View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2640R-Insertion-1 (Length: 955)

Name: NF2640R-Insertion-1
Description: NF2640R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2640R-Insertion-1
NF2640R-Insertion-1
[»] chr8 (42 HSPs)
chr8 (394-895)||(11611272-11611771)
chr8 (7-191)||(11610918-11611102)
chr8 (193-336)||(11611132-11611275)
chr8 (193-374)||(35739870-35740055)
chr8 (596-737)||(7642604-7642744)
chr8 (73-189)||(39434922-39435038)
chr8 (197-384)||(25021701-25021893)
chr8 (590-780)||(13018450-13018639)
chr8 (596-770)||(12763236-12763405)
chr8 (625-744)||(38573289-38573407)
chr8 (206-384)||(39434695-39434877)
chr8 (73-189)||(24125283-24125399)
chr8 (73-191)||(42921863-42921981)
chr8 (206-360)||(500279-500437)
chr8 (299-384)||(38815322-38815407)
chr8 (73-189)||(500482-500598)
chr8 (207-364)||(24125076-24125237)
chr8 (261-384)||(10189571-10189694)
chr8 (590-740)||(12978247-12978396)
chr8 (597-702)||(44395688-44395792)
chr8 (586-673)||(33015550-33015636)
chr8 (286-384)||(3187997-3188095)
chr8 (73-191)||(10189796-10189914)
chr8 (287-374)||(6592613-6592700)
chr8 (284-387)||(8619839-8619942)
chr8 (287-374)||(6618322-6618409)
chr8 (304-361)||(8882378-8882435)
chr8 (590-655)||(36642666-36642731)
chr8 (262-387)||(42922084-42922209)
chr8 (313-384)||(28196220-28196291)
chr8 (275-361)||(4699920-4700005)
chr8 (73-163)||(37517370-37517460)
chr8 (386-448)||(38815209-38815271)
chr8 (685-780)||(24999449-24999544)
chr8 (401-448)||(42659142-42659189)
chr8 (344-383)||(43824018-43824057)
chr8 (387-445)||(6592494-6592552)
chr8 (391-437)||(24320263-24320309)
chr8 (595-657)||(45079293-45079355)
chr8 (300-345)||(26364320-26364365)
chr8 (78-151)||(36005778-36005851)
chr8 (304-345)||(37517161-37517202)
[»] chr7 (51 HSPs)
chr7 (583-744)||(48488378-48488538)
chr7 (599-743)||(40198933-40199077)
chr7 (623-770)||(28514610-28514756)
chr7 (206-384)||(28517184-28517366)
chr7 (597-770)||(31191345-31191516)
chr7 (206-374)||(4501296-4501468)
chr7 (597-775)||(45618421-45618597)
chr7 (587-744)||(23247692-23247847)
chr7 (595-775)||(10624913-10625092)
chr7 (73-189)||(28517023-28517139)
chr7 (597-747)||(19086300-19086447)
chr7 (206-374)||(32584639-32584811)
chr7 (195-374)||(45613727-45613911)
chr7 (587-725)||(37869682-37869819)
chr7 (73-189)||(47679380-47679495)
chr7 (285-384)||(19277321-19277420)
chr7 (263-374)||(21326796-21326907)
chr7 (87-189)||(45613592-45613694)
chr7 (263-364)||(25186894-25186995)
chr7 (304-384)||(22198014-22198094)
chr7 (304-384)||(22239727-22239807)
chr7 (208-364)||(982997-983157)
chr7 (284-374)||(24527627-24527717)
chr7 (263-384)||(27521499-27521620)
chr7 (312-384)||(30216065-30216137)
chr7 (206-384)||(5825301-5825481)
chr7 (73-191)||(32585400-32585518)
chr7 (208-387)||(43856899-43857082)
chr7 (73-189)||(983204-983320)
chr7 (599-747)||(25119917-25120064)
chr7 (99-186)||(3676898-3676985)
chr7 (84-189)||(43857129-43857230)
chr7 (79-189)||(19277548-19277658)
chr7 (263-340)||(1249658-1249735)
chr7 (625-754)||(28646616-28646744)
chr7 (304-381)||(40726479-40726556)
chr7 (599-770)||(45662210-45662378)
chr7 (284-376)||(3676675-3676767)
chr7 (311-361)||(42295190-42295240)
chr7 (312-361)||(9281138-9281187)
chr7 (312-361)||(9292109-9292158)
chr7 (284-377)||(10905153-10905245)
chr7 (312-384)||(2904393-2904465)
chr7 (73-189)||(4501513-4501629)
chr7 (73-189)||(24527845-24527961)
chr7 (388-448)||(45974731-45974791)
chr7 (597-700)||(5081735-5081837)
chr7 (305-384)||(34067862-34067940)
chr7 (386-448)||(48539096-48539158)
chr7 (311-364)||(34772829-34772882)
chr7 (384-437)||(43856800-43856853)
[»] chr2 (46 HSPs)
chr2 (596-770)||(223863-224036)
chr2 (594-725)||(9047570-9047700)
chr2 (595-744)||(36903960-36904108)
chr2 (197-384)||(4412953-4413145)
chr2 (73-187)||(9685151-9685265)
chr2 (197-374)||(19161670-19161852)
chr2 (206-384)||(28225028-28225210)
chr2 (73-189)||(20142476-20142592)
chr2 (84-189)||(4412813-4412918)
chr2 (73-189)||(41867644-41867760)
chr2 (284-387)||(2888541-2888644)
chr2 (599-776)||(38402503-38402679)
chr2 (73-189)||(17344893-17345009)
chr2 (590-770)||(39791504-39791683)
chr2 (197-376)||(9685302-9685486)
chr2 (297-364)||(34814811-34814878)
chr2 (625-769)||(6563052-6563193)
chr2 (73-191)||(44686671-44686789)
chr2 (73-186)||(28225258-28225371)
chr2 (287-384)||(41867890-41867987)
chr2 (599-770)||(19955050-19955220)
chr2 (207-342)||(44686490-44686628)
chr2 (599-668)||(3002345-3002414)
chr2 (208-374)||(5532457-5532627)
chr2 (284-361)||(23484917-23484994)
chr2 (197-364)||(18744841-18745013)
chr2 (628-751)||(41283329-41283450)
chr2 (84-182)||(27502623-27502721)
chr2 (313-387)||(33612555-33612629)
chr2 (383-448)||(17344553-17344618)
chr2 (197-374)||(17344676-17344858)
chr2 (287-364)||(29808123-29808199)
chr2 (73-189)||(5532674-5532797)
chr2 (73-124)||(33612277-33612328)
chr2 (131-189)||(19161577-19161635)
chr2 (84-189)||(3825982-3826087)
chr2 (73-186)||(18744690-18744803)
chr2 (384-448)||(5532336-5532399)
chr2 (312-387)||(13147104-13147182)
chr2 (130-189)||(13146927-13146986)
chr2 (286-356)||(1296031-1296101)
chr2 (598-655)||(1758433-1758490)
chr2 (625-743)||(4428778-4428895)
chr2 (285-343)||(16351821-16351879)
chr2 (311-361)||(44720374-44720424)
chr2 (206-259)||(7760743-7760796)
[»] chr4 (64 HSPs)
chr4 (597-744)||(37624825-37624971)
chr4 (596-744)||(35808688-35808835)
chr4 (590-778)||(9093547-9093734)
chr4 (206-384)||(53619614-53619796)
chr4 (73-189)||(3330205-3330321)
chr4 (206-384)||(31847115-31847297)
chr4 (618-744)||(3121056-3121180)
chr4 (597-740)||(16958335-16958477)
chr4 (594-744)||(41621910-41622059)
chr4 (206-380)||(50000822-50001001)
chr4 (597-770)||(52270436-52270608)
chr4 (84-189)||(50000672-50000777)
chr4 (259-384)||(55933416-55933541)
chr4 (597-769)||(31861526-31861695)
chr4 (284-387)||(600671-600774)
chr4 (73-151)||(34952464-34952542)
chr4 (206-384)||(56462004-56462185)
chr4 (73-189)||(12918109-12918224)
chr4 (596-744)||(25231478-25231625)
chr4 (284-359)||(30940718-30940793)
chr4 (598-733)||(43594987-43595121)
chr4 (206-384)||(12918269-12918451)
chr4 (73-189)||(16957791-16957907)
chr4 (597-744)||(26876052-26876198)
chr4 (106-189)||(30940508-30940591)
chr4 (288-361)||(23255755-23255828)
chr4 (618-745)||(41735423-41735549)
chr4 (597-743)||(8680477-8680621)
chr4 (73-163)||(48506776-48506866)
chr4 (73-189)||(25706764-25706879)
chr4 (206-364)||(26521536-26521698)
chr4 (197-343)||(53170576-53170727)
chr4 (89-189)||(26521743-26521843)
chr4 (105-191)||(31847340-31847423)
chr4 (73-187)||(25504550-25504665)
chr4 (597-763)||(46737411-46737577)
chr4 (284-361)||(132436-132513)
chr4 (300-361)||(34536927-34536988)
chr4 (287-376)||(50462928-50463017)
chr4 (73-189)||(132642-132756)
chr4 (312-384)||(25504323-25504395)
chr4 (74-189)||(53170756-53170868)
chr4 (594-769)||(24504648-24504822)
chr4 (308-374)||(16957580-16957646)
chr4 (629-745)||(43142051-43142163)
chr4 (639-744)||(2168451-2168555)
chr4 (331-384)||(3330024-3330077)
chr4 (387-448)||(8738120-8738181)
chr4 (263-380)||(45386019-45386136)
chr4 (261-374)||(48656866-48656979)
chr4 (388-448)||(9601124-9601184)
chr4 (285-374)||(34107674-34107765)
chr4 (320-364)||(50483211-50483255)
chr4 (86-150)||(56461862-56461926)
chr4 (329-388)||(24719958-24720017)
chr4 (286-364)||(12053461-12053539)
chr4 (75-177)||(28882891-28882993)
chr4 (597-655)||(43432431-43432488)
chr4 (313-374)||(6865828-6865889)
chr4 (383-448)||(39001312-39001377)
chr4 (311-384)||(43849354-43849427)
chr4 (384-437)||(45661617-45661670)
chr4 (312-385)||(45760841-45760914)
chr4 (295-360)||(52022166-52022231)
[»] chr6 (32 HSPs)
chr6 (206-384)||(17249202-17249384)
chr6 (75-189)||(357455-357569)
chr6 (206-384)||(34304524-34304706)
chr6 (84-189)||(12401586-12401691)
chr6 (73-189)||(45405-45521)
chr6 (73-189)||(4206332-4206448)
chr6 (206-384)||(4206493-4206675)
chr6 (206-384)||(33220608-33220790)
chr6 (599-776)||(33134163-33134340)
chr6 (197-361)||(959631-959800)
chr6 (73-189)||(32115944-32116060)
chr6 (73-189)||(34304751-34304868)
chr6 (603-783)||(6100643-6100822)
chr6 (197-384)||(29337970-29338158)
chr6 (286-384)||(34554258-34554356)
chr6 (304-384)||(4165921-4166001)
chr6 (599-743)||(32147844-32147987)
chr6 (197-359)||(12401384-12401551)
chr6 (85-363)||(24016386-24016652)
chr6 (197-387)||(34415461-34415656)
chr6 (208-354)||(357616-357766)
chr6 (260-369)||(34168911-34169020)
chr6 (78-174)||(7200314-7200410)
chr6 (304-374)||(45676-45746)
chr6 (263-381)||(3714948-3715066)
chr6 (206-341)||(28543446-28543585)
chr6 (386-448)||(29338209-29338271)
chr6 (386-448)||(3137377-3137439)
chr6 (383-437)||(32115644-32115698)
chr6 (73-118)||(14538675-14538720)
chr6 (73-189)||(20693336-20693453)
chr6 (384-437)||(28009115-28009168)
[»] chr5 (43 HSPs)
chr5 (260-384)||(37873593-37873717)
chr5 (206-384)||(27336721-27336903)
chr5 (206-383)||(35310477-35310658)
chr5 (73-189)||(35310703-35310819)
chr5 (599-744)||(34338903-34339047)
chr5 (73-189)||(3113901-3114016)
chr5 (206-384)||(13166807-13166989)
chr5 (73-186)||(38446424-38446537)
chr5 (73-189)||(26212319-26212434)
chr5 (260-383)||(3114118-3114241)
chr5 (197-384)||(35455984-35456176)
chr5 (594-744)||(15476885-15477034)
chr5 (84-189)||(13166657-13166762)
chr5 (284-384)||(25663011-25663111)
chr5 (210-387)||(43115359-43115539)
chr5 (595-702)||(10284952-10285058)
chr5 (206-333)||(433371-433502)
chr5 (304-374)||(14423716-14423786)
chr5 (263-361)||(15291984-15292082)
chr5 (206-381)||(33691952-33692131)
chr5 (73-189)||(27336948-27337064)
chr5 (298-384)||(38875666-38875752)
chr5 (285-387)||(43129559-43129661)
chr5 (286-361)||(26212564-26212639)
chr5 (197-364)||(32269684-32269856)
chr5 (73-189)||(433547-433663)
chr5 (262-374)||(34335375-34335487)
chr5 (312-384)||(42921725-42921797)
chr5 (312-359)||(8858969-8859016)
chr5 (287-358)||(32230489-32230560)
chr5 (597-763)||(32292188-32292356)
chr5 (666-744)||(14662978-14663056)
chr5 (73-189)||(15291759-15291878)
chr5 (598-652)||(1088186-1088239)
chr5 (328-381)||(430633-430686)
chr5 (73-122)||(9841084-9841133)
chr5 (73-189)||(32269535-32269649)
chr5 (597-655)||(20920978-20921035)
chr5 (386-448)||(23023510-23023572)
chr5 (386-436)||(32269927-32269977)
chr5 (208-291)||(38446287-38446374)
chr5 (383-448)||(22188782-22188847)
chr5 (610-655)||(26362234-26362279)
[»] scaffold0186 (2 HSPs)
scaffold0186 (74-189)||(19976-20091)
scaffold0186 (284-384)||(10388-10492)
[»] chr1 (43 HSPs)
chr1 (206-384)||(34644594-34644776)
chr1 (581-744)||(36563851-36564010)
chr1 (73-189)||(28040863-28040979)
chr1 (206-384)||(25375730-25375912)
chr1 (206-384)||(29169691-29169872)
chr1 (73-189)||(34644821-34644937)
chr1 (594-744)||(42410166-42410315)
chr1 (197-374)||(45659534-45659717)
chr1 (73-189)||(19035702-19035818)
chr1 (297-373)||(21473042-21473118)
chr1 (297-384)||(28041119-28041206)
chr1 (599-744)||(894777-894921)
chr1 (284-373)||(19035486-19035575)
chr1 (625-757)||(13984245-13984376)
chr1 (285-384)||(22346923-22347022)
chr1 (208-360)||(50161316-50161472)
chr1 (594-710)||(10040435-10040548)
chr1 (88-189)||(22347132-22347233)
chr1 (206-352)||(37932115-37932264)
chr1 (73-189)||(29169530-29169646)
chr1 (285-384)||(2764507-2764606)
chr1 (263-374)||(31737281-31737392)
chr1 (85-189)||(38731835-38731942)
chr1 (598-742)||(38067686-38067829)
chr1 (317-360)||(20259809-20259852)
chr1 (597-723)||(37296989-37297114)
chr1 (594-763)||(3831352-3831519)
chr1 (287-387)||(4861971-4862071)
chr1 (260-384)||(16500062-16500186)
chr1 (317-381)||(38731640-38731704)
chr1 (284-376)||(42919896-42919987)
chr1 (599-655)||(51049906-51049962)
chr1 (592-655)||(13208089-13208152)
chr1 (73-191)||(7794652-7794770)
chr1 (263-377)||(36486921-36487035)
chr1 (88-186)||(37931969-37932067)
chr1 (630-744)||(14104303-14104416)
chr1 (287-383)||(37200012-37200107)
chr1 (197-256)||(20259685-20259744)
chr1 (385-448)||(30688472-30688535)
chr1 (304-362)||(15584924-15584982)
chr1 (590-655)||(3527653-3527718)
chr1 (618-655)||(36384854-36384891)
[»] chr3 (48 HSPs)
chr3 (598-744)||(8108210-8108354)
chr3 (597-775)||(45249333-45249510)
chr3 (260-384)||(26772786-26772910)
chr3 (586-753)||(53466191-53466357)
chr3 (197-361)||(13582560-13582729)
chr3 (73-189)||(29862052-29862168)
chr3 (73-189)||(52741247-52741363)
chr3 (288-384)||(52741495-52741591)
chr3 (197-384)||(53785737-53785929)
chr3 (595-743)||(23919141-23919288)
chr3 (197-361)||(39583116-39583285)
chr3 (84-191)||(52411649-52411756)
chr3 (206-384)||(7900886-7901068)
chr3 (286-387)||(44198792-44198893)
chr3 (73-190)||(49018217-49018334)
chr3 (197-360)||(37992384-37992552)
chr3 (263-360)||(49018015-49018112)
chr3 (313-361)||(37133007-37133055)
chr3 (312-380)||(38670887-38670955)
chr3 (73-151)||(35236421-35236499)
chr3 (306-374)||(32546833-32546901)
chr3 (73-189)||(44199022-44199138)
chr3 (596-751)||(39611620-39611772)
chr3 (296-384)||(7502002-7502091)
chr3 (73-189)||(7901107-7901221)
chr3 (263-384)||(38978757-38978878)
chr3 (694-770)||(31580363-31580439)
chr3 (595-675)||(33865307-33865386)
chr3 (78-122)||(45676527-45676571)
chr3 (73-181)||(53785972-53786080)
chr3 (618-765)||(6488766-6488912)
chr3 (130-189)||(39583022-39583081)
chr3 (385-424)||(46940902-46940941)
chr3 (597-744)||(48993361-48993506)
chr3 (386-448)||(39583359-39583421)
chr3 (78-188)||(43123400-43123510)
chr3 (286-376)||(46940751-46940841)
chr3 (317-387)||(52411903-52411973)
chr3 (287-384)||(4473089-4473186)
chr3 (383-448)||(26772673-26772738)
chr3 (285-360)||(3443292-3443367)
chr3 (383-453)||(4669790-4669860)
chr3 (206-252)||(7501908-7501954)
chr3 (326-384)||(38146084-38146142)
chr3 (99-189)||(46940540-46940630)
chr3 (387-448)||(37992248-37992309)
chr3 (383-448)||(38145971-38146036)
chr3 (100-189)||(38146315-38146404)
[»] scaffold0490 (1 HSPs)
scaffold0490 (207-374)||(6372-6542)
[»] scaffold0148 (1 HSPs)
scaffold0148 (304-387)||(33275-33358)
[»] scaffold0031 (1 HSPs)
scaffold0031 (284-387)||(49436-49539)
[»] scaffold0002 (1 HSPs)
scaffold0002 (595-770)||(433847-434019)
[»] scaffold0470 (1 HSPs)
scaffold0470 (287-374)||(7640-7727)
[»] scaffold0110 (1 HSPs)
scaffold0110 (285-364)||(47519-47598)
[»] scaffold0493 (1 HSPs)
scaffold0493 (314-384)||(8525-8595)
[»] scaffold0009 (2 HSPs)
scaffold0009 (311-384)||(103134-103206)
scaffold0009 (383-448)||(103021-103086)
[»] scaffold0224 (1 HSPs)
scaffold0224 (284-376)||(18344-18435)
[»] scaffold0119 (1 HSPs)
scaffold0119 (286-355)||(16191-16260)
[»] scaffold0020 (1 HSPs)
scaffold0020 (595-655)||(171560-171620)
[»] scaffold0085 (1 HSPs)
scaffold0085 (298-351)||(37391-37444)


Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 394 - 895
Target Start/End: Original strand, 11611272 - 11611771
Alignment:
Q  394 tgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaagggttcaatggtacaacttattgctgggttaccttacattcctta 493  Q
    |||||| ||||| ||||||| |||||||||||  ||||||||||||||||||||||| | ||| |||||||||||||||| |||||||||| |||| |      
T  11611272 tgactcataggtccatgaatattgtgtttaccaagattgattttttcatccaaaaggatccaacggtacaacttattgctcggttaccttatattcat-- 11611369  T
Q  494 cgtatgtaattaatctttgatatatattagcaaatagattcaatgatagctaatgatgtgaattctgtccattattatataaaaatgataacaataaaaa 593  Q
       ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    ||| |||||||||||||||||||||||  ||||||||    
T  11611370 ---atgtaattaatctttgatatatattagtaaatagaatcaatgatagctaatgatgt----tctatccattattatataaaaatgatagtaataaaaa 11611462  T
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    ||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11611463 taaggaaaatgttaacaagtgttttaagagcaatgtttaagcatataaaagtagcaactttttgcattgagaattatacggtaataacttcaacaagtgt 11611562  T
Q  694 ttgactta-ttttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaaaataatttatctcgga 792  Q
    || ||||| |||||||||||||||||||||||| ||||||||||||||||||  | ||| ||||| |||||| |||||  |||||||||||||||||  |    
T  11611563 ttaacttatttttttcaaagcataatatctttttatgggttccttaaacaatgtccttaggacacttgttaacaagaccttaaaaataatttatctcaaa 11611662  T
Q  793 acacagatttatatnnnnnnnnctttac-aaccaaaatcaaacttttcattatt---gagagtg-ttgcatggtatccaaaaaaatcttagttc-aactt 886  Q
    ||| | ||||||||        |||||| |||||||||||||||||||||||||   ||||||| |||||||||||||||||||||| |||||| |||||    
T  11611663 acataaatttatataaaaaaaactttacaaaccaaaatcaaacttttcattattgaggagagtgtttgcatggtatccaaaaaaatcctagttcaaactt 11611762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 11610918 - 11611102
Alignment:
Q  7 cactaataatcaaaatatggcttctccaatgcacaacataaatagattaaatgnnnnnnntgattgttaagtacattcatgactttgttacggatgtcct 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||    
T  11610918 cactaataatcaaaatatggcttctccaatgcacaacataaatagattaaatgaaaaaaatgatttttaagtacattcatgactttgttacggatgtcct 11611017  T
Q  107 ttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagattg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||    
T  11611018 ttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctcaatgaatttgctgactgacccactagatagaagattg 11611102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 193 - 336
Target Start/End: Original strand, 11611132 - 11611275
Alignment:
Q  193 atgaatgggtaggggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgagggcttttacggtaagatatacatccctaaaag 292  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  11611132 atgaatgggtaggggaaaacatgcatgtgtggacttcacaggggtttcaccactcgtgggattatgagggcttttacgataagatagacatccctaaaag 11611231  T
Q  293 ttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgac 336  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  11611232 ttgtgtcaaataaagtggccaaatatgagaaagcatgttctgac 11611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 193 - 374
Target Start/End: Original strand, 35739870 - 35740055
Alignment:
Q  193 atgaatgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga---gggcttttacggtaagatatacatcccta 288  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||| |||||| ||||||||| |    || ||||||||||| || | |||||||||    
T  35739870 atgaatgggtaggaggaaaacatgcatgtgtggacttgactggggtttcaccactagtgggattaaggtcgggccttttacggtaggacagacatcccta 35739969  T
Q  289 aaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||||||| ||  |||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||| || ||||||    
T  35739970 aaagttgtgttaagcaaagtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatacaattagcttttgacacttt 35740055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 596 - 737
Target Start/End: Complemental strand, 7642744 - 7642604
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    ||||||||||||| || ||| |||||| |||||||||| ||| ||||| ||||||||||| ||||||  ||||||||||| |||||| ||||||||||||    
T  7642744 aggaaaatgttaacaaatgttctaagaacattgtttaaacatctaaaattagcaactttt-gcattgtaaattgtacggttataacttcaacaagtgttt 7642646  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttcctt 737  Q
    ||||||| |||||||| |||||| |||||| || ||||||||    
T  7642645 gacttatattttcaaaacataatttctttttataggttcctt 7642604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 39435038 - 39434922
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||| | | |||||| |||||||||||||||  ||||||||||  |||||||    
T  39435038 ttaagtacaggcatgactttgttagggatgtactttttgatatattcaggcgagcgggagtatcagtgaagaaggaggcgcctgtgaactttctgactga 39434939  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  39434938 cccactagatagaagat 39434922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 197 - 384
Target Start/End: Original strand, 25021701 - 25021893
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgagg----gcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||||||||||||| | |||| |||||| ||||||||| | |     | |||||| ||| || ||||| ||||||||    
T  25021701 atgggtaggaggaaaacatgcatgtgtggacttgaccggagtttcaccacttgtgggattaggggtcgatgtttttacagtatgacatacagccctaaaa 25021800  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||  ||||||   ||| ||||||||| ||||||| ||||||||| |||||||||||||||| ||| || || |||||||||||||    
T  25021801 gttgtgtcaagcaaagtggtgaaatatgagaaagtgtgttctcacaatcaacatgtttttataccattttcttttgacatttttggcttccta 25021893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 590 - 780
Target Start/End: Complemental strand, 13018639 - 13018450
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaa 689  Q
    |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||   || |||  |||||    
T  13018639 aaaatatggaaaatgttaacaagtgccctaagggcattgtttaagcatataaaagtagcaac-ttttgcattggaaattgtacgaatatgactttaacaa 13018541  T
Q  690 gtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaaaata 780  Q
     |||||||||||| |||||||   ||| | |  ||| |||||||||||||||||| || ||| ||||| |||||| ||||| || ||||||    
T  13018540 atgtttgacttatattttcaagatatatttttcttttatgggttccttaaacaatgcccttaggacacttgttaacaagacccttaaaata 13018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 596 - 770
Target Start/End: Original strand, 12763236 - 12763405
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    ||||||||||||| || || |||||| ||||||||||||||| ||||| |||||| ||||||||||     |||||| || |||||| |||||| | |||    
T  12763236 aggaaaatgttaacaaatgccctaagggcattgtttaagcatttaaaattagcaa-tttttgcattt----ttgtactgttataacttcaacaaatattt 12763330  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    ||||||| ||||||||||||| | |||||| |||||||||||||||||| |||||| ||||  |||||| |||||    
T  12763331 gacttatattttcaaagcatactttctttttatgggttccttaaacaatgcctttaggacatttgttaacaagac 12763405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 625 - 744
Target Start/End: Complemental strand, 38573407 - 38573289
Alignment:
Q  625 attgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttt 724  Q
    |||||||||| || ||||||||| ||||||| ||||||  ||||||||||| |||||| |||||| |||||||||||| ||||||| ||||||| |||||    
T  38573407 attgtttaagtatctaaaagtagtaactttt-gcattggaaattgtacggttataacttcaacaaatgtttgacttatattttcaaggcataatttcttt 38573309  T
Q  725 tcatgggttccttaaacaat 744  Q
    | ||||||||||||||||||    
T  38573308 ttatgggttccttaaacaat 38573289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 39434877 - 39434695
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||| |||||||  |||||| |||||| ||||| ||| | |    ||||||||| ||| || |   | | |||||||||| |||||    
T  39434877 ggaaaacatgcatgtgtgtacttgactggggtttcaccacttgtgggtttaggggtggaggcttttacagtaggacaggaagctctaaaagttgcgtcaa 39434778  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| || || |||||||| |||||||    
T  39434777 gcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttccta 39434695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 24125399 - 24125283
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||| || ||||   ||| |||||||||| ||||||| ||||| |||||  |||||||    
T  24125399 ttaagtacaaacatgactttgttagggatgtactttttgatatatttagacgggcaggagcattagtgaagtaggaggcgtctgtcaacttcctgactga 24125300  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  24125299 cccactagatagaagat 24125283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 42921863 - 42921981
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| |||||||| |||| |||||| |||||||||||||||||||||| |  |||||  |||||||||||| || || ||||||| |||||| |    
T  42921863 ttaagtacatacatgacttcgttagggatgttctttttgatatattcaggcgggaggaagtatcggtgaagaaggagacccctatgaacttcttgactta 42921962  T
Q  173 cccactagatagaagattg 191  Q
    | ||||| |||||||||||    
T  42921963 ctcactatatagaagattg 42921981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 206 - 360
Target Start/End: Complemental strand, 500437 - 500279
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||| |||||||    ||||| |||||| ||||||||| | |    | ||||||||||| ||   ||| |||||||||||| |||||    
T  500437 ggaaaacatgcatgtgtagacttgagtgaggtttcaccacttgtgggattaggtgtcgggccttttacggtaggaccgacagccctaaaagttgcgtcaa 500338  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
      |||||| |||||||||||||| |||||||||||||||||| || |||||||||||||    
T  500337 gcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccattt 500279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 299 - 384
Target Start/End: Complemental strand, 38815407 - 38815322
Alignment:
Q  299 caaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||  ||||||||    
T  38815407 caaacaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttccgcttccta 38815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 500598 - 500482
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||| ||||||| |||||| ||||||||||||||||| |  | |||||||| |||||||||||| || | |||||||||  ||| | |    
T  500598 ttaagtacatgcatgattttgttagggatgtactttttgatatattcagacatgcgagagtatcagtgaagaaggaagcgtatgtgaacttcctgattta 500499  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  500498 cccactagatagaagat 500482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 207 - 364
Target Start/End: Complemental strand, 24125237 - 24125076
Alignment:
Q  207 gaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaaa 302  Q
    |||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |    | ||||||||||  || |  || ||||||||| ||  ||||     
T  24125237 gaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattatgcgtcgtgccttttacggtgggacaagcagccctaaaagctgcatcaag 24125138  T
Q  303 taaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
     ||| || ||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  24125137 caaaatggccaaacatgagaaagcgtgctctgacaatcaacatgcttttataccatttgctt 24125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 261 - 384
Target Start/End: Complemental strand, 10189694 - 10189571
Alignment:
Q  261 ggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    |||||||| |||| || |||||| ||||||||||| | ||| ||||||   |||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  10189694 ggcttttatggtaggacatacattcctaaaagttgcgccaattaaagtagtcaaacaagagaaagcatgttctgacaatcaacatgtttttatatcattt 10189595  T
Q  361 gcttctggcacttttggcttccta 384  Q
    || | || || |||||||||||||    
T  10189594 gcatttgacatttttggcttccta 10189571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 590 - 740
Target Start/End: Complemental strand, 12978396 - 12978247
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaa 689  Q
    |||| ||| |||||||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||| |||  |||||||||||  | |||  |||||    
T  12978396 aaaacaagaaaaatgttaacaagtgccctaagggcattgtttaagaatataaaagtagcaa-tttttgccttggaaattgtacggtcgtgactttaacaa 12978298  T
Q  690 gtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaa 740  Q
    |||||||| || | |||||||  |||||| |||||| ||| ||| ||||||    
T  12978297 gtgtttgatttgtattttcaagacataatttctttttatgagtttcttaaa 12978247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 597 - 702
Target Start/End: Complemental strand, 44395792 - 44395688
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||||| | || ||||||||||| ||| ||||||||||||| |||| |||||  ||||||||| | |||||| |||||||||||||    
T  44395792 ggaaaatgttaacaagtgtcatgagggcattgtttaaacatttaaaagtagcaac-ttttacattggaaattgtacgtttataacttcaacaagtgtttg 44395694  T
Q  697 acttat 702  Q
    ||||||    
T  44395693 acttat 44395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 586 - 673
Target Start/End: Original strand, 33015550 - 33015636
Alignment:
Q  586 aataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacg 673  Q
    |||||||| |||||||||||||| ||||| | |||| ||||||||||||||| ||||||||||||| ||||||||||| | |||||||    
T  33015550 aataaaaagaaggaaaatgttaacaagtgccttaagggcattgtttaagcatctaaaagtagcaac-ttttgcattgaaagttgtacg 33015636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 286 - 384
Target Start/End: Complemental strand, 3188095 - 3187997
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||  ||||  |||||| | ||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||  ||||| |||||||||    
T  3188095 ctaaaagttgcatcaagcaaagtggcaaaacatgaggaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttccta 3187997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 10189914 - 10189796
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| | ||||| |||||||||||| || |||||||||||||| |||||||||||| |    ||||| |||  | |||||    
T  10189914 ttaagtacaaacatgactttgttaagaatgtcatttttgatatatccaagcgggtgagagtatcagtgaagaaggatgggcatgtgatctttctaactga 10189815  T
Q  173 cccactagatagaagattg 191  Q
    | |||||||||||||||||    
T  10189814 ctcactagatagaagattg 10189796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 6592700 - 6592613
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||| || |||||  |||||| ||||||||||||||||||||||| ||||||||| || ||||| ||||||||||| || ||||||    
T  6592700 taaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacacttt 6592613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 8619942 - 8619839
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    |||||||||||| ||||| |||| ||  ||||||||| ||||||| || |||||||||||||| |||||||||||||| || |  || ||||||||| ||    
T  8619942 ccctaaaagttgcgtcaagtaaaatggtcaaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacatttttggctttct 8619843  T
Q  384 aaca 387  Q
    ||||    
T  8619842 aaca 8619839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 6618409 - 6618322
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||||| |||||||| |||    ||||||||||||||||||||| ||||||||| || ||||| ||||||||||| || ||||||    
T  6618409 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacacttt 6618322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 8882435 - 8882378
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||| ||||||||||||||||||||||||||||||||  || ||||| ||||||||    
T  8882435 aaagtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttg 8882378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 590 - 655
Target Start/End: Original strand, 36642666 - 36642731
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||||| |||||||||| ||||||| |||  ||||||||||||||| |||||||| ||||||||    
T  36642666 aaaataagaaaaatgttaacaagtgtcataaaggcattgtttaagcatctaaaagtaacaactttt 36642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 262 - 387
Target Start/End: Original strand, 42922084 - 42922209
Alignment:
Q  262 gcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||| ||||||| || || || ||||||||| |||||| ||| ||  ||||  ||||||| |||||| ||||||||||  || ||||| | ||||||    
T  42922084 gcttttatggtaagacatgcagccataaaagttgcgtcaaacaaaatggtcaaatttgagaaaacgtgttttgacaatcaaaatgcttttaaatcatttg 42922183  T
Q  362 cttctggcacttttggcttcctaaca 387  Q
    | | || |||||||||||||||||||    
T  42922184 cctttgacacttttggcttcctaaca 42922209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 313 - 384
Target Start/End: Complemental strand, 28196291 - 28196220
Alignment:
Q  313 aaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| || || |||||||| |||||||    
T  28196291 aaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttgtcttccta 28196220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 4700005 - 4699920
Alignment:
Q  275 gatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||| ||| |||| |||||||||||||  |||||| |||||||||| || ||||||||| ||||| ||| |||||||| ||||||||    
T  4700005 gatagacaaccctcaaagttgtgtcaagcaaagtggccaaacatgataa-gcgtgttctcacaattaacatgtttttacaccatttg 4699920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 37517460 - 37517370
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaactt 163  Q
    |||||||||  ||||||||||||| |||||| ||||||||||||||||| | || |  | ||| || ||||||||||||  ||||||||||    
T  37517460 ttaagtacagacatgactttgttagggatgtactttttgatatattcagacaggcggaaatatcagcgaagaaggaggcgcctgtgaactt 37517370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 38815271 - 38815209
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| ||| ||||| ||||||||||||||||||  |||||| ||||| |||||||||    
T  38815271 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttttccatccaaaa 38815209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 780
Target Start/End: Original strand, 24999449 - 24999544
Alignment:
Q  685 aacaagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaaaata 780  Q
    |||||||||||||||| | |||||||  |||||| ||||||  |||||||||| |||||| || ||| | ||| |||||| ||||| | |||||||    
T  24999449 aacaagtgtttgacttgtattttcaagacataatttctttttgtgggttcctttaacaatgcccttagggcacttgttaacaagacccaaaaaata 24999544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 42659189 - 42659142
Alignment:
Q  401 taggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||||||||||||||||||  ||||| ||||| ||||||||||    
T  42659189 taggttcatgaatgttgtgtttacgaggattaattttgtcatccaaaa 42659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 383
Target Start/End: Complemental strand, 43824057 - 43824018
Alignment:
Q  344 gtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  43824057 gtgtttttataccatttgcttttgacacttttggcttcct 43824018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 6592552 - 6592494
Alignment:
Q  387 aatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatcca 445  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||| |||| |||||||    
T  6592552 aatgtcatgtctcataggttcatgaatgttgtgtttacgagtattggttttgtcatcca 6592494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 24320309 - 24320263
Alignment:
Q  391 tcatgactcgtaggttcatgaatgttgtgtttacccggattgatttt 437  Q
    ||||||||| | ||||||||||||||||||||||  |||||||||||    
T  24320309 tcatgactcattggttcatgaatgttgtgtttacgaggattgatttt 24320263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 595 - 657
Target Start/End: Original strand, 45079293 - 45079355
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttg 657  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||| |||| |||| || ||||||    
T  45079293 aaggaaaatgataacaagtgccctaagggcattgtttaagcatctaaatgtagaaagtttttg 45079355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 26364320 - 26364365
Alignment:
Q  300 aaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgt 345  Q
    ||||||||||||||||| |||||||||||  ||||| |||||||||    
T  26364320 aaataaagtgaccaaacttgagaaagcgtagtctgataatcaacgt 26364365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 36005851 - 36005778
Alignment:
Q  78 tacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggc 151  Q
    ||||| ||| ||||| ||| |||||||||||||||||  || |||||||||||||| |  || |||||||||||    
T  36005851 tacatacataacttttttagggatgtcctttttgatacttttaggcgggtgagagtgtctgttaagaaggaggc 36005778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 345
Target Start/End: Complemental strand, 37517202 - 37517161
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgt 345  Q
    |||||| ||||||||||||||| |||||| ||||||||||||    
T  37517202 aaagtggccaaacatgagaaagggtgttccgacaatcaacgt 37517161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 5e-43; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 744
Target Start/End: Original strand, 48488378 - 48488538
Alignment:
Q  583 aacaataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataact 682  Q
    |||||||| | ||||||||||| ||| ||||| | |||| | ||||||||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||    
T  48488378 aacaataatattaaggaaaatgctaacaagtggcttaagggtattgtttaagcatctaaaagtagcaactttt-gcattggaaattgtacggttataact 48488476  T
Q  683 ccaacaagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
     ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  48488477 tcaacaagtgtttgacttatattttcaaagcataatttctttttatgggttccttaaacaat 48488538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 599 - 743
Target Start/End: Original strand, 40198933 - 40199077
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| |||||| ||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||| ||| ||||||| ||||||||| | ||    
T  40198933 aaaatgttaacaagtgttctaagggcattgtttaagcatctaaaagtagcaattttttgcattgggaattgtatggttataactctaacaagtgtctaac 40199032  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaa 743  Q
    |||| ||||||| ||||||| |||||| |||| ||| ||||||||    
T  40199033 ttatattttcaaggcataatttctttttatggattctttaaacaa 40199077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 623 - 770
Target Start/End: Complemental strand, 28514756 - 28514610
Alignment:
Q  623 gcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatct 722  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||  |||||||||||||||||| ||||||| ||||||| |||    
T  28514756 gcattgtttaagcatctaaaagtagcaactttt-gcattggaaattgtacggttataacttgaacaagtgtttgacttatattttcaaggcataatttct 28514658  T
Q  723 tttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    ||| |||||||||||||||||| || ||| | ||| |||||| |||||    
T  28514657 ttttatgggttccttaaacaatgcccttagggcacttgttaacaagac 28514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 28517184 - 28517366
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||| |||||||||||||||  |||||| |||||| ||||| |||    || |||||||||| ||| || | ||| ||||||||| || |||||    
T  28517184 ggaaaacatgtatgtgtggacttgactggggtttcaccacttgtgggtttaggggtgggggcttttacagtaggacagacaaccctaaaagctgcgtcaa 28517283  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||| || |||||||| |||||||    
T  28517284 gcaaagtggccaaacatgagaaagcgtgtttagacaatcaacatgtttttataccatttgcttttgacacttttgacttccta 28517366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 597 - 770
Target Start/End: Complemental strand, 31191516 - 31191345
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||| |||| |||||  ||||| ||||| ||||||  ||||||||||||    
T  31191516 ggaaaatgttaacaagtgccctaagggcattgtttaagcatctaaaagtagcaac-ttttacattggaaattgcacggttataactttaacaagtgtttg 31191418  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    |||||| ||||||| ||||||| |||||| || ||||||||||||||| || ||| | ||| |||||| |||||    
T  31191417 acttatattttcaaggcataatttctttttat-ggttccttaaacaatgcccttagggcacttgttaacaagac 31191345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 206 - 374
Target Start/End: Complemental strand, 4501468 - 4501296
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||| ||||||||  |||||| |||||| ||||||||| | |    | ||||||| ||| || | ||| ||||||||| || |||||    
T  4501468 ggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggtgtcgggccttttaccgtaggacaaacaaccctaaaagctgcgtcaa 4501369  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    | |||||| ||||||||||||||||||||||||||||||||| || |||||||  |||||||| || ||||||    
T  4501368 acaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt 4501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 597 - 775
Target Start/End: Original strand, 45618421 - 45618597
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    ||||||| |||| |||||||||||| |||| ||||||||||||| |||||||||| ||||||||||| |||||||| ||  | |||  || || | ||||    
T  45618421 ggaaaatattaacaagtgtcctaagggcat-gtttaagcatatagaagtagcaac-ttttgcattgaaaattgtaccgttgtgactttaataaatatttg 45618518  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaa 775  Q
    |||||| |||||||  |||||| || ||| ||||||||||||||||||||| ||| | ||| |||||||||||| ||||    
T  45618519 acttatattttcaagacataatttccttttatgggttccttaaacaatacccttagggcacttgttaataagaccctaa 45618597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 587 - 744
Target Start/End: Original strand, 23247692 - 23247847
Alignment:
Q  587 ataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaa 686  Q
    ||||||||||| |||||||||| ||||| ||||||  |||||||||| |||  |||| ||||||||||| ||||||  ||||| ||||| |||||| |||    
T  23247692 ataaaaataagaaaaatgttaacaagtgccctaaggacattgtttaaacatcaaaaa-tagcaactttt-gcattggaaattgaacggttataacttcaa 23247789  T
Q  687 caagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||||||||||||||| ||||||| ||||||| |||||| |||| || || |||||||    
T  23247790 caagtgtttgacttatattttcaaggcataatttctttttatggattactaaaacaat 23247847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 595 - 775
Target Start/End: Complemental strand, 10625092 - 10624913
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtt 694  Q
    ||||||||| |||| |||||  ||||| ||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| || |||  || |||||||    
T  10625092 aaggaaaattttaacaagtgctctaagggcattgtttcagcatataaaagtagaaactttt-gcattgaaaattgtacggttatgactataataagtgtt 10624994  T
Q  695 tgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaa 775  Q
    |||||| | |||||||  |||||| ||||||  ||||||| ||||||||| || |||  |||| |||||| ||||| ||||    
T  10624993 tgacttgtattttcaagacataatttctttttgtgggttctttaaacaatgcccttagaacacttgttaacaagaccctaa 10624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 28517023 - 28517139
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||| | | ||| ||  ||||||||||||||  ||||||||||  |||||||    
T  28517023 ttaagtacaagcatgactttgttagggatgtactttttgatatattcaggcgagcgggagcatcggtgaagaaggaggcgcctgtgaactttctgactga 28517122  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  28517123 cccactagatagaagat 28517139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 597 - 747
Target Start/End: Complemental strand, 19086447 - 19086300
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| ||||||   |||||||||| || ||||| ||| || ||||||| |||  |||||||||||||||||| |||||||||||||    
T  19086447 ggaaaatgttaacaagtgccctaagg--attgtttaagaatctaaaaatagtaa-tttttgctttggaaattgtacggtaataacttcaacaagtgtttg 19086351  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacc 747  Q
    |||||| ||||||| ||||||| |||||| |||| ||  ||||||||||||    
T  19086350 acttatattttcaaggcataatttctttttatggattttttaaacaatacc 19086300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 206 - 374
Target Start/End: Complemental strand, 32584811 - 32584639
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||||||||||| ||||||| ||| || ||||||||| | |    || |||||||||| || || || |||||||| |||  ||||    
T  32584811 ggaaaacatgcatgtgtggacttgactcgggtttcacctcttgtgggattaggggtcggggattttacggtaggacatgcaaccctaaaaattgcatcaa 32584712  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    | ||||||  ||||||||||||| |||||||||||||||||  || ||||| ||||||||||| || ||||||    
T  32584711 acaaagtggtcaaacatgagaaaacgtgttctgacaatcaagatgcttttacaccatttgcttttgacacttt 32584639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 195 - 374
Target Start/End: Original strand, 45613727 - 45613911
Alignment:
Q  195 gaatgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaa 289  Q
    ||||||||||| ||||||||||||||||| ||||||||  |||||| |||||| || |||||| | |    | ||||| | ||| || | ||| ||||||    
T  45613727 gaatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtaggattaggtgtcgggcctttttccgtaggacagacaaccctaa 45613826  T
Q  290 aagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||| ||||| ||| ||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||| || || ||||||    
T  45613827 aagttgcgtcaagtaaggtgaccaaacacgggaaagtgtgttctgacaatcaacatgtttttataccatttgattttgacacttt 45613911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 587 - 725
Target Start/End: Original strand, 37869682 - 37869819
Alignment:
Q  587 ataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaa 686  Q
    ||||||| |||||||||||||| |||    |||| | ||||||||||| |||||||||||||||||||| ||||||| ||||||||||| || |||  ||    
T  37869682 ataaaaacaaggaaaatgttaacaagctctctaaaaacattgtttaagtatataaaagtagcaactttt-gcattgaaaattgtacggttatgactttaa 37869780  T
Q  687 caagtgtttgacttattttttcaaagcataatatctttt 725  Q
    |||||||||||||||| |||| ||| |||||| ||||||    
T  37869781 caagtgtttgacttatatttttaaaacataatttctttt 37869819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 47679495 - 47679380
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| || |||||||||| |||||| |||||||||||||||||||||| | | |||| ||||||||||||| |   |||||||||  |||||||    
T  47679495 ttaagtacat-cacgactttgttagggatgtactttttgatatattcaggcgggcgggggtatcagtgaagaaggagtcgcgtgtgaactttctgactga 47679397  T
Q  173 cccactagatagaagat 189  Q
    | |||||||||||||||    
T  47679396 cgcactagatagaagat 47679380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 19277420 - 19277321
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||| || |||||  |||||  ||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  19277420 cctaaaagctgcgtcaagcaaagtagccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttccta 19277321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 21326796 - 21326907
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||||| ||| || | ||| |||||||||  | |||||  |||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21326796 cttttaccgtaggacaaacagccctaaaagccgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgc 21326895  T
Q  363 ttctggcacttt 374  Q
    || || ||||||    
T  21326896 ttttgacacttt 21326907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 45613592 - 45613694
Alignment:
Q  87 gactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaa 186  Q
    |||||||||| |||||| ||||||||||||||||| ||||   |||||| ||||||||||||| | |||||||||||  |||||||||| ||||| ||||    
T  45613592 gactttgttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaaggagacgtctgtgaacttcctgactgacccgctagaaagaa 45613691  T
Q  187 gat 189  Q
    |||    
T  45613692 gat 45613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 263 - 364
Target Start/End: Original strand, 25186894 - 25186995
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||||| ||| || ||| | |||||||||||||||||| |||||||  | ||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  25186894 cttttaccgtaggacataaaaccctaaaagttgtgtcaagtaaagtggtctaacatgagaaagcgtgttccgataatcaacatgtttttctaccatttgc 25186993  T
Q  363 tt 364  Q
    ||    
T  25186994 tt 25186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 22198094 - 22198014
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||| || |||||| || ||||||    
T  22198094 aaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttccta 22198014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 22239727 - 22239807
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||| || |||||| || ||||||    
T  22239727 aaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttccta 22239807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 208 - 364
Target Start/End: Complemental strand, 983157 - 982997
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta--tgaggg--cttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    ||||||||| ||||| ||||||||  |||||| |||||| |||||||||  || |||  ||||||  ||| || |  || || |||||| || |||||      
T  983157 aaaacatgcttgtgtagacttgactagggtttaaccacttgtgggattaggtgtgggaccttttattgtaggacaggcagccataaaagctgcgtcaagc 983058  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||||    
T  983057 aaagtggccaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgctt 982997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 24527717 - 24527627
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||||||  ||||||| |||||||   |||||||||||| |||||||||||||||||| || ||||||||||||||||| || ||||||    
T  24527717 ccctaaaagcagtgtcaagtaaagtgggaaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 24527627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 263 - 384
Target Start/End: Complemental strand, 27521620 - 27521499
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||||||||| || || || || ||||||||| || ||| ||||||  ||||||||||||| |||||||||||||||||| ||  ||||||| |||| |    
T  27521620 cttttacggtaggacatgcacccttaaaagttgcgttaaacaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgcatttatacaatttac 27521521  T
Q  363 ttctggcacttttggcttccta 384  Q
    || || ||||||||| ||||||    
T  27521520 ttttgacacttttggtttccta 27521499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 312 - 384
Target Start/End: Original strand, 30216065 - 30216137
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||| || ||||||    
T  30216065 caaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttccta 30216137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 5825481 - 5825301
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| ||| | |    ||||||||||| | || |   | ||||||||| ||  ||||    
T  5825481 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcgaggcttttacggcaggacaggaagccctaaaagctgcatcaa 5825382  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||||||  ||||||||| || ||||||| ||||||||||| |||||||||||||||| ||| || |||||| ||| |||||    
T  5825381 gcaaagtg--caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacactttcggcatccta 5825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 32585518 - 32585400
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| || ||| | |||||||||||||||| |||   |||||| |||||||||||||||   |||||||||  ||| |||    
T  32585518 ttaagtacaggcatgactttgttaggggtgtgccttttgatatattcaggtgggcaggagtataagtgaagaaggaggcgcatgtgaactttctgaatga 32585419  T
Q  173 cccactagatagaagattg 191  Q
    || |||||||| |||||||    
T  32585418 cctactagataaaagattg 32585400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 208 - 387
Target Start/End: Complemental strand, 43857082 - 43856899
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    ||||||| |||| |||||||||||  |||||| |||||| ||||||||| | |    ||||||||| ||| || | ||| |  |||||| || |||||      
T  43857082 aaaacatacatgcgtggacttgacgggggtttcaccacttgtgggattaggggtcggggcttttacagtaggacagacaacattaaaagatgcgtcaatc 43856983  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    |||||| | | ||||||||||||||||| ||||||||||| ||  ||||||| |||||||| || || |||||| |||||||||    
T  43856982 aaagtggctagacatgagaaagcgtgttttgacaatcaacatgcgtttatacaatttgcttttgacatttttggtttcctaaca 43856899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 983320 - 983204
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  | ||||||||||| |||| | ||||| ||||||||||| | |  | || ||| ||||||||||||||| || ||||||||  | |||||    
T  983320 ttaagtacagacctgactttgttagggatttacttttagatatattcagactgacgggattatcagtgaagaaggaggcgtcggtgaacttcctaactga 983221  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  983220 cccactagatagaagat 983204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 599 - 747
Target Start/End: Original strand, 25119917 - 25120064
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| ||||| |||||   |||||||||||||||||||||||||||| |||||||||   ||||||| ||| ||||||  ||||  | |||||     
T  25119917 aaaatgttaacaagtgccctaaagacattgtttaagcatataaaagtagcaac-ttttgcattataaattgtatggttataactttaacatatatttgaa 25120015  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaatacc 747  Q
    || | |||||||  || ||| ||||||  ||| ||||||||||||||||    
T  25120016 ttgtattttcaagacacaatttctttttgtggattccttaaacaatacc 25120064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 3676985 - 3676898
Alignment:
Q  99 gatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaa 186  Q
    ||||| ||||||||||||||||| |||| | || ||| | |||||||||||||  ||||||||||  ||||||||||| |||||||||    
T  3676985 gatgtactttttgatatattcagacgggcgggaatatcaatgaagaaggaggcacctgtgaacttcctgactgacccaatagatagaa 3676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 43857230 - 43857129
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    ||||||||| ||| || |||||||||||||||||||| |||||   ||||||||||   |||||||||| ||||||  || ||| |||||||||||||||    
T  43857230 catgactttattagggttgtcctttttgatatattcaagcgggcaggagtattagt---gaaggaggcc-ctgtgagtttcttggctgacccactagata 43857135  T
Q  184 gaagat 189  Q
    ||||||    
T  43857134 gaagat 43857129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 19277658 - 19277548
Alignment:
Q  79 acattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccact 178  Q
    |||| ||||||||||||| |||||| |||||| ||||| |||| ||||   || ||| |||||||||||||||  || | |||||  |||||||| ||||    
T  19277658 acatacatgactttgttagggatgttcttttttatatactcagacgggcaggaatatcagtgaagaaggaggcacctataaacttcctgactgacgcact 19277559  T
Q  179 agatagaagat 189  Q
    |||||||||||    
T  19277558 agatagaagat 19277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 1249735 - 1249658
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatc 340  Q
    ||||||||||| |||| ||| ||||||||  || |||||||||||||  |||||||||||||||||||| ||| ||||    
T  1249735 cttttacggtaggatagacagccctaaaacctgcgtcaaataaagtggtcaaacatgagaaagcgtgttttgataatc 1249658  T

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Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 625 - 754
Target Start/End: Original strand, 28646616 - 28646744
Alignment:
Q  625 attgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttt 724  Q
    ||||||||||||||||||||||||||| |||| |||||  ||||||||||| || |||  ||||| | |||||||||| |||| ||  |||||| |||||    
T  28646616 attgtttaagcatataaaagtagcaac-ttttacattggaaattgtacggttatgactttaacaaatttttgacttatatttttaagacataatttcttt 28646714  T
Q  725 tcatgggttccttaaacaatacctttaaga 754  Q
    |  | | ||| |||||||||| | ||||||    
T  28646715 ttgtagattctttaaacaatatccttaaga 28646744  T

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Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 40726479 - 40726556
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttc 381  Q
    |||||| |||||||| | |||  ||||||||||||||||| ||||||||||||||||| || || |||||| ||||||    
T  40726479 aaagtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacactttcggcttc 40726556  T

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Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 599 - 770
Target Start/End: Original strand, 45662210 - 45662378
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    ||||||||||  |||||| |||| | ||||||||||||| ||||||||  || |||||  ||||  ||||| ||||| || |||  ||||  ||| ||||    
T  45662210 aaaatgttaacgagtgtcttaagggtattgtttaagcatctaaaagtaataa-tttttatattggaaattgcacggttatgactttaaca--tgtatgac 45662306  T
Q  699 ttattttttcaaagcataatatcttttcatggg-ttccttaaacaatacctttaagacacatgttaataagac 770  Q
    |||| |||||||| |||||| |||||| ||||| |||||||||||||||  ||||||||| |||||| |||||    
T  45662307 ttatattttcaaa-cataatttctttttatgggattccttaaacaatactcttaagacacttgttaacaagac 45662378  T

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Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 3676767 - 3676675
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
    ||||||||| || |||||  ||||||  ||||||| |||||||||||||| || |||||  || ||||||||||||||||| || ||||||||    
T  3676767 ccctaaaagctgcgtcaagcaaagtggtcaaacatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgacacttttg 3676675  T

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Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 42295190 - 42295240
Alignment:
Q  311 ccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||| ||||||| | |||||||||||||| |||||||||||||||||    
T  42295190 ccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttg 42295240  T

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Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 9281138 - 9281187
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||||||||||||||||| ||||||||| || |||||||| |||||    
T  9281138 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttg 9281187  T

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Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 9292109 - 9292158
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||||||||||||||||| ||||||||| || |||||||| |||||    
T  9292109 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttg 9292158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 10905245 - 10905153
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttgg 377  Q
    ||||||||| || |||||  |||||| ||||| ||||||||  ||||||||||| ||||| ||  |||||||||||||||| || |||||||||    
T  10905245 ccctaaaagctgcgtcaagcaaagtggccaaatatgagaaaaagtgttctgacactcaacatg-ctttataccatttgcttttgacacttttgg 10905153  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 2904465 - 2904393
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||||||| ||||| |||||||||| || ||||||| |||||| || || ||  ||||||||||||    
T  2904465 caaacatgagaaagcatgttccgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttccta 2904393  T

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Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 4501629 - 4501513
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  || |||||| ||| |||||| |||||||||||||||||   || | |||||| | ||||||| ||||    |||||||||  ||| |||    
T  4501629 ttaagtacacacacgactttattagggatgtactttttgatatattcagataggcgggagtatcaatgaagaaagaggtgcttgtgaacttcctgaatga 4501530  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  4501529 cccactagatagaagat 4501513  T

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Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 24527961 - 24527845
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||| | |||||| ||||||||||||||||| | ||   || ||| |||||||||||||||  || |||||||  | ||||     
T  24527961 ttaagtacagacatgactttgtgagggatgtactttttgatatattcagactggcaggaatatcagtgaagaaggaggcgactatgaacttcctaactgg 24527862  T
Q  173 cccactagatagaagat 189  Q
    |||||||| | ||||||    
T  24527861 cccactaggtcgaagat 24527845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 45974731 - 45974791
Alignment:
Q  388 atgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||| ||| ||||||||||||||||||||||||  ||||  ||||| ||||||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttacaaggataaattttgtcatccaaaa 45974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 700
Target Start/End: Original strand, 5081735 - 5081837
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| |||||  || |||||||| ||| ||||||||||||| |||| |||||| | ||||| ||| || |||  | ||||||||||    
T  5081735 ggaaaatgttaacaagtgccctaaaggcgttgtttaaacatctaaaagtagcaac-ttttacattgaaatttgtagggttatgactttatcaagtgtttg 5081833  T
Q  697 actt 700  Q
    ||||    
T  5081834 actt 5081837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Original strand, 34067862 - 34067940
Alignment:
Q  305 aagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||||||||||||| ||||| ||||||||||| | ||| ||| |||||||  | || ||||||||| ||||||    
T  34067862 aagtgaccaaacatgagaaagtgtgttttgacaatcaacat-tttctatgccatttgtatttgacacttttggtttccta 34067940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 48539158 - 48539096
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| ||| ||||| ||||||||||||||||||  |||||| ||||  |||||||||    
T  48539158 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaa 48539096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 34772882 - 34772829
Alignment:
Q  311 ccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    ||||| ||||||||| |||||| |||||| ||  ||||||||||||||||||||    
T  34772882 ccaaatatgagaaagtgtgttcggacaattaatatgtttttataccatttgctt 34772829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 43856853 - 43856800
Alignment:
Q  384 aacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgatttt 437  Q
    |||||||||||||||| ||||| |||||||||| |||||||  | |||||||||    
T  43856853 aacaatgtcatgactcctaggtccatgaatgttatgtttacgagaattgatttt 43856800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 3e-41; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 596 - 770
Target Start/End: Original strand, 223863 - 224036
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    ||||||||||||| |||| || |||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||| ||| ||||||||    
T  223863 aggaaaatgttaacaagtatcttaagagcattgtttaagcatctaaaagtagcaa-tttttgcattgaaaattgtacggttataacttcaataagtgttt 223961  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    ||||||| ||||||| | ||||| |||||| ||| |||||||||||||| | |||| | ||| |||||| |||||    
T  223962 gacttatattttcaaggtataatttctttttatgagttccttaaacaatgcatttagggcacttgttaacaagac 224036  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 594 - 725
Target Start/End: Original strand, 9047570 - 9047700
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||| |||| |||||| ||||||||||| || |||  |||||||||    
T  9047570 taaggaaaatgttaacaagtgtcctaagagcattgtttaatcatataaaagtaacaac-ttttacattgaaaattgtacggttatgactttaacaagtgt 9047668  T
Q  694 ttgacttattttttcaaagcataatatctttt 725  Q
    ||||||| | |||||||| |||||| ||||||    
T  9047669 ttgacttgtattttcaaaacataatttctttt 9047700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 595 - 744
Target Start/End: Complemental strand, 36904108 - 36903960
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtt 694  Q
    |||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||  ||||||||||| || |||  || |||||||    
T  36904108 aaggaaaatgctaacaagtgtcctaagggcattgtttaagcatctaaaagtagcaac-ttttgcattggaaattgtacggttatgactttaataagtgtt 36904010  T
Q  695 tgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||||| | |||||||  |||||| ||||||  |||||||||||||||||    
T  36904009 tgacttgtattttcaagacataatttctttttgtgggttccttaaacaat 36903960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 197 - 384
Target Start/End: Original strand, 4412953 - 4413145
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||| ||||| ||||||||  |||||| |||||| ||||||||| |    ||  ||||||| ||| || |  || ||||||||    
T  4412953 atgggtaggtggaaaacatgcttgtgtagacttgactggggtttcaccacttgtgggattaagtgtcagaccttttaccgtaggacaggcaaccctaaaa 4413052  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    | ||||||||  |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  4413053 gctgtgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttccta 4413145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 9685151 - 9685265
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| ||||| ||||||||||| |||| |  ||||||||||||||||||||| |||||||||||  |||||||    
T  9685151 ttaagtacagacatgactttgttagggatgtacttttcgatatattcagacgggcggaagtattagtgaagaaggaggcttctgtgaacttcctgactga 9685250  T
Q  173 cccactagatagaag 187  Q
    |||||||||||||||    
T  9685251 cccactagatagaag 9685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 19161670 - 19161852
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| |||||||   |||||| |||||| ||| |||||    | ||| |||||| |||| || ||||||||||||||    
T  19161670 atgggtaggaggaaaacatgcatgtgtagacttgaatagggtttcaccacttgtgagattagatgtcaggccttttatggtaggacatacatccctaaaa 19161769  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
      || |||||  ||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  19161770 tctgcgtcaagaaaagtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttt 19161852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 28225210 - 28225028
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||||||||||   |||||| || ||| ||||| |||    | ||||||||||||||| || | ||| |  |||||| || |||||    
T  28225210 ggaaaacatgcatgtgtggacttgaatggggtttcactacttgtgggcttaggagttagggcttttacggtaggacaaacaactttaaaagctgcgtcaa 28225111  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||| || |||||| |||||||||    
T  28225110 gcaaagtgaccaaatatgagaaagcgtattctgacaatcaacatgcttttataccatttgcttttgacactttcggcttccta 28225028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 20142476 - 20142592
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| ||||||||||||||||| |||| | || ||| ||||||||||||||| ||| |||||||  |||||||    
T  20142476 ttaagtacagacatgactttgttagggatgtactttttgatatattcagacgggcgggaatatcagtgaagaaggaggcgtctatgaacttcctgactga 20142575  T
Q  173 cccactagatagaagat 189  Q
    |||| ||||||||||||    
T  20142576 cccagtagatagaagat 20142592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 4412813 - 4412918
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    ||||||||||||| |||||| ||||||||||||||||  |||| | || ||| |||||||||||||||  ||||||||||  ||||||||||||||||||    
T  4412813 catgactttgttagggatgtactttttgatatattcaaacgggcgggaatatcagtgaagaaggaggcacctgtgaacttcctgactgacccactagata 4412912  T
Q  184 gaagat 189  Q
    ||||||    
T  4412913 gaagat 4412918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 41867644 - 41867760
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  | ||||||||||| |||||| ||||||||||||||||  |||| | || ||| |||||||||||||||  ||||||||||  |||||||    
T  41867644 ttaagtacagacgtgactttgttagggatgttctttttgatatattcatacgggcgggaatatcagtgaagaaggaggcacctgtgaacttcctgactga 41867743  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  41867744 cccactagatagaagat 41867760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 2888644 - 2888541
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    |||||||||||| ||| |  ||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||| | || || |||||||||||||||    
T  2888644 ccctaaaagttgcgtctagcaaagtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgacacttttggcttcct 2888545  T
Q  384 aaca 387  Q
    ||||    
T  2888544 aaca 2888541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 599 - 776
Target Start/End: Complemental strand, 38402679 - 38402503
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||| ||| |||||  |||||| ||||||||| |||| ||||||||||||||||| | ||||  ||||||||||| || |||  || |||||||| ||    
T  38402679 aaaatgctaacaagtgctctaagaacattgtttaggcatctaaaagtagcaactttt-gtattggaaattgtacggttatgactttaagaagtgtttaac 38402581  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaa 776  Q
    || | |||||||| |||||| |||||| |||| ||||||||||||| || ||| ||||| |||||  ||||| |||||    
T  38402580 ttgtattttcaaaacataatttctttttatggattccttaaacaatgcccttatgacacttgttagcaagaccctaaa 38402503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 17345009 - 17344893
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  || |||||||||| |||||| ||||||||||||||||| ||||   |||||| |||||||||||||||  ||||||||||  |||||||    
T  17345009 ttaagtacagacacgactttgttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaaggaggcgcctgtgaactttctgactga 17344910  T
Q  173 cccactagatagaagat 189  Q
    ||| ||||| |||||||    
T  17344909 cccgctagaaagaagat 17344893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 590 - 770
Target Start/End: Complemental strand, 39791683 - 39791504
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaa 689  Q
    ||||| || |||||||||| || |||| |||  | |||||||||||||||||||||||||| |||||  |||   ||||||||| |||| |||  |||||    
T  39791683 aaaattagaaaaatgttaacaaatgtcttaaaggtattgtttaagcatataaaagtagcaa-tttttatattagaaattgtacgataatgactttaacaa 39791585  T
Q  690 gtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
     |||||||||| | |||||||| |||||| ||||||  ||| ||| |||||||||||| ||| ||||| |||||| |||||    
T  39791584 atgtttgacttgtattttcaaaacataatttctttttgtggattctttaaacaatacccttaggacacttgttaacaagac 39791504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 197 - 376
Target Start/End: Original strand, 9685302 - 9685486
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||  ||||| ||||||||  |||||| |||||| ||||||||| |    ||  ||||||| ||| ||||  || ||||||||    
T  9685302 atgggtaggtggaaaacatgattgtgtagacttgactggggtttcaccacttgtgggattaggtgtcagaccttttaccgtaggataggcagccctaaaa 9685401  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
       | |||||  |||||| |||||||||| |||||||||||||||||||||| || ||||||||||||||||| || ||||||||    
T  9685402 tccgcgtcaagcaaagtggccaaacatgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttg 9685486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 34814811 - 34814878
Alignment:
Q  297 gtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  34814811 gtcaaataaagtgatcaaacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctt 34814878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 769
Target Start/End: Complemental strand, 6563193 - 6563052
Alignment:
Q  625 attgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttt 724  Q
    ||||||||||||||||||||||   |||||||| ||||  |||||| |||| |||| | ||| |||||||||| |||| |||| |||  ||||| | |||    
T  6563193 attgtttaagcatataaaagta---actttttgtattgtaaattgtgcggttataatttcaataagtgtttgatttatatttttaaaatataattttttt 6563097  T
Q  725 tcatgggttccttaaacaatacctttaagacacatgttaataaga 769  Q
    | ||||||||||||||||||| | ||||||||  |||||| ||||    
T  6563096 ttatgggttccttaaacaatatccttaagacatttgttaacaaga 6563052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 44686789 - 44686671
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||| | |||||||   |||| ||||||||||||||||| |||| | |||||| ||||||||||||||   ||||||||||  |||||||    
T  44686789 ttaagtacatgcatcattttgttagatatgtactttttgatatattcagacgggcgggagtatcagtgaagaaggaggggcctgtgaactttgtgactga 44686690  T
Q  173 cccactagatagaagattg 191  Q
     | ||||||||||||||||    
T  44686689 tctactagatagaagattg 44686671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 28225371 - 28225258
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||| ||  | ||||||  ||||||| |||||   ||||||||||  ||||| |    
T  28225371 ttaagtacaggcatgactttgttagggatgtactttttgatatattcaggtggtcgggagtatcggtgaagagggaggtgcctgtgaactttctgactta 28225272  T
Q  173 cccactagatagaa 186  Q
    ||||||||||||||    
T  28225271 cccactagatagaa 28225258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 287 - 384
Target Start/End: Original strand, 41867890 - 41867987
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| || |||||  ||||||  ||||||||||||||| |||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  41867890 taaaagctgcgtcaagcaaagtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacactttcgggttccta 41867987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 599 - 770
Target Start/End: Complemental strand, 19955220 - 19955050
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| |||| | ||||  | ||| ||||||||||||||||||||||||||||  ||||  |||| || | | || |||  |||||||||||||     
T  19955220 aaaatgttaacaagtattctaaaggtattatttaagcatataaaagtagcaactttttt-attggaaattatatgattatgactttaacaagtgtttgat 19955122  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    || | |||||||| |||||| ||||||  ||||||||||||||||| |  ||||| ||| |||||| |||||    
T  19955121 ttgtattttcaaaacataatttctttttgtgggttccttaaacaatgctcttaaggcacttgttaacaagac 19955050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 44686628 - 44686490
Alignment:
Q  207 gaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaaa 302  Q
    |||||||||||||||||||||||||  |||||| |||||| ||||| ||| | |    |||||||||| || || | |||  |||||||| || |||||     
T  44686628 gaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcggggcttttacgataggacagacagtcctaaaagctg-gtcaag 44686530  T
Q  303 taaagtgaccaaacatgagaaagcgtgttctgacaatcaa 342  Q
     || ||| ||||||||||||||||||||||||||||||||    
T  44686529 caatgtggccaaacatgagaaagcgtgttctgacaatcaa 44686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 599 - 668
Target Start/End: Original strand, 3002345 - 3002414
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaatt 668  Q
    ||||| |||| |||| ||||||| | |||||||||||||||||||||||||| |||||||||||| ||||    
T  3002345 aaaatattaacaagtatcctaagggaattgtttaagcatataaaagtagcaattttttgcattgaaaatt 3002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 374
Target Start/End: Complemental strand, 5532627 - 5532457
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    |||||||||||||||| |||| ||| | |||| ||||||| | |||||| | |    || |||||||||| || || || ||||||||| || |||||      
T  5532627 aaaacatgcatgtgtgaacttaaccggagtttcaccactcataggattaggggtcggggattttacggtaggacatgcagccctaaaagctgcgtcaagc 5532528  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||  ||||||||||||| |||||| ||||||||||| || |||||||| |||| ||| || ||||||    
T  5532527 aaagtggtcaaacatgagaaaacgtgttgtgacaatcaacatgcttttatactatttacttttgacacttt 5532457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 23484917 - 23484994
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||||| |  |||||| |||||| ||||| |||||||||| |||||||||||||||| || ||||||||||||||    
T  23484917 ccctaaaagctacgtcaaacaaagtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttg 23484994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 364
Target Start/End: Original strand, 18744841 - 18745013
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| |||||| ||||||||| |    ||| | ||||| |||| | |   | |||| |||    
T  18744841 atgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggtgtcaggccatttaccgtaacacaggaagcccttaaa 18744940  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    |  | ||||| | | ||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||||    
T  18744941 gcagcgtcaagttaggtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgctt 18745013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 628 - 751
Target Start/End: Complemental strand, 41283450 - 41283329
Alignment:
Q  628 gtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttttca 727  Q
    |||||| ||| ||||||||  ||||||| | ||||| ||||||||||| ||||||  ||||| | |||||||||| ||||||| | ||||| |||||| |    
T  41283450 gtttaaacatctaaaagtattaactttt-gtattgaaaattgtacggttataactt-aacaaatatttgacttatattttcaaggtataatttcttttta 41283353  T
Q  728 tgggttccttaaacaataccttta 751  Q
    || |||||||||||||||| ||||    
T  41283352 tgagttccttaaacaatactttta 41283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 27502721 - 27502623
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagat 182  Q
    ||||| |||||||  ||||| |||||||||||||||| | | | | |||||| | |||||||||||||  ||||||||||  |||||||||||||||||    
T  27502721 catgattttgttagagatgtactttttgatatattcaagtgagcgggagtatcactgaagaaggaggcgcctgtgaactttctgactgacccactagat 27502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 33612555 - 33612629
Alignment:
Q  313 aaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    |||||||||||| |||||| ||||||||||| || |||||||| |||||  | || |||||||||||||||||||    
T  33612555 aaacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcctaaca 33612629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 17344618 - 17344553
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||  ||||||||||||  ||||||||    
T  17344618 taacaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttttcgatccaaaa 17344553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 374
Target Start/End: Complemental strand, 17344858 - 17344676
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| || ||| ||||||||| |    ||  ||||||| ||| || |  ||  ||| |||    
T  17344858 atgggtaggaggaaaacatgcatgtgtagacttgactggggtttcacaacttgtgggattaggtgtcagaccttttaccgtaggaaagccagtccttaaa 17344759  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    | || ||||| ||| ||| ||||||| |||||| |||||| | ||||||||| || ||||||||||||||||| || ||||||    
T  17344758 gctgcgtcaagtaaggtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttataccatttgcttttgacacttt 17344676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 29808199 - 29808123
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    |||||||||  |||| |||||| ||||||||||||| |||||||| | ||||||||| || |||||||||||||||||    
T  29808199 taaaagttgcctcaagtaaagtcaccaaacatgagacagcgtgttataacaatcaacatg-ttttataccatttgctt 29808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 5532797 - 5532674
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaactt-----gt-- 165  Q
    |||||||||  ||| | |||||||  |||||| ||||| |||||||||| || | | |||||| |||||||||||||||| ||||||||||     ||      
T  5532797 ttaagtacaaacataaatttgttagagatgtcatttttaatatattcagacgagcgggagtatcagtgaagaaggaggcccctgtgaacttccttagtcc 5532698  T
Q  166 tgactgacccactagatagaagat 189  Q
    ||||||||||||||||||||||||    
T  5532697 tgactgacccactagatagaagat 5532674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 33612277 - 33612328
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcg 124  Q
    |||||||||| ||||||||||| | |||||| ||||||||||||||||||||    
T  33612277 ttaagtacatacatgactttgtcagggatgttctttttgatatattcaggcg 33612328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 19161577 - 19161635
Alignment:
Q  131 agtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    ||||||||||||||||||||| ||||||||| |  | ||||||||| ||||||||||||    
T  19161577 agtattagtgaagaaggaggcgtctgtgaacgtcctaactgacccattagatagaagat 19161635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 3826087 - 3825982
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    |||| ||||||||  |||||| ||||||||||||| |  || | |  ||| | ||| ||||| ||||| |||||||||||  ||||||||||||||||||    
T  3826087 catgcctttgttagagatgtcatttttgatatatttaaacgagcggaagtgtcagttaagaaagaggcatctgtgaactttctgactgacccactagata 3825988  T
Q  184 gaagat 189  Q
    ||||||    
T  3825987 gaagat 3825982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 18744690 - 18744803
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| || |||||||||| |||| | ||||||||||||||||| ||||   |||||| ||| |||||| |||   ||||||| ||  |||||||    
T  18744690 ttaagtacatacacgactttgttagggatatactttttgatatattcagacgggcaggagtatcagtaaagaagaaggtgcctgtgaatttcctgactga 18744789  T
Q  173 cccactagatagaa 186  Q
    ||| ||||| ||||    
T  18744790 cccgctagaaagaa 18744803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 5532399 - 5532336
Alignment:
Q  384 aacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||| |||||||| || |||||||||||| ||||||||  ||||||||||| ||||||||||    
T  5532399 aacaatgccatgactcctaagttcatgaatgt-gtgtttacaaggattgattttctcatccaaaa 5532336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 387
Target Start/End: Original strand, 13147104 - 13147182
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgt---gtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    |||||||||||||||||||||||||||||| | |    ||||||||||||||| || || ||||||||| || ||||||    
T  13147104 caaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttttctaaca 13147182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 13146927 - 13146986
Alignment:
Q  130 gagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    |||||||| ||||||| ||||| |||||||||||  ||| | ||||||||||||||||||    
T  13146927 gagtattaatgaagaatgaggcgtctgtgaacttcctgattaacccactagatagaagat 13146986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 1296031 - 1296101
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttatacc 356  Q
    ||||||| || |||||| ||| || ||||||||||||||   |||||||||||| ||| ||||||||||||    
T  1296031 ctaaaagctgcgtcaaacaaaatggccaaacatgagaaaatatgttctgacaataaacatgtttttatacc 1296101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 598 - 655
Target Start/End: Original strand, 1758433 - 1758490
Alignment:
Q  598 gaaaatgttaataagtgtcct-aagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||||||||||||||| || |||| |||||||||||||| ||||||||| |||||||    
T  1758433 gaaaatgttaataagtgttcttaaga-cattgtttaagcatctaaaagtagtaactttt 1758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 743
Target Start/End: Complemental strand, 4428895 - 4428778
Alignment:
Q  625 attgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttt 724  Q
    ||||||||||||| |||  ||||||||||||  |||||| |||| |||||| || |||  || || | |||||||||| | |||||  |||||| |||||    
T  4428895 attgtttaagcatctaattgtagcaactttta-cattgaaaattatacggttatgactttaataaatatttgacttatatcttcaagacataatttcttt 4428797  T
Q  725 tcatgggttccttaaacaa 743  Q
    | |||| ||||||||||||    
T  4428796 ttatggattccttaaacaa 4428778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 285 - 343
Target Start/End: Original strand, 16351821 - 16351879
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaac 343  Q
    |||||||||||||||||  ||||||  |||||||||||||  ||||||| |||||||||    
T  16351821 cctaaaagttgtgtcaagcaaagtggtcaaacatgagaaaatgtgttctcacaatcaac 16351879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 44720424 - 44720374
Alignment:
Q  311 ccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||||| ||| |||||| ||||||||||| |||||||||||| ||||    
T  44720424 ccaaacatgaaaaaacgtgttatgacaatcaacatgtttttataccgtttg 44720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 7760743 - 7760796
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga 259  Q
    ||||||||| |||||||| |||||||  |||||| |||||| ||||||||||||    
T  7760743 ggaaaacatacatgtgtgaacttgactagggtttcaccacttgtgggattatga 7760796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 5e-37; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 597 - 744
Target Start/End: Complemental strand, 37624971 - 37624825
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| | ||||  |||||||||||||| ||||||||| ||||||| ||||||| ||||||||||| ||||||  ||||||||||||    
T  37624971 ggaaaatgttaacaagtgccttaaggacattgtttaagcatctaaaagtagtaactttt-gcattgaaaattgtacggttataactttaacaagtgtttg 37624873  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||||| |||||||||||| || |||||| ||||||||||||||||||    
T  37624872 acttatattttcaaagcattatttctttttatgggttccttaaacaat 37624825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 596 - 744
Target Start/End: Complemental strand, 35808835 - 35808688
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    ||||||||||||| ||||| | ||||  |||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||| |||| |||||||    
T  35808835 aggaaaatgttaacaagtgccataaggacattgtttaagcatctaaaagtagcaactttt-gcattgaaaattgtacggttataacttcaactagtgttt 35808737  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||||| |||||||   ||||| |||||| ||||||||||||||||||    
T  35808736 gacttatattttcaagatataatttctttttatgggttccttaaacaat 35808688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 590 - 778
Target Start/End: Original strand, 9093547 - 9093734
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaa 689  Q
    |||| |||||||||||||| |||||   |||| | ||||||||||  | ||||||||| || |||||||||||| ||||||||||| ||||||  |||||    
T  9093547 aaaaaaaggaaaatgttaacaagtgctttaagggtattgtttaagtctctaaaagtagtaa-tttttgcattgaaaattgtacggttataacttaaacaa 9093645  T
Q  690 gtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaaaa 778  Q
    ||||||||||||| ||||||| ||| ||| |||||| ||||||||||||||||||  | ||| ||||| |||||| ||||| |||||||    
T  9093646 gtgtttgacttatattttcaaggcaaaatttctttttatgggttccttaaacaatgtccttaggacacttgttaacaagaccctaaaaa 9093734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 53619796 - 53619614
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| |||    || |||||||||| ||| || |  || ||||||||| || |||||    
T  53619796 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttagaggtgggggcttttacagtaggacaggcaaccctaaaagctgcgtcaa 53619697  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||| |||||||||||||| |||||||||||||||||| || |||||||||||||| || || |||||||| |||||||    
T  53619696 gcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttccta 53619614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 3330321 - 3330205
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||| | | |||||| |||||||||||||||  ||||||||||  |||||||    
T  3330321 ttaagtacaggcatgactttgttagggatgtactttttgatatattcaggcgagcgggagtatcagtgaagaaggaggcacctgtgaactttctgactga 3330222  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  3330221 cccactagatagaagat 3330205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 31847297 - 31847115
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| |||    || |||||||||| ||| || |  || ||||||||| || |||||    
T  31847297 ggaaaacatgcatgtgtggacttgactagggtttcaccacttgtgggtttaggggtgggggcttttacagtaggacaggcagccctaaaagctgcgtcaa 31847198  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||||||  ||||||||||||| | |||||||||| ||||| ||||||| |||||||||||| || ||||||||||||||||    
T  31847197 gcaaagtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccatttgcttttgacacttttggcttccta 31847115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 618 - 744
Target Start/End: Complemental strand, 3121180 - 3121056
Alignment:
Q  618 taagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataa 717  Q
    |||| ||||||||||||||| |||||||||| |||||  ||||||| ||||||||||| |||||| |||||| || ||||||||| |||||||  |||||    
T  3121180 taagggcattgtttaagcatctaaaagtagcgacttt--gcattgaaaattgtacggttataacttcaacaaatgattgacttatattttcaagacataa 3121083  T
Q  718 tatcttttcatgggttccttaaacaat 744  Q
    | |||||| ||||||||||||||||||    
T  3121082 tttctttttatgggttccttaaacaat 3121056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 597 - 740
Target Start/End: Original strand, 16958335 - 16958477
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| |||||||  ||| ||||||||||||||| ||||||||||||| |||| |||||  ||||| ||| | |||||| |||||||||||||    
T  16958335 ggaaaatgttaacaagtgtcgcaagggcattgtttaagcatctaaaagtagcaac-ttttacattggaaattgcacgtttataacttcaacaagtgtttg 16958433  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaa 740  Q
    |||||| |||||||  |||||| |||||| |||| |||||||||    
T  16958434 acttatattttcaagacataatttctttttatggattccttaaa 16958477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 594 - 744
Target Start/End: Complemental strand, 41622059 - 41621910
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    ||||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| | || |||  ||||||||     
T  41622059 taaggaaaatgttaacaagtgccataagggcattgtttaagcatataaaagtagcaac-ttttacattgaaaattgtacgattatgactttaacaagtga 41621961  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||| || | |||||||  |||||| ||||||  |||||||||||||||||    
T  41621960 ttgatttgtattttcaagacataatttctttttgtgggttccttaaacaat 41621910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 206 - 380
Target Start/End: Original strand, 50000822 - 50001001
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| | |    || |||||||||||||| || | ||| | ||||||| || |||||    
T  50000822 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggttaaggggtgggggcttttacggtaggacagacagctctaaaagctgcgtcaa 50000921  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtg-tttttataccatttgcttctggcacttttggctt 380  Q
      ||||||  |||||||||||||||||||||||||||||||| || |||| |||| |||||||| || ||||||||||||    
T  50000922 gcaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatttgcttttgacacttttggctt 50001001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 597 - 770
Target Start/End: Complemental strand, 52270608 - 52270436
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||  |||||||||   || |||  ||||||||||||    
T  52270608 ggaaaatgttaacaagtgccctaagggcattgtttaagcatataaaaatagcaac-ttttgcattggaaattgtacgagtatgactgtaacaagtgtttg 52270510  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    |||||| |||||||  |||| | || |||  ||||||||||||||||| || ||| | ||| |||||| |||||    
T  52270509 acttatattttcaagacatattttccttttgtgggttccttaaacaatgcccttagggcacttgttaacaagac 52270436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 50000672 - 50000777
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    ||||||||||||| |||||| |||||||||||||||||||| |   |||||| | |||||||||||||  ||||||||||  ||||||||||||||||||    
T  50000672 catgactttgttaaggatgtactttttgatatattcaggcgagcaggagtatcaatgaagaaggaggcgcctgtgaactttctgactgacccactagata 50000771  T
Q  184 gaagat 189  Q
    ||||||    
T  50000772 gaagat 50000777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 55933416 - 55933541
Alignment:
Q  259 agggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccat 358  Q
    ||||||||||||||| || |  || |||||||||||| |||||| |||||| |||||||||||||||  |||||| ||||||||| || |||||||||||    
T  55933416 agggcttttacggtaggacagtcagccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccat 55933515  T
Q  359 ttgcttctggcacttttggcttccta 384  Q
    |||||| || |||||| | |||||||    
T  55933516 ttgcttttgacactttcgacttccta 55933541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 597 - 769
Target Start/End: Original strand, 31861526 - 31861695
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| || || || ||| ||||||||||||||| ||||| ||||||||||| ||||||  |||||| |||| |||| |  ||||||||||||    
T  31861526 ggaaaatgttaacaaatgccc-aagggcattgtttaagcatctaaaa-tagcaactttt-gcattggaaattgtccggttataattttaacaagtgtttg 31861622  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataaga 769  Q
    |||||| |||||||  |||||| |||||| |||| |||||||||||||||  ||| ||||| |||||| ||||    
T  31861623 acttatattttcaagacataatttctttttatggattccttaaacaatactcttaggacacttgttaacaaga 31861695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 600671 - 600774
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    ||||||||||| ||||||  ||||||||||||||||||||| |||||||| ||||| ||| || ||||||||||||||||| || |||||| || |||||    
T  600671 ccctaaaagttatgtcaagcaaagtgaccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgcttttgtcactttcggtttcct 600770  T
Q  384 aaca 387  Q
    ||||    
T  600771 aaca 600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 34952542 - 34952464
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggc 151  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||    
T  34952542 ttaagtacatacatgactttgttagggatgtcatttttgatatattaaggcgggcgagagtatcagtgaagaaggaggc 34952464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 56462004 - 56462185
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||   ||||| |||| | || |||||| | |    | ||||||||||   ||| ||  |||||||||||| |||||    
T  56462004 ggaaaacatgcatgtgtggacttgactgaggtttcaccatttgttggattaggggtcgagacttttacggttgtatagaccaccctaaaagttgcgtcaa 56462103  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    | |||||| | |||||||| |||||||||||||||||||||| ||||||||||||||||| ||  | ||||||||| ||||||    
T  56462104 acaaagtggc-aaacatgataaagcgtgttctgacaatcaacatgtttttataccatttgttttagacacttttggtttccta 56462185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 12918109 - 12918224
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    ||||||||||  |||||||||||| |||||| |||||||||||||||||||||| | ||| ||||||||| ||||| |   ||||||||||  | |||||    
T  12918109 ttaagtacatgtatgactttgttagggatgtactttttgatatattcaggcgggcgggagcattagtgaa-aaggatggacctgtgaactttctaactga 12918207  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  12918208 cccactagatagaagat 12918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 596 - 744
Target Start/End: Original strand, 25231478 - 25231625
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    |||||||| |||  ||||| | |||| |||| ||| |||||| ||||| ||||||||||| ||||||  ||||||||||| |||||| |||||| | |||    
T  25231478 aggaaaatattagcaagtgccttaagggcatggttcaagcatctaaaactagcaactttt-gcattggaaattgtacggttataacttcaacaaatattt 25231576  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||||| |||||||  |||||| |||||| |||| |||||||||||||    
T  25231577 gacttatattttcaagacataatttctttttatggattccttaaacaat 25231625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 30940718 - 30940793
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||| || ||||||||||||    
T  30940718 ccctaaaagttgcgtcaagtaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatt 30940793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 598 - 733
Target Start/End: Complemental strand, 43595121 - 43594987
Alignment:
Q  598 gaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttga 697  Q
    ||||||||||| ||||   |||||| |||||||||||||| ||||||||||||| ||||| ||||| ||||||||||| |||||| ||| ||| |||| |    
T  43595121 gaaaatgttaacaagtactctaagaacattgtttaagcatctaaaagtagcaac-ttttgtattgaaaattgtacggttataacttcaagaagggtttaa 43595023  T
Q  698 cttattttttcaaagcataatatcttttcatgggtt 733  Q
    ||||  |||||||  |||||| |||||| |||||||    
T  43595022 cttacattttcaagacataatttctttttatgggtt 43594987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 12918269 - 12918451
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga----gggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||| | |||||  | |||| | |||| ||||||||| ||    |||||||||||||| || | ||| |||||||||||| |||||    
T  12918269 ggaaaacatgcatgtgtgtagttgactggagtttcatcacttgtgggattaagattcggggcttttacggtaggacaaacaaccctaaaagttgcgtcaa 12918368  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    | ||||||  ||||||| ||||| ||||||||||||||||||    |||||||| |||| ||| || |||||| | |||||||    
T  12918369 acaaagtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactatttacttttgacactttcgacttccta 12918451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 16957907 - 16957791
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||| ||| |||||| ||||||||||||||||| ||||   |||||| ||||| | |||||||  ||||||||||  |||||||    
T  16957907 ttaagtacatacatgacttttttagggatgtactttttgatatattcagacgggcaggagtatcagtgaggtaggaggcgcctgtgaacttcctgactga 16957808  T
Q  173 cccactagatagaagat 189  Q
    ||| ||||||| |||||    
T  16957807 cccgctagataaaagat 16957791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 597 - 744
Target Start/End: Original strand, 26876052 - 26876198
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||| ||| |||||  ||||| | ||||||||||||||||||||||||| | ||||| ||||  ||||||| ||| || |||  || |||||||||    
T  26876052 ggaaaatgctaacaagtgctctaagggtattgtttaagcatataaaagtagcagc-ttttgtattggaaattgtagggttatgactttaagaagtgtttg 26876150  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||| | |||||||  |||||| ||||||  |||||||||||||||||    
T  26876151 acttgtattttcaagccataatttctttttttgggttccttaaacaat 26876198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 30940508 - 30940591
Alignment:
Q  106 tttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    |||||||||||||||| |||| | || ||| |||||||||||||||  ||||||||||  ||||||||||||||||||||||||    
T  30940508 tttttgatatattcagacgggcgggaatatcagtgaagaaggaggcacctgtgaacttcctgactgacccactagatagaagat 30940591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 23255828 - 23255755
Alignment:
Q  288 aaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||| |||||  |||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  23255828 aaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttg 23255755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 618 - 745
Target Start/End: Complemental strand, 41735549 - 41735423
Alignment:
Q  618 taagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataa 717  Q
    |||| ||||||||||||||| |||||||||||| |||||| ||||  ||||||||| | || |||  |||||||||||||||| | |||||||  |||||    
T  41735549 taagggcattgtttaagcatctaaaagtagcaa-tttttgtattggaaattgtacgattatgactttaacaagtgtttgacttgtattttcaagacataa 41735451  T
Q  718 tatcttttcatgggttccttaaacaata 745  Q
    | ||||||  || ||| |||||||||||    
T  41735450 tttctttttgtgagtttcttaaacaata 41735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 597 - 743
Target Start/End: Original strand, 8680477 - 8680621
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| |||||  |||| |||||| | |||||||||| |||| ||||||||||  ||||||||| | || |||  ||||| |||||     
T  8680477 ggaaaatgttaacaagtgccctaaaggcatagtttaaacttataaaagtaccaac-ttttgcattggaaattgtacgattatgactttaacaaatgtttt 8680575  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaa 743  Q
    |||||| |||||||| |||| | || ||| |||||||||||||||||    
T  8680576 acttatattttcaaaacatattttccttt-atgggttccttaaacaa 8680621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 48506776 - 48506866
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaactt 163  Q
    |||||||||| ||||||||||||||||||||  ||||||||||| |||| |||  ||||||||  || |||||||||||  ||||||||||    
T  48506776 ttaagtacatacatgactttgttacggatgtattttttgatatactcagacggacgagagtatcggtaaagaaggaggcgcctgtgaactt 48506866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 25706879 - 25706764
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgaga-gtattagtgaagaaggaggcctctgtgaacttgttgactg 171  Q
    |||||||||| ||||||||||||| |||| |  ||||| ||| |||||||||| | ||| |||| |||||||||||||||   |||||||||  ||||||    
T  25706879 ttaagtacatgcatgactttgttagggatttttttttt-atacattcaggcgg-tcagaagtataagtgaagaaggaggcgcatgtgaactttctgactg 25706782  T
Q  172 acccactagatagaagat 189  Q
    ||||||||||||||||||    
T  25706781 acccactagatagaagat 25706764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 364
Target Start/End: Complemental strand, 26521698 - 26521536
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||| ||||||||||  | |||| | |||| ||||||||| |    ||  |||||| |||| || | ||| |||||||||||| |||||    
T  26521698 ggaaaacatgcatgtatggacttgactggagtttcatcacttgtgggattaggggtcagaccttttatggtaggacaaacaaccctaaaagttgcgtcaa 26521599  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    | |||||| | |||||||| ||| |||||| ||||||||||| || ||||||| ||| |||||    
T  26521598 acaaagtggctaaacatgaaaaaacgtgttatgacaatcaacatgcttttatatcatatgctt 26521536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 343
Target Start/End: Complemental strand, 53170727 - 53170576
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta--tgaggg--cttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||| ||||| ||||||||  |||||| ||||||||||||||||  ||  ||  ||||||| ||| || |  || ||||||||    
T  53170727 atgggtaggtggaaaacatgcttgtgtagacttgactggggtttcaccactcgtgggattaggtgtcggaccttttacagtatgacaggcagccctaaaa 53170628  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaac 343  Q
    || |||| |  ||||||  ||||||||||||||||||||||||||| |||||    
T  53170627 gtcgtgttaggtaaagtagccaaacatgagaaagcgtgttctgacagtcaac 53170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 26521843 - 26521743
Alignment:
Q  89 ctttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaaga 188  Q
    |||||||| |||||| |||||||||||||| || |||  |||||||| | ||||||| |||||   ||||| |||  |||||||||||||||||||||||    
T  26521843 ctttgttagggatgtactttttgatatatttagacggacgagagtatcattgaagaatgaggcgcatgtgagctttctgactgacccactagatagaaga 26521744  T
Q  189 t 189  Q
    |    
T  26521743 t 26521743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 31847423 - 31847340
Alignment:
Q  105 ctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagattg 191  Q
    |||||||||||||||||||| ||| |||||| |||||||   |||||  ||||||||||  |||||||||||||||||| |||||||    
T  31847423 ctttttgatatattcaggcgagtgggagtatcagtgaag---gaggcgcctgtgaactttctgactgacccactagataaaagattg 31847340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 25504665 - 25504550
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtccttttt-gatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactg 171  Q
    |||||||||  |||||||||||||  ||||| |||||| ||||||||||  |||| ||||| || ||||||||| |||||   ||||||||| ||||  |    
T  25504665 ttaagtacaaacatgactttgttagagatgtacttttttgatatattcaaacgggcgagagcatcagtgaagaacgaggcacatgtgaacttcttgatag 25504566  T
Q  172 acccactagatagaag 187  Q
    ||||||||||||||||    
T  25504565 acccactagatagaag 25504550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 597 - 763
Target Start/End: Complemental strand, 46737577 - 46737411
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataac-tccaacaagtgttt 695  Q
    |||||||| ||| ||| || ||||||||||| ||||||||||||||| || |||| ||||||||||| ||||||||| |  | || |  ||||| |||||    
T  46737577 ggaaaatgctaacaagcgttctaagagcattctttaagcatataaaaatatcaac-ttttgcattgaaaattgtacgattgtgacttttaacaaatgttt 46737479  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgtta 763  Q
     |||||| |||||||  ||| || ||||||  || ||||||||||||||  | ||||||||| |||||    
T  46737478 aacttatattttcaagacatgatttctttttgtgtgttccttaaacaatgtccttaagacacttgtta 46737411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 132513 - 132436
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||||| || |||||  ||| || | |||||||||||| |||||||||||||||||| || ||||||||||||||    
T  132513 ccctaaaagctgcgtcaagcaaaatggcaaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttg 132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 34536927 - 34536988
Alignment:
Q  300 aaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| |||||    
T  34536927 aaataaagtgaccaaacatgaaaaaacgtgttatgacaatcaacatatttttatactatttg 34536988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 50462928 - 50463017
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
    ||||||||| |||||  ||  |||||||||||||||||| || ||| |||||||||| || ||| ||||||||||||| || ||||||||    
T  50462928 taaaagttgcgtcaagcaagatgaccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgcttttgacacttttg 50463017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 132756 - 132642
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    ||||||| | |||||||||||||| |||||| ||||| ||||||||||||||||   ||||||||||||| || ||  |   ||||||||| |||||||     
T  132756 ttaagtataatcatgactttgttagggatgtactttt-gatatattcaggcgggcaggagtattagtgaaaaaaga-tcgcatgtgaacttcttgactgg 132659  T
Q  173 cccactagatagaagat 189  Q
     ||||||||||||||||    
T  132658 tccactagatagaagat 132642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 25504395 - 25504323
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||||| |||||||| |||||| || |||||||||||| ||||||| || || |||||| ||||||    
T  25504395 caaacatgagaaaacgtgttctaacaatcgacatgtttttataccgtttgcttttgacatttttggtttccta 25504323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 53170868 - 53170756
Alignment:
Q  74 taagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgac 173  Q
    ||||||||  ||||||||||| | |||||| |||||||||||  |||| ||||   || ||| ||||||||| ||||| |||||||||||  ||||||||    
T  53170868 taagtacagacatgactttgt-agggatgtactttttgatat--tcagacgggcaggaatatcagtgaagaaagaggcgtctgtgaacttcctgactgac 53170772  T
Q  174 ccactagatagaagat 189  Q
    | ||||||||||||||    
T  53170771 ctactagatagaagat 53170756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 594 - 769
Target Start/End: Complemental strand, 24504822 - 24504648
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    |||| ||||||||||||||||| |||  || ||||||||||||| ||||| || |||| ||||| ||| | ||||||||||| ||||||  || |||| |    
T  24504822 taagaaaaatgttaataagtgttctacaagtattgtttaagcatctaaaaatatcaac-ttttgtattaaaaattgtacggttataactttaataagtat 24504724  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataaga 769  Q
    ||||| ||| |||| ||   |||||   ||||  ||| |||||||||||||| | ||||| ||| |||||| ||||    
T  24504723 ttgacatatattttaaagatataattattttttttggattccttaaacaataaccttaaggcacttgttaacaaga 24504648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 16957646 - 16957580
Alignment:
Q  308 tgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||||||||||||||| ||| ||||| ||||||| || || |||||||||||||| || ||||||    
T  16957646 tgaccaaacatgagaaagtgtgctctgataatcaacatgcttatataccatttgcttttgacacttt 16957580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 629 - 745
Target Start/End: Complemental strand, 43142163 - 43142051
Alignment:
Q  629 tttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttttcat 728  Q
    ||||||||||||||||||  || |||||||||||  ||||||| ||| || |||  |||||   |||||||||| |||||||  |||||| ||||||  |    
T  43142163 tttaagcatataaaagtaataa-tttttgcattggaaattgtaaggttatgactttaacaa---tttgacttatattttcaagacataatttctttttgt 43142068  T
Q  729 gggttccttaaacaata 745  Q
    |||||||||||||||||    
T  43142067 gggttccttaaacaata 43142051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 744
Target Start/End: Complemental strand, 2168555 - 2168451
Alignment:
Q  639 taaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttttcatgggttcctta 738  Q
    |||||||| |||||||| ||||||| ||||||||||| |  |||  |||||||||||||||| | ||||||   |||||| | |||| |||||||| |||    
T  2168555 taaaagtaacaactttt-gcattgaaaattgtacggttacgactttaacaagtgtttgacttgtattttcaggacataatttatttttatgggttcttta 2168457  T
Q  739 aacaat 744  Q
    ||||||    
T  2168456 aacaat 2168451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 3330077 - 3330024
Alignment:
Q  331 tctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||||| || |||||||| |||||||| || ||||||||||||||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttccta 3330024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 8738181 - 8738120
Alignment:
Q  387 aatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||| ||| |||||||||||||||||||| |||   |||||||||| ||||||||||    
T  8738181 aatgtcatgtctcttaggttcatgaatgttgtgtatacaaagattgattttgtcatccaaaa 8738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 380
Target Start/End: Original strand, 45386019 - 45386136
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||| ||||| || || || ||||||||| |  |||||  ||||||  ||||||| |||||||||||||||||||||||  | |||||||||||||| |    
T  45386019 cttttgcggtaggacatgcaaccctaaaagctaagtcaaggaaagtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttac 45386118  T
Q  363 ttctggcacttttggctt 380  Q
     | ||  |||||||||||    
T  45386119 atttgaaacttttggctt 45386136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 48656866 - 48656979
Alignment:
Q  261 ggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    ||||||||| ||| || | ||| |||||||||||   |||| |||| ||  |||||||||||||| ||||| || |||||||  ||||||||||||||||    
T  48656866 ggcttttacagtatgacagacagccctaaaagtttcatcaagtaaaatggacaaacatgagaaagtgtgttatgtcaatcaaaatgtttttataccattt 48656965  T
Q  361 gcttctggcacttt 374  Q
    | || || ||||||    
T  48656966 gtttttgacacttt 48656979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 9601184 - 9601124
Alignment:
Q  388 atgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||||| ||||||||| | || |||||||||  ||||||||||| ||||||||||    
T  9601184 atgtcatgactcctaggttcataagtggtgtgtttacgaggattgattttgtcatccaaaa 9601124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 34107674 - 34107765
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgt--tctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||| ||| ||||||  ||||| |||||||||||||| |||||  || || ||||||| ||||||||||||||||| || || ||||||    
T  34107674 cctaaaaattgcgtcaaacgaagtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacacttt 34107765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 50483211 - 50483255
Alignment:
Q  320 agaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    ||||||||| |||||||||||||| || |||||||||||||||||    
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctt 50483255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 56461862 - 56461926
Alignment:
Q  86 tgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggagg 150  Q
    ||||||||||| |||||| |||||||||||||||||||| |   |||||| |||||| |||||||    
T  56461862 tgactttgttagggatgtactttttgatatattcaggcgtgcaggagtatcagtgaataaggagg 56461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 24720017 - 24719958
Alignment:
Q  329 gttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaacaa 388  Q
    ||||||||||||||| |||||||||| ||||||  | || |||||||| |||||||||||    
T  24720017 gttctgacaatcaacatgtttttatatcatttgtgtttgacacttttgtcttcctaacaa 24719958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 12053539 - 12053461
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    ||||||| || |||||| |||||   ||||||||||||| |||||||| ||||||||   ||||||||| |||||||||    
T  12053539 ctaaaagctgcgtcaaacaaagttgtcaaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgctt 12053461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 28882891 - 28882993
Alignment:
Q  75 aagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacc 174  Q
    |||||||| |||||||||||||  |||||| ||||| |||| || ||| ||| ||||| ||   |||||||||||||  || | ||||| ||||||||||    
T  28882891 aagtacatgcatgactttgttagagatgtcattttttatatttttaggtgggcgagagcatctatgaagaaggaggcgcctctaaacttcttgactgacc 28882990  T
Q  175 cac 177  Q
    |||    
T  28882991 cac 28882993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 43432488 - 43432431
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||||| ||| ||||||||| ||||||||||||||||||  ||||||||||| ||||    
T  43432488 ggaaaatgctaacaagtgtccttagagcattgtttaagcat-caaaagtagcaaatttt 43432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 6865828 - 6865889
Alignment:
Q  313 aaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||| |||||| ||||||||||| |||||| || ||||||| ||||||||| || ||||||    
T  6865828 aaacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacacttt 6865889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 39001377 - 39001312
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||  || ||| ||||| ||||||||||||||||||  |||||| |||| ||||||||||    
T  39001377 taacaatgttgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaa 39001312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 43849354 - 43849427
Alignment:
Q  311 ccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||| |||||||||||||| || || |||| || |||||||| |||||  | || ||||||||||||||||    
T  43849354 ccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttccta 43849427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 45661670 - 45661617
Alignment:
Q  384 aacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgatttt 437  Q
    ||||||||||| |||||||||| ||||||| ||||||||||  |||||| ||||    
T  45661670 aacaatgtcataactcgtaggtccatgaatattgtgtttacgaggattggtttt 45661617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 312 - 385
Target Start/End: Original strand, 45760841 - 45760914
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaa 385  Q
    |||| ||||||||||||||| ||||||||||| | |||||||| | ||||| | || || ||||| ||||||||    
T  45760841 caaagatgagaaagcgtgttttgacaatcaacatatttttatatcttttgcatttgacatttttgacttcctaa 45760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 52022231 - 52022166
Alignment:
Q  295 gtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    |||||||  |||||||||||| |||||| |  ||||||||||| || || ||||||||||||||||    
T  52022231 gtgtcaatcaaagtgaccaaaaatgagagaaagtgttctgacagtcgacatgtttttataccattt 52022166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 8e-36; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 17249202 - 17249384
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgaggg----cttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||| |||||||||||||||||||  |||||| |||| | ||||| ||  ||| |    ||||||||||| || | ||| |||||||||||| |||||    
T  17249202 ggaaaatatgcatgtgtggacttgactggggtttcaccatttgtgggtttcggagtgggcgcttttacggtaggacaaacaaccctaaaagttgcgtcaa 17249301  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    | |||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| || ||||||||||||||||    
T  17249302 acaaagtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttccta 17249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 357455 - 357569
Alignment:
Q  75 aagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacc 174  Q
    |||||||| |||| |||||||| |||||| |||||||||||||||||||||| | |||||| ||||||||||||||||  ||||||||| |||||||||     
T  357455 aagtacatgcatgcctttgttagggatgtactttttgatatattcaggcgggcgggagtatcagtgaagaaggaggcccttgtgaactttttgactgaca 357554  T
Q  175 cactagatagaagat 189  Q
    |||||||||||||||    
T  357555 cactagatagaagat 357569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 34304706 - 34304524
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||||||||||   |||||| |||||| ||||| ||| |||    ||||||||||||  || |   | ||||||||| || |||||    
T  34304706 ggaaaacatgcatgtgtggacttgattggggtttcaccacttgtgggtttaggagtcggggcttttacggttggacagctagccctaaaagctgcgtcaa 34304607  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||| | |||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||| |||||||||    
T  34304606 gcaaaataaccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttgggcttccta 34304524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 12401691 - 12401586
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    |||||||||||||   |||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||  ||||||||| ||||||||    
T  12401691 catgactttgttagaaatgtactttttgatatattcaggcgggcgagagtattagtgaagaaggaggcgcctgtgaacttcctgactgacctactagata 12401592  T
Q  184 gaagat 189  Q
    | ||||    
T  12401591 gcagat 12401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 45405 - 45521
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||| | |||| | || ||| ||| ||||||||||| ||| |||||||  |||||||    
T  45405 ttaagtacatacatgactttgttagggatgtactttttgatatattctgacgggcgggaatatcagttaagaaggaggcgtctttgaactttctgactga 45504  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  45505 cccactagatagaagat 45521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 4206332 - 4206448
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||| || ||| || ||| |||||||||||||||  | |||||||| |||| |||    
T  4206332 ttaagtacatacatgactttgttagggatgtactttttgatatattcagacgtgtgggaatatcagtgaagaaggaggcacccgtgaacttcttgattga 4206431  T
Q  173 cccactagatagaagat 189  Q
    ||||||||||| |||||    
T  4206432 cccactagataaaagat 4206448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 4206493 - 4206675
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||| ||||||||  |||||| |||||| ||||||||| |    ||  ||||||||||| || || || || ||||||| | |||||    
T  4206493 ggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggcatcagaccttttacggtaggacatgcagccttaaaagtggcgtcaa 4206592  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||| | ||||||||||||||||||||||||||| ||| || ||||||| ||||||||| || |||||| || ||||||    
T  4206593 gcaaagtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacactttcgggttccta 4206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 33220608 - 33220790
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||| | |||||  |||||| |||||| ||||| ||| | |    ||||||||||||| || | ||| | ||||||| ||  ||||    
T  33220608 ggaaaacatgcatgtgtgaatttgactggggtttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacagctctaaaagctgcatcaa 33220707  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      |||||| ||||||||||||||||||||  ||||||||||| || ||||||||||||||||| || |||||| |||||||||    
T  33220708 gcaaagtggccaaacatgagaaagcgtgtgttgacaatcaacatgcttttataccatttgcttttgacactttcggcttccta 33220790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 599 - 776
Target Start/End: Original strand, 33134163 - 33134340
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| |||||  |||| || ||||||||| ||| ||||||||  || ||||||||||   |||||||| || |||||| |||||| ||||||||    
T  33134163 aaaatgttaacaagtgcgctaaaagtattgtttaaacatctaaaagtataaa-tttttgcattagaaattgtacagttataacttcaacaaatgtttgac 33134261  T
Q  699 -ttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaa 776  Q
     |||| ||||  | ||||||| | |||| |||||||||||||||||| |||||||||||| |||||| ||||| |||||    
T  33134262 cttatatttttgaggcataatttttttttatgggttccttaaacaatgcctttaagacacttgttaacaagaccctaaa 33134340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 959800 - 959631
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| |||||||||||||||||||||||||     |||| ||||||  |||||||| | |    | ||||||||||| || | ||| ||||||||    
T  959800 atgggtaggaggaaaacatgcatgtgtggacttgattgaagtttcaccacttatgggattaggtgtcgggccttttacggtaggacaaacaaccctaaaa 959701  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||||||  |||||| | || ||||||||| |||||||||||||||||| ||| |||||||||||||    
T  959700 gttgtgtcaagcaaagtggctaaccatgagaaaacgtgttctgacaatcaacatgtctttataccatttg 959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 32116060 - 32115944
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||  | |||| | |||||| ||||||||| |||||   |||||||||  |||||||    
T  32116060 ttaagtacatacatgactttgttagggatgtactttttgatatattttgacgggcgggagtatcagtgaagaaagaggcgcatgtgaacttcctgactga 32115961  T
Q  173 cccactagatagaagat 189  Q
    || ||||||||||||||    
T  32115960 cctactagatagaagat 32115944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 34304868 - 34304751
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttg-atatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactg 171  Q
    |||||||||| ||||||||||||| |||||| ||||||  |||||||||||| ||   |||||| ||||||||||||| |   |||||||||  ||||||    
T  34304868 ttaagtacatgcatgactttgttagggatgtactttttttatatattcaggcaggcaggagtatcagtgaagaaggagacgcatgtgaactttctgactg 34304769  T
Q  172 acccactagatagaagat 189  Q
    ||||||||||||||||||    
T  34304768 acccactagatagaagat 34304751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 603 - 783
Target Start/End: Original strand, 6100643 - 6100822
Alignment:
Q  603 tgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttat 702  Q
    |||||| ||| | ||||||  |||||||||||||||||||||||||||| ||||||||||| |||| || ||| || |||  || ||||||||||| | |    
T  6100643 tgttaacaagagccctaaggacattgtttaagcatataaaagtagcaac-ttttgcattgaaaattatagggttatgactttaagaagtgtttgacatgt 6100741  T
Q  703 tttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaaaaataatt 783  Q
     |||||||  |||||| || |||  ||||||||||||||||| || ||| | ||| |||||| ||||| ||| || |||||    
T  6100742 attttcaagacataatttccttttgtgggttccttaaacaatgcccttagggcacttgttaacaagaccctataattaatt 6100822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 197 - 384
Target Start/End: Original strand, 29337970 - 29338158
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgagggcttttacggtaagatatacatccctaaaagttg 295  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||||||||||||     |  |  |||||||||||||| || | |||  | |||||| ||    
T  29337970 atgggtaggaggaaaacatgcatgtgtggacttgatcgaggttttaccactcgattagtggtcggggcttttacggtaggacaaacaatcataaaagatg 29338069  T
Q  296 tgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||  ||||   |||||||||||||| |||||||| ||||||||| || | ||||||||||||||| || ||||| || |||||||    
T  29338070 tgtcaagcaaagctgccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccatttgcttttgacacttctgacttccta 29338158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 286 - 384
Target Start/End: Original strand, 34554258 - 34554356
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||||| |||||  |||  ||||||||||||||||||||||||||| ||||||  |||||||||||||||| ||| || ||| || |||||||||    
T  34554258 ctaaaagttgcgtcaagcaaaacgaccaaacatgagaaagcgtgttctgataatcaagatgtttttataccatttacttttgacacattcggcttccta 34554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Original strand, 4165921 - 4166001
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| | ||||||||||||||||||||||||||||||| || ||||||| ||||||||| || |||||| || ||||||    
T  4165921 aaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttccta 4166001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 599 - 743
Target Start/End: Original strand, 32147844 - 32147987
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| |||||  ||||| ||||||||||||||||||||||||| || |||||||||||  ||||||||||| || |||  || || | |||||     
T  32147844 aaaatgttaagaagtgcactaagggcattgtttaagcatataaaagtagtaa-tttttgcattgcaaattgtacggttatgactttaataaatatttgat 32147942  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaa 743  Q
    || | |||||||| |||||| ||||||  ||| ||| ||||||||    
T  32147943 ttgtattttcaaaacataatttctttttgtggattctttaaacaa 32147987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 359
Target Start/End: Complemental strand, 12401551 - 12401384
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| |||||||   |||||| ||||||  ||||||||||    |||||||||| |||| || |  || | ||||||    
T  12401551 atgggtaggaggaaaacatgcatgtgtagacttgattggggtttcaccacttatgggattatggttcagggcttttatggtaggacaagcagcactaaaa 12401452  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||| |||||| |||||| |||||||| ||| |||||||| ||  ||||||| || || |||||||||    
T  12401451 gttgcgtcaaacaaagtggccaaacataagatagcgtgttttgctaatcaacatgcttatataccatt 12401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 363
Target Start/End: Complemental strand, 24016652 - 24016386
Alignment:
Q  85 atgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatag 184  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||| ||||||||  |||| ||||||| |  ||||||||||  |||||||| |||| |||      
T  24016652 atgactttgttaaggatgtcattttttatatattcaggtgggcgagagtatcggtgaggaaggagacgcctgtgaacttcctgactgacacacttgat-- 24016555  T
Q  185 aagattggatgaatgggtaggggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga----gggcttttacggtaagatata 280  Q
     |||| |||            |||||||||||||||||| | |||||| | ||||  ||||| ||||||||| ||    ||||||||  || |||| | |    
T  24016554 -agatagga------------ggaaaacatgcatgtgtgaatttgaccggagtttccccacttgtgggattaggagtcggggctttt-tgggaagacaga 24016469  T
Q  281 catccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgct 363  Q
    || || |||||||||  |||| |||| |   ||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  24016468 caaccgtaaaagttgcatcaagtaaaatagtcaaacatgagaaagcttgttctcacaatcaacatgtttttataccatttgct 24016386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 387
Target Start/End: Complemental strand, 34415656 - 34415461
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||| ||| |||| ||||||   |||||| ||||| ||| |||||| |    ||| ||||||||||| ||||  ||||| || ||    
T  34415656 atgggtaggaggaaaacatacatttgtgaacttgattggggtttcaccacacgttggattaggggtcaggacttttacggtaggataggcatccttacaa 34415557  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    | || |||||  ||| || | ||||||||||||| ||||||||||||||||| || |||||| ||||||| || || |||||| || |||||||||    
T  34415556 gctgcgtcaagcaaaatggcgaaacatgagaaagtgtgttctgacaatcaacatgcttttatgccatttgtttttgacactttaggtttcctaaca 34415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 354
Target Start/End: Original strand, 357616 - 357766
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgagg----gcttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    ||||||||||||||||||||||||  | |||| |||||| ||||| ||| | |     |||||||||||| || |  || ||||||||| |  |||||      
T  357616 aaaacatgcatgtgtggacttgactggagtttcaccacttgtgggtttaggggtcggtgcttttacggtaggacaggcagccctaaaagcttcgtcaagc 357715  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttata 354  Q
    |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  357716 aaagtggccaaacatgagaaagcgtgttctgacaatgaacatgcttttata 357766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 369
Target Start/End: Complemental strand, 34169020 - 34168911
Alignment:
Q  260 gggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||| ||| || || || |||||||| ||| |||||  |||||| |||||||||||||||| ||||  ||||| |||| || ||||||||||||    
T  34169020 gggcttttaccgtaggacatgcaaccctaaaatttgcgtcaagcaaagtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccatt 34168921  T
Q  360 tgcttctggc 369  Q
    ||||| ||||    
T  34168920 tgcttttggc 34168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 7200314 - 7200410
Alignment:
Q  78 tacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacc 174  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||| |  ||   ||||||| ||||||||||||||  |||||||||| ||| ||||||    
T  7200314 tacatgcataactttgttagggatgtcctttttgatatattcatgttggcatgagtatttgtgaagaaggaggcgcctgtgaacttcttgtctgacc 7200410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 374
Target Start/End: Original strand, 45676 - 45746
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||| ||||||||||||| |||||||||||||||||| || |||||| ||||||| || || ||||||    
T  45676 aaagtgatcaaacatgagaaaacgtgttctgacaatcaacatgcttttattccatttgtttttgacacttt 45746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 3715066 - 3714948
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    |||||||| ||||| |||||  | |||||||||||||||| ||| ||   |||||||||||| |||||||| ||||| ||| |||||||||| ||| ||     
T  3715066 cttttacgataagacatacaatcataaaagttgtgtcaaacaaaatggttaaacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgt 3714967  T
Q  363 ttctggcacttttggcttc 381  Q
    || || |||||||| ||||    
T  3714966 ttttgacacttttgacttc 3714948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 341
Target Start/End: Complemental strand, 28543585 - 28543446
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||||| |||||   ||||| |||||| |||||||||    | ||| |||||||||||||| |  || || ||||||| | |||||    
T  28543585 ggaaaacatgcatgtgtggatttgactgaggtttcaccacttgtgggattagaggtcaggacttttacggtaagacaggcagccttaaaagtcgcgtcaa 28543486  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatca 341  Q
      |||||| |||||||||||||| |||||| ||| |||||    
T  28543485 gcaaagtggccaaacatgagaaatcgtgttttgaaaatca 28543446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 29338209 - 29338271
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  ||||||||    
T  29338209 caatgtcatgactcctaggtccatgaatgttgtgtttacaaggattgatttttctatccaaaa 29338271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 3137377 - 3137439
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| ||| ||||| ||||||||||||||||||  |||||| ||||  |||||||||    
T  3137377 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaa 3137439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 32115698 - 32115644
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgatttt 437  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||   ||||||||||    
T  32115698 taacaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgatttt 32115644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 14538675 - 14538720
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatatt 118  Q
    |||||||||| ||| |||||||||  ||||||||||||||||||||    
T  14538675 ttaagtacatacataactttgttagagatgtcctttttgatatatt 14538720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 20693336 - 20693453
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatata-ttcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactg 171  Q
    |||||||||  ||||||||| ||| || |||| ||||||||||| || ||||| ||| ||||||  || ||||||||| |   ||||||||| |||| ||    
T  20693336 ttaagtacaaacatgactttattagggttgtcatttttgatatattttaggcgagtgggagtatcggtaaagaaggagactcttgtgaactttttgattg 20693435  T
Q  172 acccactagatagaagat 189  Q
    ||| |||||||| |||||    
T  20693436 accaactagataaaagat 20693453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 28009115 - 28009168
Alignment:
Q  384 aacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgatttt 437  Q
    |||||||||||||||| ||||| |||||| ||||| |||||| | |||||||||    
T  28009115 aacaatgtcatgactcctaggtccatgaacgttgtctttaccagaattgatttt 28009168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 3e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 37873593 - 37873717
Alignment:
Q  260 gggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||||||| || | ||| | |||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37873593 gggcttttacggtaggacagacagctctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatt 37873692  T
Q  360 tgcttctggcacttttggcttccta 384  Q
    ||||| || ||||||||||||||||    
T  37873693 tgcttttgacacttttggcttccta 37873717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 27336903 - 27336721
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| |||    || ||||||||||  || || | ||| |||||||||||| |||||    
T  27336903 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtgggggcttttacaataggacagacagccctaaaagttgcgtcaa 27336804  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||||||  ||||||||||||| |||||||||||||||||| |  ||||||||||||||||| || ||||| ||||||||||    
T  27336803 gcaaagtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccatttgcttttgacacttgtggcttccta 27336721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 206 - 383
Target Start/End: Complemental strand, 35310658 - 35310477
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||||||||||||||   |||||| |||||| ||||| ||| | |    ||||||||||||| || | ||| ||||||||| || |||||    
T  35310658 ggaaaacatgcatgtgtggacttgattggggtttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacaaccctaaaagatgcgtcaa 35310559  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
      |||||| |||||||||||||||| |||||||||||||||| || ||||||||||| ||||| || |||||| ||||||||    
T  35310558 gcaaagtggccaaacatgagaaagcatgttctgacaatcaacatgcttttataccatctgcttttgacactttcggcttcct 35310477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 35310819 - 35310703
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||| |||| | |||||||| |||||||||||||||  ||||||||||  | |||||    
T  35310819 ttaagtacagacatgactttgttagggatgtcctttttgatatattcgggcgagcgagagtatcagtgaagaaggaggcgcctgtgaacttcctaactga 35310720  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  35310719 cccactagatagaagat 35310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 599 - 744
Target Start/End: Complemental strand, 34339047 - 34338903
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| ||||| |||||| | ||||||||||||| ||||| ||||||||||| ||||||  || |||  ||| |||||| |||||||||||||||    
T  34339047 aaaatgttaacaagtgccctaagggtattgtttaagcatctaaaaatagcaactttt-gcattggaaagtgtgtggttataacttcaacaagtgtttgac 34338949  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||| ||||||| ||||||| |||||| |||||||| |||||||||    
T  34338948 ttatattttcaaggcataatttctttttatgggttctttaaacaat 34338903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 3113901 - 3114016
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||  ||| | |||||| |||||||||||||||| |||||||||||  |||||     
T  3113901 ttaagtacaaacatgactttgttagggatgtcctttttgatatattcagctgggcgggagtatcagtgaagaaggaggcccctgtgaacttgccgactg- 3113999  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  3114000 cccactagatagaagat 3114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 13166807 - 13166989
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatt-atg----agggcttttacggtaagatatacatccctaaaagttgtgtca 300  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||  || |||    ||||||||||||||  || | ||| ||||||||  || ||||    
T  13166807 ggaaaacatgcatgtgtggacttgact-gggtttcaccacttgtggattttatgggttagggcttttacggtgggacagacaaccctaaaatctgcgtca 13166905  T
Q  301 aataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |  |||||| | ||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||| |||||||||    
T  13166906 agcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggcttccta 13166989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 73 - 186
Target Start/End: Complemental strand, 38446537 - 38446424
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||| | |||||| |||||||||||||||   |||||| ||  |||||||    
T  38446537 ttaagtacatgcatgactttgttagggatgtactttttgatatattcaggcgggcgggagtatcagtgaagaaggaggcgcatgtgaattttctgactga 38446438  T
Q  173 cccactagatagaa 186  Q
    ||| ||||||||||    
T  38446437 ccctctagatagaa 38446424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 26212319 - 26212434
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||| ||||||| |||||| |||||||||||||||||  ||||| || ||| |||||||||||||||  ||||||||||  |||||||    
T  26212319 ttaagtacatacatgattttgttagggatgtactttttgatatattcaga-gggtgggaatatcagtgaagaaggaggcgcctgtgaacttcctgactga 26212417  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  26212418 cccactagatagaagat 26212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 260 - 383
Target Start/End: Original strand, 3114118 - 3114241
Alignment:
Q  260 gggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||||||| || |  || ||||||||||||  ||||| |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  3114118 gggcttttacggtaggacaggcagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 3114217  T
Q  360 tgcttctggcacttttggcttcct 383  Q
    || || || ||||||||| |||||    
T  3114218 tgtttttgacacttttggtttcct 3114241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 197 - 384
Target Start/End: Complemental strand, 35456176 - 35455984
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| || ||| |||||||||||||||||||| ||||||| |||||||| |||||| | |    | ||||||||||| | ||   | ||| ||||    
T  35456176 atgggtaggaggtaaatatgcatgtgtggacttgaccggggttttgccactcgtaggattaggggtccggccttttacggtagggtaggtagcccaaaaa 35456077  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||| || |||| ||  |||||||||||||||||||||| ||||||||| || ||||||||| ||||||| || || |||||||||||||    
T  35456076 gttgtgttaagtaaaatggtcaaacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaattttggcttccta 35455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 594 - 744
Target Start/End: Complemental strand, 15477034 - 15476885
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||   || |||  |||||||||    
T  15477034 taaggaaaatgttaacaagtgctctaagagcattgtttaagcatataaaagtagcaa-tttttttattgaaaattgtacgagtatgactttaacaagtgt 15476936  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||||||| |||||||  |||| |  | ||| ||| ||||||||||||||    
T  15476935 ttgacttatattttcaagacatatttcccttttatgcgttccttaaacaat 15476885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 84 - 189
Target Start/End: Original strand, 13166657 - 13166762
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    ||||||||||| | |||||| |||||||||||||||||||||| |  ||||| |||||||||||| ||  ||||||||||  ||||||||||||||||||    
T  13166657 catgactttgtaagggatgtactttttgatatattcaggcgggcggaagtatcagtgaagaaggaagcgcctgtgaactttctgactgacccactagata 13166756  T
Q  184 gaagat 189  Q
    ||||||    
T  13166757 gaagat 13166762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 25663011 - 25663111
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    ||||||||| ||  ||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||  |||||||    
T  25663011 ccctaaaagctgcatcaaacaaagtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacactttcagcttcct 25663110  T
Q  384 a 384  Q
    |    
T  25663111 a 25663111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 210 - 387
Target Start/End: Original strand, 43115359 - 43115539
Alignment:
Q  210 aacatgcatgtgtggacttgacccgggttttaccactcgtgggatta----tgagggcttttacggtaagatatacatccctaaaagttgtgtcaaataa 305  Q
    ||||||||||| |||| |||| | |||||| ||||||| ||||||||    |  |||||||||||||| |||| ||| |||||||||||| || ||||||    
T  43115359 aacatgcatgtatggatttgatcggggtttcaccactcatgggattagaggtcggggcttttacggtaggatagacagccctaaaagttgcgt-aaataa 43115457  T
Q  306 agtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    || |  |||| ||||||||||||||| ||||||||||| || ||| ||| ||||||||| || ||||| || |||| |||||    
T  43115458 agcggtcaaatatgagaaagcgtgttttgacaatcaacatgctttcatagcatttgcttttgacacttctgacttcgtaaca 43115539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 595 - 702
Target Start/End: Original strand, 10284952 - 10285058
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtt 694  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| ||||||||| ||| ||||| ||||  ||||||||||| |||||| |||||| | ||    
T  10284952 aaggaaaatgttaacaagtgccctgagagcattgtttaagcatctaaaagtagtaac-ttttgtattggaaattgtacggttataacttcaacaaatatt 10285050  T
Q  695 tgacttat 702  Q
    ||||||||    
T  10285051 tgacttat 10285058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 206 - 333
Target Start/End: Complemental strand, 433502 - 433371
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||| |||||||||||||||||||| |||||| |||||  ||||| ||| | |    ||||||||||||| |||| ||| || |||||| ||||||||    
T  433502 ggaaaatatgcatgtgtggacttgaccggggtttcaccacctgtgggtttaagggtaggggcttttacggtaggatagacaaccttaaaagctgtgtcaa 433403  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttct 333  Q
      |||||| |||||||||||||||||||||||    
T  433402 gcaaagtggccaaacatgagaaagcgtgttct 433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 14423786 - 14423716
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||    
T  14423786 aaagtgaccgaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 14423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 15291984 - 15292082
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||| ||||| || | ||| |||||||||| | |||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  15291984 cttttgcggtatgacagacaaccctaaaagtggcgtcaaacaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgtttttatacaatttg 15292082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 206 - 381
Target Start/End: Original strand, 33691952 - 33692131
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||   ||||| |||||| ||||| ||| | |    ||||||||||||| || |  ||  |||||||| || |||||    
T  33691952 ggaaaacatgcatgtgtggacttgactgaggtttcaccacttgtgggtttaggggtcggggcttttacggtaggacaggcaggcctaaaagctgcgtcaa 33692051  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttc 381  Q
      |||||| |||||||||| ||| |||||| ||||||||||| || |||| |||||||||||| || |||||| ||||||    
T  33692052 gcaaagtggccaaacatgacaaaacgtgttatgacaatcaacatgcttttgtaccatttgcttttgacactttcggcttc 33692131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 27337064 - 27336948
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| | ||||||||||| |||  | |||||||||||||||||||| |   |||||| ||||||||| || ||  ||||||||||  |||||||    
T  27337064 ttaagtacatacttgactttgttagggacatactttttgatatattcaggcgagcaggagtatcagtgaagaaagaagctcctgtgaactttctgactga 27336965  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  27336964 cccactagatagaagat 27336948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 38875752 - 38875666
Alignment:
Q  298 tcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| || || ||||||  ||||||||    
T  38875752 tcaaacaaagcgaccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacactttcagcttccta 38875666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 285 - 387
Target Start/End: Complemental strand, 43129661 - 43129559
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||| || |||||  ||||||  ||||||||||||| |||||||||||||||||| ||||||| |||||||||||| || || ||| || ||||||    
T  43129661 cctaaaagatgcgtcaagcaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttgcttttgacattttcggtttccta 43129562  T
Q  385 aca 387  Q
    |||    
T  43129561 aca 43129559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 26212564 - 26212639
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||||| |||||  |||||| |||||||||||||||||| ||||||| |||||| || ||||||||||||||    
T  26212564 ctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttg 26212639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 364
Target Start/End: Original strand, 32269684 - 32269856
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| ||||||  ||| |||| | |    | |||||| |||| || || || ||||||||    
T  32269684 atgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttctggaattaggtgtcgggccttttatggtaggacatgcaaccctaaaa 32269783  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    | ||  ||||  ||||||  |||||||||||||| |||||||||||||||||  | |||||||||||||||||    
T  32269784 gctgcatcaaccaaagtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgctt 32269856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 433663 - 433547
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| || |||||||||||||| |||| | || |||  |||||||| |||||  | ||||||||  ||||||     
T  433663 ttaagtacaggcatgactttgttagggatgtactatttgatatattcagacgggcgggaatatcggtgaagaaagaggcgcccgtgaactttctgactgg 433564  T
Q  173 cccactagatagaagat 189  Q
    ||||||| |||||||||    
T  433563 cccactaaatagaagat 433547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 34335487 - 34335375
Alignment:
Q  262 gcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    |||||||| ||| |||| ||| |||||||||   ||||||  |||  | |||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  34335487 gcttttactgtaggatagacaaccctaaaagccatgtcaagcaaaagggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttg 34335388  T
Q  362 cttctggcacttt 374  Q
     || || ||||||    
T  34335387 tttttgacacttt 34335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 42921797 - 42921725
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| |||||| |||||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  42921797 caaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttccta 42921725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 8859016 - 8858969
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  8859016 caaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 32230489 - 32230560
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccat 358  Q
    ||||||||| |||||  |||||||||||||||||||||  |||||||||||||||||  | |||||||||||    
T  32230489 taaaagttgcgtcaagcaaagtgaccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccat 32230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 597 - 763
Target Start/End: Original strand, 32292188 - 32292356
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtag---caactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    |||||||| |||||| |||  ||||  ||||||||||| || |||||||||   |||||||| | | ||| ||||||| | | ||||||  ||||| |||    
T  32292188 ggaaaatggtaataaatgttttaaggacattgtttaagtatttaaaagtagtagcaactttt-gtaatgaaaattgtaggtttataactttaacaaatgt 32292286  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgtta 763  Q
    ||||||||| |||||||| | |||| | |||| || |||||||||||||||||| ||| ||||| |||||    
T  32292287 ttgacttatattttcaaaacgtaatttatttttataggttccttaaacaatacccttaggacacttgtta 32292356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 744
Target Start/End: Complemental strand, 14663056 - 14662978
Alignment:
Q  666 attgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||| |||| |||||| ||||||||||||||||||| |||| || ||||||| | |||| ||| ||||||||||||||    
T  14663056 attgtgcggttataacttcaacaagtgtttgacttatatttttaatgcataatttttttttatgagttccttaaacaat 14662978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 15291759 - 15291878
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtat---tagtgaagaaggaggcctctgtgaacttgttgac 169  Q
    |||||||||  ||||||||||||| ||| || |||||||||||||||||  ||| | ||||||    |||||||||||| ||  ||||||||||    ||    
T  15291759 ttaagtacaaacatgactttgttagggacgtactttttgatatattcagatgggcgggagtatcagcagtgaagaaggaagcgcctgtgaacttcccaac 15291858  T
Q  170 tgacccactagatagaagat 189  Q
    ||||||||||||||||||||    
T  15291859 tgacccactagatagaagat 15291878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 598 - 652
Target Start/End: Original strand, 1088186 - 1088239
Alignment:
Q  598 gaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaact 652  Q
    ||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  1088186 gaaaatgctaataagtgtccaaag-gcattgtttaagcatctaaaagtagcaact 1088239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 430686 - 430633
Alignment:
Q  328 tgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttc 381  Q
    |||||||||||||||| || ||||||||||||||||| || |||||||| ||||    
T  430686 tgttctgacaatcaacatgcttttataccatttgcttttgacacttttgtcttc 430633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 9841084 - 9841133
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcagg 122  Q
    |||||||||| |||||||||||||   |||||||||||||||||||||||    
T  9841084 ttaagtacatacatgactttgttagacatgtcctttttgatatattcagg 9841133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 32269535 - 32269649
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    ||||||||| |||||||||||||| ||||||  ||||| |||||||||| || | | |||||  |||||||||| ||||   |||||  ||  | |||||    
T  32269535 ttaagtacaatcatgactttgttagggatgtaattttttatatattcagacgagcgggagtagcagtgaagaagaaggcgcatgtga--ttcctaactga 32269632  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  32269633 cccactagatagaagat 32269649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 20921035 - 20920978
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||||||||| ||||| ||| |||||||||||||||||| || ||||||||| ||||    
T  20921035 ggaaaatgttaacaagtgcccttagagcattgtttaagcat-tagaagtagcaaatttt 20920978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 23023572 - 23023510
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| ||| |||||  |||||||||||||||||   |||||||||| ||||||||||    
T  23023572 caatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaa 23023510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 386 - 436
Target Start/End: Original strand, 32269927 - 32269977
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattt 436  Q
    |||||||||| ||| ||||| ||||||||||||||||||  ||||||||||    
T  32269927 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgattt 32269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 38446374 - 38446287
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga----gggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||||||||||||||||||   ||||| |||||| ||||| ||| ||    |||||||||||||| || || |||||||||||    
T  38446374 aaaacatgcatgtgtggacttgactgaggtttcaccacttgtgggtttaggagttggggcttttacggtatgacatgcatccctaaaa 38446287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 22188782 - 22188847
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||| ||||| ||| ||| ||||||||||||||||||||  | |||| |||| ||||||||||    
T  22188782 taacaatatcatgtctcctagattcatgaatgttgtgtttacgagaattggttttgtcatccaaaa 22188847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 655
Target Start/End: Original strand, 26362234 - 26362279
Alignment:
Q  610 aagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    ||||||| ||||| |||| |||||||||||||||||||||| ||||    
T  26362234 aagtgtcataagaacattctttaagcatataaaagtagcaattttt 26362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 20091 - 19976
Alignment:
Q  74 taagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgac 173  Q
    ||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| ||||||| || ||||||    
T  20091 taagtacatacttgactttgttaggaatgtcctttttgatatattcaggagggtgaaagtatcagtgaagaaggaggcctctctgaacttcttaactgac 19992  T
Q  174 ccactagatagaagat 189  Q
    ||||||||||||||||    
T  19991 ccactagatagaagat 19976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 10492 - 10388
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaa----cgtgtttttataccatttgcttctggcacttttggct 379  Q
    |||||||||||| ||||| |||| || |||||||||| || ||||||||||||||||||    | || ||||||||||||||||| || ||||| |||||    
T  10492 ccctaaaagttgcgtcaagtaaaatggccaaacatgataatgcgtgttctgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggct 10393  T
Q  380 tccta 384  Q
    |||||    
T  10392 tccta 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 34644776 - 34644594
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||| ||| | |    ||||||||||||| || |  || |||||||||||| |||||    
T  34644776 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcggggcttttacggtaggacaagcaaccctaaaagttgcgtcaa 34644677  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    | |||||| |||||||||||||||||||||||||||| | || || |||||||||||||| || || |||||| |||||||||    
T  34644676 acaaagtggccaaacatgagaaagcgtgttctgacaacctacatgcttttataccatttgtttttgacactttcggcttccta 34644594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 581 - 744
Target Start/End: Complemental strand, 36564010 - 36563851
Alignment:
Q  581 ataacaataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataa 680  Q
    |||| ||||| |||||||||| |||||| |||||  | ||| ||||||||||||||| |||||||||||||||||  |||||| ||||||||||  ||||    
T  36564010 ataataataataataaggaaa-tgttaacaagtgctccaagggcattgtttaagcatttaaaagtagcaactttta-cattgaaaattgtacggatataa 36563913  T
Q  681 ctccaacaagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||  |||||||||||||||||| ||||||| ||||||| ||||||  || ||||||||||||||    
T  36563912 ctttaacaagtgtttgacttatattttcaaggcataatttctttt--tgagttccttaaacaat 36563851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 28040863 - 28040979
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| | |||||||||||| || || | |||| ||| ||||||||||||||| |||||||||||  ||||| |    
T  28040863 ttaagtacatacatgactttgttagggatgtaccttttgatatatttagacgtgcgagaatatcagtgaagaaggaggcgtctgtgaacttcctgactaa 28040962  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  28040963 cccactagatagaagat 28040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 25375730 - 25375912
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||| | ||||| |||||| |||||| || |||||| |||||| |    || |||||||||||| || | ||| | | |||||||| |||||    
T  25375730 ggaaaacatgcaagcgtggatttgaccagggtttcactactcgtcggattaggggtcagagcttttacggtaggacagacaactccaaaagttgcgtcaa 25375829  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||||||||||||||||| ||| | |||||| || |||||| |||||||||||||||||||  || ||||||||||||||||    
T  25375830 gcaaagtgaccaaacatgacaaaacatgttcttaccatcaacatgtttttataccatttgctattgacacttttggcttccta 25375912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 206 - 384
Target Start/End: Original strand, 29169691 - 29169872
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||| ||||||||  |||||| ||||||  |||||||| | |    | ||||||| ||| || | ||| |||| |||||||||||||    
T  29169691 ggaaaacatgcatgtgtagacttgactggggtttcaccactt-tgggattaggtgtcgggccttttaccgtaggacagacagcccttaaagttgtgtcaa 29169789  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
     ||| ||| ||||||| |||||| |||||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  29169790 gtaaggtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttccta 29169872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 34644937 - 34644821
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||| ||| |||||| |||||||||||||||||| ||| | |||||| |||||||||||| ||   |||||||||  |||||||    
T  34644937 ttaagtacaggcatgactttattagggatgtactttttgatatattcaggagggcgggagtatcagtgaagaaggaagcgcgtgtgaactttctgactga 34644838  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  34644837 cccactagatagaagat 34644821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 744
Target Start/End: Original strand, 42410166 - 42410315
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    |||| |||||||||| |||||||||||  ||||||||||| ||| ||||||||||||| ||||||||||  |||| || |||| | ||   |||||||||    
T  42410166 taagaaaaatgttaacaagtgtcctaaaggcattgtttaatcatctaaaagtagcaac-ttttgcattggaaattatatggtattgaccttaacaagtgt 42410264  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||||| | |||||||  |||||| ||||||  |||||||||||||||||    
T  42410265 ttgacttgtattttcaagacataatttctttttgtgggttccttaaacaat 42410315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 197 - 374
Target Start/End: Original strand, 45659534 - 45659717
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatga----gggcttttacggtaagatatacatccct-aaa 290  Q
    ||||||||| |||||||||||||| || ||||||||  |||||| |||||| ||||||||| |     || ||||||| ||| || || || |||| |||    
T  45659534 atgggtaggaggaaaacatgcatgcgtagacttgactggggtttcaccacttgtgggattaggtatcgggccttttaccgtaggacatgcagcccttaaa 45659633  T
Q  291 agttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    || || ||||| ||| ||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||| || ||||||    
T  45659634 agctgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 45659717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 19035818 - 19035702
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||| ||||||| |||||| |||||||||||| |||| ||||||||| ||| ||||||||||||||   ||||||||||  |||| ||    
T  19035818 ttaagtacagacatgaatttgttagggatgtactttttgatatactcagacgggtgagaatataagtgaagaaggaggtgcctgtgaacttcctgaccga 19035719  T
Q  173 cccactagatagaagat 189  Q
    ||||||||||| |||||    
T  19035718 cccactagataaaagat 19035702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 297 - 373
Target Start/End: Complemental strand, 21473118 - 21473042
Alignment:
Q  297 gtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcactt 373  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||    
T  21473118 gtcaagtaaaatggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactt 21473042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 297 - 384
Target Start/End: Original strand, 28041119 - 28041206
Alignment:
Q  297 gtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||| || |||||| || ||||||    
T  28041119 gtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgacactttcggtttccta 28041206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 599 - 744
Target Start/End: Complemental strand, 894921 - 894777
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgac 698  Q
    |||||||||| ||||| |||||  ||||||||||||||| ||||||||||||| |||||  |||| ||||||||| | || |||  ||||||||||||||    
T  894921 aaaatgttaacaagtgccctaacggcattgtttaagcatctaaaagtagcaac-ttttgtgttgaaaattgtacgattatgactttaacaagtgtttgac 894823  T
Q  699 ttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    || |  ||||||  |||||| || |||  |||||||||||||||||    
T  894822 ttgtactttcaagacataatttccttttgtgggttccttaaacaat 894777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 19035575 - 19035486
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcactt 373  Q
    ||||||||| || |||||  |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||| || |||||    
T  19035575 ccctaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacactt 19035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 625 - 757
Target Start/End: Original strand, 13984245 - 13984376
Alignment:
Q  625 attgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataatatcttt 724  Q
    ||||||||| ||| |||||||||||||||||  |||||  ||| ||||||| |||||| ||| || |||||||||||| |||| |||||||||| |||||    
T  13984245 attgtttaaacatctaaaagtagcaactttta-cattggaaatcgtacggttataacttcaataaatgtttgacttatatttttaaagcataatttcttt 13984343  T
Q  725 tcatgggttccttaaacaatacctttaagacac 757  Q
    | | || || ||||||||||| ||||| |||||    
T  13984344 ttacggattacttaaacaatatctttatgacac 13984376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 22347022 - 22346923
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||||| ||||||  |||||| ||||| ||||||||||||||||||||||||||| ||  |||||||| ||||||| || |||||| || ||||||    
T  22347022 cctaaaagttatgtcaagcaaagtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttccta 22346923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 208 - 360
Target Start/End: Original strand, 50161316 - 50161472
Alignment:
Q  208 aaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    ||||||||||||||||||||| |||    ||| ||||||||||| |||| | |    | ||||||||||| || | ||| |||||||||||| |||||      
T  50161316 aaaacatgcatgtgtggacttaaccgatatttcaccactcgtggaattaggggctgagacttttacggtaggacagacaaccctaaaagttgcgtcaagc 50161415  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    ||||||  |||||||||||||||||||||| ||||||||| || ||||||| |||||    
T  50161416 aaagtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcattt 50161472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 594 - 710
Target Start/End: Complemental strand, 10040548 - 10040435
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    |||||| |||||||| ||||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||  |||||| |||| |||||| |||||| |||    
T  10040548 taaggataatgttaacaagtgccctaagggcattgtttaagcatctaaaagtagtaac-ttttgcattggaaattgtccggttataacttcaacaaatgt 10040450  T
Q  694 ttgacttattttttcaa 710  Q
    |  |||||| |||||||    
T  10040449 t--acttatattttcaa 10040435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 88 - 189
Target Start/End: Complemental strand, 22347233 - 22347132
Alignment:
Q  88 actttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaag 187  Q
    ||||||||| |||||| |||||||| || |||||  ||| | || ||| |||||||||||||||  ||||||||||  ||||||||||||||||||||||    
T  22347233 actttgttagggatgtactttttgacattttcagatgggcgggaatatcagtgaagaaggaggcacctgtgaactttctgactgacccactagatagaag 22347134  T
Q  188 at 189  Q
    ||    
T  22347133 at 22347132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 206 - 352
Target Start/End: Original strand, 37932115 - 37932264
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    |||||||||||||| ||||||||||    ||||| |||||| ||||||||| | |    ||||||||| |||||| | ||| ||||||||||||||||||    
T  37932115 ggaaaacatgcatgcgtggacttgattgaggtttcaccacttgtgggattaggggccaaggcttttacagtaagacagacagccctaaaagttgtgtcaa 37932214  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgttttta 352  Q
      ||| ||  |||| | ||||||| ||||||||||||||||||||||||||    
T  37932215 gcaaaatggtcaaatacgagaaag-gtgttctgacaatcaacgtgttttta 37932264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 29169530 - 29169646
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  || |||||||| | ||||||  |||||||||||||||| ||||   |||||| |||||||||||||||  ||||||||||  |||||||    
T  29169530 ttaagtacagacacgactttgtaagggatgtattttttgatatattcagacgggcatgagtatcagtgaagaaggaggcgcctgtgaacttcctgactga 29169629  T
Q  173 cccactagatagaagat 189  Q
    ||| ||||| |||||||    
T  29169630 cccgctagaaagaagat 29169646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 2764606 - 2764507
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||||||||||||| | ||||||  ||||||||||||| ||||||| |||||||||| || |||||| |||||| ||| || ||||||  ||||||||    
T  2764606 cctaaaagttgtgtcagacaaagtggtcaaacatgagaaaacgtgttccgacaatcaacatgcttttatgccattttcttttgacactttcagcttccta 2764507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 31737281 - 31737392
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    |||||||||||||||| ||  |||||||||  | |||||  |||||| |||||||||||||| | | |||||||||||||| || ||||||||||||||     
T  31737281 cttttacggtaagataaacggccctaaaagcggcgtcaagcaaagtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgt 31737380  T
Q  363 ttctggcacttt 374  Q
    || || ||||||    
T  31737381 ttttgacacttt 31737392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 38731942 - 38731835
Alignment:
Q  85 atgactttgttacggatgtcctttttg---atatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactaga 181  Q
    |||||||||||| ||||||| |||||    ||||||| |||| |||| |||||| |||||||||||||| | || |||||||  | ||||||||||||||    
T  38731942 atgactttgttagggatgtcatttttttttatatatttaggcaggtgggagtatcagtgaagaaggaggtccctatgaacttccttactgacccactaga 38731843  T
Q  182 tagaagat 189  Q
    ||||||||    
T  38731842 tagaagat 38731835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 598 - 742
Target Start/End: Original strand, 38067686 - 38067829
Alignment:
Q  598 gaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttga 697  Q
    ||||||||||| |||||  |||| | |||||||||||||| ||||||||  ||| ||||| ||||| ||||||||| | || |||  ||||| |||||||    
T  38067686 gaaaatgttaacaagtgctctaataacattgtttaagcatctaaaagtattaac-ttttgtattgaaaattgtacgatgatgactttaacaaatgtttga 38067784  T
Q  698 cttattttttcaaagcataatatcttttcatgggttccttaaaca 742  Q
    ||| | ||||||| ||||||| ||||||  ||| || ||||||||    
T  38067785 cttgtattttcaaggcataatttctttttgtggatttcttaaaca 38067829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 317 - 360
Target Start/End: Original strand, 20259809 - 20259852
Alignment:
Q  317 atgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  20259809 atgagaaagcgtgttctgacaatcaacatgtttttataccattt 20259852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 723
Target Start/End: Complemental strand, 37297114 - 37296989
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||||| |||  | |||| |||| ||| ||||||||||||| ||||||||||| ||||||| | | | || | |||||||||||||    
T  37297114 ggaaaatgttaacaagtgtcataatggtattgcttaaccatctaaaagtagcaac-ttttgcattgaaaattgtaggattacaatttcaacaagtgtttg 37297016  T
Q  697 acttattttttcaaagcataatatctt 723  Q
    | |||| ||||||| | ||||| ||||    
T  37297015 atttatattttcaaggtataatttctt 37296989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 594 - 763
Target Start/End: Original strand, 3831352 - 3831519
Alignment:
Q  594 taaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgt 693  Q
    |||| |||||| ||| ||||| ||||||  |||||||||||||| ||||||||| || |||||||||||  |||||||| || || |||  |||| ||||    
T  3831352 taagaaaaatgctaacaagtgccctaaggccattgtttaagcatctaaaagtag-aaatttttgcattggaaattgtacagttatgactttaacatgtgt 3831450  T
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgtta 763  Q
    |  | || | |||||||  |||||| | |||| |||||||| ||||||||| || ||||||||| |||||    
T  3831451 tgaatttgtattttcaagacataat-tttttttatgggttctttaaacaatgcccttaagacacttgtta 3831519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 4861971 - 4862071
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaac 386  Q
    ||||||||| ||||| |||| ||  ||||||||||||||||| ||||||||| |||| |  |||||||| |||||||| || |||||| |  ||||||||    
T  4861971 taaaagttgcgtcaagtaaaatggtcaaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacactttcgatttcctaac 4862070  T
Q  387 a 387  Q
    |    
T  4862071 a 4862071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 16500186 - 16500062
Alignment:
Q  260 gggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||||||||||||| || | |||  ||||||||||| ||||  ||||||| ||||| || ||||| | |||||| ||||| ||| ||  ||||||| |||    
T  16500186 gggcttttacggtaggacagacaatcctaaaagttgcgtcacgtaaagtggccaaatataagaaaacatgttctaacaattaacatgcctttatactatt 16500087  T
Q  360 tgcttctggcacttttggcttccta 384  Q
    ||||| || |||||||| |||||||    
T  16500086 tgcttttgacacttttgacttccta 16500062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 38731704 - 38731640
Alignment:
Q  317 atgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttc 381  Q
    ||||||||||||||||||||||||||| |  |||||||| |||||||| ||  ||||||||||||    
T  38731704 atgagaaagcgtgttctgacaatcaacatacttttatacaatttgcttttgaaacttttggcttc 38731640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 42919987 - 42919896
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
    ||||||||||||  ||||| |||| | |||||||||||||| |||||||| ||||||||| |||||||||  ||| ||||| || ||||||||    
T  42919987 ccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttg 42919896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 655
Target Start/End: Complemental strand, 51049962 - 51049906
Alignment:
Q  599 aaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||| ||| |||||  ||||| |||||||||||||||||||||||||||||||||    
T  51049962 aaaatgctaacaagtgctctaagggcattgtttaagcatataaaagtagcaactttt 51049906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 592 - 655
Target Start/End: Complemental strand, 13208152 - 13208089
Alignment:
Q  592 aataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||| |||||| ||| ||||||||||||  |||||||||||||| |||||||| ||||||||    
T  13208152 aataagaaaaatgctaacaagtgtcctaaggacattgtttaagcatctaaaagtaacaactttt 13208089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 7794652 - 7794770
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||  |||| || ||||||||||||||||| ||||||||||| | |||||| | |||||| ||||||   || | ||||  ||||| |    
T  7794652 ttaagtacaaacatggttttgctagggatgtcctttttgataaattcaggcgggcgggagtatcattgaagagggaggcgcatgcgcacttcctgactaa 7794751  T
Q  173 cccactagatagaagattg 191  Q
    ||||||||||| |||||||    
T  7794752 cccactagatataagattg 7794770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 36487035 - 36486921
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    |||||| ||||| ||| |||||  ||||| |||  |||| |||||||  |||| ||||||||||||||| ||||||||||  | ||||||||  ||||||    
T  36487035 cttttatggtaaaatagacatctttaaaaattgcatcaagtaaagtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgc 36486936  T
Q  363 ttctggcacttttgg 377  Q
    || || |||||||||    
T  36486935 ttttgacacttttgg 36486921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 37931969 - 37932067
Alignment:
Q  88 actttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaa 186  Q
    ||||||||| |||| ||||||||||| |||| ||||||| | |||||| ||||||||||||| |   | |||||||  |||| |||||| |||||||||    
T  37931969 actttgttagggatatcctttttgatgtatttaggcgggcgggagtataagtgaagaaggagacgcttttgaactttctgaccgacccattagatagaa 37932067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 630 - 744
Target Start/End: Original strand, 14104303 - 14104416
Alignment:
Q  630 ttaagcatataaaagtagcaactttttgcattgagaattgtacggt--aataactccaacaagtgtttgacttattttttcaaagcataatatcttttca 727  Q
    |||||||| ||||||||||||| ||||||||||| ||||| |||||   |||||| |||||||| |||||||||  ||||||| ||||||| |||||| |    
T  14104303 ttaagcatctaaaagtagcaac-ttttgcattgaaaattgcacggttatataacttcaacaagtatttgactta-attttcaaggcataat-tcttttta 14104399  T
Q  728 tgggttccttaaacaat 744  Q
    | | |||||| ||||||    
T  14104400 tagattccttcaacaat 14104416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 287 - 383
Target Start/End: Complemental strand, 37200107 - 37200012
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    ||||||||  ||||| |||||||  ||||||| ||||||| ||| || ||||||||  ||||||||||||||||| || |  |||||||||||||||    
T  37200107 taaaagttacgtcaagtaaagtggtcaaacataagaaagcatgtgctaacaatcaatatgtttttataccatttg-tttttacacttttggcttcct 37200012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 20259685 - 20259744
Alignment:
Q  197 atgggtaggggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggatta 256  Q
    |||||||||| ||||||||||||||| ||| ||||  |||||||||| || |||||||||    
T  20259685 atgggtagggaaaaacatgcatgtgtagacatgactagggttttaccgcttgtgggatta 20259744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 448
Target Start/End: Complemental strand, 30688535 - 30688472
Alignment:
Q  385 acaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||||||||| | ||| ||||||||||||||||||  |||||| |||| | ||||||||    
T  30688535 acaatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaa 30688472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 15584982 - 15584924
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||||| |||||||  |||| ||| |||||||||||||| ||||| ||||||||||||    
T  15584982 aaagtgatcaaacattggaaaacgtattctgacaatcaacatgtttctataccatttgc 15584924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 655
Target Start/End: Original strand, 3527653 - 3527718
Alignment:
Q  590 aaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    ||||| ||||||||| ||| || | |||| | ||||||||||||| |||||||||||| |||||||    
T  3527653 aaaattaggaaaatggtaacaaatatccttaaagcattgtttaagtatataaaagtagtaactttt 3527718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 655
Target Start/End: Original strand, 36384854 - 36384891
Alignment:
Q  618 taagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  36384854 taagagtattgtttaagcatataaaagtaacaactttt 36384891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 1e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 598 - 744
Target Start/End: Complemental strand, 8108354 - 8108210
Alignment:
Q  598 gaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttga 697  Q
    ||||||||||| |||||||||||  ||||||||||||||| |||||||| |||| ||||||||||  ||||||||||| |||||| ||||||||| ||||    
T  8108354 gaaaatgttaacaagtgtcctaaatgcattgtttaagcatctaaaagtaacaac-ttttgcattggaaattgtacggttataacttcaacaagtg-ttga 8108257  T
Q  698 cttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    ||||| ||||||| ||||||| ||||||  || ||||||||||||||    
T  8108256 cttatattttcaaggcataatttctttttttgtgttccttaaacaat 8108210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 597 - 775
Target Start/End: Original strand, 45249333 - 45249510
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||| || |||  ||||| ||||||    
T  45249333 ggaaaatgttaacaagtgccttaagggcattgtttaagcatataaaagtagcaac-ttttgcattggaaattgtacggttatgactttaacaaatgtttg 45249431  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagacactaa 775  Q
    |||| | |||||||  |||||| ||||||  ||||||||||||||||| || ||| | ||| |||||| ||||| ||||    
T  45249432 acttgtattttcaagacataatttctttttgtgggttccttaaacaatgcccttagggcacttgttaacaagaccctaa 45249510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 26772910 - 26772786
Alignment:
Q  260 gggcttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatt 359  Q
    |||| ||||| ||| || || |||||||||||||||||||||  |||||| |||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  26772910 gggcatttacagtaggacatgcatccctaaaagttgtgtcaagcaaagtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccatt 26772811  T
Q  360 tgcttctggcacttttggcttccta 384  Q
    ||||| || ||||||||||||||||    
T  26772810 tgcttttgacacttttggcttccta 26772786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 586 - 753
Target Start/End: Original strand, 53466191 - 53466357
Alignment:
Q  586 aataaaaataaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactcca 685  Q
    ||||| || |||||||| ||||| ||||||| |||   ||||||||||| || |||||| | |||||||| ||||||| ||||||||| | |||||| ||    
T  53466191 aataagaaaaaggaaaaggttaacaagtgtcttaaagacattgtttaagtatctaaaagaaacaactttt-gcattgaaaattgtacgattataacttca 53466289  T
Q  686 acaagtgtttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaag 753  Q
    | ||||||||||||||| |||| |||||||||| |||||| || ||||||||||||||| || |||||    
T  53466290 ataagtgtttgacttatatttttaaagcataatttctttttataggttccttaaacaatgccattaag 53466357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 197 - 361
Target Start/End: Complemental strand, 13582729 - 13582560
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatg----agggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||| | |||| ||||||||| |    ||| ||||||| ||| || |  || ||||||||    
T  13582729 atgggtaggaggaaaacatgcatgtgtagacttgaccgaggtttcaacacttgtgggattaggtgtcaggccttttaccgtaggacaagcagccctaaaa 13582630  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    | || |||||  ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  13582629 gctgcgtcaatcaaagtgatcaaacataagaaagtgtgttctgacaatcaacgtgtttttataccatttg 13582560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 29862168 - 29862052
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| |||||| ||||||||||||||||||| || | |||||||||||||||| |||||   ||||||||| ||| |||     
T  29862168 ttaagtacaggcatgactttgttagggatgtactttttgatatattcaggcaggcgggagtattagtgaagaaagaggcacatgtgaacttcttgtctgg 29862069  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  29862068 cccactagatagaagat 29862052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 73 - 189
Target Start/End: Original strand, 52741247 - 52741363
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  ||||||||||||| ||||||  |||||||||||||||| |||| | || ||| ||||||||||||||| | |||||||||  |||||||    
T  52741247 ttaagtacagacatgactttgttagggatgtaatttttgatatattcagacgggcgggaatatcagtgaagaaggaggcgtatgtgaacttcctgactga 52741346  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  52741347 cccactagatagaagat 52741363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 52741495 - 52741591
Alignment:
Q  288 aaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||| || |||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||| ||||||    
T  52741495 aaaagctgagtcaaacaaattgaccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggtttccta 52741591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 197 - 384
Target Start/End: Complemental strand, 53785929 - 53785737
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| |||||| ||||||||| | |    | ||||||| ||| ||||  || |||| |||    
T  53785929 atgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccactagtgggattaggtgtcgggccttttaccgtaggataggcagcccttaaa 53785830  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |  | ||||| ||| ||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  53785829 gccgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttccta 53785737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 595 - 743
Target Start/End: Complemental strand, 23919288 - 23919141
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtt 694  Q
    |||||||||||||| ||||||  |||| ||||||||||||| | |||||||| |||||||| | ||||  ||||||||  | |||||| |||||||||||    
T  23919288 aaggaaaatgttaacaagtgttataagggcattgtttaagcctctaaaagtaacaactttt-gtattggaaattgtacaattataacttcaacaagtgtt 23919190  T
Q  695 tgacttattttttcaaagcataatatcttttcatgggttccttaaacaa 743  Q
    |||| ||| ||||| |  |||||| |||||| |||||||||||||||||    
T  23919189 tgacatatattttcgagacataatttctttttatgggttccttaaacaa 23919141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 197 - 361
Target Start/End: Original strand, 39583116 - 39583285
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaa 291  Q
    ||||||||| |||||||||||||| |||||||||||   |||||||||||| ||||||||| | |    | | |||| |||| ||||  || ||||||||    
T  39583116 atgggtaggaggaaaacatgcatgcgtggacttgacttaggttttaccacttgtgggattaagggtcgggccatttatggtaggataggcagccctaaaa 39583215  T
Q  292 gttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    | || |||||  |||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  39583216 gctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttg 39583285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 52411649 - 52411756
Alignment:
Q  84 catgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagata 183  Q
    ||||||||| ||| ||||||||||||| ||||||||| ||||   ||||||| ||||||||||||| | | ||||||||| || ||||||||||||||||    
T  52411649 catgactttattagggatgtcctttttaatatattcaagcggacaagagtatcagtgaagaaggagacgtttgtgaactttttaactgacccactagata 52411748  T
Q  184 gaagattg 191  Q
    ||||||||    
T  52411749 gaagattg 52411756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 206 - 384
Target Start/End: Complemental strand, 7901068 - 7900886
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgag----ggcttttacggtaagatatacatccctaaaagttgtgtcaa 301  Q
    ||||||||||||||||||||||||||  |||||| |||||| ||||||||| | |    | ||||||||||| ||   | ||||||||||  || |||||    
T  7901068 ggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggattaggggttgggtcttttacggtaggacggatatccctaaaaactgcgtcaa 7900969  T
Q  302 ataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
      ||| |  || ||||||||||||||| |||||||||||||| || |||||||||||||| || || |||||| |||||||||    
T  7900968 gcaaaatagccgaacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttcggcttccta 7900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 44198893 - 44198792
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaa 385  Q
    |||||||||| |||||  |||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| || |||||| || ||| |||    
T  44198893 ctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttcttaa 44198794  T
Q  386 ca 387  Q
    ||    
T  44198793 ca 44198792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 49018334 - 49018217
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||   ||||||  ||||||||  |||  || ||||||||  |||||||    
T  49018334 ttaagtacatacatgactttgttagggatgtgctttttgatatattcagacgggcaggagtatcggtgaagaataaggtgtcagtgaacttcctgactga 49018235  T
Q  173 cccactagatagaagatt 190  Q
    ||||||||||||||||||    
T  49018234 cccactagatagaagatt 49018217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 197 - 360
Target Start/End: Complemental strand, 37992552 - 37992384
Alignment:
Q  197 atgggtagg-ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgagggc-----ttttacggtaagatatacatccctaaa 290  Q
    ||||||||| ||||||||||  ||||||||||||| | |||||| | ||||| || ||||| |||| |     |||||||||| || ||| | ||||  |    
T  37992552 atgggtaggaggaaaacatgtgtgtgtggacttgatcggggtttcatcactcatgagatta-gaggtcgagatttttacggtaggacatatagccctgca 37992454  T
Q  291 agttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||||||| || ||||||| |||||    
T  37992453 agttgtgtcaaacaaagtgaccaaacatgaggaagcatgttctgacaatcaacatgattttatatcattt 37992384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 49018112 - 49018015
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    ||||||||||| || |  || |||| ||||||  || ||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  49018112 cttttacggtaggacaagcaaccctgaaagttacgtaaaacaaagtgaccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccattt 49018015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 37133007 - 37133055
Alignment:
Q  313 aaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttg 361  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37133007 aaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttg 37133055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 38670887 - 38670955
Alignment:
Q  312 caaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggctt 380  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||| || || ||||||||||||    
T  38670887 caaacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttggctt 38670955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 35236499 - 35236421
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggc 151  Q
    ||||| |||| ||||||||||||| |||||| |||||| ||||||| ||||||| | |||||| |||||||||||||||    
T  35236499 ttaagcacatgcatgactttgttaaggatgtacttttttatatatttaggcgggcgggagtatgagtgaagaaggaggc 35236421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 306 - 374
Target Start/End: Complemental strand, 32546901 - 32546833
Alignment:
Q  306 agtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||| || ||||||    
T  32546901 agtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacacttt 32546833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 44199138 - 44199022
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  |||||||||||||| |||||  ||||| |||||||||| ||||   |  ||| | ||||||||||||   ||||||||||  |||||||    
T  44199138 ttaagtacagacatgactttgttacagatgtatttttttatatattcagacgggcagggatatcaatgaagaaggaggtgcctgtgaacttcgtgactga 44199039  T
Q  173 cccactagatagaagat 189  Q
    |||||||||||||||||    
T  44199038 cccactagatagaagat 44199022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 596 - 751
Target Start/End: Complemental strand, 39611772 - 39611620
Alignment:
Q  596 aggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgttt 695  Q
    ||||||||| ||| |||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| |||||||| || || |||  ||||  |||||    
T  39611772 aggaaaatgctaa-aagtgtgctaagagcattgtttaagcattttaaagtagcaa-tttttgcactgaaaattgtacagttatgactttaacatatgttt 39611675  T
Q  696 gacttattttttcaaagcataatatcttttcatgggttccttaaacaataccttta 751  Q
    || || | ||||||| || |||| | |||| ||| ||| ||||||||||| |||||    
T  39611674 gatttgtattttcaatgcgtaat-tttttttatgagtttcttaaacaatatcttta 39611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 296 - 384
Target Start/End: Original strand, 7502002 - 7502091
Alignment:
Q  296 tgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtg-tttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| |||||||  |||||||||||||||||||||  ||||||||| || |||||||||||||| ||| || || |||||| ||||||    
T  7502002 tgtcaagtaaagtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttccta 7502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 7901221 - 7901107
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  |||||| ||||||  ||||| |||||||||||||| ||||||| |  |||||   ||||||||||| |  ||||||||||  |||||||    
T  7901221 ttaagtacaagcatgaccttgtta--gatgtactttttgatatatttaggcgggcggaagtatcgatgaagaaggagacgcctgtgaactttctgactga 7901124  T
Q  173 cccactagatagaagat 189  Q
    | |||||||||||||||    
T  7901123 ctcactagatagaagat 7901107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 263 - 384
Target Start/End: Original strand, 38978757 - 38978878
Alignment:
Q  263 cttttacggtaagatatacatccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgc 362  Q
    ||||||||||| || ||||| ||||||||||||||||||  ||| ||   | ||||| |||| ||| || ||||||||||  ||||||||||| |||||     
T  38978757 cttttacggtaggaaatacaaccctaaaagttgtgtcaagcaaattggttagacatgtgaaaacgtattttgacaatcaatatgtttttatactatttgt 38978856  T
Q  363 ttctggcacttttggcttccta 384  Q
    || || ||||||||| ||||||    
T  38978857 ttttgacacttttggtttccta 38978878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 694 - 770
Target Start/End: Original strand, 31580363 - 31580439
Alignment:
Q  694 ttgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    ||||||||| |||||||| |||||| | ||||  ||||||| |||||||||||| ||||||||| |||||| |||||    
T  31580363 ttgacttatattttcaaaacataatttttttttgtgggttctttaaacaatacccttaagacacttgttaacaagac 31580439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 675
Target Start/End: Complemental strand, 33865386 - 33865307
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggt 675  Q
    ||||||||||||||  |||| |||||   ||| |||||||||||||||||||||||| ||||||||||  |||||||||||    
T  33865386 aaggaaaatgttaacgagtgccctaaatacatcgtttaagcatataaaagtagcaac-ttttgcattggaaattgtacggt 33865307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 45676527 - 45676571
Alignment:
Q  78 tacattcatgactttgttacggatgtcctttttgatatattcagg 122  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||    
T  45676527 tacatgcatgactttgttatggatgtcctttttgatatattcagg 45676571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 53786080 - 53785972
Alignment:
Q  73 ttaagtacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactga 172  Q
    |||||||||  || |||||||||| |||||| ||||||||||||||||| ||||   |||||| |||||||||||| ||   |||||||||  | |||||    
T  53786080 ttaagtacagacacgactttgttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaaggaagcgcatgtgaacttcctaactga 53785981  T
Q  173 cccactaga 181  Q
    ||| |||||    
T  53785980 cccgctaga 53785972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 618 - 765
Target Start/End: Complemental strand, 6488912 - 6488766
Alignment:
Q  618 taagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttgacttattttttcaaagcataa 717  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||||  | || |||  ||||||||||  |||| | |||| ||   ||||    
T  6488912 taagggcattgtttaagcatttaaaagtagcaac-ttttgcattgaaaattgtactattatgactttaacaagtgttgtacttgtatttttaagatataa 6488814  T
Q  718 tatcttttcatgggttccttaaacaatacctttaagacacatgttaat 765  Q
    | ||||||  | ||||||||||||||| ||  || |||||||| ||||    
T  6488813 tctctttttgtaggttccttaaacaatgcccgtaggacacatgctaat 6488766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 39583022 - 39583081
Alignment:
Q  130 gagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    |||||| ||||||||||||||| | |||||||||  ||| ||||||||||||||||||||    
T  39583022 gagtatcagtgaagaaggaggcgtatgtgaactttctgattgacccactagatagaagat 39583081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 385 - 424
Target Start/End: Original strand, 46940902 - 46940941
Alignment:
Q  385 acaatgtcatgactcgtaggttcatgaatgttgtgtttac 424  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  46940902 acaatgtcatgactcataggttcatgaatgttgtgtttac 46940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 597 - 744
Target Start/End: Complemental strand, 48993506 - 48993361
Alignment:
Q  597 ggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtttg 696  Q
    |||||||| ||| |||||  | ||| ||||||||||||||| |||||||||||||||||| |||||  |||||||| ||  | |||  |||||| |||||    
T  48993506 ggaaaatgctaacaagtgcaccaagggcattgtttaagcatctaaaagtagcaacttttt-cattggaaattgtac-gttgtgactttaacaagggtttg 48993409  T
Q  697 acttattttttcaaagcataatatcttttcatgggttccttaaacaat 744  Q
    |||| | |||||||  |||||| || | |  |||||||||||||||||    
T  48993408 acttttattttcaagacataatttcctcttgtgggttccttaaacaat 48993361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 39583359 - 39583421
Alignment:
Q  386 caatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| ||| ||||||||||||||| ||||||||  |||||||||||  |||||||||    
T  39583359 caatgtcatgtctcctaggttcatgaatgtcgtgtttacgaggattgattttgccatccaaaa 39583421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 43123510 - 43123400
Alignment:
Q  78 tacattcatgactttgttacggatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccac 177  Q
    ||||| ||||||||||||| ||||||||||||| ||||||| ||| ||  ||||||||  ||| | |||||| |  || ||||||| ||| |||||||||    
T  43123510 tacatgcatgactttgttagggatgtccttttttatatatttaggtggacgagagtatctgtgtaaaaggagacgcctatgaacttcttgtctgacccac 43123411  T
Q  178 tagatagaaga 188  Q
     |||| |||||    
T  43123410 aagatggaaga 43123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 286 - 376
Target Start/End: Original strand, 46940751 - 46940841
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
    ||||||| || |||||  |||||| |||||||| ||||| | ||||| |||||||||| || |||||||||||||| || || ||||||||    
T  46940751 ctaaaagatgcgtcaagcaaagtggccaaacattagaaaacatgttccgacaatcaacatgcttttataccatttgtttttgacacttttg 46940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 52411903 - 52411973
Alignment:
Q  317 atgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    |||||| |||||||||||||||||||| || |||||| |||||||||| || ||||||  |||| ||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacactttcagctttctaaca 52411973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 384
Target Start/End: Complemental strand, 4473186 - 4473089
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||| ||| |||||  |||||| | |||||||| |||||||||||| || |||||  ||||||||||| ||||| || || |||||| |||||||||    
T  4473186 taaaaattgcgtcaagcaaagtgtcaaaacatgaaaaagcgtgttctaaccatcaatatgtttttatactatttgtttttgacactttcggcttccta 4473089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 26772738 - 26772673
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||| ||| ||| ||||| ||||||||||||||||||  |||||||||||  |||||||||    
T  26772738 taacaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattttgccatccaaaa 26772673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 3443292 - 3443367
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccattt 360  Q
    ||||||||||| |||||  ||| || |||||||||| |||| || |||| ||||||||| || |||||||||||||    
T  3443292 cctaaaagttgcgtcaagcaaaatggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattt 3443367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 4669790 - 4669860
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaagggtt 453  Q
    ||||||||||||| ||| | ||| ||||||||||||||||||   |||||||||| | |||||||| ||||    
T  4669790 taacaatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggtt 4669860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 7501908 - 7501954
Alignment:
Q  206 ggaaaacatgcatgtgtggacttgacccgggttttaccactcgtggg 252  Q
    ||||||||||||||||| ||||| ||| |||||| ||||||||||||    
T  7501908 ggaaaacatgcatgtgtagacttaaccagggtttcaccactcgtggg 7501954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 38146142 - 38146084
Alignment:
Q  326 cgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    |||||| ||||||||||| |||||||||||||||| | | || |||||||| |||||||    
T  38146142 cgtgttttgacaatcaacatgtttttataccatttacatttgacacttttgacttccta 38146084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 46940540 - 46940630
Alignment:
Q  99 gatgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    ||||||| ||||||||||||  || |||  ||| ||| |||||||||||||  |  ||||||| | ||||||||||||||||| |||||||    
T  46940540 gatgtccgttttgatatattttggtgggcaagaatatcagtgaagaaggagatcattgtgaacatattgactgacccactagacagaagat 46940630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 37992309 - 37992248
Alignment:
Q  387 aatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||||||||| || |||||||||||||||| |   ||||| |||| ||||||||||    
T  37992309 aatgtcatgactcgtacgtgcatgaatgttgtgttttcgaagattggttttatcatccaaaa 37992248  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 38146036 - 38145971
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    ||||||||||||| ||| ||||| |||||| |||||||||||   |||||||||| ||||| ||||    
T  38146036 taacaatgtcatgtctcctaggtccatgaacgttgtgtttacgatgattgattttgtcatctaaaa 38145971  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 189
Target Start/End: Complemental strand, 38146404 - 38146315
Alignment:
Q  100 atgtcctttttgatatattcaggcgggtgagagtattagtgaagaaggaggcctctgtgaacttgttgactgacccactagatagaagat 189  Q
    ||||||||||||||||||| ||| |||   |||||| ||||||||| ||||    |||||||||  | ||||||| ||||||||||||||    
T  38146404 atgtcctttttgatatatttaggtgggcaggagtataagtgaagaatgaggtgcttgtgaactttctcactgaccaactagatagaagat 38146315  T

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Target: scaffold0490 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 207 - 374
Target Start/End: Complemental strand, 6542 - 6372
Alignment:
Q  207 gaaaacatgcatgtgtggacttgacccgggttttaccactcgtgggattatgaggg---cttttacggtaagatatacatccctaaaagttgtgtcaaat 303  Q
    |||||||||| ||||| ||||||||  |||||| |||||| ||||||||| |   |   ||||||| ||| || | ||| |||||||||||| ||||| |    
T  6542 gaaaacatgcttgtgtagacttgactggggtttcaccacttgtgggattagggtcggaccttttaccgtaggacagacagccctaaaagttgcgtcaagt 6443  T
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||| || ||||||    
T  6442 aaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacacttt 6372  T

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Target: scaffold0148 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 33358 - 33275
Alignment:
Q  304 aaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcctaaca 387  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||| || || ||| || |||||||||    
T  33358 aaagtggctaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttacttttgacattttcggtttcctaaca 33275  T

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Target: scaffold0031 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 49539 - 49436
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttcct 383  Q
    ||||||||||||  ||||| ||||||  ||||  ||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||| | |||| |    
T  49539 ccctaaaagttgcatcaaacaaagtggtcaaatgtgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacactttcgacttctt 49440  T
Q  384 aaca 387  Q
    ||||    
T  49439 aaca 49436  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 595 - 770
Target Start/End: Original strand, 433847 - 434019
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttttgcattgagaattgtacggtaataactccaacaagtgtt 694  Q
    ||||||||| ||||||||||  |||||   ||||||||||||||||||||||||||| ||| | ||||  |||||||   | || |||  ||||||||||    
T  433847 aaggaaaatattaataagtgctctaaggatattgtttaagcatataaaagtagcaac-tttcgtattgtaaattgta--attatgactttaacaagtgtt 433943  T
Q  695 tgacttattttttcaaagcataatatcttttcatgggttccttaaacaatacctttaagacacatgttaataagac 770  Q
    |||||||| |||||||  |||||| | ||||  |||||| |||||||||| || |||||  || |||||| |||||    
T  433944 tgacttatattttcaagacataatttttttttgtgggtttcttaaacaatgcccttaaggtacttgttaacaagac 434019  T

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Target: scaffold0470 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 7727 - 7640
Alignment:
Q  287 taaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttt 374  Q
    ||||||||| |||||||| |||    ||||||||||||||||||||| ||||||||| || ||||| ||||||||||| || ||||||    
T  7727 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacacttt 7640  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 47519 - 47598
Alignment:
Q  285 cctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgctt 364  Q
    ||||||||||| ||||| |||| || ||||||||||||||  ||||||||||| | ||| | ||||||||||||||||||    
T  47519 cctaaaagttgcgtcaagtaaaatggccaaacatgagaaaatgtgttctgacagttaacatatttttataccatttgctt 47598  T

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Target: scaffold0493 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 8525 - 8595
Alignment:
Q  314 aacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||| | |  ||||||||| ||||||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttccta 8595  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 311 - 384
Target Start/End: Complemental strand, 103206 - 103134
Alignment:
Q  311 ccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttggcttccta 384  Q
    ||||||| |||||||||||| |||||||||||| || ||||||||||||||||| || |||||| || ||||||    
T  103206 ccaaacacgagaaagcgtgt-ctgacaatcaacatgcttttataccatttgcttttgacactttcggtttccta 103134  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Complemental strand, 103086 - 103021
Alignment:
Q  383 taacaatgtcatgactcgtaggttcatgaatgttgtgtttacccggattgattttttcatccaaaa 448  Q
    |||||||||| || ||| ||||| ||||||||||||||||||  |||||| ||||  |||||||||    
T  103086 taacaatgtcgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaa 103021  T

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Target: scaffold0224 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 18344 - 18435
Alignment:
Q  284 ccctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttataccatttgcttctggcacttttg 376  Q
    ||||||||||||  ||||| |||| | |||||||||||||| |||||||| ||||||||| |||||||||  ||| ||||| || ||||||||    
T  18344 ccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttg 18435  T

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Target: scaffold0119 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 16260 - 16191
Alignment:
Q  286 ctaaaagttgtgtcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgtttttatac 355  Q
    ||||||| || |||||| ||| || |||||||||||||| | |||||||||||| ||| |||||||||||    
T  16260 ctaaaagctgcgtcaaacaaaatggccaaacatgagaaaacatgttctgacaataaacatgtttttatac 16191  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 595 - 655
Target Start/End: Original strand, 171560 - 171620
Alignment:
Q  595 aaggaaaatgttaataagtgtcctaagagcattgtttaagcatataaaagtagcaactttt 655  Q
    |||||||||| ||| ||||| | ||| | |||||||||||||| |||||||||||||||||    
T  171560 aaggaaaatgctaacaagtgccttaaaaacattgtttaagcatctaaaagtagcaactttt 171620  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 37444 - 37391
Alignment:
Q  298 tcaaataaagtgaccaaacatgagaaagcgtgttctgacaatcaacgtgttttt 351  Q
    ||||| ||| ||| ||||||||||||||| | |||||||||||||| |||||||    
T  37444 tcaaacaaaatgatcaaacatgagaaagcatattctgacaatcaacatgttttt 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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