View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2640_high_18 (Length: 440)

Name: NF2640_high_18
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2640_high_18
NF2640_high_18
[»] chr7 (95 HSPs)
chr7 (224-319)||(29735975-29736070)
chr7 (28-200)||(29735788-29735952)
chr7 (352-410)||(20261587-20261645)
chr7 (331-411)||(2935765-2935845)
chr7 (331-410)||(27619639-27619718)
chr7 (17-122)||(29732422-29732530)
chr7 (356-410)||(40400917-40400971)
chr7 (356-414)||(42813580-42813638)
chr7 (349-410)||(29823338-29823399)
chr7 (328-408)||(22264444-22264519)
chr7 (348-412)||(40344440-40344504)
chr7 (329-435)||(29736119-29736226)
chr7 (357-408)||(30738206-30738257)
chr7 (348-410)||(6184659-6184720)
chr7 (348-410)||(11639903-11639965)
chr7 (348-410)||(14078363-14078425)
chr7 (348-410)||(14388391-14388453)
chr7 (328-414)||(36688861-36688942)
chr7 (349-410)||(38790080-38790141)
chr7 (356-412)||(25950-26006)
chr7 (348-412)||(317961-318025)
chr7 (348-412)||(6185336-6185400)
chr7 (348-412)||(6191852-6191916)
chr7 (348-412)||(25606931-25606995)
chr7 (356-408)||(29615531-29615583)
chr7 (348-412)||(29824033-29824097)
chr7 (348-411)||(8122634-8122697)
chr7 (348-411)||(22263770-22263833)
chr7 (354-409)||(48981886-48981941)
chr7 (348-410)||(317285-317347)
chr7 (356-410)||(3341446-3341500)
chr7 (348-410)||(5228644-5228706)
chr7 (358-412)||(5951668-5951722)
chr7 (357-411)||(19156080-19156134)
chr7 (357-411)||(20755479-20755533)
chr7 (356-410)||(22711649-22711703)
chr7 (348-410)||(27144188-27144250)
chr7 (347-409)||(42813028-42813090)
chr7 (369-414)||(11696237-11696282)
chr7 (361-410)||(28308676-28308725)
chr7 (354-410)||(25269-25325)
chr7 (348-412)||(2146878-2146942)
chr7 (348-412)||(38670002-38670066)
chr7 (354-410)||(40401557-40401613)
chr7 (354-410)||(46011125-46011181)
chr7 (357-408)||(2790096-2790147)
chr7 (83-122)||(6931923-6931962)
chr7 (327-406)||(8535443-8535517)
chr7 (356-411)||(10412560-10412615)
chr7 (348-411)||(16425344-16425407)
chr7 (354-409)||(38790747-38790802)
chr7 (348-410)||(2146043-2146105)
chr7 (358-412)||(19435299-19435353)
chr7 (356-410)||(25607617-25607671)
chr7 (357-411)||(32388152-32388206)
chr7 (348-410)||(32867251-32867313)
chr7 (348-414)||(36848499-36848565)
chr7 (348-410)||(38670689-38670751)
chr7 (357-410)||(32867908-32867961)
chr7 (351-408)||(43450109-43450166)
chr7 (331-411)||(13904437-13904512)
chr7 (348-408)||(23742666-23742726)
chr7 (354-410)||(34999198-34999254)
chr7 (358-410)||(38987769-38987821)
chr7 (354-410)||(40343771-40343827)
chr7 (358-406)||(45941469-45941517)
chr7 (348-411)||(3340780-3340843)
chr7 (369-412)||(29736694-29736737)
chr7 (359-414)||(30869926-30869981)
chr7 (359-410)||(31221461-31221512)
chr7 (354-412)||(11640983-11641041)
chr7 (372-410)||(12677130-12677168)
chr7 (352-410)||(13068412-13068470)
chr7 (357-411)||(20261020-20261074)
chr7 (349-387)||(20261641-20261679)
chr7 (356-410)||(23742013-23742067)
chr7 (357-410)||(24679893-24679946)
chr7 (358-412)||(28308014-28308068)
chr7 (145-191)||(29732362-29732408)
chr7 (361-411)||(29736796-29736846)
chr7 (356-410)||(36687311-36687365)
chr7 (348-410)||(36847839-36847901)
chr7 (348-410)||(48982544-48982606)
chr7 (359-427)||(19333038-19333107)
chr7 (365-406)||(29616227-29616268)
chr7 (365-410)||(30870584-30870629)
chr7 (369-410)||(33869221-33869262)
chr7 (367-412)||(33869319-33869364)
chr7 (359-408)||(34835487-34835536)
chr7 (354-410)||(48872021-48872080)
chr7 (348-408)||(1573085-1573145)
chr7 (356-408)||(12677750-12677802)
chr7 (356-408)||(12679645-12679697)
chr7 (348-408)||(31220805-31220865)
chr7 (348-412)||(32867803-32867867)
[»] chr4 (102 HSPs)
chr4 (238-316)||(32929959-32930038)
chr4 (356-414)||(38720621-38720679)
chr4 (348-410)||(19313352-19313414)
chr4 (331-411)||(13395179-13395259)
chr4 (361-409)||(13772389-13772437)
chr4 (331-410)||(754858-754937)
chr4 (348-410)||(13771725-13771787)
chr4 (331-409)||(56310073-56310146)
chr4 (328-410)||(13482175-13482252)
chr4 (359-411)||(30192527-30192579)
chr4 (354-410)||(41919914-41919970)
chr4 (354-412)||(23265788-23265846)
chr4 (348-410)||(26705675-26705737)
chr4 (348-410)||(35667572-35667634)
chr4 (348-410)||(47030488-47030550)
chr4 (349-410)||(46095414-46095475)
chr4 (354-410)||(616137-616193)
chr4 (348-412)||(7165403-7165467)
chr4 (348-412)||(12250681-12250745)
chr4 (348-412)||(13392755-13392819)
chr4 (348-412)||(13395894-13395958)
chr4 (354-410)||(23722057-23722113)
chr4 (354-410)||(25010063-25010119)
chr4 (348-412)||(47029824-47029888)
chr4 (354-410)||(55815003-55815059)
chr4 (327-411)||(721313-721392)
chr4 (363-410)||(4949956-4950003)
chr4 (348-411)||(7479351-7479414)
chr4 (348-411)||(10155510-10155573)
chr4 (348-411)||(35667386-35667449)
chr4 (355-410)||(35667762-35667817)
chr4 (348-410)||(7166084-7166146)
chr4 (348-410)||(8192996-8193058)
chr4 (348-410)||(17730186-17730248)
chr4 (356-414)||(23308813-23308871)
chr4 (348-410)||(35667289-35667351)
chr4 (348-410)||(55068850-55068912)
chr4 (348-409)||(6711239-6711300)
chr4 (361-410)||(16192321-16192370)
chr4 (328-410)||(18362703-18362780)
chr4 (369-414)||(21037326-21037371)
chr4 (354-411)||(28464214-28464271)
chr4 (349-410)||(33047235-33047296)
chr4 (328-410)||(36600146-36600223)
chr4 (328-406)||(48372407-48372480)
chr4 (354-411)||(51019664-51019721)
chr4 (354-410)||(19314019-19314075)
chr4 (348-408)||(20545026-20545086)
chr4 (355-403)||(28464822-28464870)
chr4 (363-411)||(29429704-29429752)
chr4 (348-412)||(46096123-46096187)
chr4 (348-412)||(46138624-46138688)
chr4 (362-410)||(56309435-56309483)
chr4 (83-122)||(507987-508026)
chr4 (327-411)||(755531-755610)
chr4 (348-427)||(7479968-7480047)
chr4 (348-411)||(7797618-7797681)
chr4 (357-412)||(23309482-23309537)
chr4 (359-410)||(54096721-54096772)
chr4 (354-412)||(615447-615505)
chr4 (348-410)||(721985-722047)
chr4 (348-410)||(796390-796452)
chr4 (348-406)||(6232357-6232415)
chr4 (354-412)||(6232434-6232492)
chr4 (348-410)||(6233109-6233171)
chr4 (348-410)||(17722757-17722819)
chr4 (348-410)||(23269175-23269237)
chr4 (354-411)||(35665965-35666022)
chr4 (356-410)||(37423795-37423849)
chr4 (354-410)||(6233792-6233848)
chr4 (330-411)||(7796940-7797016)
chr4 (357-410)||(37708791-37708844)
chr4 (357-410)||(50824644-50824697)
chr4 (354-414)||(23721393-23721452)
chr4 (356-411)||(36687267-36687322)
chr4 (354-414)||(37423156-37423216)
chr4 (327-410)||(4950601-4950679)
chr4 (368-411)||(13482804-13482847)
chr4 (359-410)||(16960223-16960274)
chr4 (356-411)||(26809051-26809106)
chr4 (354-412)||(33046573-33046631)
chr4 (359-410)||(37424452-37424503)
chr4 (357-411)||(32448945-32448999)
chr4 (348-410)||(36898105-36898167)
chr4 (362-408)||(45847156-45847202)
chr4 (348-410)||(47931236-47931298)
chr4 (348-409)||(7851722-7851783)
chr4 (354-410)||(33032173-33032229)
chr4 (348-405)||(33032831-33032883)
chr4 (365-414)||(36651271-36651320)
chr4 (348-408)||(44664713-44664773)
chr4 (361-410)||(45847773-45847822)
chr4 (369-410)||(46076377-46076418)
chr4 (357-408)||(7478688-7478737)
chr4 (354-410)||(16960880-16960936)
chr4 (356-411)||(17201949-17202004)
chr4 (356-435)||(29979071-29979151)
chr4 (356-411)||(36687883-36687938)
chr4 (354-406)||(37709576-37709628)
chr4 (359-411)||(37735484-37735536)
chr4 (354-410)||(44665191-44665247)
chr4 (354-410)||(55140016-55140071)
[»] chr1 (77 HSPs)
chr1 (356-414)||(44645275-44645333)
chr1 (331-408)||(27226333-27226410)
chr1 (331-410)||(19072364-19072438)
chr1 (331-410)||(19120254-19120328)
chr1 (348-411)||(45738006-45738069)
chr1 (355-410)||(49129018-49129073)
chr1 (356-410)||(19071726-19071780)
chr1 (356-410)||(19119616-19119670)
chr1 (327-410)||(50144057-50144135)
chr1 (348-408)||(18407209-18407269)
chr1 (354-410)||(36605406-36605462)
chr1 (356-410)||(8061040-8061094)
chr1 (348-410)||(16536378-16536440)
chr1 (348-410)||(41321519-41321581)
chr1 (355-412)||(25068338-25068395)
chr1 (354-410)||(4601709-4601765)
chr1 (354-414)||(44648632-44648692)
chr1 (354-410)||(45737317-45737373)
chr1 (328-414)||(16537022-16537102)
chr1 (357-411)||(12126547-12126601)
chr1 (354-412)||(25813034-25813092)
chr1 (349-411)||(27225683-27225745)
chr1 (354-412)||(41322199-41322257)
chr1 (354-408)||(42830550-42830604)
chr1 (354-412)||(52505978-52506036)
chr1 (363-412)||(1114886-1114935)
chr1 (354-411)||(7306971-7307028)
chr1 (361-410)||(18406549-18406598)
chr1 (356-409)||(27532584-27532637)
chr1 (348-409)||(28971468-28971529)
chr1 (357-410)||(46683698-46683751)
chr1 (358-414)||(51611816-51611872)
chr1 (348-412)||(19997610-19997674)
chr1 (348-411)||(36604733-36604796)
chr1 (356-408)||(50143399-50143451)
chr1 (359-410)||(794753-794804)
chr1 (354-409)||(1846546-1846601)
chr1 (355-410)||(17110022-17110077)
chr1 (367-414)||(19610937-19610984)
chr1 (356-411)||(41576016-41576071)
chr1 (331-410)||(47292246-47292325)
chr1 (348-410)||(1845866-1845928)
chr1 (348-410)||(17109312-17109373)
chr1 (348-406)||(27930771-27930829)
chr1 (348-410)||(42831207-42831269)
chr1 (358-408)||(45559772-45559822)
chr1 (356-410)||(51362492-51362546)
chr1 (330-395)||(1386637-1386702)
chr1 (361-410)||(29510484-29510533)
chr1 (357-406)||(33126200-33126249)
chr1 (354-411)||(45738675-45738732)
chr1 (361-409)||(4007572-4007620)
chr1 (354-410)||(19611328-19611384)
chr1 (354-410)||(23739822-23739878)
chr1 (348-408)||(27521945-27522005)
chr1 (354-410)||(28044491-28044547)
chr1 (348-412)||(38011177-38011241)
chr1 (359-410)||(831939-831990)
chr1 (359-406)||(1117047-1117094)
chr1 (372-411)||(29344551-29344590)
chr1 (355-406)||(33113126-33113177)
chr1 (348-410)||(41575180-41575242)
chr1 (372-411)||(41575847-41575886)
chr1 (357-408)||(43319931-43319982)
chr1 (365-408)||(47553160-47553203)
chr1 (361-408)||(49129683-49129730)
chr1 (361-410)||(4667548-4667602)
chr1 (361-411)||(11916470-11916520)
chr1 (356-410)||(38011859-38011913)
chr1 (356-410)||(43504464-43504518)
chr1 (354-408)||(47233072-47233126)
chr1 (348-410)||(52505300-52505362)
chr1 (354-407)||(1116446-1116499)
chr1 (363-408)||(27931313-27931358)
chr1 (358-410)||(2275105-2275157)
chr1 (348-408)||(15356940-15357000)
chr1 (356-408)||(28045152-28045204)
[»] scaffold0340 (1 HSPs)
scaffold0340 (348-408)||(12867-12927)
[»] chr6 (70 HSPs)
chr6 (331-411)||(9240848-9240928)
chr6 (359-412)||(3767082-3767135)
chr6 (348-408)||(14313857-14313917)
chr6 (328-412)||(14873701-14873780)
chr6 (331-411)||(22342087-22342167)
chr6 (356-414)||(7448243-7448301)
chr6 (356-410)||(22022280-22022334)
chr6 (348-410)||(25527736-25527798)
chr6 (354-412)||(25528421-25528479)
chr6 (363-424)||(33266662-33266723)
chr6 (348-412)||(9241543-9241607)
chr6 (348-412)||(11523481-11523545)
chr6 (348-427)||(14306798-14306878)
chr6 (348-412)||(34280022-34280086)
chr6 (348-412)||(34709921-34709985)
chr6 (331-410)||(10702265-10702339)
chr6 (356-410)||(6936390-6936443)
chr6 (348-410)||(11522806-11522868)
chr6 (348-410)||(12026203-12026265)
chr6 (348-410)||(25577207-25577269)
chr6 (348-410)||(33950232-33950294)
chr6 (361-410)||(21802610-21802659)
chr6 (361-414)||(34794524-34794577)
chr6 (354-410)||(3767752-3767808)
chr6 (358-410)||(4125893-4125945)
chr6 (348-412)||(5443694-5443758)
chr6 (348-412)||(12025523-12025587)
chr6 (348-408)||(14873024-14873084)
chr6 (356-412)||(22268525-22268581)
chr6 (356-412)||(27923753-27923809)
chr6 (83-122)||(14544473-14544512)
chr6 (348-410)||(17307212-17307274)
chr6 (354-412)||(187782-187840)
chr6 (361-411)||(2091707-2091757)
chr6 (348-410)||(2522675-2522737)
chr6 (348-410)||(7448896-7448958)
chr6 (348-410)||(11794773-11794835)
chr6 (348-410)||(12033123-12033185)
chr6 (356-406)||(14224500-14224550)
chr6 (356-410)||(21801953-21802007)
chr6 (361-411)||(32522508-32522558)
chr6 (329-410)||(5442998-5443079)
chr6 (355-424)||(5916104-5916173)
chr6 (354-411)||(30461453-30461510)
chr6 (354-411)||(31882514-31882571)
chr6 (354-411)||(32130949-32131005)
chr6 (361-410)||(33307828-33307877)
chr6 (354-411)||(34250713-34250770)
chr6 (359-411)||(2092342-2092394)
chr6 (358-410)||(4100531-4100583)
chr6 (356-411)||(10702939-10702994)
chr6 (354-410)||(12766959-12767015)
chr6 (358-410)||(16326076-16326128)
chr6 (358-410)||(16349474-16349526)
chr6 (354-410)||(31881853-31881909)
chr6 (348-411)||(2523342-2523405)
chr6 (348-383)||(3751920-3751955)
chr6 (348-410)||(12693852-12693914)
chr6 (348-411)||(14313198-14313261)
chr6 (354-409)||(34250075-34250130)
chr6 (348-410)||(188439-188501)
chr6 (361-410)||(4101130-4101177)
chr6 (361-410)||(4126493-4126540)
chr6 (348-410)||(7127663-7127725)
chr6 (369-411)||(12767611-12767653)
chr6 (369-411)||(21847374-21847416)
chr6 (348-402)||(28023567-28023621)
chr6 (354-408)||(32521848-32521902)
chr6 (362-411)||(22342208-22342257)
chr6 (362-406)||(2655593-2655637)
[»] chr5 (75 HSPs)
chr5 (354-414)||(6029467-6029527)
chr5 (363-414)||(31850026-31850077)
chr5 (348-410)||(27979905-27979967)
chr5 (349-410)||(36742129-36742190)
chr5 (348-427)||(13685975-13686055)
chr5 (331-407)||(17781157-17781232)
chr5 (356-411)||(10687603-10687658)
chr5 (348-407)||(13686630-13686689)
chr5 (348-410)||(4877380-4877442)
chr5 (328-406)||(6031358-6031431)
chr5 (358-412)||(32050619-32050673)
chr5 (348-410)||(35751523-35751585)
chr5 (349-411)||(42598992-42599054)
chr5 (345-406)||(1932031-1932091)
chr5 (355-412)||(4055412-4055469)
chr5 (354-407)||(17781265-17781318)
chr5 (348-413)||(31476967-31477032)
chr5 (348-408)||(4876717-4876777)
chr5 (354-410)||(19408552-19408608)
chr5 (348-412)||(20540985-20541049)
chr5 (348-412)||(20691121-20691185)
chr5 (348-408)||(31850667-31850727)
chr5 (347-411)||(36762120-36762184)
chr5 (348-412)||(37333910-37333974)
chr5 (348-412)||(37657388-37657452)
chr5 (356-411)||(13280151-13280206)
chr5 (358-409)||(21687375-21687426)
chr5 (331-406)||(27028650-27028725)
chr5 (348-411)||(36737453-36737516)
chr5 (348-410)||(9118842-9118904)
chr5 (348-410)||(20570135-20570197)
chr5 (354-412)||(24624830-24624888)
chr5 (354-408)||(27979244-27979298)
chr5 (354-411)||(8572712-8572769)
chr5 (369-414)||(12586275-12586320)
chr5 (354-411)||(14594082-14594139)
chr5 (354-411)||(17781050-17781106)
chr5 (357-410)||(20570833-20570886)
chr5 (354-410)||(1931301-1931357)
chr5 (358-410)||(8573354-8573406)
chr5 (348-412)||(9119551-9119615)
chr5 (359-410)||(6048003-6048054)
chr5 (360-411)||(9017666-9017717)
chr5 (354-409)||(18523741-18523796)
chr5 (348-410)||(1199750-1199812)
chr5 (354-408)||(3933986-3934040)
chr5 (356-406)||(10688269-10688319)
chr5 (354-408)||(15145086-15145140)
chr5 (348-406)||(18524373-18524431)
chr5 (328-411)||(20184018-20184096)
chr5 (352-410)||(21639029-21639087)
chr5 (348-410)||(22731065-22731127)
chr5 (348-406)||(32020471-32020529)
chr5 (369-410)||(1406241-1406282)
chr5 (369-410)||(4717278-4717319)
chr5 (358-410)||(17780363-17780415)
chr5 (365-410)||(20260009-20260054)
chr5 (349-410)||(37658080-37658141)
chr5 (354-410)||(8007074-8007130)
chr5 (359-411)||(15175223-15175275)
chr5 (359-411)||(17967837-17967889)
chr5 (358-410)||(20183377-20183429)
chr5 (354-402)||(38498043-38498091)
chr5 (356-411)||(3933321-3933376)
chr5 (363-410)||(5138970-5139017)
chr5 (348-434)||(15175852-15175939)
chr5 (348-410)||(20691803-20691865)
chr5 (359-410)||(32458518-32458569)
chr5 (356-406)||(5138314-5138364)
chr5 (356-406)||(9018318-9018368)
chr5 (348-410)||(24625500-24625562)
chr5 (356-402)||(34347161-34347207)
chr5 (354-408)||(40957422-40957476)
chr5 (354-411)||(15144425-15144482)
chr5 (354-403)||(22730418-22730467)
[»] chr3 (91 HSPs)
chr3 (331-411)||(1764297-1764377)
chr3 (328-411)||(14600366-14600449)
chr3 (349-414)||(1263060-1263125)
chr3 (348-427)||(1262406-1262486)
chr3 (354-410)||(4757010-4757066)
chr3 (356-435)||(30605325-30605405)
chr3 (354-410)||(45241216-45241272)
chr3 (348-410)||(11345364-11345426)
chr3 (356-410)||(16067900-16067954)
chr3 (348-410)||(18364639-18364701)
chr3 (348-410)||(18365286-18365348)
chr3 (348-410)||(27255294-27255356)
chr3 (348-410)||(37183087-37183149)
chr3 (348-414)||(44950987-44951053)
chr3 (349-410)||(19547035-19547096)
chr3 (354-411)||(54403574-54403631)
chr3 (358-410)||(1364057-1364109)
chr3 (348-412)||(22130400-22130464)
chr3 (348-412)||(41864986-41865050)
chr3 (356-427)||(44500030-44500102)
chr3 (361-408)||(16067246-16067293)
chr3 (348-411)||(27255978-27256041)
chr3 (328-408)||(40974030-40974105)
chr3 (331-410)||(41587316-41587395)
chr3 (331-410)||(44950301-44950380)
chr3 (348-410)||(3090423-3090485)
chr3 (348-410)||(10887719-10887781)
chr3 (348-410)||(23309625-23309687)
chr3 (354-408)||(49765136-49765190)
chr3 (354-411)||(13623190-13623247)
chr3 (349-410)||(40974703-40974764)
chr3 (354-411)||(49764505-49764562)
chr3 (348-412)||(4558742-4558806)
chr3 (348-412)||(10888407-10888471)
chr3 (348-412)||(11056563-11056627)
chr3 (348-412)||(11414484-11414547)
chr3 (348-412)||(23308945-23309009)
chr3 (361-408)||(1779360-1779407)
chr3 (348-411)||(7725410-7725473)
chr3 (83-122)||(9293023-9293062)
chr3 (348-407)||(13625913-13625972)
chr3 (356-411)||(14601029-14601084)
chr3 (354-413)||(47793998-47794057)
chr3 (348-407)||(49079968-49080027)
chr3 (348-410)||(291788-291850)
chr3 (356-410)||(1763660-1763714)
chr3 (360-410)||(2756612-2756662)
chr3 (348-410)||(4558041-4558103)
chr3 (348-410)||(9830283-9830345)
chr3 (348-410)||(14602115-14602177)
chr3 (356-410)||(27396710-27396764)
chr3 (354-408)||(27639157-27639211)
chr3 (366-435)||(32222069-32222139)
chr3 (358-412)||(33115237-33115291)
chr3 (356-410)||(40036401-40036455)
chr3 (348-410)||(40927502-40927564)
chr3 (354-408)||(47794659-47794713)
chr3 (329-410)||(3089745-3089821)
chr3 (361-406)||(33979290-33979335)
chr3 (358-411)||(45307362-45307414)
chr3 (354-411)||(48224141-48224198)
chr3 (357-410)||(54605780-54605833)
chr3 (367-408)||(55204968-55205009)
chr3 (348-412)||(11388973-11389037)
chr3 (354-414)||(20030579-20030639)
chr3 (348-412)||(24542319-24542383)
chr3 (354-410)||(27395080-27395136)
chr3 (354-410)||(30604690-30604746)
chr3 (354-410)||(32737176-32737232)
chr3 (348-412)||(37183763-37183827)
chr3 (358-410)||(49080614-49080666)
chr3 (354-410)||(54606429-54606485)
chr3 (359-410)||(6293226-6293277)
chr3 (359-414)||(32373316-32373371)
chr3 (361-408)||(37973460-37973507)
chr3 (357-410)||(8449822-8449880)
chr3 (348-410)||(20029913-20029975)
chr3 (354-412)||(22524804-22524862)
chr3 (356-414)||(25480544-25480602)
chr3 (348-410)||(48842028-48842089)
chr3 (348-409)||(53490058-53490119)
chr3 (348-409)||(11344700-11344761)
chr3 (365-406)||(25259947-25259988)
chr3 (357-406)||(30106221-30106270)
chr3 (354-411)||(32255729-32255786)
chr3 (354-410)||(41586660-41586718)
chr3 (348-412)||(4757107-4757171)
chr3 (348-408)||(10688797-10688857)
chr3 (348-408)||(20612116-20612176)
chr3 (348-408)||(27394261-27394320)
chr3 (363-411)||(48223584-48223632)
[»] chr2 (80 HSPs)
chr2 (354-411)||(11563809-11563866)
chr2 (354-408)||(1366420-1366474)
chr2 (348-410)||(37199605-37199667)
chr2 (348-408)||(5475141-5475201)
chr2 (348-408)||(34173721-34173781)
chr2 (354-404)||(12414301-12414351)
chr2 (354-404)||(12426361-12426411)
chr2 (354-408)||(35658880-35658934)
chr2 (361-411)||(38910694-38910744)
chr2 (356-410)||(44332388-44332442)
chr2 (361-410)||(13873991-13874040)
chr2 (361-410)||(14014116-14014165)
chr2 (354-410)||(3515478-3515534)
chr2 (358-410)||(7939999-7940051)
chr2 (362-410)||(41078164-41078212)
chr2 (354-410)||(43439141-43439197)
chr2 (348-427)||(11796798-11796877)
chr2 (348-411)||(34248067-34248130)
chr2 (356-410)||(3044942-3044996)
chr2 (349-411)||(16111171-16111233)
chr2 (372-410)||(26196237-26196275)
chr2 (348-410)||(33146041-33146103)
chr2 (354-411)||(7939339-7939396)
chr2 (354-411)||(37009007-37009064)
chr2 (349-410)||(40769375-40769436)
chr2 (348-408)||(4437318-4437378)
chr2 (354-410)||(17829063-17829119)
chr2 (354-410)||(20894286-20894342)
chr2 (354-410)||(22606988-22607044)
chr2 (354-410)||(34173058-34173114)
chr2 (348-412)||(38973148-38973212)
chr2 (354-410)||(41521708-41521764)
chr2 (359-410)||(4437984-4438035)
chr2 (348-411)||(22606322-22606385)
chr2 (359-410)||(37330380-37330431)
chr2 (359-410)||(40947449-40947500)
chr2 (348-410)||(6229890-6229952)
chr2 (348-410)||(11051565-11051627)
chr2 (356-410)||(28167554-28167608)
chr2 (348-406)||(31597231-31597289)
chr2 (361-411)||(31597820-31597870)
chr2 (361-411)||(32875176-32875226)
chr2 (329-407)||(33476565-33476638)
chr2 (348-410)||(35899144-35899206)
chr2 (352-410)||(41077504-41077562)
chr2 (327-427)||(3045586-3045682)
chr2 (357-410)||(8313671-8313724)
chr2 (354-411)||(31363906-31363963)
chr2 (348-412)||(20893210-20893274)
chr2 (348-412)||(34247389-34247453)
chr2 (356-412)||(35657453-35657509)
chr2 (348-412)||(35899822-35899886)
chr2 (348-408)||(35954002-35954062)
chr2 (354-410)||(43656920-43656976)
chr2 (348-412)||(43657596-43657660)
chr2 (356-411)||(11563633-11563688)
chr2 (359-410)||(15007106-15007157)
chr2 (349-412)||(16110488-16110551)
chr2 (359-410)||(38911338-38911388)
chr2 (356-410)||(552513-552567)
chr2 (364-410)||(10357126-10357172)
chr2 (348-410)||(11796146-11796208)
chr2 (356-410)||(14335713-14335767)
chr2 (348-410)||(15006437-15006498)
chr2 (356-414)||(31709739-31709797)
chr2 (361-411)||(32879418-32879466)
chr2 (348-410)||(33146708-33146770)
chr2 (369-411)||(36143284-36143326)
chr2 (356-410)||(37009665-37009719)
chr2 (367-408)||(1534192-1534233)
chr2 (369-410)||(11564474-11564515)
chr2 (361-414)||(24758137-24758190)
chr2 (348-408)||(42791459-42791519)
chr2 (348-412)||(551837-551896)
chr2 (354-410)||(5113615-5113670)
chr2 (354-414)||(24758781-24758841)
chr2 (354-410)||(34830765-34830821)
chr2 (354-410)||(37198941-37198992)
chr2 (348-412)||(39160285-39160349)
chr2 (348-412)||(39208845-39208909)
[»] chr8 (77 HSPs)
chr8 (348-408)||(14879529-14879589)
chr8 (352-410)||(40791059-40791117)
chr8 (329-414)||(4855936-4856016)
chr8 (348-412)||(25597782-25597846)
chr8 (354-414)||(34679926-34679986)
chr8 (347-410)||(11760073-11760136)
chr8 (348-410)||(3075315-3075377)
chr8 (347-409)||(8442664-8442726)
chr8 (348-410)||(11141067-11141129)
chr8 (348-414)||(11759397-11759463)
chr8 (354-411)||(14880193-14880250)
chr8 (330-410)||(43764074-43764149)
chr8 (331-410)||(14363766-14363846)
chr8 (348-407)||(24810265-24810323)
chr8 (355-410)||(31739525-31739580)
chr8 (352-411)||(32904224-32904283)
chr8 (359-414)||(37872290-37872345)
chr8 (358-408)||(5551572-5551622)
chr8 (354-408)||(6099484-6099538)
chr8 (348-410)||(17564677-17564739)
chr8 (348-410)||(22934298-22934360)
chr8 (356-410)||(36016765-36016819)
chr8 (348-410)||(39998379-39998441)
chr8 (348-414)||(44284352-44284418)
chr8 (361-410)||(8437919-8437968)
chr8 (355-408)||(17496934-17496986)
chr8 (354-411)||(24778003-24778060)
chr8 (354-411)||(32905332-32905389)
chr8 (348-408)||(6293205-6293265)
chr8 (354-410)||(13421456-13421512)
chr8 (359-410)||(25485432-25485483)
chr8 (354-408)||(3075147-3075201)
chr8 (348-410)||(10216141-10216203)
chr8 (354-412)||(22935978-22936036)
chr8 (356-410)||(29636392-29636446)
chr8 (361-410)||(13573784-13573833)
chr8 (332-412)||(14364464-14364545)
chr8 (352-408)||(17734919-17734975)
chr8 (361-410)||(21304639-21304687)
chr8 (357-410)||(37266148-37266201)
chr8 (358-411)||(37837582-37837635)
chr8 (349-410)||(40791761-40791822)
chr8 (348-410)||(253535-253594)
chr8 (348-410)||(662264-662323)
chr8 (348-410)||(848062-848121)
chr8 (348-408)||(6292523-6292583)
chr8 (354-410)||(8628057-8628113)
chr8 (354-410)||(14094156-14094212)
chr8 (358-410)||(25598463-25598515)
chr8 (327-411)||(29726392-29726476)
chr8 (348-408)||(30990807-30990867)
chr8 (352-408)||(33969567-33969623)
chr8 (354-410)||(34678610-34678666)
chr8 (354-410)||(34923857-34923912)
chr8 (362-410)||(35366335-35366383)
chr8 (358-406)||(37304902-37304950)
chr8 (356-408)||(37836936-37836988)
chr8 (348-410)||(17496270-17496330)
chr8 (327-410)||(34925411-34925494)
chr8 (359-414)||(37265513-37265568)
chr8 (349-408)||(37872875-37872933)
chr8 (359-414)||(40298939-40298994)
chr8 (361-408)||(41312388-41312435)
chr8 (354-408)||(4256574-4256628)
chr8 (354-412)||(8297114-8297172)
chr8 (348-410)||(11140103-11140165)
chr8 (356-410)||(17565344-17565398)
chr8 (364-410)||(31740155-31740200)
chr8 (356-410)||(31846464-31846518)
chr8 (356-414)||(43776997-43777055)
chr8 (354-410)||(5872743-5872799)
chr8 (357-414)||(6099356-6099413)
chr8 (357-410)||(29459264-29459317)
chr8 (363-408)||(44746198-44746243)
chr8 (358-410)||(3075972-3076024)
chr8 (355-411)||(8443330-8443386)
chr8 (366-406)||(44146679-44146719)
[»] scaffold0003 (3 HSPs)
scaffold0003 (354-410)||(421160-421216)
scaffold0003 (354-411)||(421934-421991)
scaffold0003 (348-411)||(14056-14119)
[»] scaffold2113 (1 HSPs)
scaffold2113 (348-410)||(733-795)
[»] scaffold0289 (2 HSPs)
scaffold0289 (348-410)||(3415-3477)
scaffold0289 (354-411)||(4052-4109)
[»] scaffold0460 (2 HSPs)
scaffold0460 (348-412)||(13463-13527)
scaffold0460 (354-412)||(13574-13632)
[»] scaffold0102 (2 HSPs)
scaffold0102 (348-411)||(27007-27070)
scaffold0102 (327-410)||(26344-26421)
[»] scaffold0068 (2 HSPs)
scaffold0068 (358-409)||(26484-26535)
scaffold0068 (361-410)||(59280-59329)
[»] scaffold0368 (2 HSPs)
scaffold0368 (354-408)||(10606-10660)
scaffold0368 (348-410)||(11263-11325)
[»] scaffold0189 (1 HSPs)
scaffold0189 (356-410)||(11304-11358)
[»] scaffold0105 (1 HSPs)
scaffold0105 (348-410)||(19652-19714)
[»] scaffold1192 (1 HSPs)
scaffold1192 (348-411)||(167-230)
[»] scaffold0098 (1 HSPs)
scaffold0098 (348-411)||(34319-34382)
[»] scaffold0361 (2 HSPs)
scaffold0361 (369-410)||(17154-17195)
scaffold0361 (348-410)||(16492-16554)
[»] scaffold0695 (1 HSPs)
scaffold0695 (354-410)||(2236-2292)
[»] scaffold0067 (1 HSPs)
scaffold0067 (348-412)||(18746-18810)
[»] scaffold0051 (2 HSPs)
scaffold0051 (354-410)||(11635-11691)
scaffold0051 (354-410)||(10981-11037)
[»] scaffold0201 (2 HSPs)
scaffold0201 (361-408)||(16002-16049)
scaffold0201 (348-406)||(15338-15396)
[»] scaffold0115 (2 HSPs)
scaffold0115 (348-410)||(31359-31421)
scaffold0115 (354-412)||(33348-33406)
[»] scaffold0004 (2 HSPs)
scaffold0004 (361-411)||(351288-351338)
scaffold0004 (354-412)||(351940-351998)


Alignment Details
Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 29735975 - 29736070
Alignment:
Q  224 attgtgaatgtaggttcgtgaagaaagggatcaaatgaaatgaatgttttgcaaggtttgggaattttctacgtttcgctttcatggaaaagagtc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  29735975 attgtgaatgtaggttcgtgaagaaagggatcaaatgaaatgaatgttttgcaaggtttgggaattttctacgtttcgctttcaggaaaaagagtc 29736070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 200
Target Start/End: Original strand, 29735788 - 29735952
Alignment:
Q  28 tggtaagtaatactactctgaaacatcctaatataagatttgatctcattgacgttaaatgaaaatcgtgtagcgtttcaggcaaatccattatagaaag 127  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||||  || ||||||||||||| |||| ||||||||  |||||||||||||| |     
T  29735788 tggtaagtaatactactctaaaacatcataatataagacttgatctcataaacattaaatgaaaatcatgtaacgtttcagaaaaatccattatagataa 29735887  T
Q  128 nnnnnnnnnnnnnngatgacagaaattgaaatttcatgtccttgtcgacatggctaagaaaaaacttgtatac 200  Q
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29735888 aaaaaaa--------atgacagaaattgaaatttcatgtccttgtcgacatggctaagaaaaaacttgtatac 29735952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 20261645 - 20261587
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  20261645 catcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacact 20261587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 2935845 - 2935765
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||  ||||| | |||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  2935845 gagtaaattacactcccctccccttccctcaaagatgcttgaattacactcccttcccctcttatgttaaaatatacactt 2935765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 27619718 - 27619639
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  ||||| | |||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  27619718 gagtaaattacactctcctccccttccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 27619639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 29732530 - 29732422
Alignment:
Q  17 aaaaattggattggtaagtaatact---actctgaaacatcctaatataagatttgatctcattgacgttaaatgaaaatcgtgtagcgtttcaggcaaa 113  Q
    |||| ||||||||||||||||||||   ||||| |||| |||||||||||||  ||||||||   || ||||||||||||||||||| ||||| | ||||    
T  29732530 aaaatttggattggtaagtaatactgctactcttaaacttcctaatataagacctgatctcagaaacattaaatgaaaatcgtgtagtgtttcggacaaa 29732431  T
Q  114 tccattata 122  Q
    |||||||||    
T  29732430 tccattata 29732422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 40400917 - 40400971
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  40400917 ccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacact 40400971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 42813638 - 42813580
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  42813638 ccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacactttcc 42813580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 29823338 - 29823399
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  29823338 tcccctcccctcaaagatgtttgaattacactctcctcccctcttaagttaaaatatacact 29823399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 22264519 - 22264444
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||     |||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  22264519 tttgagtaaattacactca-----catcgcctcaaagatgcttgaataacactctcatcccctcttatgttaaaatataca 22264444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 40344504 - 40344440
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| ||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  40344504 ctcccttcctcttaaagatgtttgaattacactctcctcccctcttatgttaaaatatacacttt 40344440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 435
Target Start/End: Original strand, 29736119 - 29736226
Alignment:
Q  329 ttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcca-tcttgaaaagta 427  Q
    ||||||||||||||||  |||||| ||| || ||||||| |||||||||||||   | | |||||||||||||||||||| ||||||  |||||||||||    
T  29736119 ttgagtaaattacacttctctcccctcctcttaaagatgcttgaattacactccacttccctcttatgttaaaatatacattttccacccttgaaaagta 29736218  T
Q  428 taatctac 435  Q
     |||||||    
T  29736219 aaatctac 29736226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 30738206 - 30738257
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  30738206 cctcaaagatgcttgaattacactctcatcctctcttatgttaaaatttaca 30738257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 6184659 - 6184720
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  6184659 ctcccctcccctcaaagatgtttgaattacactctcctcc-ctcttaagttaaaatatacact 6184720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 11639903 - 11639965
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  11639903 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 11639965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 14078363 - 14078425
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| |||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  14078363 ctcccatgccctcaaagatgcttgaattaaactctcttcccctcttatgttaaaatatacact 14078425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 14388391 - 14388453
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| |||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  14388391 ctcccatgccctcaaagatgcttgaattaaactctcttcccctcttatgttaaaatatacact 14388453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 36688942 - 36688861
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||| ||||||     || |||||| |||||||||||||| | ||| ||||||||||||||||||||||||||    
T  36688942 tttgagtaaattacactcctctccc-----cttaaagatctttgaattacactcccctcccctcttatgttaaaatatacactttcc 36688861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 38790080 - 38790141
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  38790080 tcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 38790141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 26006 - 25950
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  26006 ccctcaaagatgtttgaattacactcacctcccctcttaagttaaaatatacacttt 25950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 318025 - 317961
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  318025 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 317961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 6185400 - 6185336
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  6185400 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 6185336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 6191916 - 6191852
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  6191916 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 6191852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 25606931 - 25606995
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  25606931 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 25606995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 29615531 - 29615583
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  29615531 ccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatataca 29615583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 29824097 - 29824033
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  29824097 ctcccctcccttcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacacttt 29824033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 8122634 - 8122697
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||| | |  ||||||||||||||||||||||||    
T  8122634 ctcccctcccctcaaagatgcttgaattacactccccttatctcttatgttaaaatatacactt 8122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 22263770 - 22263833
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||| |||||||||| |||||||||| |||  |||||||||||||||||||||||||||    
T  22263770 ctcccctcctctcaaagatgcttgaattacattcttctcctctcttatgttaaaatatacactt 22263833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 48981886 - 48981941
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||||    
T  48981886 tcccctcaaagatgcttgaattacactcccatcccctcttatgtcaaaatatacac 48981941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 317285 - 317347
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  317285 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 317347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 3341500 - 3341446
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||    
T  3341500 ccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatatacact 3341446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 5228706 - 5228644
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||||| ||| || |||||||||||||||||||    
T  5228706 ctcccctcccttcaaagatgcttgaattacactctcctccccttttatgttaaaatatacact 5228644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 5951668 - 5951722
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||||||    
T  5951668 ctcaaagatgtttgaatttcactaccctcctctcttatgttaaaatatacacttt 5951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 19156134 - 19156080
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  19156134 cctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatacactt 19156080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 20755533 - 20755479
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  20755533 cctcaaagatgtttgaattacactcatctcccctcttatgttaaaatatacactt 20755479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 22711649 - 22711703
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||| |||||||||| ||| ||||||||||||||||||||||    
T  22711649 ccctcaaagatgcttgatttacactctcctcccctcttatgttaaaatatacact 22711703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 27144188 - 27144250
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| || |||||||||| | ||| ||||||||||||||||||||||    
T  27144188 ctcccctcccctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacact 27144250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 42813028 - 42813090
Alignment:
Q  347 tctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    ||||||||| ||||||||||| |||||||||||| || | | |||||||||||||||||||||    
T  42813028 tctcccatctcctcaaagatgcttgaattacactttccttccctcttatgttaaaatatacac 42813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 414
Target Start/End: Original strand, 11696237 - 11696282
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||    
T  11696237 ttgaattacactctcatcctttcttatgttaaaagatacactttcc 11696282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 28308725 - 28308676
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  28308725 aaagatgcttgaattacactctcatctcctcttatgttaaaatatacact 28308676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 25269 - 25325
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  25269 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 25325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 2146942 - 2146878
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||||    
T  2146942 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacacttt 2146878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 38670002 - 38670066
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| || ||| ||||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  38670002 ctcccctctccttaaagatgcttgaattacactctcctcccctcttaagttaaaatatacacttt 38670066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 40401613 - 40401557
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  40401613 tcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 40401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 46011181 - 46011125
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | | ||||||||||||||||||| ||||    
T  46011181 tcccctcaaagatgcttgaattacactccccttctctcttatgttaaaatatgcact 46011125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 2790096 - 2790147
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||||||||| | ||| |||||| |||||||||||||    
T  2790096 cctcaaagatgtttgaattacactcccctcccctcttaagttaaaatataca 2790147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 6931962 - 6931923
Alignment:
Q  83 taaatgaaaatcgtgtagcgtttcaggcaaatccattata 122  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6931962 taaaagaaaatcgtgtagcgtttcaggcaaatccattata 6931923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 8535517 - 8535443
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||||||     || |||| ||||||||||||||||||||||| | ||| || |||||||||||||||    
T  8535517 atttgagtaaattacactc-----ccctcccgtcaaagatgtttgaattacactcccctccccttttatgttaaaatata 8535443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 10412615 - 10412560
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||| ||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  10412615 cccttaaatatgcttgaattacactctcctcccctcttatgttaaaatatacactt 10412560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 16425344 - 16425407
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||| ||||||| |||||||||||||||   ||| |||||||||||||||||||||||    
T  16425344 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttatgttaaaatatacactt 16425407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 409
Target Start/End: Complemental strand, 38790802 - 38790747
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||||||||||||||||| | ||  ||||||| |||||||||||||    
T  38790802 tcccctcaaagatgtttgaattacactcccctctcctcttatattaaaatatacac 38790747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 2146043 - 2146105
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  2146043 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 2146105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 19435353 - 19435299
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||||||||||||||   ||| ||||||||||| ||||||||||||    
T  19435353 ctcaaagatgtttgaattacactcctctccactcttatgttataatatacacttt 19435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 25607671 - 25607617
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||||||||||||||| | ||| |||||| |||||||||||||||    
T  25607671 cccttaaagatgtttgaattacactcccctcccctcttaagttaaaatatacact 25607617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 32388206 - 32388152
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||| |||||||||||||   ||| |||||||||||||||||||||||    
T  32388206 cctcaaagatgcttgaattacactccactcccctcttatgttaaaatatacactt 32388152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 32867251 - 32867313
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  32867251 ctcccctcccttcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacact 32867313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 36848565 - 36848499
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| || ||| ||||||| ||||||||||||||  ||  ||||||||||||||||||||||||||    
T  36848565 ctcccctctccttaaagatgcttgaattacactcttctctcctcttatgttaaaatatacactttcc 36848499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 38670751 - 38670689
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| || ||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  38670751 ctcccctctcctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 38670689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 32867961 - 32867908
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  32867961 cctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacact 32867908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 43450109 - 43450166
Alignment:
Q  351 ccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||| ||||||||| ||||||||||||  | || |||||||||||||||||||||    
T  43450109 ccatcccttcaaagatgcttgaattacacttccctcatctcttatgttaaaatataca 43450166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 13904512 - 13904437
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||| |||||     ||||||||||||||||||||||  |  | | ||||||||||||||||||||    
T  13904512 gagtaaattacactcatcttccatc-----aaagatgtttgaattacactctgcttttatattatgttaaaatatacactt 13904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 23742726 - 23742666
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||| |||||| |||||||||||||   || |||||||||||||||||||||    
T  23742726 ctcccctcccctctaagatgcttgaattacactcatctcatctcttatgttaaaatataca 23742666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 34999198 - 34999254
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||||  ||||||||||||| | ||| ||||||||||||||||||||||    
T  34999198 tcccctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacact 34999254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 38987769 - 38987821
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| |||||||| |||| | ||| ||||||||||||||||||||||    
T  38987769 ctcaaagatgcttgaattaaactcccctcccctcttatgttaaaatatacact 38987821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 40343771 - 40343827
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||    
T  40343771 tcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacact 40343827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 45941469 - 45941517
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||||||||||  |  |||||||||||||||||||||    
T  45941469 ctcaaagatgtttgaattacacttcccgcctctcttatgttaaaatata 45941517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 3340780 - 3340843
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| |||||||||| |  | | | |||||||||||||||||||||||    
T  3340780 ctcccctcccctcaaagatgcttgaattacatttcccttccctcttatgttaaaatatacactt 3340843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 412
Target Start/End: Complemental strand, 29736737 - 29736694
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||    
T  29736737 ttgaattacattctcatcccctcttatgttaaaatctacacttt 29736694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 30869926 - 30869981
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||| || ||||||||||   ||| ||||||||||||||||||||||||||    
T  30869926 tcaaagatgcttaaattacactcatctcccctcttatgttaaaatatacactttcc 30869981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 31221512 - 31221461
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||||| | |||  |||||||||||||||||||||    
T  31221512 tcaaagatgcttgaattacactcccctcccttcttatgttaaaatatacact 31221461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 11641041 - 11640983
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| || |||||||||| | ||| || ||||||||| |||||||||||    
T  11641041 tcccctcaaagatggttaaattacactcccctccccttttatgttaatatatacacttt 11640983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 12677130 - 12677168
Alignment:
Q  372 aattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  12677130 aattacactctcctcccctcttatgttaaaatatacact 12677168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 410
Target Start/End: Complemental strand, 13068470 - 13068412
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  || |||||||||  | |||| |||||||||||||||||||||    
T  13068470 catcccctcaaagatccttaaattacacttccctcctttcttatgttaaaatatacact 13068412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 20261020 - 20261074
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||| | ||||||||||  | ||| |||||||||||||||||||||||    
T  20261020 cctcaaagatgctggaattacacttccctcccctcttatgttaaaatatacactt 20261074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 20261679 - 20261641
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcc 387  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  20261679 tcccctcccctcaaagatgcttgaattacactctcatcc 20261641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 23742013 - 23742067
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||||||||   || ||||||||||||||||||    
T  23742013 ccctgaaagatgcttgaattacactctcatctcttcctatgttaaaatatacact 23742067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 24679946 - 24679893
Alignment:
Q  357 cctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  24679946 cctcaaagatgtttgaattacatttctc-tcccctcttatgttaaaatatacact 24679893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 28308014 - 28308068
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||| ||||||||||||| | ||  |||||||||||||||||| |||||    
T  28308014 ctcaaagatgcttgaattacactcccctctcctcttatgttaaaatatatacttt 28308068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 29732408 - 29732362
Alignment:
Q  145 gacagaaattgaaatttcatgtccttgtcgacatggctaagaaaaaa 191  Q
    |||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  29732408 gacataaattgaaatttcatgtccttatcgatatgtctaagaaaaaa 29732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 29736846 - 29736796
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||| ||| ||||||||||| || ||||||||||||||||||||||    
T  29736846 aaagaagttagaactacactctcattctttcttatgttaaaatatacactt 29736796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 36687311 - 36687365
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  36687311 cccttaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 36687365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 36847839 - 36847901
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||   | | ||| ||||||||||||||||||||||    
T  36847839 ctcccctcccctcaaagatgcttgaattacgaccccctcccctcttatgttaaaatatacact 36847901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 48982606 - 48982544
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| || ||||||| ||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  48982606 ctcccctctcctcaaatatgcttgaattacacttccctcccctcttatgttaaaatatacact 48982544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 19333107 - 19333038
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagta 427  Q
    ||||||||| |||||||||||||   |||||| ||| ||||||||||||||| |||  ||||||||||||    
T  19333107 tcaaagatgcttgaattacactcctctcctcttttaagttaaaatatacactctcctttcttgaaaagta 19333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 406
Target Start/End: Complemental strand, 29616268 - 29616227
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||| ||||||||||| |||| ||||||||||    
T  29616268 atgtttgaattacaatctcatcctcttttatattaaaatata 29616227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 30870629 - 30870584
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||| ||| |||| ||||| |||||||||||||||    
T  30870629 atgtttgaattacacgctcctcctttcttaggttaaaatatacact 30870584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 33869221 - 33869262
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  33869221 ttgaattacactctcctctcctcttatgttaaaatatacact 33869262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 33869319 - 33869364
Alignment:
Q  367 gtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||| || |||||||| ||||||||||||||| ||||||||    
T  33869319 gtttgaatttcattctcatcccctcttatgttaaaatctacacttt 33869364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 34835536 - 34835487
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||| ||||||||||| || | || |||||||||||||||||||||    
T  34835536 tcaaagatttttgaattacattcccctcttctcttatgttaaaatataca 34835487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 48872021 - 48872080
Alignment:
Q  354 tcccctcaaagatgtttgaa---ttacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||   ||||| || | ||||||||||||||||||||||||||    
T  48872021 tcccctcaaagatgcttgaagaattacattcccctcctctcttatgttaaaatatacact 48872080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 1573085 - 1573145
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||| || || ||| ||||||||||||| | ||| ||||||||||||||||||||    
T  1573085 ctcccttcccatctaaaatgcttgaattacactcccctcccctcttatgttaaaatataca 1573145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 12677802 - 12677750
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||| |||||||||| ||| |||||||| ||  ||||||||||||||||||||    
T  12677802 ccctgaaagatgtttaaatgacactctcgtcacctcttatgttaaaatataca 12677750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 12679697 - 12679645
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||| |||||||||| ||| |||||||| ||  ||||||||||||||||||||    
T  12679697 ccctgaaagatgtttaaatgacactctcgtcacctcttatgttaaaatataca 12679645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 31220805 - 31220865
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||| ||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  31220805 ctcccctcccttcaaagatgcttgaattacactcttctcccttcttatattaaaatataca 31220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 32867867 - 32867803
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||| | ||| | |||||||||| || | ||||||||||||||||||| ||||||||    
T  32867867 ctcccctcccctaagagaagcttgaattacattcccctcctctcttatgttaaaatctacacttt 32867803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 8e-28; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 32929959 - 32930038
Alignment:
Q  238 ttcgtgaagaaagggatcaaa-tgaaatgaatgttttgcaaggtttgggaattttctacgtttcgctttcatggaaaaga 316  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32929959 ttcgtgaagaaagggatcaaaatgaaatgaatgttttgcaaggtttgggaattttctacgtttcgctttcaggaaaaaga 32930038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 38720679 - 38720621
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38720679 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 38720621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 19313352 - 19313414
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  19313352 ctcccctcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacact 19313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 13395179 - 13395259
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||||||    
T  13395179 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactt 13395259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 13772437 - 13772389
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13772437 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 13772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 754858 - 754937
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  754858 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacact 754937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 13771725 - 13771787
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  13771725 ctcccctcccctcaaagatgcttgaattacactttcatcccctcttatgttaaaatatacact 13771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 56310146 - 56310073
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||||||||| |     |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  56310146 gagtaaattacactcatctctc-----ctcaaagatgcttgaattacactctcctcctctcttatgttaaaatatacac 56310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 13482175 - 13482252
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||    |||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  13482175 tttgagtaaattacact----tccc-tcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 13482252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 30192527 - 30192579
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  30192527 tcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacactt 30192579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 41919970 - 41919914
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  41919970 tcccctcaaagatgcttgaattacactcttctcctctcttatgttaaaatatacact 41919914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 23265846 - 23265788
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  23265846 tcccctcaaagatgcttgaattacactctcttcccctcttaagttaaaatatacacttt 23265788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 26705737 - 26705675
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  26705737 ctcccttcccttcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 26705675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 35667634 - 35667572
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||| || ||| ||||||||||||||||||||||    
T  35667634 ctcccctcccctcaaagatgcttgaattacactttcctcccctcttatgttaaaatatacact 35667572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 47030550 - 47030488
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||    
T  47030550 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 47030488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 46095414 - 46095475
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||    
T  46095414 tcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 46095475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 616193 - 616137
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||    
T  616193 tcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacact 616137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 7165403 - 7165467
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  7165403 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 7165467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 12250681 - 12250745
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  12250681 ctcccttcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 12250745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 13392819 - 13392755
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  13392819 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 13392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 13395958 - 13395894
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  13395958 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 13395894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 23722113 - 23722057
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  23722113 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 23722057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 25010119 - 25010063
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  25010119 tcccttcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 25010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 47029824 - 47029888
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  47029824 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 47029888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 55815059 - 55815003
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  55815059 tcccatcaaagatgcttgaattacactctcctcctctcttacgttaaaatatacact 55815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 721313 - 721392
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||    |||| |||||||||||||| ||||||||||||| | ||| ||||||| |||||||||||||||    
T  721313 atttgagtaaattacact----tccc-tcccctcaaagatgcttgaattacactcccctcccctcttatattaaaatatacactt 721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 4949956 - 4950003
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  4949956 agatgtttgaattacactcccctcctctcttatgttaaaatatacact 4950003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 7479414 - 7479351
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||||||||||| || |||||| ||||| |||||| |||||||||||||||||||||||    
T  7479414 ctcccctcccctcaaagttgcttgaatcacactttcatcccctcttatgttaaaatatacactt 7479351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 10155510 - 10155573
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||||||||||||||||||| |||  | ||| ||||||||||||||||    
T  10155510 ctcccctcccctcaaagatgtttgaattacactctcctccctttttaagttaaaatatacactt 10155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 35667449 - 35667386
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||    
T  35667449 ctcccttcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactt 35667386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 35667817 - 35667762
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  35667817 cccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 35667762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 7166146 - 7166084
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||  | |||||||||| |||||||||||||||    
T  7166146 ctcccctcccctcaaagatgcttgaattacacttccctcctctcttaagttaaaatatacact 7166084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 8193058 - 8192996
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  8193058 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 8192996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 17730248 - 17730186
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||| ||  || |||||||||||||||||||    
T  17730248 ctcccctcccctcaaagatgcttgaattacactctcctctccttttatgttaaaatatacact 17730186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 23308813 - 23308871
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||||    
T  23308813 ccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactttcc 23308871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 35667351 - 35667289
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  35667351 ctcccctcccatcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 35667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 55068850 - 55068912
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  55068850 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 55068912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 6711239 - 6711300
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||||||||| ||||||||||||  | ||| ||||| |||||||||||||||    
T  6711239 ctcccatcccctcaaagatgcttgaattacacttccctcccctcttgtgttaaaatatacac 6711300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 16192370 - 16192321
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  16192370 aaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 16192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 18362780 - 18362703
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||    |||| |||||||||||||| ||||||||||||||| | | ||||||| ||||||||||||||    
T  18362780 tttgagtaaattacact----tccc-tcccctcaaagatgcttgaattacactctcctaccctcttatattaaaatatacact 18362703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 414
Target Start/End: Original strand, 21037326 - 21037371
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  21037326 ttgaattacactcccctcctctcttatgttaaaatatacactttcc 21037371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 28464214 - 28464271
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||    
T  28464214 tcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactt 28464271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 33047296 - 33047235
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||| |||| |||||||||||||||| | ||| ||||||||||||||||||||||    
T  33047296 tcccctccccttaaagttgtttgaattacactcccctcccctcttatgttaaaatatacact 33047235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 36600146 - 36600223
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||    |||| |||||||||||||| ||||||||||||||| | | ||||||| ||||||||||||||    
T  36600146 tttgagtaaattacact----tccc-tcccctcaaagatgcttgaattacactctcctaccctcttatattaaaatatacact 36600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 48372407 - 48372480
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||||||||||||||||   |||  ||||||||||||||||||||||||| || | ||| ||||||||||||||||||    
T  48372407 tttgagtaaattacactc---tcc--tcccctcaaagatgtttgaattacattcgcctcccctcttatgttaaaatata 48372480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 51019664 - 51019721
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| | ||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  51019664 tcccctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacactt 51019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 19314075 - 19314019
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | |||  |||||||||||||||||||||    
T  19314075 tcccctcaaagatgcttgaattacactcccctcccgtcttatgttaaaatatacact 19314019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 20545086 - 20545026
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||| ||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  20545086 ctcccctcccctcagagatgcttgaattacactcccctcccctcttatgttaaaatataca 20545026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 403
Target Start/End: Complemental strand, 28464870 - 28464822
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaat 403  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  28464870 cccctcaaaaatgtttgaattacaatctcatcccctcttatgttaaaat 28464822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 29429752 - 29429704
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  29429752 agatgcttgaattacactctccttctctcttatgttaaaatatacactt 29429704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 46096187 - 46096123
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  46096187 ctcccctcccttcaaagatgcttgaattacactcccttcccctcttaagttaaaatatacacttt 46096123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 46138688 - 46138624
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  46138688 ctcccctcccttcaaagatgcttgaattacactcccttcccctcttaagttaaaatatacacttt 46138624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 56309435 - 56309483
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  56309435 aagatgtttgaattacactttcatcccctcttatgttaaaatacacact 56309483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 508026 - 507987
Alignment:
Q  83 taaatgaaaatcgtgtagcgtttcaggcaaatccattata 122  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  508026 taaaagaaaatcgtgtagcgtttcaggcaaatccattata 507987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 755610 - 755531
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||    |||| |||||||||||||| |||||||| |||| | ||| ||||||| |||||||||||||||    
T  755610 atttgagtaaattacact----tccc-tcccctcaaagatgcttgaattatactcccctcccctcttatattaaaatatacactt 755531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 7480047 - 7479968
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttccatcttgaaaagta 427  Q
    ||||| ||||||||||| || |||||| ||||| ||||||  |||||||||||||||||||||| |   |||||||||||    
T  7480047 ctcccctcccctcaaagttgcttgaatcacactttcatcccttcttatgttaaaatatacacttcctcccttgaaaagta 7479968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 7797681 - 7797618
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| |||||||||| || | |||  ||||||||||||||||||||||    
T  7797681 ctcccctcccctcaaagatgcttgaattacattcccctcccttcttatgttaaaatatacactt 7797618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 23309537 - 23309482
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  23309537 cctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 23309482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 54096772 - 54096721
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||| ||| || |||||||||||||||||||    
T  54096772 tcaaagatgtttgagttacactctcctccccttttatgttaaaatatacact 54096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 615447 - 615505
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||||    
T  615447 tcccctcaaagatgcttgaattacactccccttcactcttaagttaaaatatacacttt 615505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 722047 - 721985
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  |||||||||||||   ||| ||||||||||||||||||||||    
T  722047 ctcccctcccctcaaagatacttgaattacactcctctcccctcttatgttaaaatatacact 721985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 796390 - 796452
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  796390 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 796452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 6232357 - 6232415
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| ||||||||||||||||||    
T  6232357 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatata 6232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 6232434 - 6232492
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||  |||||| |||||||||||||||||    
T  6232434 tcccctcaaagatgcttgaattacactcccctctcctcttaagttaaaatatacacttt 6232492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 6233171 - 6233109
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  ||||||||||||| | ||| |||||| |||||||||||||||    
T  6233171 ctcccctcccctcaaagatacttgaattacactcccctcccctcttaagttaaaatatacact 6233109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 17722757 - 17722819
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| | ||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  17722757 ctcccctccctttaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 17722819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 23269175 - 23269237
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  23269175 ctcccctcccttcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 23269237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 35665965 - 35666022
Alignment:
Q  354 tcccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| |||||||| ||| ||| |||||||||||||||||||||||||||    
T  35665965 tcccctcaaagatgcttgaattatacttctc-tcctctcttatgttaaaatatacactt 35666022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 37423795 - 37423849
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| || |||||||||| | ||| ||||||||||||||||||||||    
T  37423795 ccctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacact 37423849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 6233848 - 6233792
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctca-tcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  6233848 tcccctcaaagatgtttgaattacactcccattcctttc-tatgttaaaatatacact 6233792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 7796940 - 7797016
Alignment:
Q  330 tgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||||  ||     ||||||| ||||||||||||| | ||| ||| |||||||||||||||||||    
T  7796940 tgagtaaattacactcatctcctttc-----aaagatgcttgaattacactcccctcccctcctatgttaaaatatacactt 7797016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 37708791 - 37708844
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  37708791 cctcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacact 37708844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 50824644 - 50824697
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| |||||||||||||   | ||||||||||||||||||||||||    
T  50824644 cctcaaagatgcttgaattacactccacttctctcttatgttaaaatatacact 50824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 23721393 - 23721452
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||||||||||| | | ||| || ||||||||||||||||| |||||    
T  23721393 tcccctcaaagatgtttgaattacac-cccctccccttttatgttaaaatatacattttcc 23721452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 36687267 - 36687322
Alignment:
Q  356 ccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||||||||| ||||    
T  36687267 ccctcaaagatgcttgaattacacttctc-tcctctcttatgttaaaatatatactt 36687322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 37423156 - 37423216
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||| ||||||||||||| | |||  |||||||||||||||| || |||||    
T  37423156 tcccctcaaagatgcttgaattacactcccctccattcttatgttaaaatatgcagtttcc 37423216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 4950679 - 4950601
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||     || |||||||||||||| |||||| |||||| | ||   |||||||||||||||||||||    
T  4950679 atttgagtaaattacactc-----ccctcccctcaaagatgcttgaatcacactcccctctcttcttatgttaaaatatacact 4950601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 411
Target Start/End: Complemental strand, 13482847 - 13482804
Alignment:
Q  368 tttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| | |||||||||||||| ||||||||||||    
T  13482847 tttgaattacactcccctcctctcttatgtttaaatatacactt 13482804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 16960223 - 16960274
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  16960223 tcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 16960274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 26809106 - 26809051
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||||||||| | ||   ||| ||||||||||||||||||    
T  26809106 ccctcaaagatgtttgaattacactcccctcacatctcatgttaaaatatacactt 26809051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 33046573 - 33046631
Alignment:
Q  354 tcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||| |||| ||| ||||||||||||||| ||||||||    
T  33046573 tcccctcaaagatgattgaattacacttctc-tcccctcttatgttaaaatctacacttt 33046631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 37424503 - 37424452
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  37424503 tcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacact 37424452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 32448999 - 32448945
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||  |||||||||||||   ||| |||||||||||||||||||||||    
T  32448999 cctcaaagatacttgaattacactccactcccctcttatgttaaaatatacactt 32448945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 36898167 - 36898105
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  ||||||||||||| | ||  || |||||||||||||||||||    
T  36898167 ctcccctcccctcaaagatacttgaattacactcccctctccttttatgttaaaatatacact 36898105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 408
Target Start/End: Original strand, 45847156 - 45847202
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  45847156 aagatgtttgaattacacttccctcccctcttatgttaaaatataca 45847202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 47931298 - 47931236
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| |||||| | |||||||||||||||   ||| ||||||||||||||||||||||    
T  47931298 ctcccctcctctcaaataagtttgaattacactcatctcccctcttatgttaaaatatacact 47931236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 7851722 - 7851783
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    ||||| |||||||||||| | || ||||||||| |||||| || ||| ||||||||||||||    
T  7851722 ctcccctcccctcaaagaagctttaattacactttcatcccctattaagttaaaatatacac 7851783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 33032173 - 33032229
Alignment:
Q  354 tcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||| |||| ||| || |||||||||||||||||||    
T  33032173 tcccctcaaagatgcttgaattacacttctc-tcccctattatgttaaaatatacact 33032229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 33032883 - 33032831
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatat 405  Q
    ||||| |||||||||||||| |||||||||||||||     |||||||||||||||||    
T  33032883 ctcccctcccctcaaagatgcttgaattacactctc-----ctcttatgttaaaatat 33032831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 36651320 - 36651271
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||||||||||| | |||| | |||||||||| ||||||||||||    
T  36651320 atgtttgaattacactcccctccttttttatgttaaagtatacactttcc 36651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 44664713 - 44664773
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||| |||||||| |||||||||||| |||| ||| ||||||||||||||||||||    
T  44664713 ctcccctcccatcaaagatatttgaattacacttctc-tcccctcttatgttaaaatataca 44664773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 45847822 - 45847773
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| |||||||||| ||   ||||||||||||||||||||||||||    
T  45847822 aaagatgcttgaattacaatcctctcctctcttatgttaaaatatacact 45847773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 46076377 - 46076418
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  46076377 ttgaattagactctcatccactctcatgttaaaatatacact 46076418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 7478688 - 7478737
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||||||||   |||||||  |||||||||||||||    
T  7478688 cctcaaagatgtttgaattacactcctctcctctc--atgttaaaatataca 7478737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 16960936 - 16960880
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||  |||||||| |||| | ||  ||||||||||||||||||||||    
T  16960936 tcccctcaaagattcttgaattatactcccctctcctcttatgttaaaatatacact 16960880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 17202004 - 17201949
Alignment:
Q  356 ccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| ||||||||||| |||| ||| ||||||||||||||| |||||||    
T  17202004 ccctcaaagatgcttgaattacacttctc-tccactcttatgttaaaatctacactt 17201949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 29979071 - 29979151
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagtataatctac 435  Q
    |||||||||||| |||||||||| || | |   |||| ||||||||||||||||| |||  |||||||||||| |||||||    
T  29979071 ccctcaaagatgcttgaattacattcccctttgctctaatgttaaaatatacactctcctctcttgaaaagtaaaatctac 29979151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 36687938 - 36687883
Alignment:
Q  356 ccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| ||||||||||| |||| |||| ||||||||||||||||| ||||    
T  36687938 ccctcaaagatgcttgaattacacttctc-tcctatcttatgttaaaatatatactt 36687883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 37709628 - 37709576
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||| |||||||||| || | ||| |||| |||||||||||||    
T  37709628 tcccctcaaagatgcttgaattacattcccctcccctctcatgttaaaatata 37709576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 37735536 - 37735484
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||| |||||||| | |||||||  ||||||| |||||||||||||||    
T  37735536 tcaaagatgcttgaattatattctcatctcctcttatattaaaatatacactt 37735484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 44665247 - 44665191
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| || ||||||||| ||| | ||| || |||||||||||||||||||    
T  44665247 tcccctcaaagttgcttgaattacgctcccctccccttttatgttaaaatatacact 44665191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 55140071 - 55140016
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| |||||||||||||||||  |||  ||||||||||||||||| ||||    
T  55140071 tcccctcaaa-atgtttgaattacactcatatctcctcttatgttaaaatatgcact 55140016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 44645275 - 44645333
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44645275 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 44645333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 27226410 - 27226333
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||    
T  27226410 gagtaaattacactcctctcccctcccctcaaaaatgtttgaattacactcccctctcctcttatgttaaaatataca 27226333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 19072438 - 19072364
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  19072438 gagtaaattacactcatctccc-----ctcaaagatgtttgaattacactcccctcctctcttatattaaaatatacact 19072364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 19120328 - 19120254
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  19120328 gagtaaattacactcatctccc-----ctcaaagatgtttgaattacactcccctcctctcttatattaaaatatacact 19120254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 45738006 - 45738069
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  45738006 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacactt 45738069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 49129018 - 49129073
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  49129018 cccctcaaagatgtttgaattacactctcatcccttcttatgttaaaatatacact 49129073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 19071726 - 19071780
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19071726 ccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacact 19071780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 19119616 - 19119670
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  19119616 ccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatatacact 19119670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 50144135 - 50144057
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||   |||  |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  50144135 atttgagtaaattacactc---tcc--tcccctcaaagatacttgaattacactctcatcccctcttatgttaaaatatacact 50144057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 18407269 - 18407209
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18407269 ctcccctccccttaaagatgtttgaattacactctcctcccctcttatgttaaaatataca 18407209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 36605462 - 36605406
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  36605462 tcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacact 36605406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 8061040 - 8061094
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  8061040 cccttaaagatgcttgaattacactctcctcctctcttatgttaaaatatacact 8061094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 16536378 - 16536440
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  16536378 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 16536440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 41321519 - 41321581
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||    
T  41321519 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 41321581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 25068338 - 25068395
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  25068338 cccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacacttt 25068395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 4601765 - 4601709
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||||| | | ||||||||||||||||||||||    
T  4601765 tcccctcaaagatgcttgaattacactctccttccctcttatgttaaaatatacact 4601709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 44648632 - 44648692
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| |||||||| |||| |||||||||||||  ||||||||||||||||||||||||||    
T  44648632 tccccacaaagatgcttgatttacactctcatctcctcttatgttaaaatatacactttcc 44648692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 45737317 - 45737373
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  45737317 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 45737373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 16537102 - 16537022
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||| ||||||      ||||||||| ||||||||||||  | ||| ||||||||||||||||||||||||||    
T  16537102 tttgagtaaattacactcctctccc------tcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactttcc 16537022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 12126601 - 12126547
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||| |||||| |||||| || |||||||||||||||||||||||||||    
T  12126601 cctcaaagatatttgaaatacactatcctcctctcttatgttaaaatatacactt 12126547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 25813034 - 25813092
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  25813034 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 25813092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 411
Target Start/End: Original strand, 27225683 - 27225745
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| |||||| | ||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  27225683 tcccctcccctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacactt 27225745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 41322257 - 41322199
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  41322257 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 41322199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 42830550 - 42830604
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||||||||||| |  || ||||||||||||||||||||    
T  42830550 tcccctcaaagatgtttgaattacactccccgcccctcttatgttaaaatataca 42830604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 52506036 - 52505978
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  52506036 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 52505978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 1114935 - 1114886
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  1114935 agatgtttgaattacactcccctcccctcttatgttaaaatatacacttt 1114886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 7306971 - 7307028
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||    
T  7306971 tccccttaaagatgcttgaattatactctcatccccttttatgttaaaatatacactt 7307028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 18406549 - 18406598
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  18406549 aaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 18406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 27532637 - 27532584
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||| |||||||| ||||||||  ||||||||||||||||||||||    
T  27532637 ccctcaaagatgcttgaattatactctcattttctcttatgttaaaatatacac 27532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 28971529 - 28971468
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    ||||| |||| |||||||||||||||||||| |  ||||| |||||||||||||||||||||    
T  28971529 ctcccctcccgtcaaagatgtttgaattacatttacatcccctcttatgttaaaatatacac 28971468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 46683751 - 46683698
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| ||||||||||||| || | |||||||||||||||||||||||    
T  46683751 cctcaaagatgcttgaattacactcccaacttctcttatgttaaaatatacact 46683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 51611816 - 51611872
Alignment:
Q  358 ctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  51611816 ctcaaagatgtttgaattacacttctcttcc-ctcttatgttaaaatatacactttcc 51611872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 19997610 - 19997674
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||| ||||||| || ||||||| |||| ||| ||||||||||||||||||||||||    
T  19997610 ctcccctccccttaaagatgcttaaattacattctcctcccctcttatgttaaaatatacacttt 19997674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 36604733 - 36604796
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  36604733 ctcccctcccctcaaagatgcttgaattacactcctcttcc-ctcttatgttaaaatatacactt 36604796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 50143399 - 50143451
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  50143399 ccctcagagatgtttgaattacactcccctcccctcttatgttaaaatataca 50143451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 794804 - 794753
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| || |||||||||||| ||| ||||||||||||||||||||||    
T  794804 tcaaagatgatttaattacactctcctcccctcttatgttaaaatatacact 794753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 409
Target Start/End: Complemental strand, 1846601 - 1846546
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||||    
T  1846601 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacac 1846546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 17110077 - 17110022
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  17110077 cccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatatacact 17110022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 414
Target Start/End: Original strand, 19610937 - 19610984
Alignment:
Q  367 gtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  19610937 gtttgaattacactcccataccctcttatgttaaaatatacactttcc 19610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 41576071 - 41576016
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| |||||||||| || | |||||| ||||||||||||||||||||    
T  41576071 ccctcaaagatgcttgaattacattcccctcctcttttatgttaaaatatacactt 41576016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 47292325 - 47292246
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||| || | | |  |||||||||||| ||||||||    
T  47292325 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacattccccttccttcttatgttaaactatacact 47292246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 1845866 - 1845928
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| ||||||| |||||||    
T  1845866 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaacatacact 1845928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 17109312 - 17109373
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||||||||| |||||||||||||| |   ||||||||||||||||||||||||    
T  17109312 ctcccctcccctcaaagatatttgaattacactc-ctctctctcttatgttaaaatatacact 17109373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 27930771 - 27930829
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| ||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||    
T  27930771 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatata 27930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 42831269 - 42831207
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||||  ||||||||||||| | ||| ||||||||||||||||||||||    
T  42831269 ctcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatacact 42831207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 45559822 - 45559772
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  45559822 ctcaaagatgcttgaattacactcccatctcctcttatgttaaaatataca 45559772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 51362546 - 51362492
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||||||||||| || ||| || |||||||||||||||||||    
T  51362546 ccctcaaagatgcttgaattacactttcctccccttttatgttaaaatatacact 51362492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 395
Target Start/End: Complemental strand, 1386702 - 1386637
Alignment:
Q  330 tgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttat 395  Q
    |||||||||||||||  |||||| |||| ||||||||| ||||||||||||| | ||| |||||||    
T  1386702 tgagtaaattacacttctctcccctcccttcaaagatgcttgaattacactcccctcccctcttat 1386637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 29510533 - 29510484
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||| | | | ||||||||||||||||||||||    
T  29510533 aaagatgtttgaattacactccccttccctcttatgttaaaatatacact 29510484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 33126200 - 33126249
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||||||||| || | || |||||||||||||||||||    
T  33126200 cctcaaagatgtttgaattacattcccctcttctcttatgttaaaatata 33126249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 45738732 - 45738675
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||| |||||||||||||   ||| |||||||||||||||||||||||    
T  45738732 tcccatcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacactt 45738675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 4007572 - 4007620
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    ||||||| || |||||||||||| ||| |||||||||||||||||||||    
T  4007572 aaagatgcttaaattacactctcctcccctcttatgttaaaatatacac 4007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 19611384 - 19611328
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||||| |||||||||| |||| ||| ||||||||||||||| ||||||    
T  19611384 tcccctgaaagatgattgaattacattctcttcccctcttatgttaaaatttacact 19611328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 23739878 - 23739822
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  23739878 tcccttcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 23739822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 27522005 - 27521945
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||| || ||||||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  27522005 ctcccctccacttaaagatgcttgaattacactctcctcccctcttatattaaaatataca 27521945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 28044491 - 28044547
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||| |||| | || ||| |||||||||||||||||||    
T  28044491 tcccctcaaagatgcttgaattatactcccttcgtcttttatgttaaaatatacact 28044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 38011177 - 38011241
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||| ||| |||||||| |||| | ||| |||||| |||||||||||||||||    
T  38011177 ctcccctcccctcaaatatgcttgaattatactcacctcccctcttaagttaaaatatacacttt 38011241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 831990 - 831939
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  831990 tcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacact 831939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 406
Target Start/End: Complemental strand, 1117094 - 1117047
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||| |||||||||| | |||||||||||||| |||||||    
T  1117094 tcaaagatgtttaaattacactcccctcctctcttatgtttaaatata 1117047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Original strand, 29344551 - 29344590
Alignment:
Q  372 aattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  29344551 aattacactctcctcccctcttatgttaaaatatacactt 29344590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 406
Target Start/End: Original strand, 33113126 - 33113177
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||||||| ||||||||||||||||| | ||| |||||| |||||||||||    
T  33113126 cccctcaaaaatgtttgaattacactcccctcccctcttaagttaaaatata 33113177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 41575180 - 41575242
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||| ||| ||| ||||||||||||||||| ||||    
T  41575180 ctcccctcccctcaaagatgcttgaattacactcctcttcc-ctcttatgttaaaatatgcact 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 41575886 - 41575847
Alignment:
Q  372 aattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  41575886 aattacactctcctcccctcttatgttaaaatatacactt 41575847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 43319931 - 43319982
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||||||||| | ||  || |||||||||||||||||    
T  43319931 cctcaaagatgtttgaattacactcccctctccttttatgttaaaatataca 43319982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 47553160 - 47553203
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||    
T  47553160 atgtttgagttacactctcctcccctcttatgttaaaatataca 47553203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 49129730 - 49129683
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||||||||||| | ||| ||||||||||||||||||||    
T  49129730 aaagaagtttgaattacactcccctcccctcttatgttaaaatataca 49129683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 4667602 - 4667548
Alignment:
Q  361 aaagatgtttgaattacactctcatcc-----tctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||      ||||||||||||||||||||||    
T  4667602 aaagatgtttgaattacactctcatcccctctcctcttatgttaaaatatacact 4667548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 11916470 - 11916520
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||| ||||||||||||| | |||| | ||||||||||||||||||||    
T  11916470 aaagatgcttgaattacactcccctcctttattatgttaaaatatacactt 11916520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 38011913 - 38011859
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  38011913 cccttaaagatgcttgaattacactcccctccactcttaagttaaaatatacact 38011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 43504518 - 43504464
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||| ||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  43504518 cccttaaaaatgcttgaattatactctcctcccctcttatgttaaaatatacact 43504464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 47233072 - 47233126
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||  ||||||||||||| | |||  |||||||||||||||||||    
T  47233072 tcccctcaaagatacttgaattacactcccctcccttcttatgttaaaatataca 47233126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 52505300 - 52505362
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||| | | ||| |||||| |||| ||||||||||    
T  52505300 ctcccctcccctcaaagatgcttgaattacacccccctcccctcttaagttagaatatacact 52505362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 1116446 - 1116499
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    |||| ||||||||| ||||||||||||| | ||| || ||||||||||||||||    
T  1116446 tcccttcaaagatgcttgaattacactcccctccccttttatgttaaaatatac 1116499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 27931358 - 27931313
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  27931358 agatgcttgaattacactcccctcccctcttatgttaaaatataca 27931313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 2275105 - 2275157
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||| ||   ||| ||||||||||||||||||||||    
T  2275105 ctcaaagatctttgaattacattccattcccctcttatgttaaaatatacact 2275157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 15356940 - 15357000
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||  |||||| ||||||||||||  | ||| ||||||||||||||||||||    
T  15356940 ctcccctcccctttaagatggttgaattacacttccctcccctcttatgttaaaatataca 15357000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 28045204 - 28045152
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||||||||  | ||  ||||||||||||||||||||    
T  28045204 ccctctaagatgtttgaattacactaccctctcctcttatgttaaaatataca 28045152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 12927 - 12867
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12927 ctcccctcccctcaaagatgtttgaattacactctcttcctctcttatgttaaaatataca 12867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 9240848 - 9240928
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  9240848 gagtaaattacactcccctcccctcccctcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacactt 9240928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 3767082 - 3767135
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  3767082 tcaaagatgtttgaattacactctcatcccctcttaagttaaaatatacacttt 3767135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 14313917 - 14313857
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  14313917 ctcccatcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatataca 14313857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 14873780 - 14873701
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||||     |||||||||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  14873780 tttgagtaaattaca-----ctcccatcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 14873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 22342087 - 22342167
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||   ||||| |||||||||| ||| |||||||||||||  |||| |||||||||||||||||||||||    
T  22342087 gagtaaattacacttccctcccctcccctcaaatatgcttgaattacactcatatcccctcttatgttaaaatatacactt 22342167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 7448243 - 7448301
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||    
T  7448243 ccctcaaagatgcttgaattacactctccttctctcttatgttaaaatatacattttcc 7448301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 22022334 - 22022280
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  22022334 ccctcagagatgcttgaattacactctcatcccctcttatgttaaaatatacact 22022280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 25527736 - 25527798
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||    
T  25527736 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacact 25527798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 25528479 - 25528421
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||    
T  25528479 tcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacacttt 25528421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 424
Target Start/End: Original strand, 33266662 - 33266723
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacactttccatcttgaaaa 424  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||||||  ||||||||    
T  33266662 agatgtttaaattacactctcatctcctcttatgttaaaatatacactttcctccttgaaaa 33266723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 9241607 - 9241543
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  9241607 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 9241543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 11523545 - 11523481
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  11523545 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 11523481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 14306798 - 14306878
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttccat-cttgaaaagta 427  Q
    ||||| |||| ||||||||| |||||||||| |||| ||| ||||||||||||||||||||||| || | |||||||||||    
T  14306798 ctcccctcccttcaaagatgcttgaattacattctcctcccctcttatgttaaaatatacacttcccttccttgaaaagta 14306878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 34280022 - 34280086
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  34280022 ctcccctcccttcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacacttt 34280086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 34709985 - 34709921
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  34709985 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 34709921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 10702265 - 10702339
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||     |||||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  10702265 gagtaaattacactcatctccc-----ctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 10702339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 6936390 - 6936443
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6936390 ccctcaaa-atgtttgaattacactctcctcccctcttatgttaaaatatacact 6936443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 11522806 - 11522868
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  11522806 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 11522868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 12026265 - 12026203
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| |||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  12026265 ctcccctcctctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 12026203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 25577269 - 25577207
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||| | ||||||||||||| ||||| |||||| |||||||||||||||    
T  25577269 ctcccctcccctcaaagaagcttgaattacactcccatcccctcttaagttaaaatatacact 25577207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 33950232 - 33950294
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||| |||||||| ||| ||||||| ||||||||||||||    
T  33950232 ctcccctcccctcaaagatgcttgaatcacactctcctcccctcttattttaaaatatacact 33950294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 21802659 - 21802610
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  21802659 aaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 21802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 34794577 - 34794524
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  34794577 aaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcc 34794524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 3767808 - 3767752
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||||||||   ||| |||||| |||||||||||||||    
T  3767808 tcccctcaaagatgtttgaattacactcatctcccctcttaagttaaaatatacact 3767752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 4125893 - 4125945
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| || |||||||||||| ||| ||||||||||||||||||||||    
T  4125893 ctcaaagatgcttaaattacactctcctcccctcttatgttaaaatatacact 4125945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 5443758 - 5443694
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||||    
T  5443758 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacacttt 5443694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 12025523 - 12025587
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||||    
T  12025523 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacacttt 12025587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 14873024 - 14873084
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||    
T  14873024 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatataca 14873084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 22268525 - 22268581
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||| | ||||||||||||||| ||| ||||||||||||||| ||||||||    
T  22268525 ccctcaaagaagcttgaattacactctcctcccctcttatgttaaaatttacacttt 22268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 27923809 - 27923753
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  27923809 ccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 27923753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 14544512 - 14544473
Alignment:
Q  83 taaatgaaaatcgtgtagcgtttcaggcaaatccattata 122  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14544512 taaaagaaaatcgtgtagcgtttcaggcaaatccattata 14544473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 17307212 - 17307274
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  17307212 ctcccctcccctcaaagatgtttaaattacactcctcttcc-ctcttatgttaaaatatacact 17307274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 187782 - 187840
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||||    
T  187782 tcccctcaaagatgcttgaattacactcaccttccctcttaagttaaaatatacacttt 187840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 2091707 - 2091757
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  2091707 aaagatgtctgaattacactcccctcccctcttatgttaaaatatacactt 2091757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 2522675 - 2522737
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||| || ||| ||||||||||||||| ||| ||||||| ||||||||||||||    
T  2522675 ctcccctcccctctaatatgcttgaattacactctcctcccctcttatattaaaatatacact 2522737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 7448958 - 7448896
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||| ||| |||||||||||||   ||| ||||||||||||||||||||||    
T  7448958 ctcccctcccctcaaaaatgcttgaattacactcctttcccctcttatgttaaaatatacact 7448896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 11794835 - 11794773
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| | ||||||| ||||||||||||| ||||| ||||||||||||||| ||||||    
T  11794835 ctcccctccctttaaagatggttgaattacactcccatcccctcttatgttaaaatttacact 11794773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 12033185 - 12033123
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| |||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  12033185 ctcccctccgctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 12033123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 14224550 - 14224500
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  14224550 ccctcaaagatgcttgaattacactctcctctactcttatgttaaaatata 14224500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 21801953 - 21802007
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||| | |||  |||||||||||||||||||||    
T  21801953 ccctcaaagatgcttgaattacactcccctccattcttatgttaaaatatacact 21802007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 32522558 - 32522508
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||||   || ||||||||||||||||||||||||    
T  32522558 aaagatgtttgaattacactcatctcatctcttatgttaaaatatacactt 32522508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 5442998 - 5443079
Alignment:
Q  329 ttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| |||||  ||||| |||||||||||||  ||||||||||||  | |||  ||||| |||||||||||||||    
T  5442998 ttgagtaaatttcactcccctcccctcccctcaaagatacttgaattacacttccctcccttcttaagttaaaatatacact 5443079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 424
Target Start/End: Original strand, 5916104 - 5916173
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttccatcttgaaaa 424  Q
    ||||||||||| ||| ||||||||||| | | | |||||||||||||||||||||| |||| ||| ||||    
T  5916104 cccctcaaagaagttcgaattacactccccttccctcttatgttaaaatatacactctccacctttaaaa 5916173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 30461453 - 30461510
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| |||| |||||||  | ||| |||||||||||||||||||||||    
T  30461453 tcccctcaaagatgcttgatttacacttccctcccctcttatgttaaaatatacactt 30461510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 31882571 - 31882514
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||||||||||   ||| ||||| |||| ||||||||||||    
T  31882571 tcccctcaaagatgtttgaattacactcatctcccctcttgtgttcaaatatacactt 31882514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 32130949 - 32131005
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| ||| ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  32130949 tcccctaaaatatgtttgaattacactcccctcc-ctcttatgttaaaatatacactt 32131005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 33307828 - 33307877
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  33307828 aaagatgtttgaattaaactctctttctctcttatattaaaatatacact 33307877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 34250770 - 34250713
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||| ||||||||||||||  ||| |||||||| ||||||||||||||    
T  34250770 tcccttcaaagatgcttgaattacactcttctcccctcttatgctaaaatatacactt 34250713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 411
Target Start/End: Complemental strand, 2092394 - 2092342
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||||||||||||||||| | ||| ||||||| |||||||||||||||    
T  2092394 tcaaatatgtttgaattacactcccctcccctcttatattaaaatatacactt 2092342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 4100531 - 4100583
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| || |||||||||| | ||| ||||||||||||||||||||||    
T  4100531 ctcaaagatgcttaaattacactcccctcccctcttatgttaaaatatacact 4100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 10702994 - 10702939
Alignment:
Q  356 ccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||||||||||||||||    
T  10702994 ccctcaaagatgcttgaattacacttctc-tcccctcttatgttaaaatatacactt 10702939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 12766959 - 12767015
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||||| ||||||||||||| | ||| ||| ||||||||||||||||||    
T  12766959 tccccttaaagatgcttgaattacactcccctcccctcctatgttaaaatatacact 12767015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 16326128 - 16326076
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| |||||||||||||| | ||| ||||||| ||||||||||||||    
T  16326128 ctcaaagatatttgaattacactcacctcccctcttatattaaaatatacact 16326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 16349526 - 16349474
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| |||||||||||||| | ||| ||||||| ||||||||||||||    
T  16349526 ctcaaagatatttgaattacactcacctcccctcttatattaaaatatacact 16349474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 31881853 - 31881909
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||| | ||| || |||||||||||||||||||    
T  31881853 tcccttcaaagatgcttgaattacactcccctccccttttatgttaaaatatacact 31881909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 2523405 - 2523342
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||  | |||  ||||||||||||||||| ||||    
T  2523405 ctcccctcccctcaaagatgcttgaattacactgacctcccttcttatgttaaaatatatactt 2523342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 383
Target Start/End: Original strand, 3751920 - 3751955
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctc 383  Q
    ||||| ||||||||||||||||||||||||||||||    
T  3751920 ctcccctcccctcaaagatgtttgaattacactctc 3751955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 12693852 - 12693914
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||| |||| ||  ||||||||||||||||||||||    
T  12693852 ctcccctcccctcaaagatgcttgaattacacttctc-tctcctcttatgttaaaatatacact 12693914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 14313198 - 14313261
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| |||||||||| ||   ||| || ||||||||||||||||||||    
T  14313198 ctcccctcccctcaaagatgcttgaattacattcctctccccttttatgttaaaatatacactt 14313261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 34250075 - 34250130
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||| |||||||||||||||||||||   ||| || ||||||||||||||||||    
T  34250075 tccccttaaagatgtttgaattacactcatctcccctattatgttaaaatatacac 34250130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 188501 - 188439
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| | ||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  188501 ctcccctccctttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 188439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 4101177 - 4101130
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||| ||  || ||||||||||||||||||||||    
T  4101177 aaagatgtttgaattacactatc--cccctcttatgttaaaatatacact 4101130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 4126540 - 4126493
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||| ||  || ||||||||||||||||||||||    
T  4126540 aaagatgtttgaattacactatc--cccctcttatgttaaaatatacact 4126493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 7127725 - 7127663
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| || ||| |||||||| ||||||    
T  7127725 ctcccctcccctcaaagatgcttgaattacactcccctccccttttaagttaaaatgtacact 7127663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 411
Target Start/End: Complemental strand, 12767653 - 12767611
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||| | ||| |||||||||||||||||||||||    
T  12767653 ttgaattacactcccctcccctcttatgttaaaatatacactt 12767611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 411
Target Start/End: Complemental strand, 21847416 - 21847374
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||| |||||| ||| |||||||||||||||||||||||    
T  21847416 ttgaattagactctcctcccctcttatgttaaaatatacactt 21847374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 402
Target Start/End: Original strand, 28023567 - 28023621
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaa 402  Q
    ||||| |||| ||||||||||||||||||||||| | ||| ||||||| ||||||    
T  28023567 ctcccctcccttcaaagatgtttgaattacactcccctcccctcttatcttaaaa 28023621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 32521848 - 32521902
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||  |||||||||||||   ||| ||||||||||||||||||||    
T  32521848 tcccctcaaagatacttgaattacactcctttcccctcttatgttaaaatataca 32521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 22342208 - 22342257
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| |||||||||||||  ||||  ||||||||||||||||||||||    
T  22342208 aagatgcttgaattacactcatatcccttcttatgttaaaatatacactt 22342257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 2655637 - 2655593
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||| ||||||||||||  | ||||||||||||||||||||||    
T  2655637 aagatgcttgaattacacttccctcctctcttatgttaaaatata 2655593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 6029467 - 6029527
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  6029467 tcccctcaaagatgcttgaattacactctcatcctctcttatgttaaaatatacattttcc 6029527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 414
Target Start/End: Original strand, 31850026 - 31850077
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31850026 agatgcttgaattacactctcatcctctcttatgttaaaatatacactttcc 31850077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 27979967 - 27979905
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  27979967 ctcccctcccctcaaagatgtttgaattacaccctcctcatctcttatgttaaaatatacact 27979905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 36742129 - 36742190
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  36742129 tcccctcccctcaaagatgcttgaattaaactctcatcccctcttatgttaaaatatacact 36742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 13685975 - 13686055
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagta 427  Q
    ||||| || ||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  13685975 ctcccctctcctcaaagatccttgaattacactctcatcccctcttatgttaaaatatacactctcctttcttgaaaagta 13686055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 17781232 - 17781157
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  17781232 gagtaaattacactcccctcccctcccctcaaagatgcttgaattacactatc-tcccctcttatgttaaaatatac 17781157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 10687603 - 10687658
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  10687603 ccctcaaagatgcttgaattacactctcatcatctcttatgttaaattatacactt 10687658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 13686689 - 13686630
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    ||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13686689 ctcccctcctctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatac 13686630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 4877442 - 4877380
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||  || ||||||||||||||| ||| ||||||||||||||||||||||    
T  4877442 ctcccatcccctcaaatttgcttgaattacactctcctcccctcttatgttaaaatatacact 4877380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 6031431 - 6031358
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||||| ||     ||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  6031431 tttgagtaaattacactcctc-----tcccctcaaagatgtttgaattacactttcatcccttcttatgttaaaatata 6031358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 32050619 - 32050673
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  32050619 ctcaaagatgcttgaattacactctcattctctcttatgttaaaatgtacacttt 32050673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 35751523 - 35751585
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  35751523 ctcccctcccctcaaagatgcttgaattacactcccttcccctcttatgttaaaatatacact 35751585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 411
Target Start/End: Complemental strand, 42599054 - 42598992
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  42599054 tcccctcccctcaaaactgtttgaattacactctcctccactcttatgttaaaatatacactt 42598992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 1932091 - 1932031
Alignment:
Q  345 catctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||| ||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  1932091 catctccc-tcccctcaaagatgtttgaattatactcccctcctctcttatgttaaaatata 1932031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 412
Target Start/End: Complemental strand, 4055469 - 4055412
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  4055469 cccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatatacacttt 4055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 407
Target Start/End: Complemental strand, 17781318 - 17781265
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  17781318 tcccctcaaagatgcttgaattacactttcatcccctcttatgttaaaatatac 17781265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 31477032 - 31476967
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttc 413  Q
    ||||| || ||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||||    
T  31477032 ctcccctctcctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttc 31476967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 4876717 - 4876777
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||  |||||| |||||||||||| ||||||||||||||||||||    
T  4876717 ctcccctcccctcaaagatacttgaataacactctcatcccctcttatgttaaaatataca 4876777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 19408552 - 19408608
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  19408552 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 19408608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 20541049 - 20540985
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| |||||||||| |||| ||| |||||| |||||||||||||||||    
T  20541049 ctcccctcccctcaaagatgcttgaattacattctcctcccctcttaagttaaaatatacacttt 20540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 20691121 - 20691185
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  20691121 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 20691185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 31850727 - 31850667
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| |||||||||||||||  || ||||||||||||||||||||    
T  31850727 ctcccctcccctcaaagatgcttgaattacactctctacccctcttatgttaaaatataca 31850667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 36762120 - 36762184
Alignment:
Q  347 tctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| |||||||||||||| ||||||||||||| | ||| ||||||| |||||||||||||||    
T  36762120 tctcccctcccctcaaagatgcttgaattacactcccctcccctcttattttaaaatatacactt 36762184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 37333910 - 37333974
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  37333910 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 37333974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 37657388 - 37657452
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  37657388 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 37657452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 13280206 - 13280151
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||||||||  | ||| |||||||||||||||||||||||    
T  13280206 ccctcaaagatgtttgaattacactgccctcccctcttatgttaaaatatacactt 13280151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 21687375 - 21687426
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  21687375 ctcaaagatgcttgaattaccctctcattctctcttatgttaaaatatacac 21687426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 406
Target Start/End: Complemental strand, 27028725 - 27028650
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||  ||| | ||| || ||||||| ||||||||||||| | ||||||||||||||||||||||    
T  27028725 gagtaaattacactcccctctcctcctcttaaagatgcttgaattacactcccctcctctcttatgttaaaatata 27028650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 36737516 - 36737453
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||| ||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  36737516 ctcccctccccttaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 36737453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 9118842 - 9118904
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| || ||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  9118842 ctcccctcctcttaaagatgtttgaattacactcccttcctctcttaagttaaaatatacact 9118904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 20570135 - 20570197
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||| ||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  20570135 ctcccctcccttcagagatgcttgaattacactcccctcctctcttatgttaaaatatacact 20570197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 24624830 - 24624888
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  24624830 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 24624888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 27979244 - 27979298
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  27979244 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatataca 27979298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 8572712 - 8572769
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||| ||| ||||||||||||| | || ||||||||||||||||||||||||    
T  8572712 tcccctcaaaaatgcttgaattacactcccctcatctcttatgttaaaatatacactt 8572769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 414
Target Start/End: Complemental strand, 12586320 - 12586275
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||    
T  12586320 ttgaattatactctcatcctctcttatgttaaaatatacattttcc 12586275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 14594082 - 14594139
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||||||| ||   ||| |||||||||||||||||||||||    
T  14594082 tcccctcaaagatgtttgaattacaatcatctcccctcttatgttaaaatatacactt 14594139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 17781106 - 17781050
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  17781106 tcccctcaaagatgcttgaattacactc-cctcccctcttatgttaaaatatacactt 17781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 20570886 - 20570833
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||    
T  20570886 cctcaaagatgcttgaatcacactctcctcccctcttatgttaaaatatacact 20570833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 1931301 - 1931357
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||||||| ||||||||||  ||| ||||||||||||||||||||||    
T  1931301 tcccttcaaagatgtttggattacactctactcccctcttatgttaaaatatacact 1931357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 8573406 - 8573354
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| ||||||||||||||| | | ||||||||||||||||||||||    
T  8573406 ctcaaagatgcttgaattacactctccttccctcttatgttaaaatatacact 8573354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 9119615 - 9119551
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||| ||||||||    
T  9119615 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatgtacacttt 9119551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 6048003 - 6048054
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  6048003 tcaaagatgtttgaattacacttccctcccctcttatgttaaaatatacact 6048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 9017666 - 9017717
Alignment:
Q  360 caaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  9017666 caaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 9017717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 409
Target Start/End: Original strand, 18523741 - 18523796
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||| ||||||||  |||||||||||| |||||| |||||||||||||||||||||    
T  18523741 tcccttcaaagattcttgaattacactttcatcccctcttatgttaaaatatacac 18523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 1199812 - 1199750
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | | | |||||| |||||||||||||||    
T  1199812 ctcccctcccctcaaagatgcttgaattacactccccttccctcttaagttaaaatatacact 1199750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 3934040 - 3933986
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| ||||||||||||  | ||| ||||||||||||||||||||    
T  3934040 tcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatataca 3933986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 10688319 - 10688269
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||||||||    
T  10688319 ccctcaaagatgtttgaattatcctcccctcctctcttatgttaaaatata 10688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 15145140 - 15145086
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| ||||||||||||||| ||| | ||||| ||||||||||||    
T  15145140 tcccctcaaagatgcttgaattacactctcctccccacttatattaaaatataca 15145086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 18524431 - 18524373
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| |||||||||||||| |||||||||| || | ||| ||||||||||||||||||    
T  18524431 ctcccctcccctcaaagatgcttgaattacattcgcctcccctcttatgttaaaatata 18524373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 20184096 - 20184018
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||    |||| |||| ||||||||| ||||||||||||| | ||| ||||||||||| |||||||||||    
T  20184096 tttgagtaaattacact----tccc-tcccttcaaagatgcttgaattacactcccctcccctcttatgttacaatatacactt 20184018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 21639029 - 21639087
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  21639029 catcccttcaaagatgcttgaattacactccactcccctcttatgttaaaatatacact 21639087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 22731127 - 22731065
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||| || |||||||||||||| | |||  |||||||||||||||||||||    
T  22731127 ctcccctcccctcaaaaatatttgaattacactcccctcccttcttatgttaaaatatacact 22731065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 32020471 - 32020529
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| |||||||||||||| |||||||||| || | ||| ||||||||||||||||||    
T  32020471 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatata 32020529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 1406282 - 1406241
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  1406282 ttgaattacactctcatctcctcttatgttaaaatatacact 1406241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 4717319 - 4717278
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  4717319 ttgaattacactctcatcccttcttatgttaaaatatacact 4717278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 17780363 - 17780415
Alignment:
Q  358 ctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  17780363 ctcaaagatgcttgaattacactactc-tcctctcttatgttaaaatatacact 17780415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 20260054 - 20260009
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  20260054 atgtttgaattaaactcacatcccctcttatgttaaaatatacact 20260009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 37658141 - 37658080
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||| ||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  37658141 tcccctcccctcaaatatgcttgaattacactcccctcccctcttaagttaaaatatacact 37658080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 8007074 - 8007130
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||||  |  ||| ||||||||||||||||||||||    
T  8007074 tcccctcaaagatgcttgaattacaccgttctcccctcttatgttaaaatatacact 8007130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 15175223 - 15175275
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||| ||||||||||||  | ||| |||||||||||||||||||||||    
T  15175223 tcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactt 15175275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 17967837 - 17967889
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||| |||||||||| | |||||  |||||||||||||||||||||||    
T  17967837 tcaaagatgcttgaattacattttcatctcctcttatgttaaaatatacactt 17967889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 20183377 - 20183429
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| ||||||||||||| | |||  |||||||||||||||||||||    
T  20183377 ctcaaagatgcttgaattacactcccctcccttcttatgttaaaatatacact 20183429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 38498091 - 38498043
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaa 402  Q
    ||||||| |||||| ||||||||||||||| ||| ||||||||||||||    
T  38498091 tcccctcgaagatgcttgaattacactctcctcccctcttatgttaaaa 38498043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 3933321 - 3933376
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||| |||||||||||  || |||||| |||| |||||||||||||||    
T  3933321 ccctcaaagatgcttgaattacaccatcttcctcttttattttaaaatatacactt 3933376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 5139017 - 5138970
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||||||||    
T  5139017 agatgcttgaattacacttgcatcccctcttatgttaaaatatacact 5138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 15175939 - 15175852
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac-tttccatcttgaaaagtataatcta 434  Q
    ||||| |||||| | ||||| ||||||||||||| | |||  |||||||||||||||||||| | ||  |||||||||||| ||||||    
T  15175939 ctcccctcccctaagagatgcttgaattacactcccctcccttcttatgttaaaatatacacatctctctcttgaaaagtaaaatcta 15175852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 20691865 - 20691803
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctca-tcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||| | ||| |||||||||| |||||||||||||||    
T  20691865 ctcccctcccctcaaagatgcttgaattacaat-tcactcctctcttaagttaaaatatacact 20691803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 32458569 - 32458518
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||||||| ||| || |||| ||||||||||||||    
T  32458569 tcaaagatgcttgaattacactctcctccccttttatattaaaatatacact 32458518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 5138314 - 5138364
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||| || |||||||||| | |||| |||||||||||||||||    
T  5138314 ccctcaaagatgcttaaattacactcccctcctttcttatgttaaaatata 5138364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 9018368 - 9018318
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||| ||||| ||||||||||||  |||| |||||||||||||||||||    
T  9018368 ccctcagagatgcttgaattacacttccatcttctcttatgttaaaatata 9018318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 24625562 - 24625500
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||| | | ||| |||||| |||| ||||||||||    
T  24625562 ctcccctcccctcaaagatgcttgaattacacccccctcccctcttaagttagaatatacact 24625500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 34347207 - 34347161
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaa 402  Q
    |||||||||||| ||||||||||||||  |||||||||||| |||||    
T  34347207 ccctcaaagatgcttgaattacactctactcctctcttatgataaaa 34347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 40957476 - 40957422
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||| |||||| ||||||||||||| | ||| |||||| |||||||||||||    
T  40957476 tcccctctaagatgcttgaattacactcacctcccctcttaggttaaaatataca 40957422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 15144425 - 15144482
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| |||||||||||||||||| | ||   || ||||||||||||||||||||||||    
T  15144425 tcccttcaaagatgtttgaattatattcctttcatctcttatgttaaaatatacactt 15144482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 403
Target Start/End: Original strand, 22730418 - 22730467
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaat 403  Q
    |||||||||||||||||||||||||||  | ||  |||||||||||||||    
T  22730418 tcccctcaaagatgtttgaattacactaccctctcctcttatgttaaaat 22730467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 1764377 - 1764297
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||||  ||||| | |||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  1764377 gagtaaattacactcccctccctttccctcaaagatgcttaaattacactcccatcctctcttatgttaaaatatacactt 1764297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 14600366 - 14600449
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||||||||||||| | ||| | |||||||||||||||||||||    
T  14600366 tttgagtaaattacactctcctcccctcccctcaaagatgcttgaattacactcccctccccacttatgttaaaatatacactt 14600449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 1263125 - 1263060
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  1263125 tcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcc 1263060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 427
Target Start/End: Original strand, 1262406 - 1262486
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagta 427  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||| |||  ||||||||||||    
T  1262406 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactctcctctcttgaaaagta 1262486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 4757010 - 4757066
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  4757010 tcccctcaaagatgtttgaattacactctcctcccctcttaagttaaaatatacact 4757066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 435
Target Start/End: Complemental strand, 30605405 - 30605325
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagtataatctac 435  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||  ||||||| |||| |||||||    
T  30605405 ccctcaaagatgtttgaattacactcccctccactcttatgttaaaatatacacttccctctcttgaatagtaaaatctac 30605325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 45241216 - 45241272
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  45241216 tcccctcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 45241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 11345426 - 11345364
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  11345426 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 11345364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 16067954 - 16067900
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  16067954 ccctcaaagatgcttgaattacactcccattctctcttatgttaaaatatacact 16067900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 18364639 - 18364701
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  18364639 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 18364701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 18365348 - 18365286
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  18365348 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 18365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 27255294 - 27255356
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  27255294 ctcccctcccttcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 27255356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 37183087 - 37183149
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||    
T  37183087 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacact 37183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 44951053 - 44950987
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| || ||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||    
T  44951053 ctcccctctcctcaaagatgtttgaaatacactcacctcccctcttatgttaaaatatacactttcc 44950987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 19547096 - 19547035
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||    
T  19547096 tcccctcccctcaaagatgcttgaattacactattctcctctcttatgttaaaatatacact 19547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 54403574 - 54403631
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  54403574 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 54403631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 1364109 - 1364057
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  1364109 ctcaaagatgtttgaattacactcccatctcctcttatgttaaaatatacact 1364057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 22130464 - 22130400
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  22130464 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 22130400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 41864986 - 41865050
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||| ||||||||||||||||| | |||||| |||||||||||||||||    
T  41864986 ctcccctcccgtcaaagatgcttgaattacactctcattccctcttaagttaaaatatacacttt 41865050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 427
Target Start/End: Complemental strand, 44500102 - 44500030
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaagta 427  Q
    |||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||| ||  ||||||||||||    
T  44500102 ccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacacttccctctcttgaaaagta 44500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 16067246 - 16067293
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16067246 aaagatgtttgaattacactctcctcccctcttatgttaaaatataca 16067293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 27256041 - 27255978
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||| |||||||||||||||    
T  27256041 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatattaaaatatacactt 27255978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 40974030 - 40974105
Alignment:
Q  328 tttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||   |||  ||||||| |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  40974030 tttgagtaaattacactc---tcc--tcccctctaagatgtttgaattacactcccctcccctcttatgttaaaatataca 40974105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 41587395 - 41587316
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  ||||| ||| |||||||||  |||||||||||||   ||| ||||||||||||||||||||||    
T  41587395 gagtaaattacactctcctcccctcctctcaaagatacttgaattacactcctctcccctcttatgttaaaatatacact 41587316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 44950301 - 44950380
Alignment:
Q  331 gagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  ||||| |||||||||||||| || ||||||| |  | |||||||||||||| |||||||||||    
T  44950301 gagtaaattacactcccctcccctcccctcaaagatgcttcaattacaattccctcctctcttatgttgaaatatacact 44950380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 3090485 - 3090423
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  3090485 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttatgttaaaatatacact 3090423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 10887719 - 10887781
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  10887719 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 10887781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 23309687 - 23309625
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||||||||||  ||||||||||||||    
T  23309687 ctcccctcccctcaaagatgcttgaattacactcccctcctctcttaacttaaaatatacact 23309625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 49765190 - 49765136
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  49765190 tccccgcaaagatgtttgaattacactcccctcccctcttatgttaaaatataca 49765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 13623190 - 13623247
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||    
T  13623190 tcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactt 13623247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40974764 - 40974703
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||| ||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  40974764 tcccctcccctgaaagatgtttgaattacacttccgtcccctcttatgttaaaatatacact 40974703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 49764505 - 49764562
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||    
T  49764505 tcccctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacactt 49764562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 4558806 - 4558742
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| |||||||| |||| | ||| |||||| |||||||||||||||||    
T  4558806 ctcccctcccctcaaagatgcttgaattatactcccctcccctcttaagttaaaatatacacttt 4558742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 10888471 - 10888407
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| || |||||||||| | ||| |||||| |||||||||||||||||    
T  10888471 ctcccctcccctcaaagatgcttaaattacactcccctcccctcttaagttaaaatatacacttt 10888407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 11056627 - 11056563
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||| ||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  11056627 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 11056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 11414547 - 11414484
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||| ||| |||||||||||||    
T  11414547 ctcccatcccctcaaagatgcttgaattacactcccctcc-ctcttaagttgaaatatacacttt 11414484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 23308945 - 23309009
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||| ||||||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  23308945 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacacttt 23309009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 1779360 - 1779407
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||||||    
T  1779360 aaagaagtttgaattacactcacatcctctcttatattaaaatataca 1779407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 7725473 - 7725410
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||| |  |  |||||||||||||||||||||||    
T  7725473 ctcccctcccctcaaagatgcttgaattacactccccactcctcttatgttaaaatatacactt 7725410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 9293023 - 9293062
Alignment:
Q  83 taaatgaaaatcgtgtagcgtttcaggcaaatccattata 122  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9293023 taaaagaaaatcgtgtagcgtttcaggcaaatccattata 9293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 13625972 - 13625913
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    ||||| |||||||||||||| ||||||||||||| | |||  ||||||||||||||||||    
T  13625972 ctcccctcccctcaaagatgcttgaattacactcccctcccatcttatgttaaaatatac 13625913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 411
Target Start/End: Complemental strand, 14601084 - 14601029
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||||||||||||||  | |||| ||||||||||||||||||||||    
T  14601084 cccttaaagatgtttgaattacacttccttcctttcttatgttaaaatatacactt 14601029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 47793998 - 47794057
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttc 413  Q
    |||||||||||||| ||||||||||||| | ||  ||||||| |||||||||||||||||    
T  47793998 tcccctcaaagatgcttgaattacactcccctcacctcttatcttaaaatatacactttc 47794057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 49079968 - 49080027
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    ||||| |||||| ||||||  ||||||||||||||| ||| |||||||||||||||||||    
T  49079968 ctcccctcccctaaaagatcattgaattacactctcctcccctcttatgttaaaatatac 49080027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 291850 - 291788
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||| ||| ||||||||||| ||| ||| |||||||||| |||||||||||    
T  291850 ctcccctcccctcaaaaatgcttgaattacaccctcctcccctcttatgttcaaatatacact 291788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 1763660 - 1763714
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||||| || |||  | |||||||||||||||||||    
T  1763660 ccctcaaagatgtttgaattacactttcctccctttttatgttaaaatatacact 1763714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 2756662 - 2756612
Alignment:
Q  360 caaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  2756662 caaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 2756612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 4558041 - 4558103
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  4558041 ctcccctccccttaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 4558103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 9830283 - 9830345
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||| | |||||||||||| |||||| |||||| |||||||||||||||    
T  9830283 ctcccttcccctaaaagaagcttgaattacactttcatcccctcttaagttaaaatatacact 9830345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 14602177 - 14602115
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||  | ||| |||||| |||||||||||||||    
T  14602177 ctcccctcccctcaaagatgcttgaattacacttccctcccctcttaagttaaaatatacact 14602115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 27396710 - 27396764
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  27396710 ccctcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacact 27396764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 27639211 - 27639157
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| || |||||||||| ||||  ||||||||||||||||||||    
T  27639211 tcccctcaaagatgcttaaattacactcacatctcctcttatgttaaaatataca 27639157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 32222139 - 32222069
Alignment:
Q  366 tgtttgaattacactctcatcctctcttatgttaaaatatacactttccat-cttgaaaagtataatctac 435  Q
    |||||||||||||||| | |||  |||||||||||||||||||||| || | ||||||||||| |||||||    
T  32222139 tgtttgaattacactcccttcccttcttatgttaaaatatacacttaccttccttgaaaagtaaaatctac 32222069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 33115291 - 33115237
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||| ||||||||||||  | ||| ||||||||||||||||||||||||    
T  33115291 ctcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacacttt 33115237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 40036455 - 40036401
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  40036455 ccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacact 40036401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 40927502 - 40927564
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||| |||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  40927502 ctcccctcccctctaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 40927564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 47794713 - 47794659
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||| ||||||||||||||||||||| | ||  ||||||||||||||||||||    
T  47794713 tccccttaaagatgtttgaattacactcccctctcctcttatgttaaaatataca 47794659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 3089745 - 3089821
Alignment:
Q  329 ttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||     | |||||||||||||  ||||||||||||  | ||| ||||||||||||||||||||||    
T  3089745 ttgagtaaattacactca-----cctcccctcaaagatacttgaattacacttccctcccctcttatgttaaaatatacact 3089821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 33979335 - 33979290
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||    
T  33979335 aaagatgtttgaattatactctcctcctcttttatgttaaaatata 33979290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 45307414 - 45307362
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||| || ||||||||| ||| |||||||||||||||||||||||    
T  45307414 ctcaaagatgtttaaactacactctcctcc-ctcttatgttaaaatatacactt 45307362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 48224198 - 48224141
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||| ||||||||||||| | |||  ||||||||||||||||||||||    
T  48224198 tcccttcaaagatgcttgaattacactcccctcccatcttatgttaaaatatacactt 48224141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 54605780 - 54605833
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| |||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  54605780 cctcaatgatgcttgaattacactcccctcccctcttatgttaaaatatacact 54605833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 408
Target Start/End: Complemental strand, 55205009 - 55204968
Alignment:
Q  367 gtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  55205009 gtttgaattacactcacatcctcttttatgttaaaatataca 55204968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 11389037 - 11388973
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||| | ||| | |||||||||| |||| ||| ||||||||||||||| ||||||||    
T  11389037 ctcccatcccctaagagaagcttgaattacattctcctcccctcttatgttaaaatctacacttt 11388973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 20030639 - 20030579
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||| |||||||||| |  | ||| |||||||||||||| |||||||||||    
T  20030639 tcccctcaaagatgcttgaattacatttccctcccctcttatgttaaaacatacactttcc 20030579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 24542319 - 24542383
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||  ||||||||||||  ||||  |||||| |||||||||||||||||    
T  24542319 ctcccctcccctcaaagatacttgaattacacttccatctcctcttaagttaaaatatacacttt 24542383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 27395136 - 27395080
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  27395136 tcccttcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacact 27395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 30604690 - 30604746
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| || ||||||| || | | ||||||||||||||||||||||||    
T  30604690 tcccctcaaagatgattaaattacattccccttctctcttatgttaaaatatacact 30604746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 32737232 - 32737176
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||||| || ||| || ||| |||||||||||||||    
T  32737232 tcccctcaaagatgcttgaattacactttcctccccttttaagttaaaatatacact 32737176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 37183827 - 37183763
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| ||| |||||| ||| ||||||||||||| | ||| |||||| |||||||||||||||||    
T  37183827 ctcccctcctctcaaaaatgcttgaattacactcccgtcccctcttaagttaaaatatacacttt 37183763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 49080666 - 49080614
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| |||||||||| || | ||| ||||||||||||||||||||||    
T  49080666 ctcaaagatgcttgaattacattcccctcccctcttatgttaaaatatacact 49080614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 54606485 - 54606429
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||| ||||||||||||||||| | ||  ||||||||||||||||||||||    
T  54606485 tcccctaaaaaatgtttgaattacactcccctctcctcttatgttaaaatatacact 54606429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 6293226 - 6293277
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||| |  | ||| ||||||||||||||||||||||    
T  6293226 tcaaagatgtttgaattacatttccctcccctcttatgttaaaatatacact 6293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 32373316 - 32373371
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| ||||||||||||||||||  |  ||||||||||||||||||||| |||||    
T  32373316 tcaaatatgtttgaattacactcttctattctcttatgttaaaatatacattttcc 32373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Original strand, 37973460 - 37973507
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||||    
T  37973460 aaagatgtttgaattacactttcatccccttttatattaaaatataca 37973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 8449880 - 8449822
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctc-----ttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||||||| ||| |||     |||||||||||||||||||    
T  8449880 cctcaaagatgtttgaattacactctcctcccctccacttttatgttaaaatatacact 8449822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 20029913 - 20029975
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||| || ||||||||||||||||  | ||  ||||||||||||||||||||||    
T  20029913 ctcccctcccctctaaaatgtttgaattacacttccttcgcctcttatgttaaaatatacact 20029975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 22524862 - 22524804
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| ||||||||||||| | ||   ||||| |||||||||||||||||    
T  22524862 tcccctcaaagatgcttgaattacactcccttctcatcttaagttaaaatatacacttt 22524804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 25480544 - 25480602
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||| ||||||| |||||||| |||| | |||  |||||||||||||||||||||||||    
T  25480544 cccttaaagatgcttgaattatactcccctcccatcttatgttaaaatatacactttcc 25480602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 48842089 - 48842028
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||||| ||||||||||||| | ||| || |||||||||||||||||||    
T  48842089 ctcccctccccttaaagatgattgaattacactcccctcc-cttttatgttaaaatatacact 48842028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 53490058 - 53490119
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctca-tcctctcttatgttaaaatatacac 409  Q
    ||||| |||| ||||||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  53490058 ctcccctcccttcaaagatgcttgaattacact-tcattcccctcttatgttaaaatatacac 53490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 11344700 - 11344761
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    ||||| |||| ||||||||  ||||||||||||| | ||| |||||||| ||||||||||||    
T  11344700 ctcccctcccgtcaaagatacttgaattacactcccctcccctcttatgctaaaatatacac 11344761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 406
Target Start/End: Complemental strand, 25259988 - 25259947
Alignment:
Q  365 atgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||||||||||||||| | |||||| |||||||||||||||    
T  25259988 atgtttgaattacactcccctcctcttttatgttaaaatata 25259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 30106270 - 30106221
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||||| ||| ||||||||||||||| || | |||||||||||||||||    
T  30106270 cctcaaaaatgcttgaattacactctcctcttttcttatgttaaaatata 30106221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 32255786 - 32255729
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||  | ||  |||||||||||||||||| ||||    
T  32255786 tcccctcaaagatgcttgaattacacttccctctcctcttatgttaaaatatatactt 32255729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 41586660 - 41586718
Alignment:
Q  354 tcccctcaaagatgtttgaattacact---ctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||   ||| ||| ||||||||||||||||||||||    
T  41586660 tcccctcaaagatgcttgaattacactaccctc-tcccctcttatgttaaaatatacact 41586718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 4757107 - 4757171
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||| | ||| | |||||||||| |||| ||| ||||||||||||||| ||||||||    
T  4757107 ctcccctcccctaagagaagcttgaattacattctcctccactcttatgttaaaatctacacttt 4757171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 10688797 - 10688857
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| |||| ||||| ||   ||| ||||||||||||||||||||    
T  10688797 ctcccctcccctcaaagatgcttgacttacattcctctcccctcttatgttaaaatataca 10688857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 20612176 - 20612116
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||| |||||| ||||||||||||  | | | ||||||||||||||||||||    
T  20612176 ctcccctcccctctaagatgcttgaattacacttcccttccctcttatgttaaaatataca 20612116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 27394261 - 27394320
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||||||||||  |||||||||| | | ||| ||||||||||||||||||||    
T  27394261 ctcccctcccctcaaagatgcatgaattacac-cccctcccctcttatgttaaaatataca 27394320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 48223584 - 48223632
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||| || |||  ||||||||||||||||||||||    
T  48223584 agatgcttgaattacactttcctcccttcttatgttaaaatatacactt 48223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 11563809 - 11563866
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  11563809 tcccctcaaagatgcttgaattacactctcatcccctcttatgttaaaatatacactt 11563866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 1366474 - 1366420
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1366474 tccccttaaagatgtttgaattacactctcctcctctcttatgttaaaatataca 1366420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 37199667 - 37199605
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  37199667 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacact 37199605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 5475201 - 5475141
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  5475201 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttatgttaaaatataca 5475141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 34173781 - 34173721
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  34173781 ctcccctcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatataca 34173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 12414351 - 12414301
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaata 404  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12414351 tcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12414301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 12426411 - 12426361
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaata 404  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12426411 tcccctcaaagatgtttgaattacattctcctcctctcttatgttaaaata 12426361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 35658934 - 35658880
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  35658934 tcccctcaaagatatttgaattacactcacatcccctcttatgttaaaatataca 35658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 38910694 - 38910744
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  38910694 aaagatgtttgaattacactcccctcctctcttatgttaaaatatacactt 38910744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 44332442 - 44332388
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44332442 ccctcagagatgcttgaattacactctcatcccctcttatgttaaaatatacact 44332388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 13874040 - 13873991
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  13874040 aaagatgtttgaattacactcttctcctctcttatgttaaaatatacact 13873991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 14014165 - 14014116
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  14014165 aaagatgtttgaattacactcttctcctctcttatgttaaaatatacact 14014116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 3515534 - 3515478
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||    
T  3515534 tcccctcaaagatgtttgaattacacccccctcccctcttatgttaaaatatacact 3515478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 7940051 - 7939999
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  7940051 ctcaaagatgtttgaattacactctcctccccttttatgttaaaatatacact 7939999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 410
Target Start/End: Complemental strand, 41078212 - 41078164
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  41078212 aagatgtttgaactacactctcctcctctcttatgttaaaatatacact 41078164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 43439141 - 43439197
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  43439141 tcccttcaaagatgtttgagttacactcttttcctctcttatgttaaaatatacact 43439197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 427
Target Start/End: Complemental strand, 11796877 - 11796798
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttccatcttgaaaagta 427  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||| || ||  |||||||||||    
T  11796877 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacatttccctccttgaaaagta 11796798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 34248130 - 34248067
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||||||    
T  34248130 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacactt 34248067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 3044942 - 3044996
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||    
T  3044942 ccctcaaagatgcttgaattacactctcctcacctcttatgttaaaatatacact 3044996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 411
Target Start/End: Complemental strand, 16111233 - 16111171
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| |||||||||||||| ||||||||||||| | ||| |||||| ||||||||||||||||    
T  16111233 tcccctcccctcaaagatgcttgaattacactcccctccactcttaagttaaaatatacactt 16111171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 26196237 - 26196275
Alignment:
Q  372 aattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26196237 aattacactctcatcctctcttatgttaaaatatacact 26196275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 33146041 - 33146103
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||| ||||| | ||| ||||||||||||||||||||||    
T  33146041 ctcccctcccctcaaagatgcttgaattgcactcccctcccctcttatgttaaaatatacact 33146103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 7939339 - 7939396
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||| ||||||||||||||| | | |||||||||||||||||||||||    
T  7939339 tcccttcaaagatgcttgaattacactctccttccctcttatgttaaaatatacactt 7939396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 37009007 - 37009064
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  37009007 tcccatcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 37009064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40769436 - 40769375
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||    
T  40769436 tcccctcccctcaaagatggttgaattacactcccctcacctcttatgttaaaatatacact 40769375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 4437318 - 4437378
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||| |||||| ||||||||||||  ||||| ||||||||||||||||||||    
T  4437318 ctcccctcccctctaagatgcttgaattacacttccatcccctcttatgttaaaatataca 4437378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 17829063 - 17829119
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  17829063 tcccctcaaagatgcttgaattacactccactcccctcttatgttaaaatatacact 17829119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 20894342 - 20894286
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  20894342 tcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 20894286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 22607044 - 22606988
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||| | || |||||||||||||||||||||||    
T  22607044 tcccatcaaagatgcttgaattacactcccctcttctcttatgttaaaatatacact 22606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 34173058 - 34173114
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  34173058 tcccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatatacact 34173114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 38973212 - 38973148
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| || |||||||||| | ||| |||||| |||||||||||||||||    
T  38973212 ctcccctcccctcaaagatgcttcaattacactcccctcccctcttaagttaaaatatacacttt 38973148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 41521764 - 41521708
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||| |||| |||  |||||||||||||||||||||    
T  41521764 tcccctcaaagatgcttgaattacattctcttcccttcttatgttaaaatatacact 41521708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 4438035 - 4437984
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  4438035 tcaaagatgtttgaattacactcctctcccctcttatgttaaaatatacact 4437984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 22606322 - 22606385
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||  ||||||||||| |   |||||||||||||||||||||||||||    
T  22606322 ctcccctcccctcaaagatccttgaattacacacctctcctctcttatgttaaaatatacactt 22606385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 37330431 - 37330380
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||||||| ||  ||||||||||||||||||||||    
T  37330431 tcaaagatgcttgaattacactctcttctcctcttatgttaaaatatacact 37330380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 40947449 - 40947500
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||| ||||||||||||||| ||| || |||||||||||||||||||    
T  40947449 tcaaagatgcttgaattacactctcctccccttttatgttaaaatatacact 40947500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 6229952 - 6229890
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  ||||||||||||| | | | ||||||||||||||||||||||    
T  6229952 ctcccctcccctcaaagatccttgaattacactccccttccctcttatgttaaaatatacact 6229890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 11051565 - 11051627
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||||  ||||||||||||| |  |||||||||||||||||||||||||    
T  11051565 ctcccctcccctaaaagatacttgaattacactccccacctctcttatgttaaaatatacact 11051627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 28167554 - 28167608
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||| | | | ||||||||||||||||||||||    
T  28167554 ccctcaaagatgattgaattacactccccttccctcttatgttaaaatatacact 28167608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 31597231 - 31597289
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| ||||||||| |||| ||||||||||||| | ||| ||||||||||||||||||    
T  31597231 ctcccctcccctcaaggatgcttgaattacactcacctcccctcttatgttaaaatata 31597289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 31597870 - 31597820
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||||| |||  |||||| |||||||||||||||    
T  31597870 aaagatgtttgaattacactctcctcccttcttatattaaaatatacactt 31597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 32875176 - 32875226
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  32875176 aaagatgcttgaattacactcttcttctctcttatgttaaaatatacactt 32875226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 33476638 - 33476565
Alignment:
Q  329 ttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    |||||||||||||||||||||||      |||||| ||| |||||||||||||   |||||||||||||||||||||||    
T  33476638 ttgagtaaattacactcatctcct-----ctcaaaaatgcttgaattacactcatctcctctcttatgttaaaatatac 33476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 35899144 - 35899206
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| || |||||||||| | ||| |||||| |||||||||||||||    
T  35899144 ctcccctcccctcaaagatgcttcaattacactcccctcccctcttaagttaaaatatacact 35899206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 41077504 - 41077562
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||| ||||||  ||||||||||||||||| | |||||||||| |||||||||||    
T  41077504 catccccttaaagattcttgaattacactctcattccctcttatgttgaaatatacact 41077562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 3045682 - 3045586
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc-atcttgaaaag 425  Q
    |||||||||||||||||||     || |||||||||||||| |||||||| | |||  | | ||||||||||||||||||||||| ||  ||||||||||    
T  3045682 atttgagtaaattacactc-----ccctcccctcaaagatgcttgaattaaattcttcttccctcttatgttaaaatatacacttccctctcttgaaaag 3045588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 8313671 - 8313724
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| |||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  8313671 cctcaaggatgcttgaattacactcccctcccctcttatgttaaaatatacact 8313724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 31363906 - 31363963
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||| | | | | |||||||||||||||||||||||    
T  31363906 tcccctcaaagatgcttgaattacacaccccttccctcttatgttaaaatatacactt 31363963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 20893210 - 20893274
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| ||| |||||||||| |||||||||| || | ||| |||||| |||||||||||||||||    
T  20893210 ctcccctcctctcaaagatgcttgaattacaatcccctcccctcttaagttaaaatatacacttt 20893274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 34247389 - 34247453
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | |||  ||||| |||||||| ||||||||    
T  34247389 ctcccctcccctcaaagatgcttgaattacactcccctcccttcttaagttaaaatctacacttt 34247453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 35657453 - 35657509
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||| |||||||||| || | ||| ||||||||||||||| ||||||||    
T  35657453 ccctcaaagatgcttgaattacattcccctcccctcttatgttaaaatctacacttt 35657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 35899886 - 35899822
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||| || |||||||||| | ||| |||||| |||||||||||||||||    
T  35899886 ctcccttcccttcaaagatgcttcaattacactcccctcccctcttaagttaaaatatacacttt 35899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 35954062 - 35954002
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||| | ||||||||||||||||||||  | ||| ||||||||||||||||||||    
T  35954062 ctcccctcccttaaaagatgtttgaattacacttccctcccctcttatgttaaaatataca 35954002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 43656920 - 43656976
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| ||||||||||||||||| ||| |  ||||| |||||||||||||||    
T  43656920 tcccctcaaatatgtttgaattacactcccattccatcttaagttaaaatatacact 43656976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 43657660 - 43657596
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||  | |||  ||||| |||||||||||||||||    
T  43657660 ctcccctcccctcaaagatgcttgaattacacttccctcccatcttaagttaaaatatacacttt 43657596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 11563633 - 11563688
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||  |||||||||||| | | | |||||||||||||||||||||||    
T  11563633 ccctcaaagatgaatgaattacactcccctaccctcttatgttaaaatatacactt 11563688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 15007157 - 15007106
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||| |||||||||||||| | ||| |||||||| |||||||||||||    
T  15007157 tcaaagatctttgaattacactcccctcccctcttatgctaaaatatacact 15007106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 16110488 - 16110551
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||| |||||||||| ||| |||||||||||||   ||| |||||| |||||||||||||||||    
T  16110488 tcccctcccctcaaaaatgcttgaattacactcctctcccctcttaagttaaaatatacacttt 16110551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 38911388 - 38911338
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||| | | | ||||||||||||||||||||||    
T  38911388 tcaaagatgtttgaattacactccccttc-ctcttatgttaaaatatacact 38911338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 552567 - 552513
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||| | ||| | |||| |||||||||||||||    
T  552567 ccctcaaagatgcttgaattacactcccctccccccttaagttaaaatatacact 552513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 10357172 - 10357126
Alignment:
Q  364 gatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  10357172 gatgcttgaattacactcccctcccctcttatgttaaaatatacact 10357126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 11796146 - 11796208
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| ||||||||| || |||||||||| | ||| ||||||||||||||| ||||||    
T  11796146 ctcccctcccttcaaagatgcttcaattacactcccctcccctcttatgttaaaatgtacact 11796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 14335767 - 14335713
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||||| | || | |||||||||||||||||||    
T  14335767 cccttaaagatgcttgaattacactctctttctattttatgttaaaatatacact 14335713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 15006437 - 15006498
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  |||||||||| || | ||| ||||||||||||||||||||||    
T  15006437 ctcccctcccctcaaagatacttgaattaca-tcccctcccctcttatgttaaaatatacact 15006498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 31709797 - 31709739
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| || ||||||||||   ||| |||||||||||||||||||| |||||    
T  31709797 ccctcaaagatgcttaaattacactcctctcccctcttatgttaaaatatacattttcc 31709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 32879466 - 32879418
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  32879466 aaagatgtttgaattacactc-cttcct-tcttatgttaaaatatacactt 32879418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 33146770 - 33146708
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  ||||| |||||||   ||| ||||||||||||||||||||||    
T  33146770 ctcccctcccctcaaagatacttgaactacactcctctcccctcttatgttaaaatatacact 33146708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 411
Target Start/End: Original strand, 36143284 - 36143326
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||    
T  36143284 ttgaattacactctcctccactcttacgttaaaatatacactt 36143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 37009719 - 37009665
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| || ||||||||||   ||| ||||||||||||||||||||||    
T  37009719 ccctcaaagatgcttaaattacactcctctcccctcttatgttaaaatatacact 37009665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 1534192 - 1534233
Alignment:
Q  367 gtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||| | ||||||||||| ||||||||||||    
T  1534192 gtttgaattacactcacctcctctcttatattaaaatataca 1534233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 11564515 - 11564474
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||    
T  11564515 ttgaattacacactcttcccctcttatgttaaaatatacact 11564474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 24758137 - 24758190
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||| |||  | |||| ||||||||||||||||| |||||||    
T  24758137 aaagatgtttgaattagacttacctcctatcttatgttaaaatatatactttcc 24758190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 42791459 - 42791519
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatataca 408  Q
    ||||| ||||||| |||||| ||||||||||| |||| ||| ||||||||||||||||||||    
T  42791459 ctcccctcccctctaagatgcttgaattacacttctc-tcccctcttatgttaaaatataca 42791519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 551837 - 551896
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||| ||||||||||||||||||||||| |     |||||| |||||||||||||||||    
T  551837 ctcccctcccttcaaagatgtttgaattacactccc-----ctcttaagttaaaatatacacttt 551896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 5113615 - 5113670
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| || ||||||||||||| | ||| ||||||||||||| ||||||||    
T  5113615 tcccctcaaagttgcttgaattacactcacctcc-ctcttatgttaaattatacact 5113670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 24758841 - 24758781
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||| ||||||||| |||||||||||||   ||  || |||||||||||||||||||||||    
T  24758841 tcccatcaaagatgcttgaattacactcctctctccttttatgttaaaatatacactttcc 24758781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 34830765 - 34830821
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||  ||||||||||||| | ||| |||| |||||||||||||||||    
T  34830765 tcccttcaaagatacttgaattacactcccctcccctctcatgttaaaatatacact 34830821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 37198941 - 37198992
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| ||||||||||||| |     ||||||||||||||||||||||    
T  37198941 tcccctcaaagatgcttgaattacactccc-----ctcttatgttaaaatatacact 37198992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 39160349 - 39160285
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| |||||||||| || | ||| |||||| |||||||| ||| ||||    
T  39160349 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaatctacgcttt 39160285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 39208845 - 39208909
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| |||||||||| || | ||| |||||| |||||||| ||| ||||    
T  39208845 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaatctacgcttt 39208909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 77)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 14879529 - 14879589
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14879529 ctcccctcccctcaaagatgtttgaattacactctcctcccctcttatgttaaaatataca 14879589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 410
Target Start/End: Original strand, 40791059 - 40791117
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  40791059 catcccctcaaagatgtttgaattatactctcctcccctcttatgttaaaatatacact 40791117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 414
Target Start/End: Complemental strand, 4856016 - 4855936
Alignment:
Q  329 ttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||||||||||||| ||     |||||||||||||||||||||   || |||||||||||||||||||||||||||    
T  4856016 ttgagtaaattacactcatctcccttc-----aaagatgtttgaattacactcctctcatctcttatgttaaaatatacactttcc 4855936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 25597782 - 25597846
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||||||| ||||||||||||| | |||||||||| |||||||||||||||||    
T  25597782 ctcccctcccctcaaagatgcttgaattacactcccctcctctcttaagttaaaatatacacttt 25597846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 34679986 - 34679926
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  34679986 tcccctcaaagatgcttgaattacactctcctcccctcgtatgttaaaatatacactttcc 34679926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 11760136 - 11760073
Alignment:
Q  347 tctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| |||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  11760136 tctcccctcccttcaaagatgcttgaattacattctcctcctctcttatgttaaaatatacact 11760073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 3075315 - 3075377
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| ||||||||||||||||||||||    
T  3075315 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacact 3075377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 8442664 - 8442726
Alignment:
Q  347 tctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||| ||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  8442664 tctcccctcctctcaaagatgcttgaattacactctcttcccctcttatgttaaaatatacac 8442726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 11141129 - 11141067
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||| || | ||||||||||||||||||||||||||    
T  11141129 ctcccctcccctcaaagatgcttgaattacattcccctcctctcttatgttaaaatatacact 11141067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 11759397 - 11759463
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| |||||||||||||| ||||||||||||| | ||| | ||||||||||||||||||||||||    
T  11759397 ctcccctcccctcaaagatgcttgaattacactcccctccccacttatgttaaaatatacactttcc 11759463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 14880250 - 14880193
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  14880250 tcccctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 14880193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 43764074 - 43764149
Alignment:
Q  330 tgagtaaattacactcatctcccatcccctcaaagatgtttgaattacac-tctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||||     ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  43764074 tgagtaaattacactcatctccca-----tcaaagatgtttgaattacacttctc-tcccctcttatgttaaaatatacact 43764149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 410
Target Start/End: Original strand, 14363766 - 14363846
Alignment:
Q  331 gagtaaattacactcatctccca-tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||  |||||  |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  14363766 gagtaaattacactcccctccccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 14363846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 24810323 - 24810265
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatac 407  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  24810323 ctcccctcccctcaaagatatttgaattacactctcatcccct-ttatgttaaaatatac 24810265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 31739525 - 31739580
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  31739525 cccctaaaagatgcttgaattacactgtcatcccctcttatgttaaaatatacact 31739580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 411
Target Start/End: Complemental strand, 32904283 - 32904224
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||| ||||||||| ||||||||||||| | ||| |||||||||||||||||||||||    
T  32904283 catcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 32904224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 37872290 - 37872345
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||| |||||    
T  37872290 tcaaagatgtttaaattacactcccctcctctcttatgttaaaatatacattttcc 37872345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 5551572 - 5551622
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  5551572 ctcaaagatgcttgaattacactctcctcctctcttatgctaaaatataca 5551622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 6099538 - 6099484
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  6099538 tcccctcaaagatgcttgaattacactctcctctcctcttatgttaaaatataca 6099484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 17564677 - 17564739
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| ||| |||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  17564677 ctcccctcctctcaaagatgtttgaattacacttccctcccctcttatgttaaaatatacact 17564739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 22934298 - 22934360
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  22934298 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 22934360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 36016819 - 36016765
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||||||||| || | ||||||||||||||||||||||||||    
T  36016819 ccctcaaagatgcttgaattacaatcccctcctctcttatgttaaaatatacact 36016765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 39998379 - 39998441
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||| ||||||||| |||||    
T  39998379 ctcccctcccctcaaagatgcttgaattacactctcctcccctcttaagttaaaatacacact 39998441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 44284418 - 44284352
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| |||||| | ||||| ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  44284418 ctcccctcccctaagagatgcttgaattacactcccctcccctcttatgttaaaatatacactttcc 44284352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 8437919 - 8437968
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  8437919 aaagatgtttgaattacactccactcctctcttatgttaaaatatacact 8437968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 17496986 - 17496934
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  17496986 cccctcaaagatgtttgaattacactc-cctcccctcttatgttaaaatataca 17496934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Original strand, 24778003 - 24778060
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||  ||||||||||||||| ||| |||||||||||||||||||||||    
T  24778003 tcccatcaaagatacttgaattacactctcctcccctcttatgttaaaatatacactt 24778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 32905389 - 32905332
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||||| |||  | ||||||||||||||||||||    
T  32905389 tcccctcaaagatgcttgaattacactctcctccctttttatgttaaaatatacactt 32905332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Complemental strand, 6293265 - 6293205
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||    
T  6293265 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatataca 6293205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 13421456 - 13421512
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||    
T  13421456 tcccctcaaaaatgcatgaattacactctcatctcctcttatgttaaaatatacact 13421512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 25485483 - 25485432
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||| | ||| |||||| |||||||||||||||    
T  25485483 tcaaagatgtttgaattacactcccctcccctcttaagttaaaatatacact 25485432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 3075147 - 3075201
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| ||||||||||||  | ||| ||||||||||||||||||||    
T  3075147 tcccctcaaagatgcttgaattacactaccctcccctcttatgttaaaatataca 3075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 10216203 - 10216141
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||  |||||||||||||||    
T  10216203 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttcagttaaaatatacact 10216141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 22936036 - 22935978
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| || |||||||||| | ||| |||||| |||||||||||||||||    
T  22936036 tcccctcaaagatgcttaaattacactcccctcccctcttaagttaaaatatacacttt 22935978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 29636446 - 29636392
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  29636446 ccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 29636392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 13573833 - 13573784
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||    
T  13573833 aaagatgtttgaattacactctcgtcccctcttatattaaaatatgcact 13573784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 412
Target Start/End: Complemental strand, 14364545 - 14364464
Alignment:
Q  332 agtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcat-cctctcttatgttaaaatatacacttt 412  Q
    ||||||||||||||  ||||| || ||||||||||| ||||||||||||| | | || || ||| |||||||||||||||||    
T  14364545 agtaaattacactcccctcccctctcctcaaagatgcttgaattacactcccctcccccttttaagttaaaatatacacttt 14364464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 17734975 - 17734919
Alignment:
Q  352 catcccctcaaagatgtttgaattacact-ctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||    
T  17734975 catcccctcaaatatgtttgaattacactcctcttcc-ctcttatgttaaaatataca 17734919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 21304687 - 21304639
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  21304687 aaagatgtttgaattacactacc-tcctctcttatgttaaaatatacact 21304639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 37266201 - 37266148
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||  || |||||||||||| ||| ||||||||||||||||||||||    
T  37266201 cctcaaagattctttaattacactctcctcccctcttatgttaaaatatacact 37266148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 37837635 - 37837582
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||| |||||||||| |||| ||| ||||||| |||||||||||||||    
T  37837635 ctcaaagatgcttgaattacattctcctcccctcttatcttaaaatatacactt 37837582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40791822 - 40791761
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| |||| ||||||||| |||||||||||||   ||| ||||||||||||||||||||||    
T  40791822 tcccctcccatcaaagatgcttgaattacactcctctcccctcttatgttaaaatatacact 40791761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 253535 - 253594
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||||    || ||||||||||||||||||||||    
T  253535 ctcccctcccctcaaagatgcttgaattacactc---ccccctcttatgttaaaatatacact 253594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 662323 - 662264
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||||    || ||||||||||||||||||||||    
T  662323 ctcccctcccctcaaagatgcttgaattacactc---ccccctcttatgttaaaatatacact 662264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 848121 - 848062
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| |||||||||||||    || ||||||||||||||||||||||    
T  848121 ctcccctcccctcaaagatgcttgaattacactc---ccccctcttatgttaaaatatacact 848062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 6292523 - 6292583
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||| |||||||||||||| |||||||||| || | ||| |||||| |||||||||||||    
T  6292523 ctcccctcccctcaaagatgcttgaattacattcccctcccctcttaagttaaaatataca 6292583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 8628113 - 8628057
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| |||||||||||| |  | ||||||||||||||||||||||||    
T  8628113 tcccttcaaagatgcttgaattacacttttcttctctcttatgttaaaatatacact 8628057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 14094212 - 14094156
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||| | ||| ||||||||||||||| ||||||    
T  14094212 tcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatttacact 14094156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 25598515 - 25598463
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  25598515 ctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 25598463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 29726476 - 29726392
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctc--atcct---ctcttatgttaaaatatacactt 411  Q
    |||||||||||||||||||     || |||||||||||||| |||||||||||||||   ||||   |||||||||||||||||||||||    
T  29726476 atttgagtaaattacactc-----ccctcccctcaaagatgcttgaattacactctcctctcctctcctcttatgttaaaatatacactt 29726392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 30990807 - 30990867
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||  ||||||| | ||||||||||||| ||||  ||||||||||||||||||||    
T  30990807 ctcccatcctttcaaagaagcttgaattacactcccatctcctcttatgttaaaatataca 30990867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 408
Target Start/End: Complemental strand, 33969623 - 33969567
Alignment:
Q  352 catcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||| |||||||||||||   ||||||||| | ||||||||||||    
T  33969623 catcccctcaaagatgcttgaattacactcctctcctctcttgtattaaaatataca 33969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 34678610 - 34678666
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| |||||||||| ||||||||  |||| ||||||||||||||||    
T  34678610 tcccttcaaagatgcttgaattacattctcatcccttcttgtgttaaaatatacact 34678666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 34923857 - 34923912
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||| ||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  34923857 tccccttaaagatgcttgaattatactccc-tcctctcttatgttaaaatatacact 34923912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 35366335 - 35366383
Alignment:
Q  362 aagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  35366335 aagatgtttgaatcacactcccctcctctcttattttaaaatatacact 35366383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 37304950 - 37304902
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    |||||||||| ||||||||||||||| | |||| |||||||||||||||    
T  37304950 ctcaaagatgcttgaattacactctccttctcttttatgttaaaatata 37304902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 37836936 - 37836988
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||| ||||||||||||| | | |||| |||||||||||||||||    
T  37836936 ccctcaaagatgcttgaattacactccccttctctattatgttaaaatataca 37836988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 17496270 - 17496330
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||  |||||||||||||| |||| ||||  ||||||||||||||||    
T  17496270 ctcccctcccctcaaagatccttgaattacactcttatcccctct--tgttaaaatatacact 17496330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 34925494 - 34925411
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatc-----ctctcttatgttaaaatatacact 410  Q
    ||||||||||||||||||    |||| |||||||||||||| |||||||||| |||| ||     ||||||||||||||||||||||||    
T  34925494 atttgagtaaattacact----tccc-tcccctcaaagatgcttgaattacattctcctccacctctctcttatgttaaaatatacact 34925411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 37265513 - 37265568
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||| ||| |||||||||||||| ||  ||||||||||||||| |||||||||||    
T  37265513 tcaaatatgcttgaattacactcttattttctcttatgttaaaacatacactttcc 37265568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 37872933 - 37872875
Alignment:
Q  349 tcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||| |||||||||||||| ||||||||| ||| | ||| ||||||||||||||||||||    
T  37872933 tcccctcccctcaaagatgcttgaattaccctc-cctcccctcttatgttaaaatataca 37872875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 40298939 - 40298994
Alignment:
Q  359 tcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||| ||||||||||||| | | |  |||||||||||||||||||||||||    
T  40298939 tcaaagatgcttgaattacactccccttcattcttatgttaaaatatacactttcc 40298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 41312435 - 41312388
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  41312435 aaagatgcttgaattacactcccctcccctcttatgttaaaatataca 41312388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 4256574 - 4256628
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||| || ||||||| || ||| | ||||||||||||||||||||    
T  4256574 tcccctcaaagatgcttaaattacattcacattccctcttatgttaaaatataca 4256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 8297114 - 8297172
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||| ||||||| ||||||||||||  | ||| |||||| |||||||||||||||||    
T  8297114 tccccttaaagatgcttgaattacacttccctcccctcttaagttaaaatatacacttt 8297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 11140103 - 11140165
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| || ||| ||||||  ||||||||||||| | ||| ||||||||||||||||||||||    
T  11140103 ctcccgtctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacact 11140165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 17565398 - 17565344
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| || ||||||||||   ||| ||||||||||||||||||||||    
T  17565398 ccctcaaagatgcttcaattacactcctctcccctcttatgttaaaatatacact 17565344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 31740200 - 31740155
Alignment:
Q  364 gatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  31740200 gatgtttgaattacactctc-tcccctcttatattaaaatatacact 31740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 31846464 - 31846518
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||| ||||||||||||  | ||| ||||||||||||||||||||||    
T  31846464 ccctaaaagatgattgaattacacttccctcccctcttatgttaaaatatacact 31846518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 43777055 - 43776997
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    |||||||||||| |||||||||||||   | | |||||||||| |||||||||||||||    
T  43777055 ccctcaaagatgcttgaattacactccacttccctcttatgtttaaatatacactttcc 43776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 5872799 - 5872743
Alignment:
Q  354 tcccctcaaagatgtttgaattacactct-catcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||||||||||||| | |||| | |||||||||||||||||||    
T  5872799 tcccctcaaagatgcttgaattacactctacttcct-ttttatgttaaaatatacact 5872743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 6099356 - 6099413
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactttcc 414  Q
    ||||||||||| ||||||||||||  | ||  || |||||||||||||||||||||||    
T  6099356 cctcaaagatgattgaattacacttccctctccttttatgttaaaatatacactttcc 6099413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 29459317 - 29459264
Alignment:
Q  357 cctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||| ||||||||||||| | ||  ||||||||||||||||| ||||    
T  29459317 cctcaaagatgcttgaattacactcccctctcctcttatgttaaaatatccact 29459264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 44746198 - 44746243
Alignment:
Q  363 agatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||| || | | ||||||||||||||||||||    
T  44746198 agatgtttgaattacactttctttccctcttatgttaaaatataca 44746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 3076024 - 3075972
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||| ||||||||||||| | ||  ||||||| ||||||||||||||    
T  3076024 ctcaaagatgcttgaattacactcccctctcctcttatattaaaatatacact 3075972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 8443386 - 8443330
Alignment:
Q  355 cccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||||||||||| ||| ||||||||| | |   |||||||||||||||||||||||    
T  8443386 cccctcaaagatgcttgtattacactcccctatcctcttatgttaaaatatacactt 8443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 44146679 - 44146719
Alignment:
Q  366 tgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  44146679 tgtttcaattacactctcattctctcttatgtgaaaatata 44146719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 421160 - 421216
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  421160 tcccctcaaagatgtttgaattacactcccctcccctcttatgttaaaatatacact 421216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 421991 - 421934
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||| | ||| |||||||||| ||||||||||||    
T  421991 tcccctcaaagatgcttgaattacactcccttcccctcttatgtttaaatatacactt 421934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 14056 - 14119
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||| ||||||| |||||||||||||||   ||| |||||||||||||||||||||||    
T  14056 ctcccctcccatcaaagaagtttgaattacactcctctcccctcttatgttaaaatatacactt 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 733 - 795
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  733 ctcccatcccctcaaagatgcttgaattacactcccctccactcttaagttaaaatatacact 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 3415 - 3477
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||    
T  3415 ctcccctcccctcaaagatgcttgaattacacactcctcccctcttatgttaaaatatacact 3477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 411
Target Start/End: Complemental strand, 4109 - 4052
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||||||||||||| ||||||||||||| | |||  ||||||||||||||||||||||    
T  4109 tcccctcaaagatgcttgaattacactcccctcccatcttatgttaaaatatacactt 4052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 13463 - 13527
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| ||||||||||||||  |||||||||||||| ||| |||||| |||||||||||||||||    
T  13463 ctcccctcccctcaaagatgcatgaattacactctcctcccctcttaagttaaaatatacacttt 13527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 13574 - 13632
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||| |||| |||||||| | ||| |||||| ||||||||||| |||||    
T  13574 tcccctcaaagatgcttgagttacactcccctcccctcttaagttaaaatataaacttt 13632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 27070 - 27007
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| |||||||||||||   ||| |||||||||||||||||||||||    
T  27070 ctcccctcccctcaaagatgcttgaattacactcatctcccctcttatgttaaaatatacactt 27007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 26344 - 26421
Alignment:
Q  327 atttgagtaaattacactcatctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||||||||   |||  |||||||||||||| || |||||||||| | || ||||||||||| |||||||||||    
T  26344 atttgagtaaattacactc---tcc--tcccctcaaagatggttaaattacactcccttcatctcttatgtt-aaatatacact 26421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 26535 - 26484
Alignment:
Q  358 ctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacac 409  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  26535 ctcaaagatgcttgaattaccctctcattctctcttatgttaaaatatacac 26484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 59280 - 59329
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  59280 aaagatgcttgaattacactctcctcccctcttatgttaaaatatacact 59329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 10606 - 10660
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    |||||||||||||||||||||||||||| |  || ||||||||||||||||||||    
T  10606 tcccctcaaagatgtttgaattacactccccgcccctcttatgttaaaatataca 10660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 11325 - 11263
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||| ||||||  ||||||||||||| | ||| ||||||||||||||||||||||    
T  11325 ctcccctccccttaaagatacttgaattacactcccctccgctcttatgttaaaatatacact 11263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 11304 - 11358
Alignment:
Q  356 ccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||| |||||||||||| || ||| ||||||||||||||||||||||    
T  11304 ccctcaaagatgcttgaattacactttcctcccctcttatgttaaaatatacact 11358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 19714 - 19652
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||||||||||||| ||||||||||||| | ||| |||||| |||||||||||||||    
T  19714 ctcccctcccctcaaagatgcttgaattacactcccctcccctcttaagttaaaatatacact 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1192 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 167 - 230
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| ||| || |||||||||||||||||| || | ||| |||||||||||||||||||||||    
T  167 ctcccctcctcttaaagatgtttgaattacagtcccctcccctcttatgttaaaatatacactt 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 34382 - 34319
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    ||||| |||||||||||||| ||||||||| ||| | ||| |||||| ||||||||||||||||    
T  34382 ctcccctcccctcaaagatgcttgaattacgctcccctcccctcttaagttaaaatatacactt 34319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 410
Target Start/End: Complemental strand, 17195 - 17154
Alignment:
Q  369 ttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  17195 ttgaattacactcacatcccctcttatgttaaaatatacact 17154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 16492 - 16554
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| | ||||||| ||||||||||||| | |||  |||||||||||||||||||||    
T  16492 ctcccctccctttaaagatgcttgaattacactcccctcccatcttatgttaaaatatacact 16554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 2236 - 2292
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||| ||||||||| ||||||||||||| | ||| ||||||||||||||| ||||||    
T  2236 tcccttcaaagatgcttgaattacactcccctcccctcttatgttaaaatttacact 2292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 18810 - 18746
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    ||||| |||||||||| ||| ||||||||||||| | ||| |||||| |||||||| ||||||||    
T  18810 ctcccctcccctcaaaaatgcttgaattacactcccctcccctcttaagttaaaatctacacttt 18746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 11691 - 11635
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| || |||||||||| | ||| ||||||||||||| ||||||||    
T  11691 tcccctcaaagatgcttcaattacactcacctcccctcttatgttaaattatacact 11635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 410
Target Start/End: Original strand, 10981 - 11037
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    |||||||||||||| |||| ||||||| |  ||| |||||||||||||| |||||||    
T  10981 tcccctcaaagatgcttgatttacacttttctcccctcttatgttaaaacatacact 11037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 16049 - 16002
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatataca 408  Q
    ||||||||||||||||||||  | || |||||||||||||||||||||    
T  16049 aaagatgtttgaattacacttccctcatctcttatgttaaaatataca 16002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 15396 - 15338
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatata 406  Q
    ||||| |||||||||||||| ||||||||||||| | ||  ||||| ||||||||||||    
T  15396 ctcccctcccctcaaagatgcttgaattacactcccgtctcctcttttgttaaaatata 15338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 31421 - 31359
Alignment:
Q  348 ctcccatcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacact 410  Q
    ||||| |||| | ||||||| |||||||||||| || ||| || |||||||||||||||||||    
T  31421 ctcccctcccttgaaagatgcttgaattacactttcctccccttttatgttaaaatatacact 31359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 33406 - 33348
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||||||||||  ||||||||||||| | | | |||||| |||||||||||||||||    
T  33406 tcccctcaaagatacttgaattacactccccttccctcttaagttaaaatatacacttt 33348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 351288 - 351338
Alignment:
Q  361 aaagatgtttgaattacactctcatcctctcttatgttaaaatatacactt 411  Q
    |||| ||||||||||||| |||  | |||||||||||||||||||||||||    
T  351288 aaaggtgtttgaattacaatcttcttctctcttatgttaaaatatacactt 351338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Complemental strand, 351998 - 351940
Alignment:
Q  354 tcccctcaaagatgtttgaattacactctcatcctctcttatgttaaaatatacacttt 412  Q
    |||||| ||||||| || ||||||| ||   ||||||||||||||||||||||||||||    
T  351998 tccccttaaagatgcttaaattacattcctctcctctcttatgttaaaatatacacttt 351940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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