||(2629621-2629662)
chr4 (640-689)||(13578452-13578501)
chr4 (456-497)||(14577525-14577566)
chr4 (457-498)||(16304115-16304156)
chr4 (460-525)||(19479467-19479532)
chr4 (640-689)||(23778812-23778861)
chr4 (460-497)||(42198594-42198631)
chr4 (640-689)||(47890729-47890778)
[»] chr6 (34 HSPs)
chr6 (605-683)||(6922626-6922704)
chr6 (611-707)||(7326329-7326425)
chr6 (601-715)||(20599383-20599494)
chr6 (612-715)||(12606656-12606759)
chr6 (610-655)||(5925647-5925692)
chr6 (456-521)||(8809308-8809373)
chr6 (612-717)||(24618960-24619064)
chr6 (619-655)||(29045831-29045867)
chr6 (456-516)||(32193858-32193918)
chr6 (607-649)||(7339567-7339609)
chr6 (601-667)||(21023674-21023740)
chr6 (456-498)||(30639443-30639485)
chr6 (610-681)||(8176951-8177022)
chr6 (638-689)||(10913064-10913115)
chr6 (612-655)||(24896868-24896911)
chr6 (464-498)||(331903-331937)
chr6 (456-498)||(866302-866344)
chr6 (456-498)||(1918475-1918517)
chr6 (456-494)||(2105907-2105945)
chr6 (601-667)||(2994773-2994839)
chr6 (460-498)||(10780124-10780162)
chr6 (478-524)||(15187087-15187133)
chr6 (478-524)||(15473473-15473519)
chr6 (456-498)||(21936050-21936092)
chr6 (456-498)||(24373727-24373769)
chr6 (460-498)||(32149144-32149182)
chr6 (460-498)||(33938696-33938734)
chr6 (460-498)||(34701153-34701191)
chr6 (456-497)||(12028-12069)
chr6 (645-686)||(5544310-5544351)
chr6 (455-512)||(8637440-8637497)
chr6 (460-497)||(12276249-12276286)
chr6 (645-686)||(18631506-18631547)
chr6 (456-493)||(29457183-29457220)
[»] chr5 (40 HSPs)
chr5 (612-715)||(30327661-30327764)
chr5 (610-683)||(8032897-8032970)
chr5 (611-707)||(24793488-24793584)
chr5 (618-690)||(32398247-32398319)
chr5 (611-715)||(43406002-43406106)
chr5 (456-524)||(20365464-20365531)
chr5 (611-707)||(28282349-28282445)
chr5 (640-715)||(28580439-28580514)
chr5 (461-499)||(1642341-1642379)
chr5 (456-498)||(18489093-18489135)
chr5 (456-498)||(18538610-18538652)
chr5 (611-672)||(15409201-15409262)
chr5 (456-497)||(17861981-17862022)
chr5 (460-497)||(27721693-27721730)
chr5 (622-690)||(4387763-4387831)
chr5 (457-497)||(10917333-10917373)
chr5 (460-516)||(20927645-20927701)
chr5 (460-524)||(34436857-34436921)
chr5 (465-496)||(13150872-13150903)
chr5 (460-498)||(6489013-6489051)
chr5 (456-498)||(11017178-11017220)
chr5 (456-498)||(13409430-13409472)
chr5 (460-498)||(15889417-15889455)
chr5 (456-498)||(18278276-18278318)
chr5 (460-498)||(18789042-18789080)
chr5 (465-499)||(20206526-20206560)
chr5 (456-498)||(27903115-27903157)
chr5 (460-498)||(29962364-29962402)
chr5 (460-498)||(30012396-30012434)
chr5 (460-498)||(31591554-31591592)
chr5 (460-498)||(31602842-31602880)
chr5 (456-498)||(34206229-34206271)
chr5 (460-498)||(37614444-37614482)
chr5 (460-498)||(37791180-37791218)
chr5 (460-497)||(1669598-1669635)
chr5 (612-649)||(5002015-5002052)
chr5 (464-525)||(5107235-5107296)
chr5 (460-497)||(5485192-5485229)
chr5 (460-497)||(19248485-19248522)
chr5 (456-493)||(37054291-37054328)
[»] scaffold0166 (1 HSPs)
scaffold0166 (611-707)||(35871-35967)
[»] chr2 (46 HSPs)
chr2 (611-683)||(37123594-37123666)
chr2 (612-678)||(14368415-14368481)
chr2 (611-676)||(8915609-8915674)
chr2 (607-683)||(44287829-44287905)
chr2 (607-715)||(9198925-9199032)
chr2 (456-498)||(18782557-18782599)
chr2 (601-683)||(31068881-31068963)
chr2 (601-687)||(44831440-44831526)
chr2 (619-711)||(9932020-9932112)
chr2 (464-524)||(25395433-25395493)
chr2 (607-672)||(23948696-23948758)
chr2 (456-498)||(3197096-3197138)
chr2 (460-498)||(7206131-7206169)
chr2 (459-525)||(20644009-20644075)
chr2 (460-498)||(22608533-22608571)
chr2 (460-524)||(20565066-20565130)
chr2 (460-524)||(24581008-24581072)
chr2 (464-524)||(27412827-27412887)
chr2 (464-524)||(31815878-31815938)
chr2 (611-655)||(34319813-34319857)
chr2 (607-651)||(38690791-38690835)
chr2 (607-689)||(4183210-4183293)
chr2 (460-499)||(7029407-7029446)
chr2 (456-499)||(28771584-28771627)
chr2 (456-499)||(30762511-30762554)
chr2 (460-495)||(37984361-37984396)
chr2 (460-494)||(8727727-8727761)
chr2 (612-659)||(11997675-11997724)
chr2 (456-498)||(12124547-12124589)
chr2 (456-498)||(16221363-16221405)
chr2 (456-494)||(20517024-20517062)
chr2 (460-498)||(24592863-24592901)
chr2 (460-498)||(26999116-26999154)
chr2 (457-499)||(29133500-29133542)
chr2 (456-498)||(29896311-29896353)
chr2 (460-498)||(30243256-30243294)
chr2 (456-498)||(34464426-34464468)
chr2 (456-498)||(35685078-35685120)
chr2 (456-498)||(43117207-43117249)
chr2 (456-497)||(690790-690831)
chr2 (456-497)||(13490727-13490768)
chr2 (640-689)||(17777150-17777199)
chr2 (456-521)||(29734693-29734758)
chr2 (465-494)||(30799109-30799138)
chr2 (460-497)||(35451261-35451298)
chr2 (460-497)||(41668661-41668698)
[»] scaffold0178 (1 HSPs)
scaffold0178 (601-655)||(9691-9745)
[»] scaffold0122 (2 HSPs)
scaffold0122 (455-499)||(31171-31215)
scaffold0122 (456-498)||(14203-14245)
[»] scaffold0072 (1 HSPs)
scaffold0072 (457-515)||(15944-16002)
[»] scaffold0040 (1 HSPs)
scaffold0040 (606-668)||(58638-58700)
[»] scaffold1320 (1 HSPs)
scaffold1320 (459-492)||(1782-1815)
[»] scaffold0086 (1 HSPs)
scaffold0086 (464-525)||(19045-19106)
[»] scaffold0005 (1 HSPs)
scaffold0005 (456-497)||(239809-239850)


Alignment Details
Target: chr7 (Bit Score: 498; Significance: 0; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 8 - 735
Target Start/End: Complemental strand, 37308364 - 37307644
Alignment:
Q  8 agtctaatttttgtttattttctttctctcctttgagtttggtcatgtttctagcgtaccaactacaagcttattaccaataagagcctccaccggcttt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||| |||||||||||||    
T  37308364 agtctaatttttgtttattttctttctctcctttgagtttggtcatgtttcaagcgtaccaactacaagctta---ccaataagaggctccaccggcttt 37308268  T
Q  108 gcaaaatgttgaatggtgcaatcttcaaaatcagttgtcttctgattggtatttggtaagtctacacaccccgtcacactgaaatttaagtcctctcgtg 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  37308267 gcaaaatgttgaatggtgcaatcttcaaaatcagttgtcttctgattggtatt-ggtaagtctacacacctcgtcacactgaaatttaagtcctctcgtg 37308169  T
Q  208 tgtttagtaaaaaagaaaagtcatcttctatgtacaaaatttccagcattcgtacgcattgagtttgaatgacggaaaaaagttctttacacattataca 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37308168 tgtttagtaaaaaagaaaagtcatcttctatgtacaaaatttccagcattcgtacgcattgagtttgaatgacggaaaaaagttctttacacattataca 37308069  T
Q  308 cctttgaaacatattttcacaccggaaagaagtatgagccgccacatatctggcagtgtaaatgatgccaacacttcaaatttatttaagtttggctctt 407  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  37308068 ccttttaaacatattttcacaccggaaagaagtatgagccgccacatatctggcagtgt-------------acttcaaatttatttaagtttggctctt 37307982  T
Q  408 tgcggtttgaaattcatttatttaattaaacaaatttatctaatcatcgagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  37307981 tgcggtttgaaattcatttatttaattaaacaaatttatctaatcatcgagtttagctcagttgataggaacaatgcataatatatgcaagatccgatgt 37307882  T
Q  508 tcaaatcccgaccaccat------nnnnnnnncgaatttagctaaaagtatgaattgtctaaatctaaataagtaatccaatttaggtttga---nnnnn 598  Q
    ||||||||||| ||||||              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||            
T  37307881 tcaaatcccgagcaccataaaaaaaaaaaaaacgaatttagctaaaagtatgaattgtctaaatctaactaagtaatccaatttaggtttgatttttttt 37307782  T
Q  599 nngtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtag 698  Q
      || ||||||||||||||||||||||| ||||||||| | ||||||||||||||||  || |||||||||||||||||  |||||||||||||||||||    
T  37307781 ttgttagatagcctagtggctagattcaaacacattatttgtggagaagtggggaatccggagttcgaaccccgaccccgacacataatatctcttgtag 37307682  T
Q  699 ctatcaactaagcta-cattactatctcttgtagctac 735  Q
    |||||||||||| ||   ||||||||||||||||||||    
T  37307681 ctatcaactaagttatgcttactatctcttgtagctac 37307644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 607 - 715
Target Start/End: Original strand, 45967355 - 45967463
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    |||||||||||||||||||||||||||||||| || | ||||| |||||| ||||||||||||||||||| || ||||||||||   |||||||| ||||    
T  45967355 tagcctagtggctagattcacacacattatgtgtgaaaaagtgaggaattcggggttcgaaccccgacccatgtacataatatccactgtagctaccaac 45967454  T
Q  707 taagctaca 715  Q
    | |||||||    
T  45967455 tgagctaca 45967463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 611 - 715
Target Start/End: Original strand, 9667229 - 9667333
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||| |||| | |||||||  |||||| ||||| ||    
T  9667229 ctagtggctggattcacacacattatgtatggagaagtgggaaatttggggttcgaactccagcccctacacaaattatctctgatagctaccaactgag 9667328  T
Q  711 ctaca 715  Q
    |||||    
T  9667329 ctaca 9667333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 601 - 715
Target Start/End: Original strand, 23198513 - 23198626
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttg-tagc 699  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| | |||||| ||||||| ||||||||||| | |||| |||| ||||    
T  23198513 gtcaaatagcctagtggctagatttacacacattatgtgtggagaagtggggaa-tcggggtttgaaccccaacccctgcacaaattatc-cttgatagc 23198610  T
Q  700 tatcaactaagctaca 715  Q
    |||||||| |||||||    
T  23198611 tatcaactgagctaca 23198626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 685
Target Start/End: Complemental strand, 13054699 - 13054631
Alignment:
Q  617 gctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacata 685  Q
    ||||||||| |||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||    
T  13054699 gctagattcgcacacattatgtgtggagaagtgggaaatctggggttcgaaccccggcccctgcacata 13054631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 603 - 687
Target Start/End: Original strand, 24250136 - 24250220
Alignment:
Q  603 cagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||| ||||   |||||||||| ||  ||||||||||||||    
T  24250136 cagatagcctagtgactagattcacacacattatgtgtggaaaagtggagaatccagggttcgaacacccgcccctgcacataat 24250220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 715
Target Start/End: Original strand, 27227262 - 27227366
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||| | | ||||||  ||| | ||||||| |||| || ||||| ||    
T  27227262 ctagtggctagattcaaacacattatgtgtggagaagtggggaatctgggattcgaaacacaacccctatacaaattatctctggtaggtaccaactgag 27227361  T
Q  711 ctaca 715  Q
    |||||    
T  27227362 ctaca 27227366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 47684489 - 47684557
Alignment:
Q  615 tggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||||||||||||||||||||||| || |||  ||||||| |||||| |||||||||||    
T  47684489 tggctagattcacacacattatgtatggagaagtaggaaatccggggttcaaaccccaacccctgcaca 47684557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 696
Target Start/End: Original strand, 45725117 - 45725206
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgt 696  Q
    |||||||||||||||||| ||| ||||||||| | |||||||| | |||| | | |||||| ||||||||||||||| | ||||||||||    
T  45725117 tagcctagtggctagatttacatacattatgtgtagagaagtgagtaattcgagattcgaatcccgacccctgcacaaattatctcttgt 45725206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 686
Target Start/End: Original strand, 5808398 - 5808457
Alignment:
Q  627 cacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataa 686  Q
    |||||||||||| |||||||||| |||||  |||||||||||||| ||||||||||||||    
T  5808398 cacacattatgtgtggagaagtgaggaatccggggttcgaaccccaacccctgcacataa 5808457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 713
Target Start/End: Complemental strand, 25091270 - 25091169
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    |||||||||||||||||||||||||||| || |||||| |  ||| ||| ||| ||||| ||||||||||||| | |||| || ||||||| ||||| ||    
T  25091270 ctagtggctagattcacacacattatgtgtgaagaagt-gaaaatctggagtttgaacctcgacccctgcacaaattatccctggtagctaccaactgag 25091172  T
Q  711 cta 713  Q
    |||    
T  25091171 cta 25091169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 42435453 - 42435389
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||| || ||||||||||||||||||  |  |||||||||||| ||||||||    
T  42435453 ttagctcagttggtagagactatgcataatatatgcaaggtctaatgttcaaatcctgaccacca 42435389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 9819608 - 9819565
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  9819608 gagtttatctcagttggtaggaacaatgcataatatatgcaaga 9819565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 10721533 - 10721490
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  10721533 gagtttatctcagttggtaggaacaatgcataatatatgcaaga 10721490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 10690930 - 10690881
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  |||||||||||||| |||||||||||| |||||||    
T  10690930 tggagaagtggggtgtttggggttcgaactccgacccctgcatataatat 10690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 24188553 - 24188504
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  24188553 tggagaagtggggtgtctggggttcgaaccccgacccctgcatataatat 24188504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 29734849 - 29734808
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  29734849 gagtttagctcagtcgatagaaacaatgcataatatatgcaa 29734808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 41780573 - 41780524
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatt 656  Q
    ||||||||||| |||||||||||||||||||| || ||||||| ||||||    
T  41780573 tagcctagtggttagattcacacacattatgtgtgtagaagtgaggaatt 41780524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 683
Target Start/End: Complemental strand, 32958595 - 32958527
Alignment:
Q  615 tggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||||||||||||| || |||| |||||| ||||  ||||||||||| | ||| ||||||||    
T  32958595 tggctagattcacacacattaagtgtggataagtggagaatccggggttcgaactctgactcctgcaca 32958527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 1285128 - 1285085
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||    
T  1285128 gagtttaactcagttgataggaacaatgcataatatatgcaaga 1285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 3948056 - 3948099
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||    
T  3948056 gagtttaactcagttgatagagacaatgcataatatatgcaaga 3948099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Original strand, 4398332 - 4398371
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  4398332 ttagctcagttggtaagaacaatgcataatatatgcaaga 4398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Original strand, 8683076 - 8683115
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  8683076 ttagctcagttggtatagacaatgcataatatatgcaaga 8683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 689
Target Start/End: Complemental strand, 12772232 - 12772149
Alignment:
Q  607 tagcctagtggctagat-tcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||||||||  |||||||  |||  ||||||||||||| | ||  ||||||||||||||||| |||||| |||||||    
T  12772232 tagcctagtggctagagctcacacaatttaattatggagaagtggagtatccggggttcgaaccccgactcctgcatataatat 12772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 523
Target Start/End: Original strand, 19599147 - 19599214
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacc 523  Q
    ||||||| |||||||||||   |||||||||||||||||||||  |||  ||||||| ||||||||||    
T  19599147 gagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 22267583 - 22267626
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||    
T  22267583 gagtttaactcagttggtagagacaatgcataatatatgtaaga 22267626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 25246773 - 25246816
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  25246773 gagtttagctcagttgataaagacaatgcataatatatgcaaga 25246816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 655
Target Start/End: Complemental strand, 27744687 - 27744644
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    |||||| || ||||||||||||||||| ||||||||||||||||    
T  27744687 tagtggttaaattcacacacattatgtgtggagaagtggggaat 27744644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 650
Target Start/End: Complemental strand, 29551208 - 29551169
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtgg 650  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  29551208 ctagtagctagattcgcacacattatgtatggagaagtgg 29551169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 683
Target Start/End: Original strand, 36876999 - 36877042
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||| |||  ||||||||||||||||||||||||||    
T  36876999 tggagaagtgggaaatccggggttcgaaccccgacccctgcaca 36877042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 689
Target Start/End: Complemental strand, 41084108 - 41084073
Alignment:
Q  654 atttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||||||||||||||||| |||||||    
T  41084108 atttggggttcgaaccccgacccctgcatataatat 41084073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 3196701 - 3196659
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||| | |||||| ||||||||||||||    
T  3196701 gagtttagctcagttggtaaagacaatgtataatatatgcaag 3196659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 8663295 - 8663337
Alignment:
Q  455 cgagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||| |||||||||||||||| || ||||||||||||||||||    
T  8663295 cgagcttagctcagttggtagcaagaatgcataatatatgcaa 8663337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 9522918 - 9522956
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  9522918 ttagctcagttggtatgaacaatgcataatatatgcaag 9522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 499
Target Start/End: Complemental strand, 10555401 - 10555359
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||  ||||||| |||||||||||||||    
T  10555401 agtttagctcagttggtatgaacaatgtataatatatgcaaga 10555359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 39280873 - 39280835
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  39280873 ttagctcagttggtaagaacaatgcataatatatgcaag 39280835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 44558833 - 44558791
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  44558833 gagtttagctcagttggtatggacaatgcataatatatgcaag 44558791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 9712185 - 9712234
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  |  |||||||||||||||||||||||| |||||||    
T  9712185 tggagaagtggggtgtccggggttcgaaccccgacccctgcatataatat 9712234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 16200642 - 16200593
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||| |||||  | ||||||||||||||||||||||||| |||||||    
T  16200642 tggagaaatggggtgtctggggttcgaaccccgacccctgcatataatat 16200593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 23102505 - 23102594
Alignment:
Q  601 gtcagatagcctagtggctagat-tcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||| ||||||||||||||||  |||||||  |||  | |||||||||||||  |  ||||||||||||||| |||||||| |||||||    
T  23102505 gtcaggtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatat 23102594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 498
Target Start/End: Complemental strand, 29237611 - 29237574
Alignment:
Q  461 tagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  29237611 tagctcagttggtaagaacaatgcataatatatgcaag 29237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 31037702 - 31037665
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatat 493  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  31037702 gagtttaactcagttggtaggaacaatgcataatatat 31037665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 36114328 - 36114377
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||| |  |||||||||||||||||||||| ||||| |||||||    
T  36114328 tggagaagtgagatatttggggttcgaaccccgaccgctgcatataatat 36114377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 493
Target Start/End: Original strand, 36803844 - 36803877
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatat 493  Q
    ||||||||||||||||| ||||||||||||||||    
T  36803844 ttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 41029278 - 41029343
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    |||||||||||||||   |||||| ||||||||||||||  |||  |||| |||||||||||||||    
T  41029278 ttagctcagttggtaaggacaatgtataatatatgcaaggtccggggttcgaatcccgaccaccat 41029343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 46823035 - 46823076
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  46823035 agtttagctcagctggtaggagcaatgcataatatatgcaag 46823076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 607 - 715
Target Start/End: Original strand, 8757268 - 8757376
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    ||||||||||| |||||||||||||||||||| |||||| |||||||||   |||||||||||||| |||||||||||||| ||||| ||||||| ||||    
T  8757268 tagcctagtggttagattcacacacattatgtgtggagacgtggggaatccagggttcgaaccccggcccctgcacataatgtctctggtagctaccaac 8757367  T
Q  707 taagctaca 715  Q
    |||||||||    
T  8757368 taagctaca 8757376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 640 - 715
Target Start/End: Complemental strand, 7550093 - 7550018
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagctaca 715  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||| ||||| ||||||||||||| |||||||    
T  7550093 tggagaagtggggaatccggggttcgaaccccggcccctgcaaataatgtctctggtagctatcaactgagctaca 7550018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 715
Target Start/End: Complemental strand, 2098865 - 2098752
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagct 700  Q
    ||||||||  |||||||||||||||||||||||||| | ||||||||||| ||||  |||||||| |  ||| ||||| |||||||||||  ||||||||    
T  2098865 gtcagataatctagtggctagattcacacacattatatgtggagaagtggagaatccggggttcggattccg-cccctacacataatatccattgtagct 2098767  T
Q  701 atcaactaagctaca 715  Q
    | ||||| |||||||    
T  2098766 accaactgagctaca 2098752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 619 - 705
Target Start/End: Original strand, 19175123 - 19175209
Alignment:
Q  619 tagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaa 705  Q
    |||||||||||| || || ||||||||| |||| |||||   |||| || ||||||||||||||||||||||||| |||||||||||    
T  19175123 tagattcacacatataatatatggagaaatgggaaattttaagttcaaatcccgacccctgcacataatatctctggtagctatcaa 19175209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 34632175 - 34632239
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||| | |||||| ||||||||||||||| |||| |||||||||||| ||||||    
T  34632175 ttagctcagttggtatagacaatgtataatatatgcaagatccgaggttcaaatcccggccacca 34632239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 612 - 715
Target Start/End: Complemental strand, 35997087 - 35996984
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    ||||||||||| ||||||||||||||| || |||||||| ||||| ||  || ||||||| ||| ||||||| | |||||||  |||||| ||||| |||    
T  35997087 tagtggctagagtcacacacattatgtgtgaagaagtggagaattcggaatttgaaccccaaccactgcacaaattatctctgatagctaccaactgagc 35996988  T
Q  712 taca 715  Q
    ||||    
T  35996987 taca 35996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 14905475 - 14905407
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||| |||||||||||  |||||| ||||    
T  14905475 gagtttaactcagttggtagaaacaatacttaatatatgtaagatccgatgttcaatccccgactacca 14905407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 28832222 - 28832162
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||  ||||||||||||||||||||||  | || |||||||||||||||||||    
T  28832222 ctcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccacca 28832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 11014234 - 11014277
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  11014234 gagtttagctcagttggtagagacagtgcataatatatgcaaga 11014277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 678
Target Start/End: Original strand, 2661632 - 2661698
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccct 678  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||  || |||  |||||||||||||    
T  2661632 tagtggctagattcacacatattatgtgtggagaagtgaggaatccggtgtttaaaccccgacccct 2661698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 16533092 - 16533050
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  16533092 gagtttagctcggttggtaggaacaatgcataatatatgcaag 16533050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 494
Target Start/End: Original strand, 44243875 - 44243913
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatg 494  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  44243875 gagtttagctcagttggtaggaacaatgcataatatatg 44243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 47961348 - 47961306
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  47961348 gagtttagctcagttggcagagacaatgcataatatatgcaag 47961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Original strand, 3431332 - 3431401
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||| |||||||||||| || ||||||||||||||||||    ||| ||||||| ||||||||||||    
T  3431332 gagtttaactcagttggtaggaagaatgcataatatatgcaatgtacgaggttcaaaccccgaccaccat 3431401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 12269034 - 12268977
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccac 522  Q
    ||||||||||| ||||||||||||||||||||||  |||  ||||||| |||||||||    
T  12269034 tcagttggtaggaacaatgcataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 35605610 - 35605659
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  ||| ||||||||||||||||||||||| |||||||    
T  35605610 tggagaagtggggtgtttagggttcgaaccccgacccctgcatataatat 35605659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 3528528 - 3528460
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||| ||||||||||| |||||||||| |||  ||| |||||||  |||| ||||||    
T  3528528 gagtttagctcagttgatagaaacaatgtataatatatgtaaggtccggtgttcaagccccggccacca 3528460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 17139572 - 17139508
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||  |||||||||||||||| ||||  |||  ||||||| |||||||||||    
T  17139572 ttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccacca 17139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 29441940 - 29441872
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||| |||| |||||| ||| |||||||||||| ||||  ||||||  ||||||||||    
T  29441940 gagtttagctcagttagtaggaacaatacatgatatatgcaagatccgagattcaaactccgaccacca 29441872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 32950812 - 32950752
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||| |||||||||||||||||||||||  |||  ||||||| | |||||||||    
T  32950812 ctcagttggtataaacaatgcataatatatgcaaggtccggagttcaaacctcgaccacca 32950752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 498
Target Start/End: Complemental strand, 37045199 - 37045163
Alignment:
Q  462 agctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||| ||||||||||||||||||||||    
T  37045199 agctcagttggtaggaacaatgcataatatatgcaag 37045163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Original strand, 44641529 - 44641597
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||| ||   ||||||||||||||||||||| ||||  |||||||||| | ||||||    
T  44641529 gagtttagctcagttgatatggacaatgcataatatatgcaaggcccggggttcaaatcctggccacca 44641597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 496
Target Start/End: Original strand, 50533077 - 50533113
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgca 496  Q
    ||||||||||||||||||||| |||||||||||||||    
T  50533077 ttagctcagttggtagaaacattgcataatatatgca 50533113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Complemental strand, 23171352 - 23171313
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  23171352 ttagctcagttggtaaaaacaatgcatagtatatgcaaga 23171313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 687
Target Start/End: Original strand, 32915576 - 32915623
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    ||||||||| ||||||||| ||||||||||||||||| |||| |||||    
T  32915576 tggagaagtagggaatttgaggttcgaaccccgacccttgcaaataat 32915623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 689
Target Start/End: Original strand, 42490363 - 42490446
Alignment:
Q  607 tagcctagtggctaga-ttcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||| |||| ||||||||  |||  | |||||||||||||  |  |||||||||||||||||||||||| |||||||    
T  42490363 tagcctagtggttagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatat 42490446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 3393627 - 3393585
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||  ||||||||||||||||||||||    
T  3393627 gagtttagctcagttgatatgaacaatgcataatatatgcaag 3393585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 5503820 - 5503782
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  5503820 ttagctcagttggtagaaacaatgcataaaatatacaag 5503782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 494
Target Start/End: Original strand, 7925370 - 7925404
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||||||||| |||||||||||||||||    
T  7925370 ttagctcagttggtagagacaatgcataatatatg 7925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 13234084 - 13234122
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  13234084 ttagctcagttggtaggaacaacgcataatatatgcaag 13234122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 522
Target Start/End: Original strand, 18166608 - 18166670
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccac 522  Q
    ||||||||||||||| | ||||||||||||||||||||   |||  ||||||| |||||||||    
T  18166608 ttagctcagttggtatagacaatgcataatatatgcaaagtccggggttcaaaccccgaccac 18166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 21400078 - 21400040
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  21400078 ttagctcagttggtagggacaatgcataatatatgcaag 21400040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 28032286 - 28032328
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||    
T  28032286 gagtttagctcggttagtaaaaacaatgcataatatatgcaag 28032328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 29234033 - 29233991
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  29234033 gagtttagctcagttggtatagacaatgcataaaatatgcaag 29233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 30561725 - 30561767
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||| ||||||||  ||||||||||||||||||||||    
T  30561725 gagtttagctaagttggtaagaacaatgcataatatatgcaag 30561767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 30795707 - 30795745
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  30795707 ttagctcagttggtaagaacaatgcataatatatgcaag 30795745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 32497532 - 32497498
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||||||||||||||||||||||    
T  32497532 ctcagttggtaggaacaatgcataatatatgcaag 32497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 34521249 - 34521207
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  34521249 gagtttagctcagttggtatggacaatgcataatatatgcaag 34521207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 494
Target Start/End: Complemental strand, 36371095 - 36371061
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||||||||| |||||||||||||||||    
T  36371095 ttagctcagttggtagagacaatgcataatatatg 36371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 48681988 - 48681950
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  48681988 ttagctcagttggtatgaacaatgcataatatatgcaag 48681950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 52441566 - 52441528
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  52441566 ttagctcagttggtatagacaatgcataatatatgcaag 52441528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 493
Target Start/End: Original strand, 14393 - 14426
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatat 493  Q
    ||||||||||||||| ||||||||||||||||||    
T  14393 ttagctcagttggtataaacaatgcataatatat 14426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 1864277 - 1864236
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||| || |||||||||| |||||||||||||||||||||    
T  1864277 agtttaacttagttggtagagacaatgcataatatatgcaag 1864236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 498
Target Start/End: Complemental strand, 13775665 - 13775628
Alignment:
Q  461 tagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  13775665 tagctcagttagtagagacaatgcataatatatgcaag 13775628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 23234034 - 23233985
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||| |||  | ||||||||||||||||||||||||| |||||||    
T  23234034 tggagaagtagggtgtctggggttcgaaccccgacccctgcatataatat 23233985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 24695561 - 24695602
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  24695561 gagtttagctcagttggtatgaacaatacataatatatgcaa 24695602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 454 - 499
Target Start/End: Complemental strand, 29741995 - 29741950
Alignment:
Q  454 tcgagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||| ||||||||||||||||| |||| |||||||||||| ||||    
T  29741995 tcgagcttagctcagttggtagatacaacgcataatatatgtaaga 29741950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 681
Target Start/End: Original strand, 30246011 - 30246052
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    ||||||||||||| ||| |||||||||| |||||||||||||    
T  30246011 tggagaagtggggtattcggggttcgaatcccgacccctgca 30246052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 40214738 - 40214701
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatat 493  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  40214738 gagttgagctcagttggtagaaacaatacataatatat 40214701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 607 - 715
Target Start/End: Complemental strand, 28300201 - 28300093
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| | ||||  | ||||||| ||||    
T  28300201 tagccttgtggctagattcacacacattatgtatggagaagtggggaatccggggttcgaaccccggcccctgcacaaattatcattggtagctaccaac 28300102  T
Q  707 taagctaca 715  Q
    | |||||||    
T  28300101 tgagctaca 28300093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 601 - 653
Target Start/End: Original strand, 19756416 - 19756468
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtgggga 653  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19756416 gtcaggtagcctagtggctagattcacacacattatgtgtggagaagtgggga 19756468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 1028837 - 1028751
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||||  ||||  || ||||||||| |  ||||||||||||||    
T  1028837 gtcaggtagtctagtggctagattcacacacattatgtatgaagaagtgaagaatccggagttcgaacctcagcccctgcacataat 1028751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 609 - 683
Target Start/End: Complemental strand, 15837251 - 15837177
Alignment:
Q  609 gcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||| |||||||||||||||||| |||| || ||||||||   | |||||||||||||||||||||||    
T  15837251 gcctagtggctggattcacacacattatgtgtggaaaaatggggaatccagagttcgaaccccgacccctgcaca 15837177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 11708992 - 11709057
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||||||||  |||||||||||||||||||||  |||| ||||||| ||||||||||||    
T  11708992 ttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccaccat 11709057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 614 - 683
Target Start/End: Complemental strand, 12959814 - 12959745
Alignment:
Q  614 gtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||||||||||||||| |  | | ||||||||||| ||||||||||||||| |||||||||||    
T  12959814 gtggctagattcacacacattatatgcgaataagtggggaatctggggttcgaaccccaacccctgcaca 12959745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 611 - 668
Target Start/End: Original strand, 13147742 - 13147799
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaac 668  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||    
T  13147742 ctagtggctagattcacacacattatgtgtgaagaagtgtgaaatttggggttcgaac 13147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 40919417 - 40919376
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  40919417 agtttagctcagttggtaggaacaatgcataatatatgcaag 40919376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 37015891 - 37015853
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  37015891 ttagctcagttggtagagacaatgcataatatatgcaag 37015853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 525
Target Start/End: Complemental strand, 4600337 - 4600268
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||||||||||||  |||||| |||||||| |||||  || | |||||||||||||| |||||    
T  4600337 gagtttagctcagttggtagggacaatgtataatataggcaaggaccaaggttcaaatcccgacaaccat 4600268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 37938497 - 37938562
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgacca 521  Q
    |||||||||||||||||||   | ||||||||||||||||||   |||| ||||||||||||||||    
T  37938497 gagtttagctcagttggtatggataatgcataatatatgcaaagtccgaggttcaaatcccgacca 37938562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 693
Target Start/End: Complemental strand, 42445863 - 42445782
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctct 693  Q
    ||||||||||||||||||||||||||| | || ||||||  ||||  | |||||||||| |||| ||||||| | |||||||    
T  42445863 tagtggctagattcacacacattatgtgtagaaaagtggataattcagagttcgaaccctgaccgctgcacaaattatctct 42445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Original strand, 18533679 - 18533739
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||  ||||||||||||||||||||||| |||  ||||||| ||| |||||||    
T  18533679 ctcagttggtaagaacaatgcataatatatgcaagatccggggttcaaaccccaaccacca 18533739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 638 - 686
Target Start/End: Complemental strand, 36540372 - 36540324
Alignment:
Q  638 tatggagaagtggggaatttggggttcgaaccccgacccctgcacataa 686  Q
    ||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  36540372 tatggagaagtggagtgtttggggttcgaaccccgacccctgcatataa 36540324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 494
Target Start/End: Complemental strand, 1230721 - 1230682
Alignment:
Q  455 cgagtttagctcagttggtagaaacaatgcataatatatg 494  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  1230721 cgagtttaactcagttggtaggaacaatgcataatatatg 1230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 687
Target Start/End: Complemental strand, 9587655 - 9587600
Alignment:
Q  632 attatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    ||||||| | ||||| || ||||||| |||||||||||||||||| ||||||||||    
T  9587655 attatgtgtagagaaatgaggaatttagggttcgaaccccgacccttgcacataat 9587600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Original strand, 13286137 - 13286176
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  13286137 ttagctcagttggtatagacaatgcataatatatgcaaga 13286176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 689
Target Start/End: Original strand, 17072516 - 17072599
Alignment:
Q  607 tagcctagtggctagat-tcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||||||||  |||||||  |||  | |||||||||||||  || ||||||||||||||| |||||||| |||||||    
T  17072516 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgcatataatat 17072599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 689
Target Start/End: Complemental strand, 17575755 - 17575672
Alignment:
Q  607 tagcctagtggctagat-tcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||||||||  |||||||  |||  | |||||||||||||  || ||||||||||||||| |||||||| |||||||    
T  17575755 tagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgcatataatat 17575672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 681
Target Start/End: Complemental strand, 38283240 - 38283166
Alignment:
Q  607 tagcctagtggctaga-ttcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    |||||||||||||||| |||||||| ||||  | |||||||||||||  | |||||||||||||||| ||||||||    
T  38283240 tagcctagtggctagagttcacaca-attaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgca 38283166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 7553681 - 7553723
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| ||||||||||||  |||||||||||||||||||||    
T  7553681 gagtttaactcagttggtagggacaatgcataatatatgcaag 7553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 8717534 - 8717492
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  8717534 gagtttagctcagttggtatggacaatgcataatatatgcaag 8717492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 522
Target Start/End: Original strand, 10967214 - 10967279
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccac 522  Q
    ||||||| |||| ||| ||  ||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  10967214 gagtttaactcaattgataagaacaatgcataatatatgcaaga-ccgatgttcgaatcccggccac 10967279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 12714429 - 12714387
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  12714429 gagtttagctcagttggaagggacaatgcataatatatgcaag 12714387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 13575291 - 13575333
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||||  ||||||||||| |||||||||    
T  13575291 gagtttagctcagttggtagggacaatgcataacatatgcaag 13575333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 20469366 - 20469328
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  20469366 ttagatcagttggtataaacaatgcataatatatgcaag 20469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 29652220 - 29652262
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||  ||||||||||||||||||||||    
T  29652220 gagtttagctcagttgataagaacaatgcataatatatgcaag 29652262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 33445576 - 33445614
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  33445576 ttagctcagttggtaggaacaatgcataatatatacaag 33445614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 36018585 - 36018547
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  36018585 ttagcttagttggtagagacaatgcataatatatgcaag 36018547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 39821890 - 39821928
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  39821890 ttagctcagttggtagggacaatgcataatatatgcaag 39821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 44019555 - 44019593
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  44019555 ttagctcagttggtaagaacaatgcataatatatgcaag 44019593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 444127 - 444168
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  444127 agtttagctcagttggtaaagacaatgcataatacatgcaag 444168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 492
Target Start/End: Original strand, 15167055 - 15167088
Alignment:
Q  459 tttagctcagttggtagaaacaatgcataatata 492  Q
    ||||||||||||||||| ||||||||||||||||    
T  15167055 tttagctcagttggtaggaacaatgcataatata 15167088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 498
Target Start/End: Original strand, 29908018 - 29908055
Alignment:
Q  461 tagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  |||||||||||||||||||||    
T  29908018 tagctcagttggtagggacaatgcataatatatgcaag 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 498
Target Start/End: Complemental strand, 31336857 - 31336824
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||| ||||||||||||||||||||||    
T  31336857 tcagttggtaggaacaatgcataatatatgcaag 31336824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 37750058 - 37750017
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  37750058 gagtttagctcagttgatatgaacaatgcataatatatgcaa 37750017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 42208525 - 42208472
Alignment:
Q  459 tttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaa 512  Q
    ||||||||||||||||   |||||||||||||||||||||  |||| |||||||    
T  42208525 tttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaa 42208472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 5e-27; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 611 - 717
Target Start/End: Original strand, 38745291 - 38745397
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||| | |||| || ||| | | ||||||||    
T  38745291 ctagtggctagattcacacacattttgtgtggagaagtggggaattcggggttcgaatcccgacccctgcacaaattatccctggtaaccaccaactaag 38745390  T
Q  711 ctacatt 717  Q
    |||||||    
T  38745391 ctacatt 38745397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 607 - 683
Target Start/End: Original strand, 41259947 - 41260023
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||| ||||    
T  41259947 tagcctagtggctagattcacacacattatgtgtggagaagtggggaattcgggggtcgaaccccggcccctacaca 41260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 607 - 716
Target Start/End: Original strand, 9737570 - 9737679
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    ||||||||||| || ||||||||||||||||| | ||||| | |  |||| | ||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  9737570 tagcctagtggttatattcacacacattatgtgtagagaaatagaaaattcgaggttcgaaccctgacccctgcacataatatctctggtagctaccaac 9737669  T
Q  707 taagctacat 716  Q
    | ||||||||    
T  9737670 tgagctacat 9737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 617 - 715
Target Start/End: Original strand, 21892527 - 21892624
Alignment:
Q  617 gctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagctaca 715  Q
    |||||||||||||| | || || |||||||||||||||||| ||||||||||||||| |||| || | | ||||||| |||| |||||||| |||||||    
T  21892527 gctagattcacacataataagtgtggagaagtggggaattt-gggttcgaaccccgatccctccataaattatctctggtagttatcaactgagctaca 21892624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 602 - 668
Target Start/End: Original strand, 52910377 - 52910443
Alignment:
Q  602 tcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaac 668  Q
    |||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  52910377 tcaggtagtctagtgactagattcacacacattatgtgtggagaagtggggaatttagggtttgaac 52910443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 685
Target Start/End: Complemental strand, 54240714 - 54240640
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacata 685  Q
    ||||||| |||||||||||||||||||  |||||||||||  |||  | ||||||||||||||||||||||||||    
T  54240714 ctagtggttagattcacacacattatgcgtggagaagtggaaaatccgaggttcgaaccccgacccctgcacata 54240640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 668
Target Start/End: Original strand, 51829556 - 51829612
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaac 668  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||    
T  51829556 tagtggctagattcacatacattatgtgtggagaagtgaggaatctggggttcgaac 51829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 611 - 705
Target Start/End: Complemental strand, 50959095 - 50959001
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaa-ccccgacccctgcacataatatctcttgtagctatcaa 705  Q
    |||||||| ||||||||||||| ||||  |||||||||||||||| |||| |||||| ||||||||| || ||||||| ||| | |||||||||||    
T  50959095 ctagtggcgagattcacacacaatatgg-tggagaagtggggaatctgggattcgaacccccgacccatggacataatgtctatggtagctatcaa 50959001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 653
Target Start/End: Original strand, 11988929 - 11988971
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtgggga 653  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  11988929 ctagtggctagattcacacacattatgtgtggagaagtgggga 11988971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 675
Target Start/End: Complemental strand, 32594671 - 32594610
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacc 675  Q
    |||||||||||||||||||| |||||||||||   |||||| |||| ||||||||||||||||||    
T  32594671 ctagtggctagattcacacatattatgtatgg---agtgggaaattcggggttcgaaccccgacc 32594610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 33223874 - 33223912
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33223874 ttagctcagttggtagaaacaatgcataatatatgcaag 33223912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 621 - 672
Target Start/End: Complemental strand, 55009622 - 55009571
Alignment:
Q  621 gattcacacacattatgtatggagaagtggggaatttggggttcgaaccccg 672  Q
    ||||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  55009622 gattcacacacattatgtatggagaagtgagaaatccggggttcgaaccccg 55009571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 7232239 - 7232201
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  7232239 ttaggtcagttggtagaaacaatgcataatatatgcaag 7232201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 618 - 668
Target Start/End: Original strand, 21177040 - 21177090
Alignment:
Q  618 ctagattcacacacattatgtatggagaagtggggaatttggggttcgaac 668  Q
    ||||||| ||||||||||||| ||||||||||||||||| | |||||||||    
T  21177040 ctagatttacacacattatgtgtggagaagtggggaattcgaggttcgaac 21177090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 2662095 - 2662136
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  2662095 agtttagctcagttggtaaagacaatgcataatatatgcaag 2662136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 6757352 - 6757275
Alignment:
Q  606 atagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||||||||||| ||||||||||||| |||| ||||| | ||| | |||||| |||| | ||| |||||||    
T  6757352 atagcctagtggctagatttacacacattatgtgtggaaaagtgagaaatctagggttcaaacctcaaccactgcaca 6757275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Original strand, 35381811 - 35381860
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatt 656  Q
    |||||||||| |||||||||||| |||||||| || ||||||||||||||    
T  35381811 tagcctagtgactagattcacacgcattatgtgtgaagaagtggggaatt 35381860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 39100142 - 39100101
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  39100142 agtttagctcagttgttataaacaatgcataatatatgcaag 39100101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 8113617 - 8113553
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||   |||||||||||||||||||||| |||  |||| ||||||| ||||||    
T  8113617 ttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaatcccggccacca 8113553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 10922359 - 10922299
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||  |||||||||||||||||||||| |||  ||||||| |||||| ||||    
T  10922359 ctcagttggtagggacaatgcataatatatgcaagatccggggttcaaaccccgactacca 10922299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 22722408 - 22722472
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||| |||  |||||||||||| |||||||||  |||| ||||||| |||||||||||    
T  22722408 ttagctcagttagtatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgaccacca 22722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 683
Target Start/End: Original strand, 27100918 - 27100982
Alignment:
Q  619 tagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||| | ||||||||||| |||| ||||||| ||| ||| ||||||||||||| |||||||||    
T  27100918 tagatttaaacacattatgtgtggaaaagtgggaaatctggagttcgaaccccgatccctgcaca 27100982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 647 - 687
Target Start/End: Original strand, 31982771 - 31982811
Alignment:
Q  647 gtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  31982771 gtggagaatttggggttcgaaccccgacccctgtacataat 31982811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 34899103 - 34899167
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||| ||||  |||||||||||||||||||||  |||  ||||||| |||||||||||    
T  34899103 ttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 524
Target Start/End: Original strand, 10440695 - 10440754
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||| |||||||||||||||||||||   ||| |||| ||| ||||||||||    
T  10440695 tcagttggtagagacaatgcataatatatgcaaggtacgaggttcgaattccgaccacca 10440754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 687
Target Start/End: Original strand, 12111037 - 12111112
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    |||||||||||||||  |||||||||  ||||||| ||| |||| |||||||| |||||| |||| | ||||||||    
T  12111037 tagtggctagattcattcacattatgcgtggagaaatggagaatctggggttcaaaccccaacccttacacataat 12111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 714
Target Start/End: Complemental strand, 17002996 - 17002906
Alignment:
Q  621 gattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagctac 714  Q
    |||||||||||||||||| ||||||||||||||||     |||||||||||  |||||| ||| | |||| || ||||||| ||||| ||||||    
T  17002996 gattcacacacattatgtgtggagaagtggggaat---ccgttcgaaccccagcccctgtacaaattatccctggtagctaccaactgagctac 17002906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 671
Target Start/End: Original strand, 36786572 - 36786631
Alignment:
Q  613 agtggctagattcacacacattatgtatggagaag-tggggaatttggggttcgaacccc 671  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||  | ||||||||||||    
T  36786572 agtggctagattcacacatattatgtgtggagaagttggggaatccgaggttcgaacccc 36786631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Original strand, 39216357 - 39216396
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  39216357 ttagctcagttggtagagaaaatgcataatatatgcaaga 39216396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 2078250 - 2078284
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||| |||||||||||||||||||||    
T  2078250 ctcagttggtagagacaatgcataatatatgcaag 2078284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 3177024 - 3176990
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||||||||||||||||||||||    
T  3177024 ctcagttggtaggaacaatgcataatatatgcaag 3176990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 3755341 - 3755383
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||| ||||||||  |||||||||||||||||||||    
T  3755341 gagtttagctcggttggtagggacaatgcataatatatgcaag 3755383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 5428495 - 5428453
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||| || |||||||||||||||||||||||    
T  5428495 gagtttagctcaattgataaaaacaatgcataatatatgcaag 5428453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 6901509 - 6901471
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  6901509 ttagctcagttggtaggaacaatgtataatatatgcaag 6901471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 7202975 - 7202933
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||| | |||||||||||| |||||||||    
T  7202975 gagtttagctcagttggttggaacaatgcataaaatatgcaag 7202933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 13800673 - 13800711
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  13800673 ttagctcagttggtaagaacaatgcataatatatgcaag 13800711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 18870780 - 18870742
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  18870780 ttagctcagttggtagggacaatgcataatatatgcaag 18870742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 25728004 - 25727958
Alignment:
Q  478 acaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||    
T  25728004 acaatgcataatatatgcaaggtccggggttcaaatcccgaccacca 25727958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 43345066 - 43345024
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||  |||||| |||||||||||||||    
T  43345066 gagtttagctcagttggtatgaacaatacataatatatgcaag 43345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 43490472 - 43490434
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  43490472 ttagctcagttggtatgaacaatgcataatatatgcaag 43490434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 45431954 - 45431992
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  45431954 ttagctcagttggtagggacaatgcataatatatgcaag 45431992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 522
Target Start/End: Complemental strand, 48315079 - 48315017
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccac 522  Q
    |||||||||||||||   | |||||||||||||||||||  |||  |||||||||||||||||    
T  48315079 ttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaatcccgaccac 48315017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 50570244 - 50570206
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  50570244 ttagctcagttggtatagacaatgcataatatatgcaag 50570206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 54230158 - 54230116
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  54230158 gagtttagctcagttggtaaggacaatgcataatatatgcaag 54230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 497
Target Start/End: Complemental strand, 1757720 - 1757687
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||| |||||||||||||||||||||    
T  1757720 ctcagttggtaggaacaatgcataatatatgcaa 1757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 7868728 - 7868765
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||  |||||||||||||||||||||    
T  7868728 ttagctcagttggtaagaacaatgcataatatatgcaa 7868765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 8174273 - 8174314
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||| |||||  ||||||||||||||    
T  8174273 agtttagctcagttggtagagacaatatataatatatgcaag 8174314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 24120476 - 24120423
Alignment:
Q  460 ttagctcagttggtagaaacaa-tgcataatatatgcaagacccgatgttcaaa 512  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||  |||||||    
T  24120476 ttagctcagttggtagagacaaatgcataatatatgcaagatccgcggttcaaa 24120423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 517
Target Start/End: Complemental strand, 35126328 - 35126267
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccg 517  Q
    ||||||| ||||||||||||  | |||||||||||||||||||| | |  ||||||||||||    
T  35126328 gagtttaactcagttggtagggataatgcataatatatgcaagatctggggttcaaatcccg 35126267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 35492799 - 35492836
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||  |||||||||||||||||||||    
T  35492799 ttagctcagttggtaagaacaatgcataatatatgcaa 35492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 35548346 - 35548305
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||  ||||||| ||||||||||||||    
T  35548346 agtttagctcagttggtatgaacaatgtataatatatgcaag 35548305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 38869573 - 38869524
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttc 509  Q
    |||||||||||||||  ||||||||||||||||| ||||| |||| ||||    
T  38869573 ttagctcagttggtaagaacaatgcataatatatacaagatccgaggttc 38869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 494
Target Start/End: Original strand, 53852738 - 53852775
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatg 494  Q
    |||||||||||||||| | |||||||||||||||||||    
T  53852738 agtttagctcagttggcataaacaatgcataatatatg 53852775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 8e-26; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 611 - 715
Target Start/End: Original strand, 13538253 - 13538357
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||| |||| | |||||||  |||||| ||||| ||    
T  13538253 ctagtggctagattcacacacattatgtatggagaagtgggaaatttggggttcgaactccagcccctacacaaattatctctgatagctaccaactgag 13538352  T
Q  711 ctaca 715  Q
    |||||    
T  13538353 ctaca 13538357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 611 - 715
Target Start/End: Original strand, 31351671 - 31351775
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    |||||||||||||||||||| ||||||| ||||||| |||| |||  || ||||||||||||||||||||||| | ||||||| ||||||| ||||| ||    
T  31351671 ctagtggctagattcacacatattatgtgtggagaaatgggaaatccggagttcgaaccccgacccctgcacaaattatctctggtagctaccaactgag 31351770  T
Q  711 ctaca 715  Q
    |||||    
T  31351771 ctaca 31351775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 601 - 715
Target Start/End: Original strand, 25273057 - 25273170
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagct 700  Q
    ||||||||| ||||||| ||||||| |||| ||||| ||||||||||||||||| |  | ||||||||||  |||||||||||||||||| || ||||||    
T  25273057 gtcagatagtctagtggttagattcgcacatattatatatggagaagtggggaa-tccgagttcgaaccctaacccctgcacataatatccctagtagct 25273155  T
Q  701 atcaactaagctaca 715  Q
    ||||||| |||||||    
T  25273156 atcaactgagctaca 25273170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 607 - 713
Target Start/End: Original strand, 35010377 - 35010483
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| |||  || |||||||||||||| |||||||| | |||||||  |||||| ||||    
T  35010377 tagcatagtggctagattcatacacattatgtgtggagaagtgggaaatccggagttcgaaccccgactcctgcacaaattatctctgatagctaccaac 35010476  T
Q  707 taagcta 713  Q
    | |||||    
T  35010477 tgagcta 35010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 614 - 707
Target Start/End: Original strand, 35130612 - 35130705
Alignment:
Q  614 gtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaact 707  Q
    |||||||||||||||||||| |||| || ||||||||| |||  ||||||||||||||| |||||||||| | ||||||| ||||||| |||||    
T  35130612 gtggctagattcacacacataatgtgtgaagaagtgggaaatccggggttcgaaccccggcccctgcacaaattatctctggtagctaccaact 35130705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 612 - 715
Target Start/End: Original strand, 38415494 - 38415597
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttg-tagctatcaactaag 710  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||| || |||| ||||||| | |||| |||| |||||| ||||| ||    
T  38415494 tagtggctagattcacacacattatgtatgaagaaatggagaatttggggttcgaatcctgacctctgcacaaattatc-cttgatagctaccaactgag 38415592  T
Q  711 ctaca 715  Q
    |||||    
T  38415593 ctaca 38415597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 607 - 683
Target Start/End: Original strand, 50263984 - 50264060
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||  ||| ||||| ||||| ||||||||||    
T  50263984 tagcctagtggctagattcacacacatcatgtgtggagaagtggggaatccgggtttcgagccccggcccctgcaca 50264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 617 - 715
Target Start/End: Original strand, 28091333 - 28091431
Alignment:
Q  617 gctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagctaca 715  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| | | ||||||| | | |||| ||  |||||| ||||| |||||||    
T  28091333 gctagattcacacacattatgtgtggagaagtggggaatttggagttcgaacctcaatccctgcataaattatcactgatagctaccaactgagctaca 28091431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 612 - 717
Target Start/End: Complemental strand, 9460270 - 9460166
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||| |||| || ||||||||| |||| |||| | |||||||  |||||| ||||||||     
T  9460270 tagtggctatattcacacacattatgtgtggagaaatggggaatatgggatttgaaccccga-ccctacacaaattatctctgatagctaccaactaagt 9460172  T
Q  712 tacatt 717  Q
    ||||||    
T  9460171 tacatt 9460166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 610 - 706
Target Start/End: Original strand, 3746384 - 3746479
Alignment:
Q  610 cctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    ||||| ||||||||| ||||||||||| | ||||||| |||| |||  |||||||||||| | |||||| |||||||||||||| ||||||| ||||    
T  3746384 cctagcggctagatttacacacattatatgtggagaaatgggaaatccggggttcgaacctc-acccctacacataatatctctggtagctaccaac 3746479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 679
Target Start/End: Complemental strand, 39691572 - 39691500
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctg 679  Q
    ||||||||||||| ||||||||||| ||| | |||||||||||||||||  |||| |||||||||| ||||||    
T  39691572 tagcctagtggctggattcacacactttaagcatggagaagtggggaatccggggatcgaaccccggcccctg 39691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 681
Target Start/End: Original strand, 45333451 - 45333522
Alignment:
Q  612 tagtggctagattcacacacattat--gtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| |||||| ||||||| ||| |||||    
T  45333451 tagtggctagattcacacacattatatgtgtggagaagtggggaattcggggtttgaaccccaacctctgca 45333522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 681
Target Start/End: Original strand, 45341141 - 45341212
Alignment:
Q  612 tagtggctagattcacacacattat--gtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| |||||| ||||||| ||| |||||    
T  45341141 tagtggctagattcacacacattatatgtgtggagaagtggggaattcggggtttgaaccccaacctctgca 45341212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 612 - 715
Target Start/End: Complemental strand, 42657611 - 42657508
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    |||||| || ||||||||||||||||| || |||||||| |||| |||||||||||| |||||||||  | | | |||||||  |||||| ||||| |||    
T  42657611 tagtggttaaattcacacacattatgtgtgaagaagtggagaatgtggggttcgaactccgacccctatataaattatctctgatagctaccaactgagc 42657512  T
Q  712 taca 715  Q
    ||||    
T  42657511 taca 42657508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 611 - 678
Target Start/End: Complemental strand, 49479566 - 49479499
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccct 678  Q
    ||||||| |||||||||||||||||||| ||||||||| || |||| ||| |||||||||| ||||||    
T  49479566 ctagtggttagattcacacacattatgtgtggagaagttggaaattcgggattcgaacccctacccct 49479499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 8494993 - 8495057
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga-cccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  8494993 ttagctcagttggtagggacaatgcataatatatgcaagatcccga-gttcaaatcccggccacca 8495057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 612 - 681
Target Start/End: Complemental strand, 10601975 - 10601906
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    ||||||| | ||||||||| ||||||| | |||||||||||||| |||||||| ||||||||||| ||||    
T  10601975 tagtggccatattcacacatattatgtgtagagaagtggggaatctggggttcaaaccccgacccttgca 10601906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 38438367 - 38438435
Alignment:
Q  615 tggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||| ||| ||||| || | ||||||||    
T  38438367 tggctagattcatacacattatgtttggagaagtgggaaatttggagtttgaacctcggctcctgcaca 38438435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 499
Target Start/End: Complemental strand, 45970758 - 45970723
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||||||||||||||||||||    
T  45970758 ctcagttggtagaaacaatgcataatatatgcaaga 45970723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 525
Target Start/End: Original strand, 18004470 - 18004536
Alignment:
Q  459 tttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||||||||  || ||||||||||||||| |||| |||| |||||||  |||||||||||    
T  18004470 tttagctcagttggtaagaataatgcataatatatgtaagatccgacgttcaaactccgaccaccat 18004536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 21317393 - 21317355
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  21317393 ttagctcagttggtagagacaatgcataatatatgcaag 21317355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 2649791 - 2649750
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  2649791 agtttagctcagttggtagggacaatgcataatatatgcaag 2649750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 525
Target Start/End: Complemental strand, 22630411 - 22630350
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||||  |||||||||||||||||||||  | || ||||||| ||||||||||||    
T  22630411 ctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccat 22630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 521
Target Start/End: Complemental strand, 40071019 - 40070962
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgacca 521  Q
    |||||||||||  ||||||||||||||||||||||  |||| ||||||| ||||||||    
T  40071019 ctcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 836290 - 836226
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||  |||||||| ||||||||||||  |||| |||||||  ||||||||||    
T  836290 ttagctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgaccacca 836226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 685
Target Start/End: Original strand, 2832091 - 2832131
Alignment:
Q  645 aagtggggaatttggggttcgaaccccgacccctgcacata 685  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  2832091 aagtggggtgtttggggttcgaaccccgacccctgcacata 2832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 675
Target Start/End: Complemental strand, 7921694 - 7921630
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacc 675  Q
    |||||||||| |||||||||||| |||| |||||||||| |||||  || ||| |||||||||||    
T  7921694 ctagtggctaaattcacacacatgatgtgtggagaagtgaggaatccggcgtttgaaccccgacc 7921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 8027456 - 8027388
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||||||   | |||||||||||||||||||| | |  ||||||| |||||||||||    
T  8027456 gagtttagctcagttggtaaggataatgcataatatatgcaagatcgggggttcaaaccccgaccacca 8027388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 11949818 - 11949754
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||   |||||||||||||||||||||  |||  ||||||| |||||||||||    
T  11949818 ttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 11949754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 12671807 - 12671739
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||||| | ||||||||||| |||||||||| |||  |||| || | |||||||||    
T  12671807 gagtttagctcagttggtatagacaatgcataaaatatgcaagatccggggttcgaacctcgaccacca 12671739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 683
Target Start/End: Original strand, 17882243 - 17882313
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||| ||||||||||||| ||||||||| | ||||  ||||||||||||| | ||||||||||    
T  17882243 ctagtggctagatttacacacattatgt-tggagaagtagagaatccggggttcgaaccctg-cccctgcaca 17882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 22164328 - 22164260
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||| ||||||||| |||||||||||||||||| |||  | |  ||||||| |||||||||||    
T  22164328 gagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 612 - 681
Target Start/End: Original strand, 26336848 - 26336919
Alignment:
Q  612 tagtggctagattcacacacat--tatgtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    ||||||||||||||||||||||  ||||| ||||||| ||||||||| |||||| |||| || ||| |||||    
T  26336848 tagtggctagattcacacacattatatgtgtggagaactggggaattcggggtttgaactccaacctctgca 26336919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 715
Target Start/End: Original strand, 40981780 - 40981888
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaac 706  Q
    ||||||||||| |||||| || |||||||||| ||||||||||| |||| || | ||| ||| ||||||||| || | | |||| ||  |||||| ||||    
T  40981780 tagcctagtggttagatttacgcacattatgtgtggagaagtggagaatctgagattcaaactccgacccctacataaattatccctgctagctaccaac 40981879  T
Q  707 taagctaca 715  Q
    | |||||||    
T  40981880 tgagctaca 40981888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 56551647 - 56551583
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||   |||||||||||||||||||||  |||| ||||||| |||| ||||||    
T  56551647 ttagctcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaaccccggccacca 56551583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Original strand, 23154600 - 23154639
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  23154600 ttagctcagttggttgaaacaatgcataaaatatgcaaga 23154639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 670
Target Start/End: Original strand, 23894283 - 23894342
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccc 670  Q
    |||||||  ||||||||||||||||||||| ||||||| || ||| || |||||||||||    
T  23894283 ctagtggtcagattcacacacattatgtatagagaagtaggaaatctgaggttcgaaccc 23894342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 38812908 - 38812865
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||| |||||  ||||||||||||||||||||||    
T  38812908 gagtttagctcagtcggtagggacaatgcataatatatgcaaga 38812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 655
Target Start/End: Original strand, 54733276 - 54733319
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||    
T  54733276 tagtggctagattcacacacattatgtgtggagaggtgaggaat 54733319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 3299153 - 3299111
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| ||||||||||  |||||||||||||||||||||||    
T  3299153 gagtttaactcagttggttaaaacaatgcataatatatgcaag 3299111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 3936633 - 3936671
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  3936633 ttagctcagttggtatgaacaatgcataatatatgcaag 3936671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 11286836 - 11286798
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  11286836 ttagttcagttggtagagacaatgcataatatatgcaag 11286798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 17423228 - 17423194
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||| |||||||||||||||||||||    
T  17423228 ctcagttggtagagacaatgcataatatatgcaag 17423194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 490
Target Start/End: Original strand, 18458754 - 18458788
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataata 490  Q
    ||||||| |||||||||||||||||||||||||||    
T  18458754 gagtttaactcagttggtagaaacaatgcataata 18458788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 20403223 - 20403185
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  20403223 ttagctcagttgataggaacaatgcataatatatgcaag 20403185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 20799449 - 20799411
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  20799449 ttagctcagttggtagggacaatgcataatatatgcaag 20799411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 27655737 - 27655775
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  27655737 ttagttcagttgatagaaacaatgcataatatatgcaag 27655775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 28031814 - 28031856
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||| | |||||||||||| |||||||||    
T  28031814 gagtttagctcagttggttggaacaatgcataaaatatgcaag 28031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 28435307 - 28435265
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  28435307 gagtttagctcagttggtatggacaatgcataatatatgcaag 28435265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 34247442 - 34247484
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  34247442 gagtttagctcagttggtaaggacaatgcataatatatgcaag 34247484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 36490592 - 36490638
Alignment:
Q  478 acaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||| ||||||||| |||  |||||||||||||||||||    
T  36490592 acaatgcataatgtatgcaagatccggggttcaaatcccgaccacca 36490638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 41520964 - 41520998
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||| |||||||||||||||||||||    
T  41520964 ctcagttggtagagacaatgcataatatatgcaag 41520998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 612 - 671
Target Start/End: Original strand, 42721498 - 42721559
Alignment:
Q  612 tagtggctagattcacacacat--tatgtatggagaagtggggaatttggggttcgaacccc 671  Q
    ||||||||||||||||||||||  ||||| |||||||||||  |||||| |||| |||||||    
T  42721498 tagtggctagattcacacacattatatgtgtggagaagtggaaaatttgcggtttgaacccc 42721559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 50362194 - 50362156
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  50362194 ttagctcagttggtagggacaatgcataatatatgcaag 50362156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 494
Target Start/End: Original strand, 54500575 - 54500609
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||||||||| |||||||||||||||||    
T  54500575 ttagctcagttggtagagacaatgcataatatatg 54500609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 55430598 - 55430640
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| |||||||||||| || |||||||||||||||||||    
T  55430598 gagtttaactcagttggtaggaataatgcataatatatgcaag 55430640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 637 - 683
Target Start/End: Complemental strand, 55967864 - 55967818
Alignment:
Q  637 gtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||||||||  ||||||||||||||| ||||| ||||    
T  55967864 gtatggagaagtggggaatccggggttcgaaccccggcccctacaca 55967818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 650
Target Start/End: Original strand, 1939999 - 1940032
Alignment:
Q  617 gctagattcacacacattatgtatggagaagtgg 650  Q
    ||||||||||||||| ||||||||||||||||||    
T  1939999 gctagattcacacactttatgtatggagaagtgg 1940032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 681
Target Start/End: Complemental strand, 2629662 - 2629621
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  2629662 tggagaagtggggtgttcggggttcgaaccccgacccctgca 2629621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 13578452 - 13578501
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  |  |||||||||||||||||||||||| |||||||    
T  13578452 tggagaagtggggtgtccggggttcgaaccccgacccctgcatataatat 13578501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 14577566 - 14577525
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  14577566 gagtttagctcagttggtaaggacaatgcataatatatgcaa 14577525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 16304156 - 16304115
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  16304156 agtttagctcagttggtatggacaatgcataatatatgcaag 16304115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 525
Target Start/End: Complemental strand, 19479532 - 19479467
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    |||||||||||  ||  ||||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  19479532 ttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccat 19479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 23778812 - 23778861
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  | ||||||||||||||| ||||||||| |||||||    
T  23778812 tggagaagtggggtgtctggggttcgaaccccaacccctgcatataatat 23778861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 42198631 - 42198594
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  42198631 ttagctcagttggtataaacaatgcataaaatatgcaa 42198594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 47890778 - 47890729
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||| |  | ||||||||||||||||||||||||| |||||||    
T  47890778 tggagaagtggagtgtctggggttcgaaccccgacccctgcatataatat 47890729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 605 - 683
Target Start/End: Original strand, 6922626 - 6922704
Alignment:
Q  605 gatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||||||||||||||    
T  6922626 gatagcctagtggctagattcacacacattatatgtggagaagtggggaatctggagtttgaaccccgacccctgcaca 6922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 611 - 707
Target Start/End: Original strand, 7326329 - 7326425
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaact 707  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||| || | |||| || ||||||| |||||    
T  7326329 ctagtggctaaattcacacacattatgtgtggagaagtggggaatctagggttcgaaacccgacccctgctcaaattatccctggtagctaccaact 7326425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 601 - 715
Target Start/End: Original strand, 20599383 - 20599494
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagct 700  Q
    ||||||||| ||||||| |||| ||||||   |||||| ||||||||||||||||  ||||||| ||||||||||| ||||||||||||| || ||||||    
T  20599383 gtcagatagtctagtggttagactcacac---ttatgtgtggagaagtggggaatccggggttcaaaccccgacccttgcacataatatccctggtagct 20599479  T
Q  701 atcaactaagctaca 715  Q
    | ||||| |||||||    
T  20599480 accaactgagctaca 20599494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 612 - 715
Target Start/End: Complemental strand, 12606759 - 12606656
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    ||||||||||||||||||||||||| | || ||||||||||||| ||||||||||||| |||  ||| |||| | |||| || ||||||| ||||| |||    
T  12606759 tagtggctagattcacacacattatatgtgaagaagtggggaatctggggttcgaacctcgattcctacacaaattatccctagtagctaccaactgagc 12606660  T
Q  712 taca 715  Q
    ||||    
T  12606659 taca 12606656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 610 - 655
Target Start/End: Complemental strand, 5925692 - 5925647
Alignment:
Q  610 cctagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  5925692 cctagtggctagattcacacacattatgtgtgaagaagtggggaat 5925647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 8809308 - 8809373
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgacca 521  Q
    |||||||| ||| ||| || |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  8809308 gagtttagttcaattgataaaaacaatgcataatatatgcaagatccgaggttcaaaccccgacca 8809373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 612 - 717
Target Start/End: Original strand, 24618960 - 24619064
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    |||||||||  |||||||||||||| |||||||||||  |||| ||||||||||||| ||| || ||||| | | ||||| | ||||||| ||||| |||    
T  24618960 tagtggctacgttcacacacattatatatggagaagt-aggaaattggggttcgaactccggccactgcataaattatctttagtagctaccaactgagc 24619058  T
Q  712 tacatt 717  Q
    ||||||    
T  24619059 tacatt 24619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 29045867 - 29045831
Alignment:
Q  619 tagattcacacacattatgtatggagaagtggggaat 655  Q
    |||||||||||||||||||||||||||||||||||||    
T  29045867 tagattcacacacattatgtatggagaagtggggaat 29045831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 32193918 - 32193858
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatccc 516  Q
    |||||||||||||||||||  ||||||||||||||||||||||   ||| |||||||||||    
T  32193918 gagtttagctcagttggtaagaacaatgcataatatatgcaaggtacgaggttcaaatccc 32193858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 649
Target Start/End: Complemental strand, 7339609 - 7339567
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtg 649  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  7339609 tagcctagtggctagattcacacacattatgtgtgaagaagtg 7339567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 667
Target Start/End: Original strand, 21023674 - 21023740
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaa 667  Q
    |||| |||| |||||| | ||||||||||||||||||| ||||||||||| ||||  ||||||||||    
T  21023674 gtcaaatagtctagtgacaagattcacacacattatgtgtggagaagtggagaatccggggttcgaa 21023740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 30639485 - 30639443
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  30639485 gagtttagctcagttggtaggaataatgcataatatatgcaag 30639443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 8177022 - 8176951
Alignment:
Q  610 cctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgca 681  Q
    ||||||||||| ||||| ||||||||||| ||||||||||| ||||| | ||||| |||  ||| |||||||    
T  8177022 cctagtggctaaattcatacacattatgtgtggagaagtggagaattcgaggttcaaacatcgatccctgca 8176951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 689
Target Start/End: Original strand, 10913064 - 10913115
Alignment:
Q  638 tatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    ||||||||||||| |  | ||||||||||||||||||||||||| |||||||    
T  10913064 tatggagaagtggagtgtctggggttcgaaccccgacccctgcatataatat 10913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 655
Target Start/End: Original strand, 24896868 - 24896911
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||    
T  24896868 tagtggctaaattcacacacattatgtgtggtgaagtggggaat 24896911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 331937 - 331903
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||| |||||||||||||||||||||    
T  331937 ctcagttggtagagacaatgcataatatatgcaag 331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 866344 - 866302
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||||  || ||||||||||||||||||    
T  866344 gagtttagctcagttggtaggcacgatgcataatatatgcaag 866302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 1918517 - 1918475
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  1918517 gagtttaactcagttggtatagacaatgcataatatatgcaag 1918475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Original strand, 2105907 - 2105945
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  2105907 gagtttagctcggttggtaaaaacaatgcataatatatg 2105945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 601 - 667
Target Start/End: Original strand, 2994773 - 2994839
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaa 667  Q
    |||| ||||| |||||||||| ||||||| | |||||| |||| ||||||||||| || ||||||||    
T  2994773 gtcaaatagcttagtggctagtttcacacgctttatgtgtggataagtggggaatctgaggttcgaa 2994839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 10780162 - 10780124
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  10780162 ttagctcagttggtagggacaatgcataatatatgcaag 10780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 15187087 - 15187133
Alignment:
Q  478 acaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacca 15187133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 15473519 - 15473473
Alignment:
Q  478 acaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccacca 15473473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 21936092 - 21936050
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||  |||||| |||||||||||||||    
T  21936092 gagtttagctcagttggtaagaacaattcataatatatgcaag 21936050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 24373769 - 24373727
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  24373769 gagtttaactcaattggtagagacaatgcataatatatgcaag 24373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 32149144 - 32149182
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32149144 ttagctcagttggtaagaacaatgcataatatatgcaag 32149182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 33938734 - 33938696
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  33938734 ttagctcagttggtatgaacaatgcataatatatgcaag 33938696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 34701153 - 34701191
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  34701153 ttagttcagttggtaggaacaatgcataatatatgcaag 34701191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 12069 - 12028
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||| |||| | ||||||||||||||||||    
T  12069 gagtttagctcagttgatagagataatgcataatatatgcaa 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 686
Target Start/End: Complemental strand, 5544351 - 5544310
Alignment:
Q  645 aagtggggaatttggggttcgaaccccgacccctgcacataa 686  Q
    |||||||| || ||||||||||||||||||||||||| ||||    
T  5544351 aagtggggtatctggggttcgaaccccgacccctgcatataa 5544310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 8637497 - 8637440
Alignment:
Q  455 cgagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaa 512  Q
    |||| |||| |||||||||||  |||||||||||||||||||||  |||| |||||||    
T  8637497 cgagcttagttcagttggtagggacaatgcataatatatgcaaggtccgaggttcaaa 8637440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 12276286 - 12276249
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||  |||||||||||||||||||||    
T  12276286 ttagctcagttggtaagaacaatgcataatatatgcaa 12276249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 686
Target Start/End: Complemental strand, 18631547 - 18631506
Alignment:
Q  645 aagtggggaatttggggttcgaaccccgacccctgcacataa 686  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  18631547 aagtggggtatttggggttcgaatcccgacccctgcatataa 18631506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Original strand, 29457183 - 29457220
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatat 493  Q
    |||||||||||||||||||| || ||||||||||||||    
T  29457183 gagtttagctcagttggtaggaaaaatgcataatatat 29457220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 8e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 612 - 715
Target Start/End: Complemental strand, 30327764 - 30327661
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| | | |||||||  |||||| ||||| |||    
T  30327764 tagtggctagattcacacatattatgtgtggagaagtggcgaattcggggttcgaaccccggcccctgcataaattatctctgatagctaccaactgagc 30327665  T
Q  712 taca 715  Q
    ||||    
T  30327664 taca 30327661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 8032970 - 8032897
Alignment:
Q  610 cctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||| ||| |||||||||||    
T  8032970 cctagtggctaaattcacacacattatgtgtggagatgtggagaatttggggttcgaatcccaacccctgcaca 8032897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 707
Target Start/End: Complemental strand, 24793584 - 24793488
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaact 707  Q
    |||||||||||||||||| ||||||||| | ||||| |||| ||| ||||||||| ||||||||||||||||| | |||||||  |||||| |||||    
T  24793584 ctagtggctagattcacatacattatgtgtagagaaatgggaaatctggggttcggaccccgacccctgcacaaattatctctgatagctaccaact 24793488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 32398319 - 32398247
Alignment:
Q  618 ctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatc 690  Q
    ||||||||||| ||||||||| ||||||||||||||||  |  |||||||||||||| |||||||||||||||    
T  32398319 ctagattcacatacattatgtgtggagaagtggggaatacgttgttcgaaccccgactcctgcacataatatc 32398247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 715
Target Start/End: Original strand, 43406002 - 43406106
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaag 710  Q
    ||||||| |||| ||||||||||||||| ||||||||||| |||| || ||||||||| |||  || |||||| | ||||||| ||||||| ||||| ||    
T  43406002 ctagtggttagactcacacacattatgtgtggagaagtggagaatctgaggttcgaactccggtccttgcacaaattatctctggtagctaccaactgag 43406101  T
Q  711 ctaca 715  Q
    |||||    
T  43406102 ctaca 43406106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 524
Target Start/End: Complemental strand, 20365531 - 20365464
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||||||||| | ||||||||||||||||| ||||| | | ||||||||||||| ||||||    
T  20365531 gagtttagctcagttggtcggaacaatgcataatatatacaagatctg-tgttcaaatcccggccacca 20365464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 611 - 707
Target Start/End: Complemental strand, 28282445 - 28282349
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaact 707  Q
    ||||||| |||||||||||| ||||||| |||||||||| |||||  | |||| ||| | |||||||| |||| | ||||||| ||||||| |||||    
T  28282445 ctagtggttagattcacacatattatgtgtggagaagtgaggaatacgaggtttgaatctcgacccctccacaaattatctctagtagctaccaact 28282349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 640 - 715
Target Start/End: Original strand, 28580439 - 28580514
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagctaca 715  Q
    |||||||||||||||| |||||||||||||| | | |||||| | | | ||||| ||||||||||||| |||||||    
T  28580439 tggagaagtggggaatctggggttcgaaccctggctcctgcaaacattgtctctggtagctatcaactgagctaca 28580514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 499
Target Start/End: Original strand, 1642341 - 1642379
Alignment:
Q  461 tagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  1642341 tagctcagttggtaaaaacaatgcataatatatgcaaga 1642379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 18489135 - 18489093
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  18489135 gagtttagctcagttggtatagacaatgcataatatatgcaag 18489093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 18538610 - 18538652
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  18538610 gagtttagctaagttggtagagacaatgcataatatatgcaag 18538652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 672
Target Start/End: Complemental strand, 15409262 - 15409201
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccg 672  Q
    |||||||||| ||||||||||||||||| |  ||||||||||||| |||| ||| |||||||    
T  15409262 ctagtggctaaattcacacacattatgtgtaaagaagtggggaatctgggattcaaaccccg 15409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 17861981 - 17862022
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  17861981 gagtttagctcagttggtagggacaatgcataatatatgcaa 17862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 27721730 - 27721693
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||| |||||||||||||||||||||    
T  27721730 ttagctcagttggtaggaacaatgcataatatatgcaa 27721693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 690
Target Start/End: Original strand, 4387763 - 4387831
Alignment:
Q  622 attcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatc 690  Q
    ||||||| |||||| ||  |||||| ||| |||||||||||||||||  ||||||| ||||||||||||    
T  4387763 attcacatacattaagtgaggagaaatggagaatttggggttcgaacttcgaccccggcacataatatc 4387831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 10917333 - 10917373
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  10917333 agtttaactcaattggtagaaacaatgcataatatatgcaa 10917373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 20927645 - 20927701
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatccc 516  Q
    |||||||||||||||   ||||| |||||||||||||||| |||| |||||||||||    
T  20927645 ttagctcagttggtatggacaatacataatatatgcaagatccgaggttcaaatccc 20927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Original strand, 34436857 - 34436921
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||  |||||||||||||||||||||  |||  ||||||| |||| ||||||    
T  34436857 ttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaaccccgcccacca 34436921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 496
Target Start/End: Complemental strand, 13150903 - 13150872
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatgca 496  Q
    ||||||||||||||||||||||||||||||||    
T  13150903 tcagttggtagaaacaatgcataatatatgca 13150872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 6489013 - 6489051
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  6489013 ttagctcagttggtagggacaatgcataatatatgcaag 6489051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 11017178 - 11017220
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||||  | |||||||||||||||||||    
T  11017178 gagtttagctcagttggtagggataatgcataatatatgcaag 11017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 13409430 - 13409472
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||| ||| | |||||||||||||||||||||    
T  13409430 gagtttagctcagttagtaaagacaatgcataatatatgcaag 13409472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 15889417 - 15889455
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  15889417 ttagctcagttggtagggacaatgcataatatatgcaag 15889455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 18278318 - 18278276
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| |||||||||||  ||||||||||||||||||||||    
T  18278318 gagtttaactcagttggtaagaacaatgcataatatatgcaag 18278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 18789042 - 18789080
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  18789042 ttagctcagttggtagagacaatgcataaaatatgcaag 18789080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 465 - 499
Target Start/End: Original strand, 20206526 - 20206560
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||| ||||||||||||||||||||||    
T  20206526 tcagttggtagagacaatgcataatatatgcaaga 20206560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 27903115 - 27903157
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||| ||||||||||  ||||||||||||||||||||||    
T  27903115 gagtttagttcagttggtatgaacaatgcataatatatgcaag 27903157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 29962364 - 29962402
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  29962364 ttagctcagttgatagaaacaatgtataatatatgcaag 29962402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 30012434 - 30012396
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  30012434 ttagctcagttgatagaaacaatgtataatatatgcaag 30012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 31591592 - 31591554
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  31591592 ttagctcagttggtaggaacaatgcatattatatgcaag 31591554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 31602880 - 31602842
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  31602880 ttagctcagttggtatgaacaatgcataatatatgcaag 31602842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 34206229 - 34206271
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| ||||||||||| | |||||||||||||||||||||    
T  34206229 gagtttaactcagttggtaaagacaatgcataatatatgcaag 34206271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 37614482 - 37614444
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  37614482 ttagctcagttggtagagacaacgcataatatatgcaag 37614444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 37791218 - 37791180
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  37791218 ttagttcagttggtagaaacaacgcataatatatgcaag 37791180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 1669635 - 1669598
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||  |||||||||||||||||||||    
T  1669635 ttagctcagttggtaagaacaatgcataatatatgcaa 1669598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 5002015 - 5002052
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtg 649  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  5002015 tagtggctaaattcacacacattgtgtatggagaagtg 5002052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 525
Target Start/End: Complemental strand, 5107296 - 5107235
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    |||||||||||  || |||||||||||||||||||  |||| |||| || ||||||||||||    
T  5107296 ctcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaaccccgaccaccat 5107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 5485192 - 5485229
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  5485192 ttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 19248485 - 19248522
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  19248485 ttagctcagttggtatagacaatgcataatatatgcaa 19248522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 37054328 - 37054291
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatat 493  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  37054328 gagtttagctcagttggtagggacaatgcataatatat 37054291  T

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Target: scaffold0166 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 707
Target Start/End: Complemental strand, 35967 - 35871
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaact 707  Q
    |||||||||||||||||| ||||||||| | ||||| |||| ||| ||||||||| ||||||||||||||||| | |||||||  |||||| |||||    
T  35967 ctagtggctagattcacatacattatgtgtagagaaatgggaaatctggggttcggaccccgacccctgcacaaattatctctgatagctaccaact 35871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 611 - 683
Target Start/End: Complemental strand, 37123666 - 37123594
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| ||||| |||| ||||    
T  37123666 ctagtggctagattcacacacattatgtgtggagaagtgagaaatttggggttcgaatcccgaaccctacaca 37123594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 612 - 678
Target Start/End: Original strand, 14368415 - 14368481
Alignment:
Q  612 tagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccct 678  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||| ||||||    
T  14368415 tagtggctagattcacacacattatgtgtggagaagtggggaatccgtggttcgaaccccaacccct 14368481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 611 - 676
Target Start/End: Complemental strand, 8915674 - 8915609
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgaccc 676  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||| ||||    
T  8915674 ctagtggctagattcacacacattatttatggagaagtggggaatccggggtacgaaccccaaccc 8915609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 607 - 683
Target Start/End: Complemental strand, 44287905 - 44287829
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||  || ||||||| ||| ||| |||||||    
T  44287905 tagcctattggctagattcacacacattatgtgtggagaagtggggaatccggagttcgaatcccaacctctgcaca 44287829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 715
Target Start/End: Original strand, 9198925 - 9199032
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaacccc-gacccctgcacataatatctcttgtagctatcaa 705  Q
    |||||| ||||||| |||||||  |||||||| |||||||||||| |||| | |||||||||||| | || ||||||| | ||||||| ||||||| |||    
T  9198925 tagcctcgtggctaaattcaca--cattatgtgtggagaagtgggaaattcgaggttcgaaccccagcccgctgcacaaattatctctggtagctaccaa 9199022  T
Q  706 ctaagctaca 715  Q
    || |||||||    
T  9199023 ctgagctaca 9199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 18782599 - 18782557
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  18782599 gagtttagctaagttggtagaaacaatgcataatatatgcaag 18782557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 683
Target Start/End: Original strand, 31068881 - 31068963
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcaca 683  Q
    |||| |||| ||||||| ||||||||||||||||| || ||||||||||||||||  || |||| ||| ||||||||| ||||    
T  31068881 gtcaaatagtctagtggttagattcacacacattaagtgtggagaagtggggaatccggagttcaaactccgacccctacaca 31068963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 687
Target Start/End: Complemental strand, 44831526 - 44831440
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataat 687  Q
    |||| ||| |||||||||||||||||||  ||||||||||| | || |||| ||| || |||| ||||||||||| |||||||||||    
T  44831526 gtcaaataacctagtggctagattcacatgcattatgtatgaaaaaatgggaaatctgtggtttgaaccccgacctctgcacataat 44831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 619 - 711
Target Start/End: Original strand, 9932020 - 9932112
Alignment:
Q  619 tagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatatctcttgtagctatcaactaagc 711  Q
    |||||||||||||||||| | ||||||||||||||||  ||||||||||  ||| || ||| ||| | |||| |||||||||| || ||||||    
T  9932020 tagattcacacacattatatgtggagaagtggggaatccggggttcgaattccggccactgtacaaattatcccttgtagctaccacctaagc 9932112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 25395493 - 25395433
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||| ||||||||||||||||||||||   | | |||||||||||||||||||    
T  25395493 ctcagttggtaggaacaatgcataatatatgcaaggttcaaggttcaaatcccgaccacca 25395433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 672
Target Start/End: Original strand, 23948696 - 23948758
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaaccccg 672  Q
    ||||||||||||| ||||||||||||||||||   | ||||||||||||  |||||||||||||||    
T  23948696 tagcctagtggcttgattcacacacattatgt---gtgaagtggggaatccggggttcgaaccccg 23948758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 3197138 - 3197096
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  3197138 gagtttagctcagttggtagggacaatgcataatatatgcaag 3197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 7206131 - 7206169
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  7206131 ttagctcagttggtagagacaatgcataatatatgcaag 7206169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 525
Target Start/End: Original strand, 20644009 - 20644075
Alignment:
Q  459 tttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||||||||  || ||||||||||||||| |||| |||| |||||||  |||||||||||    
T  20644009 tttagctcagttggtaagaataatgcataatatatgtaagatccgacgttcaaactccgaccaccat 20644075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 22608533 - 22608571
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  22608533 ttagctcagttggtagagacaatgcataatatatgcaag 22608571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 20565130 - 20565066
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||||||  |||||||||||||||||||||  |||  ||||||| ||| |||||||    
T  20565130 ttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccacca 20565066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 24581072 - 24581008
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    |||||||||||  || |||||||||||||||||||||||   ||| ||||||| |||||||||||    
T  24581072 ttagctcagttcataaaaacaatgcataatatatgcaaggttcgaggttcaaaccccgaccacca 24581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 27412887 - 27412827
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||| ||||||||||||||||| |||  | | |||||||| |||||||||||    
T  27412887 ctcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccacca 27412827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Complemental strand, 31815938 - 31815878
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccacca 524  Q
    ||||||||||||  |||||||||||||||||||||  |||  ||||||| |||||||||||    
T  31815938 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 31815878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 655
Target Start/End: Original strand, 34319813 - 34319857
Alignment:
Q  611 ctagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    |||||||||||||||||||||||||||| | |||||||| |||||    
T  34319813 ctagtggctagattcacacacattatgtgtagagaagtgaggaat 34319857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 651
Target Start/End: Original strand, 38690791 - 38690835
Alignment:
Q  607 tagcctagtggctagattcacacacattatgtatggagaagtggg 651  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||    
T  38690791 tagcctagtggctagattcacatacattatatgtggagaagtggg 38690835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 689
Target Start/End: Complemental strand, 4183293 - 4183210
Alignment:
Q  607 tagcctagtggctaga-ttcacacacattatgtatggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||||| ||||||||  |||  | ||||||||||| |  || ||||||||||||||||| |||||| |||||||    
T  4183293 tagcctagtggctagagttcacacaatttaattgtggagaagtggagtgttcggggttcgaaccccgactcctgcatataatat 4183210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 499
Target Start/End: Complemental strand, 7029446 - 7029407
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  7029446 ttagctcagttggtaaaaacaatacataatatatgcaaga 7029407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Original strand, 28771584 - 28771627
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  28771584 gagtttagctcagttggtaaggacaatgcataatatatgcaaga 28771627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 499
Target Start/End: Complemental strand, 30762554 - 30762511
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||    
T  30762554 gagtttagctcagttggtatagacaatgcataaaatatgcaaga 30762511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 495
Target Start/End: Original strand, 37984361 - 37984396
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgc 495  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37984361 ttagctcagttggtataaacaatgcataatatatgc 37984396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 494
Target Start/End: Complemental strand, 8727761 - 8727727
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||| |||||||||||||||||||||||    
T  8727761 ttagctcagttagtagaaacaatgcataatatatg 8727727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 612 - 659
Target Start/End: Complemental strand, 11997724 - 11997675
Alignment:
Q  612 tagtggctagattcacacacattatgta--tggagaagtggggaatttgg 659  Q
    |||| |||||||||||||||||||| ||  ||||||||||||||||||||    
T  11997724 tagtagctagattcacacacattatatatgtggagaagtggggaatttgg 11997675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 12124547 - 12124589
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  12124547 gagtttagctcagttggtaaggacaatgcataatatatgcaag 12124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 16221405 - 16221363
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||  |||||||||||| |||||||||    
T  16221405 gagtttagctcagttggtatgaacaatgcataaaatatgcaag 16221363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 494
Target Start/End: Original strand, 20517024 - 20517062
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatg 494  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  20517024 gagtttagctcagttggtaagaacaatgcataatatatg 20517062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Complemental strand, 24592901 - 24592863
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  24592901 ttagctcagttggtagggacaatgcataatatatgcaag 24592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 26999116 - 26999154
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  26999116 ttagttcagttggtagagacaatgcataatatatgcaag 26999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 499
Target Start/End: Complemental strand, 29133542 - 29133500
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||  |||||||||||| ||||||||||    
T  29133542 agtttagctcagttggtatgaacaatgcataaaatatgcaaga 29133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 29896353 - 29896311
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||  ||||||| ||||||||||||||||||||||||||    
T  29896353 gagtttaattcagttgatagaaacaatgcataatatatgcaag 29896311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 498
Target Start/End: Original strand, 30243256 - 30243294
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  30243256 ttagctcagttggtagagacaatgcataatatatacaag 30243294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 34464468 - 34464426
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  34464468 gagtttagctcagttggtatggacaatgcataatatatgcaag 34464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 35685120 - 35685078
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  35685120 gagtttagctcagttggtaaggacaatgcataatatatgcaag 35685078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 43117249 - 43117207
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  43117249 gagtttagctcagttggtaaggacaatgcataatatatgcaag 43117207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 690790 - 690831
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||||| ||| |||||| |||||||||||||    
T  690790 gagtttagctcagttggaagagacaatgtataatatatgcaa 690831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 13490727 - 13490768
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  13490727 gagtttagctcagttgatagagacaatgtataatatatgcaa 13490768  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 689
Target Start/End: Original strand, 17777150 - 17777199
Alignment:
Q  640 tggagaagtggggaatttggggttcgaaccccgacccctgcacataatat 689  Q
    |||||||||||||  |  |||||||||||||||||||||||| |||||||    
T  17777150 tggagaagtggggtgtccggggttcgaaccccgacccctgcatataatat 17777199  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 521
Target Start/End: Original strand, 29734693 - 29734758
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgacca 521  Q
    |||||||||||||||| ||   |||||||||||||||||||||  |||  ||||||| ||||||||    
T  29734693 gagtttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccgacca 29734758  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 30799138 - 30799109
Alignment:
Q  465 tcagttggtagaaacaatgcataatatatg 494  Q
    ||||||||||||||||||||||||||||||    
T  30799138 tcagttggtagaaacaatgcataatatatg 30799109  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 35451298 - 35451261
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  35451298 ttagctcagttggtagagacaatacataatatatgcaa 35451261  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 41668661 - 41668698
Alignment:
Q  460 ttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||  |||||||||||||||||||||    
T  41668661 ttagctcagttggtatgaacaatgcataatatatgcaa 41668698  T

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Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 601 - 655
Target Start/End: Original strand, 9691 - 9745
Alignment:
Q  601 gtcagatagcctagtggctagattcacacacattatgtatggagaagtggggaat 655  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  9691 gtcagatagctaagtggctagattcacacacattatgtgtggagaagtggggaat 9745  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 499
Target Start/End: Complemental strand, 31215 - 31171
Alignment:
Q  455 cgagtttagctcagttggtagaaacaatgcataatatatgcaaga 499  Q
    ||||||||||||||||||||   ||||||||||||||||||||||    
T  31215 cgagtttagctcagttggtatggacaatgcataatatatgcaaga 31171  T

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Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 14245 - 14203
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaag 498  Q
    ||||||| |||||||||||  ||||||||||||||||||||||    
T  14245 gagtttaactcagttggtatgaacaatgcataatatatgcaag 14203  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 515
Target Start/End: Original strand, 15944 - 16002
Alignment:
Q  457 agtttagctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcc 515  Q
    ||||||| ||| |||||| ||||||||||||||||||  |||| |||| ||||||||||    
T  15944 agtttagatcaattggtaaaaacaatgcataatatatataagatccgaggttcaaatcc 16002  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 668
Target Start/End: Original strand, 58638 - 58700
Alignment:
Q  606 atagcctagtggctagattcacacacattatgtatggagaagtggggaatttggggttcgaac 668  Q
    |||| |||||||||||| ||||||| || |||| |||||||||||| |||  |||||||||||    
T  58638 atagtctagtggctagaatcacacatataatgtgtggagaagtgggaaatccggggttcgaac 58700  T

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Target: scaffold1320 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 492
Target Start/End: Complemental strand, 1815 - 1782
Alignment:
Q  459 tttagctcagttggtagaaacaatgcataatata 492  Q
    ||||||||||||||||| ||||||||||||||||    
T  1815 tttagctcagttggtaggaacaatgcataatata 1782  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 464 - 525
Target Start/End: Complemental strand, 19106 - 19045
Alignment:
Q  464 ctcagttggtagaaacaatgcataatatatgcaagacccgatgttcaaatcccgaccaccat 525  Q
    ||||||||||| |||||||  |||| |||||||||| ||||  |||||||| ||||||||||    
T  19106 ctcagttggtataaacaatatataaaatatgcaagatccgagtttcaaatctcgaccaccat 19045  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 239809 - 239850
Alignment:
Q  456 gagtttagctcagttggtagaaacaatgcataatatatgcaa 497  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  239809 gagtttagctcagttggtaaggacaatgcataatatatgcaa 239850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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