View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2640_high_33 (Length: 250)

Name: NF2640_high_33
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2640_high_33
NF2640_high_33
[»] chr4 (68 HSPs)
chr4 (15-250)||(47516193-47516408)
chr4 (117-247)||(46070528-46070657)
chr4 (117-249)||(8178242-8178376)
chr4 (117-247)||(5841784-5841916)
chr4 (117-247)||(5064660-5064792)
chr4 (135-227)||(4058750-4058842)
chr4 (123-237)||(28142637-28142753)
chr4 (117-244)||(32410343-32410472)
chr4 (117-239)||(37911899-37912023)
chr4 (135-247)||(8013094-8013206)
chr4 (140-237)||(28318434-28318529)
chr4 (117-246)||(53848482-53848606)
chr4 (138-227)||(20281629-20281718)
chr4 (23-88)||(23978259-23978324)
chr4 (117-234)||(29511442-29511559)
chr4 (138-227)||(47867917-47868006)
chr4 (117-235)||(49080272-49080392)
chr4 (135-227)||(16604871-16604963)
chr4 (21-88)||(28318561-28318628)
chr4 (138-227)||(2229285-2229374)
chr4 (138-223)||(26916363-26916448)
chr4 (135-227)||(41414636-41414727)
chr4 (136-227)||(39078193-39078283)
chr4 (200-247)||(40411750-40411797)
chr4 (22-88)||(5841923-5841989)
chr4 (22-88)||(37911826-37911892)
chr4 (22-88)||(46070664-46070730)
chr4 (138-227)||(7654655-7654744)
chr4 (138-247)||(10069735-10069844)
chr4 (13-247)||(35310747-35310981)
chr4 (135-227)||(17794566-17794658)
chr4 (117-198)||(23978169-23978252)
chr4 (135-227)||(24940400-24940492)
chr4 (32-88)||(28142765-28142821)
chr4 (135-223)||(56318099-56318187)
chr4 (22-80)||(8013241-8013299)
chr4 (135-197)||(29203541-29203603)
chr4 (113-226)||(8683332-8683445)
chr4 (138-247)||(14332798-14332907)
chr4 (22-87)||(53848409-53848474)
chr4 (135-227)||(5483303-5483395)
chr4 (135-227)||(28669026-28669117)
chr4 (124-220)||(48793660-48793756)
chr4 (22-77)||(8178394-8178449)
chr4 (137-200)||(20716217-20716280)
chr4 (23-88)||(40553712-40553777)
chr4 (15-82)||(29511380-29511446)
chr4 (117-216)||(17799170-17799271)
chr4 (117-227)||(30011952-30012062)
chr4 (145-227)||(55580715-55580797)
chr4 (162-227)||(32203275-32203340)
chr4 (135-188)||(35529707-35529760)
chr4 (15-76)||(40411036-40411097)
chr4 (145-226)||(42915575-42915656)
chr4 (135-227)||(5815504-5815596)
chr4 (138-226)||(17186822-17186909)
chr4 (135-223)||(32323291-32323379)
chr4 (188-240)||(36542894-36542946)
chr4 (13-80)||(8683475-8683542)
chr4 (180-227)||(16473828-16473875)
chr4 (13-80)||(42915443-42915509)
chr4 (165-227)||(21722707-21722769)
chr4 (144-221)||(25268523-25268600)
chr4 (13-80)||(29180537-29180603)
chr4 (13-80)||(30776609-30776675)
chr4 (13-80)||(30777416-30777482)
chr4 (15-87)||(21181080-21181152)
chr4 (15-67)||(49080190-49080242)
[»] chr5 (57 HSPs)
chr5 (117-247)||(12912307-12912438)
chr5 (135-237)||(5369053-5369155)
chr5 (16-247)||(16153358-16153568)
chr5 (118-240)||(8959658-8959782)
chr5 (140-247)||(1144503-1144610)
chr5 (117-236)||(3463839-3463959)
chr5 (15-202)||(10153985-10154152)
chr5 (129-247)||(5736252-5736372)
chr5 (15-88)||(8959577-8959650)
chr5 (117-247)||(8506454-8506580)
chr5 (117-227)||(42273666-42273776)
chr5 (15-88)||(6391806-6391879)
chr5 (138-227)||(11261916-11262005)
chr5 (138-227)||(37522621-37522710)
chr5 (135-227)||(20644051-20644143)
chr5 (135-226)||(19413178-19413269)
chr5 (138-227)||(6686424-6686514)
chr5 (22-88)||(8506381-8506447)
chr5 (137-247)||(30703640-30703750)
chr5 (15-88)||(1144648-1144720)
chr5 (158-247)||(29307199-29307288)
chr5 (136-227)||(20039140-20039231)
chr5 (138-227)||(43589994-43590083)
chr5 (162-247)||(18718643-18718728)
chr5 (135-208)||(38280884-38280957)
chr5 (117-240)||(28907085-28907210)
chr5 (117-240)||(28943480-28943605)
chr5 (22-88)||(12912445-12912511)
chr5 (138-227)||(37562793-37562883)
chr5 (135-225)||(38130150-38130240)
chr5 (15-88)||(29307341-29307413)
chr5 (135-220)||(32111039-32111124)
chr5 (146-227)||(34425378-34425459)
chr5 (136-226)||(6391907-6391997)
chr5 (135-229)||(41625541-41625634)
chr5 (15-76)||(28907005-28907066)
chr5 (15-76)||(28943400-28943461)
chr5 (151-227)||(5984140-5984216)
chr5 (135-210)||(104263-104338)
chr5 (129-227)||(8225492-8225591)
chr5 (135-226)||(25840901-25840992)
chr5 (166-229)||(43454353-43454416)
chr5 (135-217)||(4463397-4463479)
chr5 (118-195)||(5659584-5659664)
chr5 (135-190)||(9957488-9957542)
chr5 (13-80)||(25840779-25840846)
chr5 (165-247)||(32432319-32432402)
chr5 (22-81)||(35275383-35275442)
chr5 (30-76)||(3103489-3103535)
chr5 (15-80)||(3463974-3464040)
chr5 (135-197)||(12792839-12792900)
chr5 (164-222)||(39505270-39505328)
chr5 (13-80)||(13146663-13146729)
chr5 (162-227)||(31690652-31690717)
chr5 (13-80)||(31690779-31690845)
chr5 (164-228)||(24439636-24439700)
chr5 (146-198)||(32017751-32017803)
[»] chr1 (86 HSPs)
chr1 (138-247)||(16688176-16688285)
chr1 (117-247)||(45840078-45840209)
chr1 (118-238)||(5950457-5950579)
chr1 (117-247)||(37538826-37538958)
chr1 (117-247)||(7397723-7397855)
chr1 (140-247)||(50176564-50176671)
chr1 (117-247)||(25185315-25185448)
chr1 (124-247)||(30701397-30701522)
chr1 (117-239)||(5858391-5858515)
chr1 (5-247)||(35366215-35366437)
chr1 (117-247)||(44510231-44510363)
chr1 (117-246)||(41063758-41063890)
chr1 (138-247)||(2126078-2126187)
chr1 (162-239)||(8889717-8889794)
chr1 (113-226)||(33431574-33431687)
chr1 (117-241)||(15912215-15912340)
chr1 (124-227)||(43667335-43667438)
chr1 (135-225)||(32624039-32624129)
chr1 (135-227)||(12448999-12449091)
chr1 (135-227)||(15959672-15959764)
chr1 (135-227)||(39555618-39555710)
chr1 (144-227)||(11241073-11241156)
chr1 (22-88)||(5858522-5858588)
chr1 (22-88)||(51339049-51339115)
chr1 (22-88)||(51840647-51840713)
chr1 (135-227)||(6785493-6785585)
chr1 (15-76)||(37538746-37538807)
chr1 (135-227)||(6786875-6786967)
chr1 (135-227)||(28120787-28120879)
chr1 (124-227)||(28016778-28016881)
chr1 (124-227)||(33369577-33369679)
chr1 (136-227)||(45226176-45226267)
chr1 (185-247)||(13352181-13352243)
chr1 (22-88)||(41063685-41063751)
chr1 (117-227)||(46543001-46543111)
chr1 (135-225)||(47014525-47014615)
chr1 (15-88)||(7397644-7397716)
chr1 (138-227)||(24190509-24190598)
chr1 (117-240)||(16661532-16661657)
chr1 (117-200)||(13351697-13351782)
chr1 (135-209)||(32318610-32318684)
chr1 (124-226)||(3076319-3076423)
chr1 (15-88)||(34102123-34102195)
chr1 (138-227)||(40718718-40718807)
chr1 (126-226)||(44148869-44148967)
chr1 (32-88)||(15912152-15912208)
chr1 (135-227)||(32983204-32983294)
chr1 (170-246)||(46803684-46803760)
chr1 (164-227)||(2246046-2246109)
chr1 (21-88)||(5950382-5950449)
chr1 (135-210)||(50369999-50370073)
chr1 (129-195)||(13136617-13136683)
chr1 (145-227)||(35691440-35691522)
chr1 (135-225)||(42965850-42965938)
chr1 (15-81)||(43359627-43359693)
chr1 (15-76)||(16661452-16661513)
chr1 (135-199)||(6787050-6787114)
chr1 (15-67)||(13351617-13351669)
chr1 (135-227)||(39932604-39932696)
chr1 (136-200)||(47600098-47600162)
chr1 (139-247)||(52841457-52841565)
chr1 (32-76)||(52841609-52841653)
chr1 (135-210)||(16854177-16854252)
chr1 (136-234)||(43765332-43765431)
chr1 (164-227)||(46818534-46818597)
chr1 (136-218)||(51338938-51339021)
chr1 (46-88)||(25185455-25185497)
chr1 (124-227)||(37735415-37735520)
chr1 (135-247)||(1820452-1820564)
chr1 (144-229)||(30221771-30221856)
chr1 (135-184)||(34102048-34102097)
chr1 (162-227)||(35884271-35884336)
chr1 (15-80)||(46804690-46804755)
chr1 (139-247)||(3861707-3861815)
chr1 (135-219)||(10558796-10558880)
chr1 (136-247)||(51840507-51840619)
chr1 (144-239)||(13291835-13291930)
chr1 (135-222)||(24728664-24728751)
chr1 (43-82)||(37192909-37192948)
chr1 (164-227)||(52984999-52985062)
chr1 (22-88)||(13050294-13050360)
chr1 (15-73)||(39151317-39151375)
chr1 (14-68)||(50176447-50176501)
chr1 (118-176)||(39151243-39151303)
chr1 (191-239)||(39151194-39151242)
chr1 (13-80)||(40219989-40220054)
[»] chr8 (63 HSPs)
chr8 (117-247)||(41362320-41362452)
chr8 (126-247)||(8745607-8745730)
chr8 (118-247)||(4038895-4039025)
chr8 (117-247)||(17336757-17336889)
chr8 (117-247)||(17713238-17713370)
chr8 (113-247)||(38072174-38072310)
chr8 (117-237)||(8673396-8673518)
chr8 (112-246)||(2628178-2628314)
chr8 (117-208)||(26954444-26954537)
chr8 (117-247)||(17314845-17314977)
chr8 (117-222)||(25195085-25195191)
chr8 (135-227)||(36190807-36190899)
chr8 (145-246)||(28497152-28497253)
chr8 (135-227)||(15957944-15958036)
chr8 (135-227)||(31734150-31734242)
chr8 (135-227)||(34890207-34890299)
chr8 (138-227)||(7022436-7022525)
chr8 (138-227)||(26483570-26483659)
chr8 (135-227)||(7858563-7858655)
chr8 (135-227)||(8711912-8712003)
chr8 (135-227)||(43216380-43216472)
chr8 (22-88)||(17713165-17713231)
chr8 (135-227)||(13143978-13144070)
chr8 (15-88)||(28497665-28497738)
chr8 (117-247)||(29147250-29147382)
chr8 (135-227)||(13143799-13143891)
chr8 (32-88)||(41362459-41362515)
chr8 (22-88)||(2628316-2628382)
chr8 (22-88)||(25195198-25195264)
chr8 (136-225)||(5217428-5217517)
chr8 (162-247)||(6401682-6401767)
chr8 (135-248)||(35456037-35456149)
chr8 (135-220)||(35525622-35525707)
chr8 (135-227)||(41086419-41086511)
chr8 (22-81)||(26954551-26954610)
chr8 (153-247)||(8712577-8712671)
chr8 (15-77)||(17314765-17314827)
chr8 (124-247)||(27819681-27819806)
chr8 (135-224)||(30575870-30575960)
chr8 (15-80)||(5217327-5217392)
chr8 (15-88)||(27819594-27819667)
chr8 (135-227)||(16358145-16358236)
chr8 (136-227)||(24892874-24892968)
chr8 (135-222)||(29920306-29920393)
chr8 (13-79)||(4047075-4047140)
chr8 (165-227)||(8709819-8709881)
chr8 (22-80)||(27740549-27740607)
chr8 (166-227)||(4480841-4480902)
chr8 (23-88)||(8712463-8712528)
chr8 (23-88)||(12893926-12893990)
chr8 (22-67)||(14576315-14576360)
chr8 (32-81)||(41791619-41791668)
chr8 (135-227)||(28348646-28348737)
chr8 (165-215)||(14693434-14693484)
chr8 (42-88)||(34899887-34899933)
chr8 (15-56)||(4039066-4039107)
chr8 (15-88)||(8673317-8673389)
chr8 (32-81)||(8745535-8745584)
chr8 (13-80)||(27752521-27752587)
chr8 (165-210)||(33563561-33563606)
chr8 (135-200)||(34158351-34158416)
chr8 (162-227)||(34713591-34713656)
chr8 (135-191)||(3642039-3642094)
[»] chr2 (51 HSPs)
chr2 (117-243)||(32010119-32010247)
chr2 (117-247)||(26998334-26998466)
chr2 (118-247)||(38071014-38071144)
chr2 (118-234)||(32273689-32273807)
chr2 (118-247)||(4891649-4891781)
chr2 (13-247)||(8701517-8701751)
chr2 (22-88)||(9709458-9709524)
chr2 (117-247)||(44442148-44442281)
chr2 (135-227)||(45660402-45660494)
chr2 (135-236)||(14874000-14874101)
chr2 (117-231)||(20380140-20380256)
chr2 (15-88)||(38070933-38071006)
chr2 (117-224)||(8032702-8032812)
chr2 (112-237)||(9709525-9709652)
chr2 (135-225)||(28858346-28858436)
chr2 (135-225)||(33198664-33198754)
chr2 (138-227)||(3201366-3201455)
chr2 (15-88)||(26998254-26998327)
chr2 (15-88)||(32273608-32273681)
chr2 (135-220)||(40584436-40584521)
chr2 (138-227)||(41528296-41528385)
chr2 (135-227)||(6110230-6110322)
chr2 (135-227)||(19264137-19264229)
chr2 (135-227)||(45085294-45085386)
chr2 (15-88)||(20380060-20380133)
chr2 (138-227)||(28599179-28599268)
chr2 (135-227)||(11617061-11617153)
chr2 (33-88)||(8032819-8032874)
chr2 (124-226)||(25572070-25572173)
chr2 (135-227)||(35115834-35115927)
chr2 (138-227)||(35517163-35517252)
chr2 (135-227)||(12938279-12938371)
chr2 (122-226)||(40808752-40808855)
chr2 (135-222)||(29524077-29524164)
chr2 (22-88)||(33933069-33933136)
chr2 (22-88)||(16179850-16179916)
chr2 (22-88)||(32010046-32010112)
chr2 (15-88)||(4891789-4891862)
chr2 (117-237)||(11030951-11031066)
chr2 (135-227)||(24204560-24204652)
chr2 (22-81)||(11031080-11031139)
chr2 (165-208)||(16494976-16495019)
chr2 (135-221)||(30830633-30830719)
chr2 (144-226)||(33677529-33677611)
chr2 (165-227)||(43415468-43415530)
chr2 (179-247)||(33932934-33933002)
chr2 (23-77)||(921707-921762)
chr2 (145-227)||(6765964-6766046)
chr2 (164-222)||(9864755-9864813)
chr2 (162-227)||(18833941-18834006)
chr2 (166-227)||(35022967-35023027)
[»] chr3 (80 HSPs)
chr3 (15-247)||(22479025-22479237)
chr3 (117-240)||(21214256-21214381)
chr3 (117-247)||(7886588-7886720)
chr3 (117-247)||(8096989-8097121)
chr3 (117-247)||(10114926-10115058)
chr3 (15-247)||(22455979-22456191)
chr3 (117-247)||(10252026-10252158)
chr3 (117-247)||(30454696-30454827)
chr3 (5-247)||(34194813-34195035)
chr3 (117-224)||(16032981-16033090)
chr3 (117-247)||(46918184-46918316)
chr3 (117-247)||(10014284-10014416)
chr3 (117-247)||(47443945-47444076)
chr3 (117-247)||(2994386-2994521)
chr3 (117-247)||(38401395-38401531)
chr3 (15-88)||(49583900-49583973)
chr3 (135-240)||(6784359-6784464)
chr3 (138-227)||(23311584-23311673)
chr3 (117-247)||(25242149-25242281)
chr3 (135-223)||(579133-579221)
chr3 (135-227)||(6438124-6438216)
chr3 (135-227)||(36546583-36546675)
chr3 (135-227)||(36561640-36561732)
chr3 (145-227)||(30189622-30189704)
chr3 (117-227)||(35963173-35963285)
chr3 (136-227)||(11054302-11054394)
chr3 (135-227)||(46711649-46711740)
chr3 (135-247)||(50651008-50651120)
chr3 (21-88)||(48291763-48291830)
chr3 (22-88)||(6784275-6784340)
chr3 (22-88)||(7886727-7886793)
chr3 (22-88)||(30454834-30454900)
chr3 (15-88)||(10251946-10252019)
chr3 (178-247)||(17587783-17587852)
chr3 (135-228)||(19464116-19464209)
chr3 (15-88)||(23209390-23209463)
chr3 (138-227)||(37042408-37042497)
chr3 (134-227)||(37075000-37075093)
chr3 (13-222)||(2927208-2927417)
chr3 (22-88)||(2994528-2994594)
chr3 (15-81)||(38401315-38401381)
chr3 (138-227)||(28875450-28875539)
chr3 (118-204)||(48291838-48291926)
chr3 (135-227)||(6075122-6075214)
chr3 (151-227)||(9264608-9264684)
chr3 (135-227)||(14752199-14752291)
chr3 (32-88)||(17587666-17587722)
chr3 (139-247)||(23209251-23209359)
chr3 (135-227)||(47864232-47864324)
chr3 (135-227)||(53270276-53270368)
chr3 (136-227)||(7866474-7866565)
chr3 (34-88)||(8097128-8097182)
chr3 (15-81)||(21214176-21214242)
chr3 (35-88)||(10014224-10014277)
chr3 (15-88)||(10114847-10114919)
chr3 (43-88)||(29676557-29676602)
chr3 (23-88)||(32070189-32070254)
chr3 (15-88)||(44566898-44566970)
chr3 (147-227)||(23910504-23910584)
chr3 (24-88)||(27876024-27876088)
chr3 (113-201)||(54725627-54725710)
chr3 (136-227)||(29235229-29235320)
chr3 (164-227)||(41476327-41476390)
chr3 (192-247)||(49584049-49584103)
chr3 (15-77)||(12128791-12128852)
chr3 (135-221)||(20847265-20847351)
chr3 (15-88)||(47444083-47444159)
chr3 (15-81)||(54725720-54725786)
chr3 (140-201)||(34722622-34722683)
chr3 (162-227)||(36189000-36189065)
chr3 (135-227)||(26724982-26725074)
chr3 (162-246)||(34105598-34105682)
chr3 (135-195)||(54464918-54464978)
chr3 (23-89)||(41935564-41935630)
chr3 (42-87)||(7615032-7615077)
chr3 (162-227)||(31126273-31126338)
chr3 (166-222)||(3972347-3972402)
chr3 (166-222)||(3997476-3997531)
chr3 (135-227)||(31836960-31837052)
chr3 (162-246)||(51309474-51309558)
[»] scaffold0565 (1 HSPs)
scaffold0565 (117-247)||(5887-6019)
[»] chr7 (39 HSPs)
chr7 (117-247)||(38260333-38260465)
chr7 (117-247)||(35887980-35888112)
chr7 (117-247)||(39170551-39170683)
chr7 (138-227)||(46760288-46760377)
chr7 (117-226)||(31768994-31769105)
chr7 (135-227)||(6191082-6191174)
chr7 (135-227)||(18102567-18102659)
chr7 (15-86)||(39170472-39170543)
chr7 (138-227)||(14805910-14805998)
chr7 (138-227)||(15252904-15252992)
chr7 (138-227)||(19912800-19912889)
chr7 (135-236)||(22632126-22632227)
chr7 (138-227)||(25737658-25737747)
chr7 (138-227)||(45485995-45486084)
chr7 (118-246)||(3777996-3778126)
chr7 (162-240)||(10248592-10248671)
chr7 (22-89)||(35888118-35888185)
chr7 (136-249)||(20123689-20123802)
chr7 (23-88)||(31769112-31769177)
chr7 (138-221)||(35923292-35923375)
chr7 (135-221)||(25944613-25944699)
chr7 (135-227)||(12632375-12632467)
chr7 (22-77)||(22369170-22369225)
chr7 (135-221)||(4910670-4910756)
chr7 (117-202)||(24151638-24151724)
chr7 (35-81)||(38260273-38260319)
chr7 (136-210)||(9158128-9158201)
chr7 (153-234)||(35068872-35068954)
chr7 (136-227)||(47557630-47557723)
chr7 (23-76)||(25651422-25651475)
chr7 (13-88)||(39348720-39348794)
chr7 (124-226)||(47779628-47779732)
chr7 (136-200)||(4069041-4069105)
chr7 (15-67)||(24151750-24151802)
chr7 (162-246)||(33153098-33153182)
chr7 (45-88)||(3777945-3777988)
chr7 (117-227)||(35084091-35084203)
chr7 (162-227)||(40560441-40560506)
chr7 (135-235)||(29713226-29713326)
[»] chr6 (28 HSPs)
chr6 (117-239)||(16524395-16524518)
chr6 (117-240)||(4032002-4032127)
chr6 (117-240)||(4987958-4988083)
chr6 (122-237)||(16013454-16013571)
chr6 (117-238)||(3888442-3888565)
chr6 (138-227)||(35129086-35129176)
chr6 (15-88)||(3888362-3888435)
chr6 (113-247)||(7274887-7275023)
chr6 (138-227)||(11082277-11082366)
chr6 (138-227)||(21542458-21542547)
chr6 (118-247)||(15830711-15830842)
chr6 (15-81)||(1130454-1130520)
chr6 (138-247)||(34177653-34177762)
chr6 (140-227)||(3095752-3095838)
chr6 (23-81)||(5300751-5300809)
chr6 (15-88)||(5822171-5822245)
chr6 (15-88)||(4987878-4987951)
chr6 (15-83)||(5881908-5881976)
chr6 (166-245)||(16655254-16655333)
chr6 (162-247)||(16870804-16870889)
chr6 (22-82)||(15830637-15830697)
chr6 (15-77)||(4031922-4031984)
chr6 (23-76)||(13854852-13854905)
chr6 (113-201)||(5300658-5300741)
chr6 (135-227)||(30794224-30794316)
chr6 (144-234)||(12461454-12461544)
chr6 (43-81)||(16524343-16524381)
chr6 (13-80)||(30949067-30949133)
[»] scaffold0330 (2 HSPs)
scaffold0330 (117-247)||(3185-3317)
scaffold0330 (15-88)||(3105-3178)
[»] scaffold0010 (1 HSPs)
scaffold0010 (138-247)||(160931-161040)
[»] scaffold0774 (1 HSPs)
scaffold0774 (135-227)||(3460-3552)
[»] scaffold0300 (1 HSPs)
scaffold0300 (138-227)||(605-694)
[»] scaffold0045 (1 HSPs)
scaffold0045 (138-227)||(77997-78086)
[»] scaffold0442 (1 HSPs)
scaffold0442 (135-247)||(10082-10194)
[»] scaffold0132 (2 HSPs)
scaffold0132 (137-227)||(1051-1141)
scaffold0132 (137-227)||(9011-9101)
[»] scaffold0062 (1 HSPs)
scaffold0062 (135-247)||(44783-44895)
[»] scaffold0018 (1 HSPs)
scaffold0018 (138-221)||(154901-154984)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-226)||(157831-157922)
[»] scaffold0111 (1 HSPs)
scaffold0111 (143-227)||(40224-40308)
[»] scaffold0182 (1 HSPs)
scaffold0182 (15-68)||(22718-22771)
[»] scaffold0012 (1 HSPs)
scaffold0012 (138-224)||(160290-160376)


Alignment Details
Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 47516408 - 47516193
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattataa 114  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||                     |||| ||    
T  47516408 tataagcaaaaaagaccaacttttattacatttaattatgttgtttcaaaaaattatcttttccaaaggaaa---------------------atta-aa 47516331  T
Q  115 tacaaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaata 212  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  47516330 tacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatttcaaagata 47516231  T
Q  213 acacaaaaaactatattacaaactactatgttttactt 250  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47516230 acacaaaaaactatattacaaactactatgttttactt 47516193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 46070657 - 46070528
Alignment:
Q  117 caaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac 216  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||    
T  46070657 caaagtgcattcaatttactctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagacaacac 46070558  T
Q  217 aaaaaactatattacaaactactatgtttta 247  Q
     ||||||||| ||||||||||||||||||||    
T  46070557 -aaaaactatgttacaaactactatgtttta 46070528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 8178376 - 8178242
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| |||||||  |||||| |||||| ||||| |||||||||||||||||| |||||    
T  8178376 caaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatttcaaagataac 8178277  T
Q  215 acaaaaaactatattacaaactactatgttttact 249  Q
    |||  ||||||| ||||||||||||||||||||||    
T  8178276 acatgaaactatgttacaaactactatgttttact 8178242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 5841916 - 5841784
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||| | ||||||||||||  |||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||| |||||||||  |||||    
T  5841916 caaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatttcaaggataac 5841817  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| || |||||||||||| ||||    
T  5841816 acaagaaactatgttgcaaactactatgcttta 5841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 5064792 - 5064660
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||| ||||||||  |||||| || |||| |||| || ||||||||||| |||||| ||||||| |||||||||||||||| |||||    
T  5064792 caaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatttcaaagataac 5064693  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||| ||| ||||||| ||||||||||||    
T  5064692 acaaaaaattatgttacaaattactatgtttta 5064660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 4058750 - 4058842
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  4058750 ctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 4058842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 28142753 - 28142637
Alignment:
Q  123 gcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaa 220  Q
    ||||||||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| || ||||||||||||||||| ||| |||||||||||    
T  28142753 gcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttattttaaagataacacaaaa 28142654  T
Q  221 aactatattacaaacta 237  Q
    || ||| ||||||||||    
T  28142653 aattatgttacaaacta 28142637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 244
Target Start/End: Original strand, 32410343 - 32410472
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||| ||| ||||||||||||||   ||||| || ||||  ||| | |||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  32410343 caaagtgtattcaatttgctctcttttttattttctctataattaactagcaatgaaaattatttttacatcttcctataaaacttatttcaaagataac 32410442  T
Q  215 acaaaaaactatattacaaactactatgtt 244  Q
    |||||||||| ||||| |||||||||||||    
T  32410443 acaaaaaactttattataaactactatgtt 32410472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 37911899 - 37912023
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||   ||||| || |||| |||| |||||||||||||| |||||| | || ||||||||||||||| ||| |||||    
T  37911899 caaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttattttaaagataac 37911998  T
Q  215 acaaaaaactatattacaaactact 239  Q
    |||||||||||| ||| ||||||||    
T  37911999 acaaaaaactatgttataaactact 37912023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 8013206 - 8013094
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||||||||| || || || || ||||||| ||||||| |||||| |||| |||| |||||||||||||  ||||||||| ||||||| |||||||    
T  8013206 ctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactatgttacaaa 8013107  T
Q  235 ctactatgtttta 247  Q
    |||||||||||||    
T  8013106 ctactatgtttta 8013094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 28318529 - 28318434
Alignment:
Q  140 tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    ||||||||| || |||| |||| |||||||||||||| |||||| ||||||||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  28318529 tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa--ttatttcaaagataacacaaaaaactatgttacaaacta 28318434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 53848482 - 53848606
Alignment:
Q  117 caaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||       | ||||||| |||||| ||||||||||||| |||||||||  |||||    
T  53848482 caaagtgcattcaatttgctttctctttcattttttcaataaccaa-------ttaaaattgtttttacgtcttcctataaaaattatttcaaggataac 53848574  T
Q  215 acaaaaaactatattacaaactactatgtttt 246  Q
    |||| ||||||| || ||||||||||||||||    
T  53848575 acaagaaactatgttgcaaactactatgtttt 53848606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 20281629 - 20281718
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  20281629 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 20281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 23978324 - 23978259
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23978324 aaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaat 23978259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 29511442 - 29511559
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  |||||| ||  ||| ||||   |||||||||||| |||||| |||||||||||||||||||| ||| |||||    
T  29511442 caaagtgcattcaatttgctctctttttcattttctctgtaatcaact--caatgaaaattgtttttacatcttcctataaaacttattttaaagataac 29511539  T
Q  215 acaaaaaactatattacaaa 234  Q
    |||||||||||| |||||||    
T  29511540 acaaaaaactatgttacaaa 29511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 47867917 - 47868006
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  47867917 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 47868006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 49080272 - 49080392
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||| |||||||  ||||||  |  ||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||     
T  49080272 caaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataag 49080371  T
Q  215 acaaaaaactatattacaaac 235  Q
    |||||||| ||| ||||||||    
T  49080372 acaaaaaattatgttacaaac 49080392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 16604963 - 16604871
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| ||||| || | ||||||||||||| ||| || |||||||||||||||| ||||||| | ||||||||||||||||    
T  16604963 ctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 16604871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 28318628 - 28318561
Alignment:
Q  21 caaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28318628 caaaaaaaactaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 28318561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 2229285 - 2229374
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||| ||||||| |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  2229285 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 2229374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 26916363 - 26916448
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    |||||||||||||| |||||||| | ||||| ||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||    
T  26916363 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaac 26916448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 41414727 - 41414636
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||||| ||| ||| | ||||| ||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  41414727 ctctctttcattttttca-taatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 41414636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 39078193 - 39078283
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||||||||| || | ||||||||||||| |||||| |||| ||||||||||| || |||| | ||||||||||||||||    
T  39078193 tctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ctataaaactttttccaaagaaaacacaaaaaactata 39078283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 40411750 - 40411797
Alignment:
Q  200 tatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40411750 tatttcaaaaataacacaaaaaactatattacaaactactatgtttta 40411797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 5841989 - 5841923
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| |||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  5841989 aaaaaagattaacttttatcatatttagttatattgtttcaaaaaattatcttttctaaagaaaaat 5841923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 37911826 - 37911892
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  37911826 aaaaaagactaaattttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaat 37911892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 46070730 - 46070664
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  46070730 aaaaaagaccaatttttatcatatttaattatgttgtttgaaaaaattatcttttccaaaggaaaat 46070664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 7654655 - 7654744
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||| ||| | ||||||||||||| |||||  |||||||||||||||| || |||| | ||||||||||||||||    
T  7654655 tctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaaactata 7654744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 10069735 - 10069844
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    ||||||| |||||| |||||||| | ||||||||||||| |||||| |||| ||||||||||| |||| || | || ||||||||||||| |||||| |     
T  10069735 tctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcgaagaaaatacaaaaaactatactacaaattc 10069834  T
Q  238 ctatgtttta 247  Q
     |||||||||    
T  10069835 ttatgtttta 10069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 35310981 - 35310747
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattat 112  Q
    ||||||| |||||||||| |||||||||||||||||||  |||| ||| ||||||| ||||||| |||  |||| |  | |    |||| |  ||||||     
T  35310981 aatataagcaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatctttttcaataaaaacttttgtttattctcatg-aaatta- 35310884  T
Q  113 aatacaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    |||||||| | |||||||||| |||||| |  ||||||||| |||||||| | ||||||||||||| |||||| |||| | || |||||||||  ||| |    
T  35310883 aatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccatgaaacttattctaaaga 35310784  T
Q  211 taacacaaaaaactatattacaaactactatgtttta 247  Q
     |||||||||||||||  |||||| |  |||||||||    
T  35310783 aaacacaaaaaactatgctacaaattcttatgtttta 35310747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 17794658 - 17794566
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| || |||||| |||| ||| | ||||||||||||| |||||| ||||||||||||| |||||||||| | ||| ||||||||||||    
T  17794658 ctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaatttatttcaaagaaaacgcaaaaaactata 17794566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 23978252 - 23978169
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaac 198  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| ||||||||||||||    
T  23978252 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 24940400 - 24940492
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || |||||||| |||||| |||||||| |||||| ||||| |||||||||| || |||| | || |||||||||||||    
T  24940400 ctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaactttttccaaagaaaatacaaaaaactata 24940492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 28142821 - 28142765
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28142821 aacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 28142765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 56318187 - 56318099
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    ||||||||||||||||| |||||||| | | ||||||||||| |||||| |||||||||||| ||| || |||| | ||||||||||||    
T  56318187 ctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctataaacctttttccaaagaaaacacaaaaaac 56318099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 8013299 - 8013241
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  8013299 aaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaa 8013241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 29203541 - 29203603
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaa 197  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||    
T  29203541 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 29203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 8683445 - 8683332
Alignment:
Q  113 aatacaaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaata 212  Q
    |||||||| | |||||||||| |||||||| |||||||| ||||||||   ||||||||||||  |||||| | || | || ||||||||| |||| | |    
T  8683445 aatacaaattacatttaattttctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttattccaaagaaa 8683346  T
Q  213 acacaaaaaactat 226  Q
    ||||||||||||||    
T  8683345 acacaaaaaactat 8683332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 14332798 - 14332907
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    |||||||||||||  ||||||||   ||||| ||||||| |||||| |||||||||||||||| || |||| | |||||||||||| ||||| |||| |     
T  14332798 tctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaaccatattccaaattc 14332897  T
Q  238 ctatgtttta 247  Q
     |||||||||    
T  14332898 ttatgtttta 14332907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 53848409 - 53848474
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaa 87  Q
    ||||||||| ||||||||| | |||||||||| |||||||||||||| ||||||| ||||||||||    
T  53848409 aaaaaagaccaacttttatcaaatttaattatattgtttcaaaaaatcatctttttcaaagaaaaa 53848474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 5483395 - 5483303
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||| || |||||||  | ||||||||||||| |||||| ||||||||| |||||||||| ||| | ||||||||||| ||||    
T  5483395 ctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttattttaaagaaaacacaaaaaattata 5483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 28669117 - 28669026
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||||| |||| || ||||||||||||||| |||||| | |||||||||||| | ||  ||| | ||||||||||||||||    
T  28669117 ctctctttcattttttca-taactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaactata 28669026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 48793756 - 48793660
Alignment:
Q  124 catttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaa 220  Q
    |||||||||| |||||||| |||||||  ||||||||   ||||||||||||| |||||| |||||| || ||||||||| |||| | |||||||||    
T  48793756 catttaattttctctcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaa 48793660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 8178449 - 8178394
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||    
T  8178449 aaaaaagaccaacttttatcatatttaattatattgtttcaaaaaattatattttc 8178394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 20716217 - 20716280
Alignment:
Q  137 ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactt 200  Q
    ||||||||||||||| |||||||| | ||||||||||||| |||||| |||| |||||||||||    
T  20716217 ctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 20716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 40553712 - 40553777
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| ||| ||||| ||||||||||||||| ||| ||||||| |||||||||||||| ||||    
T  40553712 aaaaagaccaacatttatcatatttaattatgttatttaaaaaaatcatcttttccaaagagaaat 40553777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 29511380 - 29511446
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaag 82  Q
    ||||| ||||||| || ||||||||| ||||||| ||||||| ||||||||||||||||||| |||||    
T  29511380 tataagcaaaaaatacaaacttttatcatattta-ttatgttttttcaaaaaattatcttttgcaaag 29511446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 17799271 - 17799170
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| ||||||||||||| ||||  | ||||||| || ||||| || ||||||||||||||| |||||| |||||| |||||||| ||| ||| || |||    
T  17799271 caaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaagaagaac 17799172  T
Q  215 ac 216  Q
    ||    
T  17799171 ac 17799170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 30012062 - 30011952
Alignment:
Q  117 caaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac 216  Q
    |||| |||||| |||||| ||| ||| ||||| || ||||  |  ||||||||| ||||| |||||| |||| | || ||||||||| ||||||||||||    
T  30012062 caaattgcattcaatttgttcttttttattttctccataataattaaccaatgataattgtttttacatctttccatgaaacttattccaaaaataacac 30011963  T
Q  217 aaaaaactata 227  Q
    |||||| ||||    
T  30011962 aaaaaattata 30011952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 55580715 - 55580797
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| ||||| || | ||||||||||||| |||||| |||||||||| ||||| || |||| | |||| |||||||||||    
T  55580715 ttttttccataactaatagccaatgaaaattgtttttacatcttcctatacaactttttccaaagaaaacaaaaaaaactata 55580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 32203275 - 32203340
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| |||||  |||||| ||||||||||||||||| | |  |||||||||||||    
T  32203275 aaccaatgaaaattgtttttatatcttcccataaaacttatttcaaagaaacaacaaaaaactata 32203340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 35529707 - 35529760
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttctt 188  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| ||||    
T  35529707 ctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 40411036 - 40411097
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||||||||||| || ||||||||| ||||||||||| ||| ||| |||||| ||||||||    
T  40411036 tataaacaaaaaaaaccaacttttatcatatttaattaagtttttttaaaaaaatatctttt 40411097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 42915575 - 42915656
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    ||||||| ||||||||   ||||||||||||| |||||| |||| | || ||||||||| |||| | |||||||||||||||    
T  42915575 ttttttccataaccaattgccaatgaaaattgtttttacatctttccatgaaacttattccaaagaaaacacaaaaaactat 42915656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 5815504 - 5815596
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| | ||||||| |||| ||| |  |||| ||||||  |||||| |||||  ||||||||||||||||| | ||||||||||||||||    
T  5815504 ctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttatttcaaagaaaacacaaaaaactata 5815596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 17186909 - 17186822
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    |||||||||||||| |||||||| | ||||||||| ||  |||||| |||||||||||||   |||||||| | || ||||||||||||    
T  17186909 tctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaaa-aaatttcaaagaaaatacaaaaaactat 17186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 32323379 - 32323291
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    ||||||| |||||| ||||||| |||    |||||||||||| |||||| |||||| ||||| ||||||| ||| | ||||||||||||    
T  32323379 ctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccataaatcttattttaaagaaaacacaaaaaac 32323291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 36542894 - 36542946
Alignment:
Q  188 tcctataaaacttatttcaaaaataacacaaaaaactatattacaaactacta 240  Q
    ||||||||||||||||||||  ||||||||||||||| | || ||||||||||    
T  36542894 tcctataaaacttatttcaaggataacacaaaaaactttgttgcaaactacta 36542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 8683542 - 8683475
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||| |||||||||| |||||||||| ||||||||  |||| ||  ||||||| |||||||||||    
T  8683542 aatataagcaaaaaagacaaacttttattctatttaatcttgtttttaaaaaaaatcatcttttccaa 8683475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 16473828 - 16473875
Alignment:
Q  180 ttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 16473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 42915443 - 42915509
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||| |||||||||| |||||||||||||||||||  |||| ||| ||||||| || ||||||||    
T  42915443 aatataagcaaaaaagacaaacttttattatatttaatcttgtt-tttaaaaaaatcatattttccaa 42915509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 21722769 - 21722707
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||  |||||| ||||||||||||||||||| |||| | |||| |||| ||||||    
T  21722769 caatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactata 21722707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 25268523 - 25268600
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    ||||| || |||||||| ||||||||||||||  ||||| |||||| | | |||||||||||||  | ||||||||||    
T  25268523 attttctccataaccaataaccaatgaaaattatttttatttcttcttgtgaaacttatttcaagtagaacacaaaaa 25268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 29180603 - 29180537
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    ||||||| |||||||||| |||||||||  ||||  |||||||| ||||||| ||||||||||||||||    
T  29180603 aatataagcaaaaaagacaaacttttatgttatt--attatgttttttcaaagaaattatcttttccaa 29180537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 30776675 - 30776609
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    ||||||| |||||||||| |||||||||  ||||  |||||||| ||||||| ||||||||||||||||    
T  30776675 aatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaa 30776609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 30777416 - 30777482
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    ||||||| |||||||||| |||||||||  ||||  |||||||| ||||||| ||||||||||||||||    
T  30777416 aatataagcaaaaaagaccaacttttatgttatt--attatgttttttcaaagaaattatcttttccaa 30777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 21181152 - 21181080
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaa 87  Q
    |||||| ||||||||| || ||||||  ||||||||||||||| ||  |||| | |||||||||||| |||||    
T  21181152 tataaataaaaaagacaaatttttatcctatttaattatgttggtttcaaaagtcatcttttccaaacaaaaa 21181080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 49080190 - 49080242
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaa 67  Q
    ||||| |||||||||  ||||||||| ||||||||||||||| ||| ||||||    
T  49080190 tataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaa 49080242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 12912438 - 12912307
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  12912438 caaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataac 12912339  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    ||||||||||||||| | |||||||||||||||    
T  12912338 acaaaaaactatatt-ccaactactatgtttta 12912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 5369155 - 5369053
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  5369155 ctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaaactatgttacaaa 5369056  T
Q  235 cta 237  Q
    |||    
T  5369055 cta 5369053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 16153568 - 16153358
Alignment:
Q  16 ataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattataat 115  Q
    |||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||                     |||| |||    
T  16153568 ataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaa---------------------atta-aat 16153491  T
Q  116 acaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataa 213  Q
    |||||||||||||||||||||||||||  || ||| || |||| |||| |||||||||||| | |||||| |||||||||||||||||||||||| ||||    
T  16153490 acaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaacttatttcaaagataa 16153392  T
Q  214 cacaaaaaactatattacaaactactatgtttta 247  Q
    ||||||||||||| |||||||||| |||||||||    
T  16153391 cacaaaaaactatgttacaaactattatgtttta 16153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 8959658 - 8959782
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    ||||||| || ||||||||||||||  |||||| || |||| |||| | |||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  8959658 aaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagataaca 8959757  T
Q  216 caaaaaactatattacaaactacta 240  Q
    |||||||||| ||||||||||||||    
T  8959758 caaaaaactaaattacaaactacta 8959782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 1144610 - 1144503
Alignment:
Q  140 tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactact 239  Q
    ||||||||| || |||| |||| |||||||||||||| |||||| | ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||    
T  1144610 tttcattttctctataatcaactaccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactatgttacaaactact 1144511  T
Q  240 atgtttta 247  Q
    ||| ||||    
T  1144510 atggttta 1144503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 236
Target Start/End: Complemental strand, 3463959 - 3463839
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||| ||||||| |||||  |||||||||||||||||||||||| |||||    
T  3463959 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatttcaaagataac 3463860  T
Q  215 acaaaaaactatattacaaact 236  Q
    ||| |||||||| |||||||||    
T  3463859 aca-aaaactatgttacaaact 3463839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 10154152 - 10153985
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattataa 114  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||                     |||| ||    
T  10154152 tataagcaaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctcttccaaagaaaa---------------------atta-aa 10154075  T
Q  115 tacaaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttat 202  Q
    | ||||||||||| ||||||||  |||||||||||| ||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  10154074 tgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaacttat 10153985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 5736372 - 5736252
Alignment:
Q  129 aatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    |||||||||||  ||||||||| ||  ||| |||| || ||||||||||| ||||||  |||||||||||| |||||||||| |||||| ||||||||||    
T  5736372 aatttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatttcaaagataacataaaaaactat 5736273  T
Q  227 attacaaactactatgtttta 247  Q
     ||||||||||||||||||||    
T  5736272 gttacaaactactatgtttta 5736252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 8959577 - 8959650
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  8959577 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaat 8959650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 8506454 - 8506580
Alignment:
Q  117 caaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||  |||||||||| |||||||||      |||||||||||| |||||| |||| ||||||||||||||||||  |||||    
T  8506454 caaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatttcaaggataac 8506547  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    | || ||||||| || |||||||||||||||||    
T  8506548 ataagaaactatgttgcaaactactatgtttta 8506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 42273666 - 42273776
Alignment:
Q  117 caaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac 216  Q
    |||| |||||| ||||| |||||||||||||| || |||||||| | ||||||||||||| |||||| ||||| |||||||||| || |||| | |||||    
T  42273666 caaattgcattcaattttctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacac 42273765  T
Q  217 aaaaaactata 227  Q
    |||||||||||    
T  42273766 aaaaaactata 42273776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 6391806 - 6391879
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  6391806 tataagcaaaaaagactaacttttatcataattaattatgttatttcaaaaaattatcttttccaaagagaaat 6391879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 11262005 - 11261916
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||| ||||    
T  11262005 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattata 11261916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 37522710 - 37522621
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||| ||| | ||||||||||||| |||||| |||||||||||||||| || |||||| ||||||||||||||||    
T  37522710 tctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaactata 37522621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 20644051 - 20644143
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||| ||||    
T  20644051 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattata 20644143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 19413178 - 19413269
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    |||||||| |||||||| ||||||||   ||||||||||||| |||||| |||||| ||||||||||||||||| | |||||||||||||||    
T  19413178 ctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccataaaacttatttcaaagaaaacacaaaaaactat 19413269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 6686424 - 6686514
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttattt-caaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||| |||| | ||||||||||||||||    
T  6686424 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaactata 6686514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 8506381 - 8506447
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  8506381 aaaaaagatcaacttttgtcatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 8506447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 30703640 - 30703750
Alignment:
Q  137 ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaact 236  Q
    |||||||||||| | ||||| ||| ||||||||||| ||  || ||| ||||||||||||| |||||||||| ||||||||||||| ||| ||  |||||    
T  30703640 ctctttcattttctgaataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaattatgttgtaaact 30703739  T
Q  237 actatgtttta 247  Q
    |||||||||||    
T  30703740 actatgtttta 30703750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1144720 - 1144648
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  1144720 tataagcaaaaaagaccaacttttatcatatttaataatgtt-tttcaaaaaattatcttttccaaagaaaaat 1144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 247
Target Start/End: Complemental strand, 29307288 - 29307199
Alignment:
Q  158 caacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    |||| |||||||||||||  |||||| |||||||||||||||||||| ||| || |||||||||||||  |||||||||||||| |||||    
T  29307288 caactaccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaactacgttacaaactactatatttta 29307199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 20039140 - 20039231
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||  |||||||| | ||||| |||||||||||||| |||||||||||||| | ||||||| | ||||||||||| ||||    
T  20039140 tctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataaaacctttttcaaagaaaacacaaaaaattata 20039231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 43590083 - 43589994
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa-ataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| ||| |||||||||||| |||||||| | ||||||||||||||||    
T  43590083 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactt-tttcaaaagaaaacacaaaaaactata 43589994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 18718643 - 18718728
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||||| ||||||| |||||| |||  ||||||||||||||||||  ||||||||| ||||||||||| |||||||||| |||||    
T  18718643 aaccaattaaaattgcttttacatctatctataaaacttatttcaaggataacacaataaactatattataaactactatatttta 18718728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 38280884 - 38280957
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaa 208  Q
    ||||||||||||||||| |||| ||| ||||||||||||||| |||||| | |||||||||||||| |||||||    
T  38280884 ctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctataaaacttttttcaaa 38280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 28907085 - 28907210
Alignment:
Q  117 caaagtgcatttaatttgctctcttt---cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataa 213  Q
    ||||||||||| |||||| |||||||   |||||| || | || |||| |||||| ||||||| |||||| || ||||||||| ||||||||||| ||||    
T  28907085 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa-cttatttcaaagataa 28907183  T
Q  214 cacaaaaaactatattacaaactacta 240  Q
    ||||||||| ||| ||||||| |||||    
T  28907184 cacaaaaaaatatgttacaaattacta 28907210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 28943480 - 28943605
Alignment:
Q  117 caaagtgcatttaatttgctctcttt---cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataa 213  Q
    ||||||||||| |||||| |||||||   |||||| || | || |||| |||||| ||||||| |||||| || ||||||||| ||||||||||| ||||    
T  28943480 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa-cttatttcaaagataa 28943578  T
Q  214 cacaaaaaactatattacaaactacta 240  Q
    ||||||||| ||| ||||||| |||||    
T  28943579 cacaaaaaaatatgttacaaattacta 28943605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 12912511 - 12912445
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||| ||||||| || ||||||||| ||||||||||||||||| |||| |||||||||||    
T  12912511 aaaaaagactagcttttatcatgtttaattatattgtttcaaaaaattatatttttcaaagaaaaat 12912445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 37562883 - 37562793
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttc-aaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||| ||| | | ||||||||||| |||||| |||||||||||||||| || | ||||| ||||||||||||||||    
T  37562883 tctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaactata 37562793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 38130240 - 38130150
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||||||| |||||||| | ||||||||||||  |||||| | |||||||||||||| ||  ||| | ||||||||||||||    
T  38130240 ctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctataaaactttttctaaagaaaacacaaaaaacta 38130150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 29307413 - 29307341
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||||||||||||| ||||||||||||||| ||  |||||||||| |||||||||| |||||    
T  29307413 tataagcaaaaaagactaacttttatcatatttaattatgtttttctaaaaaattat-ttttccaaaggaaaat 29307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 32111039 - 32111124
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaa 220  Q
    ||||||||||| ||||| |||||||| |  |||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||||    
T  32111039 ctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacacaaaa 32111124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 34425378 - 34425459
Alignment:
Q  146 tttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||| |||| ||| | ||||||||||||| |||||| | |||||||||||||| ||||||| | ||||||||||||||||    
T  34425378 tttttccataatcaatagccaatgaaaattgtttttacatattcctataaaacttttttcaaagaaaacacaaaaaactata 34425459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 6391907 - 6391997
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    ||||||||||||| || ||||| || ||||||| ||| ||| |||||| |||| |||| |||||||||||||| || | ||||||||||||    
T  6391907 tctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatttcaaagatgatacaaaaaactat 6391997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 41625634 - 41625541
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatatt 229  Q
    ||||||| |||||||||| ||| ||| | | |||||||||   |||||| ||||||||| |||||||||||||| | ||||||||||||||||||    
T  41625634 ctctcttccattttttca-taatcaatagcgaatgaaaataatttttacatcttcctatgaaacttatttcaaagaaaacacaaaaaactatatt 41625541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 28907005 - 28907066
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||| |||||||||| |||| |||| ||||||||||||||| | |||||||||||||||||    
T  28907005 tataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttt 28907066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 28943400 - 28943461
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||| |||||||||| |||| |||| ||||||||||||||| | |||||||||||||||||    
T  28943400 tataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttt 28943461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 5984216 - 5984140
Alignment:
Q  151 caataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||| |  |||||||||||| |||||| | || |||||||||||||| |||| | ||||||||||||||||    
T  5984216 caataaccaatagtcaatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaaactata 5984140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 104338 - 104263
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    ||||||||||||||||  ||||| || | | ||||||||||| |||||| |||| ||||||||||| |||||||||    
T  104338 ctctctttcatttttttcataactaatagctaatgaaaattgtttttacatctttctataaaacttttttcaaaaa 104263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 8225492 - 8225591
Alignment:
Q  129 aatttgctctctttcattttttcaataaccaacaaccaatgaaa-attggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||  ||  |||||| | |||||||||||||| || |||| | || |||||||||||||    
T  8225492 aattttctctctttcattttttccataaccaatagccaatgaaattttttttttacattttcctataaaactttttccaaagaaaatacaaaaaactata 8225591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 25840901 - 25840992
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    |||||||| |||||||| |||| |||    |||||||||||| |||||| |||||| || ||||||||| |||| | |||||||||||||||    
T  25840901 ctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactat 25840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 43454416 - 43454353
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatatt 229  Q
    ||||||||||| |||||| | ||||||||||||||||  |||| | ||||||||||||||||||    
T  43454416 aatgaaaattgtttttacatattcctataaaacttatgacaaagaaaacacaaaaaactatatt 43454353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 4463397 - 4463479
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacaca 217  Q
    ||||||||||||||||| |||||||| | ||| ||||||||| |||||| |||||| || || |||||| |||| | ||||||    
T  4463397 ctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccatgaagcttattccaaagaaaacaca 4463479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 5659664 - 5659584
Alignment:
Q  118 aaagtgcatttaatttgctctcttt---cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataa 195  Q
    |||||||||| |||||||| |||||   ||||||||| |||| |||| |||||| ||||||| |||||| |||||||||||    
T  5659664 aaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 9957542 - 9957488
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcc 190  Q
    |||||||||||||||||| ||||||| | ||||||||||||| |||||| ||||||    
T  9957542 ctctctttcattttttca-taaccaatagccaatgaaaattgtttttacatcttcc 9957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 25840779 - 25840846
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||| |||||| ||| |||||||||| ||||||||  |||| ||| ||||||| |||||||||||    
T  25840779 aatataagcaaaaatgacaaacttttattctatttaatcttgttttttaaaaaaatcatcttttccaa 25840846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 32432319 - 32432402
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactac-tatgtttta 247  Q
    |||||||||||  |||||| ||||  |||||||||||||||||  |||||| || ||||||| ||| ||||||| |||||||||    
T  32432319 caatgaaaattatttttacatctttatataaaacttatttcaaggataacataagaaactatgttataaactacttatgtttta 32432402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 35275442 - 35275383
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    |||||| || || |||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  35275442 aaaaaataccaaattttatcatatttaattatgttttttcaaaaaatcatctttttcaaa 35275383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 3103535 - 3103489
Alignment:
Q  30 ctaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||||||||| ||||||||||||||  |||||||||||||| ||||    
T  3103535 ctaacttttatcatatttaattatgtcatttcaaaaaattatatttt 3103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 3464040 - 3463974
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatg-ttgtttcaaaaaattatcttttccaa 80  Q
    ||||| |||||||||  ||||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  3464040 tataagcaaaaaagatcaacttttatcatatttaattatgtttttttaaaaaaattattttttccaa 3463974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 12792900 - 12792839
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaa 197  Q
    |||||||||||||| || |||||||| | |||||||||||||  ||||| |||||||||||||    
T  12792900 ctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa 12792839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 39505328 - 39505270
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    ||||||||||||| |||||| |||| | |||||||||||| |||| | |||||||||||    
T  39505328 ccaatgaaaattgtttttacatcttaccataaaacttattccaaagaaaacacaaaaaa 39505270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 13146663 - 13146729
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    |||||||||||||||||| |||||||||  ||||  |||||||| ||||||| |||| |||||||||||    
T  13146663 aatataaacaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaa 13146729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 31690717 - 31690652
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||  |||||| |||| |||||||||| ||| ||| || ||||||||||| ||||    
T  31690717 aaccaatgaaaattatttttacatctttctataaaactcattccaagaagaacacaaaaaattata 31690652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 31690845 - 31690779
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    |||||||||||||||||| |||||||||  ||||  |||||||| ||||||| |||| |||||||||||    
T  31690845 aatataaacaaaaaagaccaacttttatgctatt--attatgttttttcaaacaaatcatcttttccaa 31690779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 24439636 - 24439700
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatat 228  Q
    ||||||| ||||| |||||| |||| | || ||||||||| ||| |||||||||||||| |||||    
T  24439636 ccaatgataattgtttttacatctttccatgaaacttattccaagaataacacaaaaaattatat 24439700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 32017751 - 32017803
Alignment:
Q  146 tttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaac 198  Q
    |||||| |||||||| |  |||||||||||| |||||| ||||||||||||||    
T  32017751 tttttccataaccaatagacaatgaaaattgtttttacatcttcctataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 16688176 - 16688285
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  16688176 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaactatgttacaaacta 16688275  T
Q  238 ctatgtttta 247  Q
    ||||||||||    
T  16688276 ctatgtttta 16688285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 45840209 - 45840078
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  ||||||||| |||| |||| |||||||||||||| |||| | |||||||||||||| |||||||||||||||    
T  45840209 caaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatttcaaaaataac 45840111  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| |||||||||| |||||||||    
T  45840110 acaaaaaactatgttacaaactattatgtttta 45840078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 5950457 - 5950579
Alignment:
Q  118 aaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||||  ||||||    
T  5950457 aaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataaca 5950556  T
Q  216 caaaaaactatattacaaactac 238  Q
    ||| ||||||| || ||||||||    
T  5950557 caagaaactatgttgcaaactac 5950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 37538826 - 37538958
Alignment:
Q  117 caaagtgcatttaatttgctc--tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||  ||||||||||| || ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||  |||||    
T  37538826 caaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatttcaaggataac 37538925  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| || ||||||||||| |||||    
T  37538926 acaagaaactatgttgcaaactactatatttta 37538958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 7397723 - 7397855
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||| |||  |||||| || |||| |||  |||||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  7397723 caaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatttcaaagataac 7397822  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| |||||||||||||| |||||    
T  7397823 acaaaaaactatgttacaaactactatatttta 7397855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 50176564 - 50176671
Alignment:
Q  140 tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactact 239  Q
    ||||||||| || |||| |||| |||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  50176564 tttcattttctctataatcaactaccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactact 50176663  T
Q  240 atgtttta 247  Q
    ||||||||    
T  50176664 atgtttta 50176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 25185448 - 25185315
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||| |||||||  |||||| || |||| |||| |||||||||| ||| ||| || |||||||||||||||||||||||| |||||    
T  25185448 caaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatttcaaagataac 25185349  T
Q  215 acaa-aaaactatattacaaactactatgtttta 247  Q
    |||| |||||||| ||||||||||||||||||||    
T  25185348 acaaaaaaactatgttacaaactactatgtttta 25185315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 30701522 - 30701397
Alignment:
Q  124 catttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||| ||||||||||||||  |||||| || |||| |||| |||||||||||||  ||| || |||||||||||||||||||||||| ||||||||||||    
T  30701522 cattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaa 30701423  T
Q  222 actatattacaaactactatgtttta 247  Q
    | ||| ||||||||||||||||||||    
T  30701422 attatgttacaaactactatgtttta 30701397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 5858515 - 5858391
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| | ||||||||||||| |||||  |||||||||||||||||||||||  |||||    
T  5858515 caaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatttcaaggataac 5858416  T
Q  215 acaaaaaactatattacaaactact 239  Q
    |||| ||||||| || |||||||||    
T  5858415 acaagaaactatgttgcaaactact 5858391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 35366437 - 35366215
Alignment:
Q  5 tgtccaagaatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttc 104  Q
    ||||||| | ||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||                      
T  35366437 tgtccaaaattataagcaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatattttccaaagaaaa------------------ 35366356  T
Q  105 caaattataatacaaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttat 202  Q
       |||| ||| ||||||||||| ||||||||  |||| ||||||  ||||||||||| ||||||| ||||||| |||||| |||| |||||||| ||||    
T  35366355 ---atta-aattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttat 35366260  T
Q  203 ttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||  ||||||||| ||||||| || |||||||||||||||||    
T  35366259 ttcaacgataacacaagaaactatgttgcaaactactatgtttta 35366215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 44510363 - 44510231
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||||  ||||||||| || |||| |||  | |||||||||||| ||||||  |||||||||||| ||||||||||||||||    
T  44510363 caaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatttcaaaaataac 44510264  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| ||| |||||||||| |||||    
T  44510263 acaaaaaactatgttataaactactatatttta 44510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 246
Target Start/End: Original strand, 41063758 - 41063890
Alignment:
Q  117 caaagtgcatttaatttg--ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaa-cttatttcaaaaataa 213  Q
    ||||||||||| ||||||  |||||||| ||||| |||||||| || ||||||||||||||  |||||| |||| |||||||| ||||||| || |||||    
T  41063758 caaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaagcttattttaagaataa 41063857  T
Q  214 cacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||||||||| || ||||||||||||||||    
T  41063858 cacaaaaaactatgttgcaaactactatgtttt 41063890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 2126078 - 2126187
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | |||||||||||||||||| |||| |     
T  2126078 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatattccaaattc 2126177  T
Q  238 ctatgtttta 247  Q
     |||||||||    
T  2126178 ttatgtttta 2126187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 8889794 - 8889717
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactact 239  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  8889794 aaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaataaactatattacaaactact 8889717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 33431574 - 33431687
Alignment:
Q  113 aatacaaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaata 212  Q
    |||||||| | |||||||||| |||||||||||||| || |||||||| | ||||||||||||| |||| | || ||||||||||||| ||| ||||| |    
T  33431574 aatacaaattacatttaattttctctctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaacttttttaaaaaaaa 33431673  T
Q  213 acacaaaaaactat 226  Q
    ||||||||||||||    
T  33431674 acacaaaaaactat 33431687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 15912215 - 15912340
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| |||||| |||||||||||  ||||||||| ||  ||| |||||| |||||||||||| |||||| |||||||||||||||||||||||  ||||     
T  15912215 caaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatttcaaggataa- 15912313  T
Q  215 acaaaaaactatattacaaactactat 241  Q
    |||| ||||||| ||||||||||||||    
T  15912314 acaagaaactatgttacaaactactat 15912340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 43667438 - 43667335
Alignment:
Q  124 catttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    |||| ||||| ||||||||||||||||| ||||||||   ||||||||||||| |||||| |||||||||||||||| ||||||| | |||||||||||     
T  43667438 cattcaattttctctctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaat 43667339  T
Q  224 tata 227  Q
    ||||    
T  43667338 tata 43667335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 32624129 - 32624039
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||||||| ||||||||   ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||    
T  32624129 ctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacta 32624039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 12449091 - 12448999
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| ||||||||   ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  12449091 ctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 12448999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 15959764 - 15959672
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||| ||||    
T  15959764 ctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattata 15959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 39555710 - 39555618
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| |||| ||||||||||| ||||||| | |||||||||| |||||    
T  39555710 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaacctata 39555618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 11241073 - 11241156
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| | |||||||||||||||||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 11241156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 5858588 - 5858522
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5858588 aaaaaagacaaacttttatcatatttaattatgttgtttcaaaaaattatctttttcaaaggaaaat 5858522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 51339115 - 51339049
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  51339115 aaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaat 51339049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 51840713 - 51840647
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  51840713 aaaaaagactaacttttattatatttaattatattttttcaaaaaatcatcttttccaaagagaaat 51840647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 6785493 - 6785585
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa-ataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| ||||| |||||||||| |||||||| | ||||||||||||||||    
T  6785493 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcatataaaactt-tttcaaaagaaaacacaaaaaactata 6785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 37538746 - 37538807
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  37538746 tataaacaaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaattatctttt 37538807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 6786875 - 6786967
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | |||||||||||||  ||||| ||||| |||||||||| || |||| | ||||||||||||||||    
T  6786875 ctctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcatataaaactttttccaaagaaaacacaaaaaactata 6786967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 28120879 - 28120787
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||| ||| | ||||||||||||| |||||| |||||| |||||| | |||| ||||| ||||||||||||||||    
T  28120879 ctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactata 28120787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 28016881 - 28016778
Alignment:
Q  124 catttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    |||| ||||| |||||||| |||||||  |||||||| | ||||||||||||| |||||| |||||||||||||| | ||||||| | ||||| ||||||    
T  28016881 cattcaattttctctcttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctataaaacatttttcaaagaaaacaccaaaaac 28016782  T
Q  224 tata 227  Q
    ||||    
T  28016781 tata 28016778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 33369577 - 33369679
Alignment:
Q  124 catttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    |||| ||||| ||||||||||||||||| |||||||| | ||||||||||||| |||||| || || |||||||||| || |||| | ||||||||||||    
T  33369577 cattcaattttctctctttcattttttccataaccaatagccaatgaaaattgtttttacatc-tcatataaaactttttccaaagaaaacacaaaaaac 33369675  T
Q  224 tata 227  Q
    ||||    
T  33369676 tata 33369679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 45226176 - 45226267
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||| |||||||| |  |||||||||||| |||||| |||||||||||||||| ||||||| | || ||| |||||||||    
T  45226176 tctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaatacataaaactata 45226267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 13352181 - 13352243
Alignment:
Q  185 tcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  13352181 tcttcctataaaacttatttcaaagataacacaaaaaattatgtaacaaactactatgtttta 13352243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 41063685 - 41063751
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||    
T  41063685 aaaaaagaccaacttttatcatttttaattatattgtttcaaaaaattatctttttcaaagaaaaat 41063751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 46543001 - 46543111
Alignment:
Q  117 caaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac 216  Q
    |||| |||||||||||| |||||||||||||| || | |||||| | |||||| |||||| |||| | ||||||||||||  || ||||||| | |||||    
T  46543001 caaattgcatttaattttctctctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctataaattttttttcaaagaaaacac 46543100  T
Q  217 aaaaaactata 227  Q
    |||||||||||    
T  46543101 aaaaaactata 46543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 47014615 - 47014525
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||||||| |||||||| |  |||||||||||| |||||| | |||||||||||||| ||||||  | ||||||||||||||    
T  47014615 ctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctataaaacttttttcaacgaaaacacaaaaaacta 47014525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 7397644 - 7397716
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  7397644 tataagcaaaaaagcctaacttttatcatatttaatta-gttttttcaaaaaattatcttttccaaaggaaaat 7397716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 24190509 - 24190598
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| ||| | |||||||||| || |||| | ||||||||||||||||    
T  24190509 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtataaaactttttccaaagaaaacacaaaaaactata 24190598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 16661532 - 16661657
Alignment:
Q  117 caaagtgcatttaatttgctctcttt---cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataa 213  Q
    ||||||||||| |||||| |||||||   |||||| || | || |||| |||||| ||||||| |||||| || ||||||||| ||||||||||| ||||    
T  16661532 caaagtgcattcaatttgttctcttttttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa-cttatttcaaagataa 16661630  T
Q  214 cacaaaaaactatattacaaactacta 240  Q
    ||||||||| ||| ||||||| |||||    
T  16661631 cacaaaaaaatatgttacaaattacta 16661657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 13351697 - 13351782
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactt 200  Q
    ||||||||||| |||||| ||||  ||||||||| || |||| |||| |||||||||||||| |||||| ||||||||||||||||    
T  13351697 caaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaactt 13351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 32318684 - 32318610
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa 209  Q
    |||||| ||||||| || |||||||| ||||||||||||||| |||||| |||||| ||||||||||||| ||||    
T  32318684 ctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaa 32318610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 3076319 - 3076423
Alignment:
Q  124 catttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||| |||||  ||| |||||||| ||||||||   ||||||||||||  |||||| |||||| |||||||||||| |||| | ||||||||||    
T  3076319 catttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccataaaacttattccaaataaaacacaaaaa 3076418  T
Q  222 actat 226  Q
    |||||    
T  3076419 actat 3076423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 34102195 - 34102123
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||| |||||| ||||||| ||||| |||||    
T  34102195 tataaacaaaaaagacaaacttttatcatatttaattatgttatttc-aaaaatcatctttttcaaaggaaaat 34102123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 40718718 - 40718807
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || ||||| | ||||||||||||| || |||  |||| |||||||||| ||||||| | ||||||||||||||||    
T  40718718 tctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcatataaaacttttttcaaagaaaacacaaaaaactata 40718807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 44148967 - 44148869
Alignment:
Q  126 tttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    |||||||| |||||||  |||||||| ||||||||   ||||||||||||| |||||| |||||| || ||||||||| |||| | ||||||||||||||    
T  44148967 tttaattttctctctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaacta 44148870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 15912152 - 15912208
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  15912152 aacttttatcatatttaattatgttatttcaaaaaatcattttttccaaagaaaaat 15912208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 32983294 - 32983204
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| ||||||||   ||||||||||||| |||||| ||||| |||||||||| || |||| | ||||||||||||||||    
T  32983294 ctctctttcattttttccataaccaatg-ccaatgaaaattgtttttacatcttcttataaaactt-ttccaaagaaaacacaaaaaactata 32983204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 46803760 - 46803684
Alignment:
Q  170 aaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||| |||||| |||| |||| ||||||||| |||  ||||||||||||||||| || ||||||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactactatgtttt 46803684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 2246109 - 2246046
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||  |||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  2246109 ccaatgaaaattctttttacatattcctataaaacttatttcaaagaaaacacaaaaaactata 2246046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 5950382 - 5950449
Alignment:
Q  21 caaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||| || |||||| ||||||||||||  ||| ||||||||||||||||||||||| |||||    
T  5950382 caaaaaagacaaatttttatcatatttaattataatgtctcaaaaaattatcttttccaaaggaaaat 5950449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 50369999 - 50370073
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    |||||||||||||||||| ||||||| | |||||  |||||| |||||| |||||||||||||||| |||||||||    
T  50369999 ctctctttcattttttca-taaccaatagccaatagaaattgtttttacatcttcctataaaacttttttcaaaaa 50370073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 13136683 - 13136617
Alignment:
Q  129 aatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataa 195  Q
    ||||| ||||||||||||||||| |||||||| | |||||| |||||| |||||| |||||||||||    
T  13136683 aattttctctctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctataa 13136617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 35691440 - 35691522
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||||| | ||||| ||||||| |||||| ||| |||||||||||| ||||||| | ||||||||||| ||||    
T  35691440 ttttttccataaccaatagccaataaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaattata 35691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 42965938 - 42965850
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||||| || ||||||| | ||||||||||||| |||||| ||||||||||||| || || |||| | ||||||||||||||    
T  42965938 ctctctttcatttttcca-taaccaatagccaatgaaaattgtttttacatcttcctataaaa-tttttccaaagaaaacacaaaaaacta 42965850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 43359627 - 43359693
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    |||||||||||||||  || |||||| ||||||||||||||||||| ||||| ||||||||| ||||    
T  43359627 tataaacaaaaaagataaatttttatcatatttaattatgttgttttaaaaatttatctttttcaaa 43359693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 16661452 - 16661513
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||| |||||||||| |||| |||| ||||||||||||||| | |||||||||||||||||    
T  16661452 tataagcaaaaaagaccaactgttatcatatttaattatgttttatcaaaaaattatctttt 16661513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6787114 - 6787050
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaact 199  Q
    ||||||||||||||||| |||||||| | ||||| ||||||  |||||| |||||||||||||||    
T  6787114 ctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctataaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13351617 - 13351669
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaa 67  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  13351617 tataagcaaaaaagaccaacttttattatatttaattatgttttttaaaaaaa 13351669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 39932696 - 39932604
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| ||||| || || ||||| | ||||| ||||||| |||||  ||||| |||||||||||||  ||||| ||||||||||||||||    
T  39932696 ctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttataaaacttattaaaaaaaaaacacaaaaaactata 39932604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 47600162 - 47600098
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactt 200  Q
    |||||||||||||||  |||| ||| | ||||||||||||| |||||| ||||||||||||||||    
T  47600162 tctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 47600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 52841565 - 52841457
Alignment:
Q  139 ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactac 238  Q
    ||||||||||  | ||||| || ||||||||||||||| ||| || |||| |||| |||||||||| ||  |||| |||| |||||||| |||||||||     
T  52841565 ctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattttaaggataagacaagaaactatactacaaactat 52841466  T
Q  239 tatgtttta 247  Q
    | |||||||    
T  52841465 tgtgtttta 52841457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 52841653 - 52841609
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  52841653 aacttttattatatttaattatgttatttcaaaaatttatctttt 52841609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 16854177 - 16854252
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    |||||||||||||| || |||||||| | ||||| ||||||| ||||||  ||||| ||||||||| |||||||||    
T  16854177 ctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaaacttttttcaaaaa 16854252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 43765332 - 43765431
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac-aaaaaactatattacaaa 234  Q
    |||||| |||||| |  ||||| || |||||||||||| || |||||| |||||||||||||||||||  ||| | ||||| ||||||||||| ||||||    
T  43765332 tctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctataaaacttattctaaagaaaacacaaaaaaactatactacaaa 43765431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 46818597 - 46818534
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||| |||||  |||||||||||||||| ||||||| | || |||||||||||||    
T  46818597 ccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaatacaaaaaactata 46818534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 51339021 - 51338938
Alignment:
Q  136 tctctttcattttt-tcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaa 218  Q
    ||||||||| |||| || ||||| || ||||||||||||||| |||||| |||| |||| |||||||||||||| | |||||||    
T  51339021 tctctttcaattttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaa 51338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 25185497 - 25185455
Alignment:
Q  46 ttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  25185497 ttaaatatgttttttcaaaaaattatcttttccaaagaaaaat 25185455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 37735520 - 37735415
Alignment:
Q  124 catttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||| ||||| ||||||||  |||||| || |||| ||| | ||||| ||||||| ||||||||||||| || ||||||||| |||| | || |||||||    
T  37735520 cattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttattccaaagaaaatacaaaaa 37735421  T
Q  222 actata 227  Q
    ||||||    
T  37735420 actata 37735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 1820452 - 1820564
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaa-aaaactatattacaa 233  Q
    ||||||||||||||||  |||||||| | | |||||| |||  |||||| |||||||||||||||| || |||||| | ||||| ||||||||||| |||    
T  1820452 ctctctttcatttttttcataaccaaaagctaatgaatattt-ttttacatcttcctataaaactttttccaaaaaaagcacaataaaactatattccaa 1820550  T
Q  234 actactatgtttta 247  Q
    | |  |||||||||    
T  1820551 attcttatgtttta 1820564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 30221771 - 30221856
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatatt 229  Q
    ||||| || |||||||| | ||||| |||| || |||||| |||||| ||||||||||||| ||| | ||||||||||| ||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatatt 30221856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 34102097 - 34102048
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttact 184  Q
    |||||||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  34102097 ctctctttcactttctcaataaccaataaccaatgaaaattgtttttact 34102048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 35884271 - 35884336
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||  |||||| |||| | |||||| |||||||||||| ||||||||||| ||||    
T  35884271 aaccaatgaaaattatttttacatctttccataaaatttatttcaaaaagaacacaaaaaattata 35884336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 46804755 - 46804690
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    |||||||| ||||||||||| ||||| ||||||||| || || |||||||||||  ||||||||||    
T  46804755 tataaacagaaaagactaacgtttatcatatttaataatattttttcaaaaaatcttcttttccaa 46804690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 3861815 - 3861707
Alignment:
Q  139 ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactac 238  Q
    ||||||||||||  |||| ||| | ||||||||||||| |||||| |||| | ||||||||||||  ||| | |||| |||||| |||| | |||| ||     
T  3861815 ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttattctaaagaaaacataaaaaattatacttcaaattat 3861716  T
Q  239 tatgtttta 247  Q
    |||||||||    
T  3861715 tatgtttta 3861707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 10558880 - 10558796
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaa 219  Q
    ||||||| |||||| || |||| ||| | ||||||||||||| |||||| |||||| |||||| ||||| |||| | ||||||||    
T  10558880 ctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 51840619 - 51840507
Alignment:
Q  136 tctctttcattttt-tcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    ||||||||| |||| || ||||| || ||||||||||||||| |||||  |||| |||| ||||||||| |||| ||||||||| ||   ||| ||||||    
T  51840619 tctctttcaattttctctataactaataaccaatgaaaattgattttatatctttctatgaaacttattccaaagataacacaagaagtcatactacaaa 51840520  T
Q  235 ctactatgtttta 247  Q
    |||| || |||||    
T  51840519 ctacaatatttta 51840507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 13291835 - 13291930
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactact 239  Q
    ||||| |||||||| || ||| |||| |||||| | || | |||| |||| ||||||||| |||  ||||||||| |||| |||||||||||||||    
T  13291835 attttctcaataactaataacaaatgcaaattgttcttgcatctttctatgaaacttattccaaggataacacaagaaacaatattacaaactact 13291930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 24728751 - 24728664
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    |||||||| |||||||| |||| |||   ||||||||||||| |||||| |||||| || |||||||||  ||| | |||||||||||    
T  24728751 ctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattcgaaagaaaacacaaaaaa 24728664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 37192948 - 37192909
Alignment:
Q  43 tatttaattatgttgtttcaaaaaattatcttttccaaag 82  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  37192948 tatttaattatgttgtttataaaaattatcttttccaaag 37192909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 52984999 - 52985062
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||| |||||| ||||||  | ||||||||| |||| | ||||||||||||||||    
T  52984999 ccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactata 52985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 13050294 - 13050360
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| || ||||||||| |||||||||||| || |||||||||| ||| ||||| |||| |||||    
T  13050294 aaaaaaaaccaacttttatcatatttaattatattttttcaaaaaactatattttcgaaaggaaaat 13050360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 39151375 - 39151317
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatct 73  Q
    |||||||||||||||| ||| ||||| |||| ||||||| |||||| | ||||||||||    
T  39151375 tataaacaaaaaagaccaacctttatcatatctaattatattgttttataaaattatct 39151317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 50176447 - 50176501
Alignment:
Q  14 atataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaat 68  Q
    |||||| |||||| || |||||||||| || |||||||||||||| |||||||||    
T  50176447 atataagcaaaaaggattaacttttatcatgtttaattatgttgtatcaaaaaat 50176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 39151303 - 39151243
Alignment:
Q  118 aaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattg 176  Q
    |||||||||| |||||||| |  |||||||||| |||||||| || |||||||||||||||    
T  39151303 aaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattg 39151243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 39151242 - 39151194
Alignment:
Q  191 tataaaacttatttcaaaaataacacaaaaaactatattacaaactact 239  Q
    |||||||||||||||||  ||||||||| ||||||| || |||||||||    
T  39151242 tataaaacttatttcaaggataacacaagaaactatgttgcaaactact 39151194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 40219989 - 40220054
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||| ||||||||||||| ||||||  ||||  |||||||| ||||||| || ||||||||||||    
T  40219989 aatataagcaaaaaagactaatttttatgctatt--attatgttttttcaaacaaatatcttttccaa 40220054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 41362452 - 41362320
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||||||||||||| ||||  |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  41362452 caaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataac 41362353  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| ||||||||||||||||||||    
T  41362352 acaaaaaactatgttacaaactactatgtttta 41362320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 8745607 - 8745730
Alignment:
Q  126 tttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    ||||||||||||||  ||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||    
T  8745607 tttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaagaataacacaagaaac 8745706  T
Q  224 tatattacaaactactatgtttta 247  Q
    ||| || |||||||||||||||||    
T  8745707 tatgttgcaaactactatgtttta 8745730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 4039025 - 4038895
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||| ||||||||||||||  |||||| || |||| |||| || ||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  4039025 aaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatttcaaaaataaca 4038926  T
Q  216 caaaaaactatattacaaactactatgtttta 247  Q
    || |||||||| ||||||||||||||||||||    
T  4038925 ca-aaaactatgttacaaactactatgtttta 4038895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 17336757 - 17336889
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||||  ||||||||  || |||| |||| |||||||||||||| |||||| ||||||||||||| |||||||||| || ||    
T  17336757 caaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatttcaaagatgac 17336856  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| |||||||||||||| |||||    
T  17336857 acaaaaaactatgttacaaactactatatttta 17336889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 17713238 - 17713370
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||| |||||||| |  |||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||||||||  |||||    
T  17713238 caaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatttcaaggataac 17713337  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| || |||| ||||||||||||    
T  17713338 acaagaaactatgttgcaaaatactatgtttta 17713370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 38072174 - 38072310
Alignment:
Q  113 aatacaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    ||||||||||||||| |||||||||| |||  |||||| || |||| |||| |||||||||||||| |||||| | ||  ||||||||||| |||||| |    
T  38072174 aatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattcaaaga 38072273  T
Q  211 taacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||||| ||||||||||||||||||||    
T  38072274 taacacaaaaaactatgttacaaactactatgtttta 38072310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 8673396 - 8673518
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||||| |||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| ||||| |||||||||||||||||| |||||    
T  8673396 caaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatttcaaatataac 8673495  T
Q  215 acaaaaaactatattacaaacta 237  Q
    |||||||||||| ||||||||||    
T  8673496 acaaaaaactatgttacaaacta 8673518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 2628314 - 2628178
Alignment:
Q  112 taatacaaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa 209  Q
    |||| ||||||| ||| ||||||||||||  |||||||| ||||||| ||| ||||||||||||||  |||||| |||||||||||||||||||| ||      
T  2628314 taatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttattttaagg 2628215  T
Q  210 ataacacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||||| ||||||| || ||||||||||||||||    
T  2628214 ataacacaagaaactatgttgcaaactactatgtttt 2628178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 26954537 - 26954444
Alignment:
Q  117 caaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaa 208  Q
    ||||||||||| | ||||||  |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  26954537 caaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatttcaaa 26954444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 17314845 - 17314977
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||||  ||||||||| || |||| |||| |||||||||||||| |||||| | ||| ||| ||| |||||||||| || ||    
T  17314845 caaagtgcattcaatttgctctccttttcattttctctataatcaactaccaatgaaaattgcttttacattttcgtatgaaatttatttcaaagatgac 17314944  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    ||||||| |||| ||||||||||||||||||||    
T  17314945 acaaaaagctatgttacaaactactatgtttta 17314977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 25195191 - 25195085
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  25195191 caaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa-ttatttcaaagataac 25195093  T
Q  215 acaaaaaa 222  Q
    ||||||||    
T  25195092 acaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 36190807 - 36190899
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  36190807 ctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 36190899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 28497253 - 28497152
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtt 244  Q
    |||||||||||||||| ||  ||||||||||| |||||| |||||| ||||||||||||||||  ||||||||| ||||||| || ||||||||||| ||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactatgttgcaaactactatatt 28497154  T
Q  245 tt 246  Q
    ||    
T  28497153 tt 28497152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 15958036 - 15957944
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | | ||||||||||| |||||||| |||||||||||||| ||||||| | ||||||| ||||||||    
T  15958036 ctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcctataaaacttttttcaaagaaaacacaataaactata 15957944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 31734150 - 31734242
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| ||| |||| | ||||||||||||| |||||  |||||||||||||||| ||||||| | ||||||||||||||||    
T  31734150 ctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactata 31734242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 34890299 - 34890207
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||| ||||    
T  34890299 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattata 34890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 7022525 - 7022436
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||  |||||  |||||||||||||||| ||||||| | ||||||||||||||||    
T  7022525 tctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaactata 7022436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 26483570 - 26483659
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||| ||| | ||||||||||||| |||||| ||| |||||||||||| ||||||| | ||||||||||||||||    
T  26483570 tctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaactata 26483659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 7858563 - 7858655
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||| |||    |||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  7858563 ctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaactata 7858655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 8711912 - 8712003
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| |||||||| | ||||||||||||  |||||| |||||||||||||||| |||| |||| ||||||||||||||||    
T  8711912 ctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactt-tttccaaaaaaacacaaaaaactata 8712003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 43216472 - 43216380
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || |||||||| |   ||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  43216472 ctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 43216380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 17713165 - 17713231
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||    
T  17713165 aaaaaagaccaacttttatcatatttaattatattgtttcaacaaattatcttttccaaaggaaaat 17713231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 13144070 - 13143978
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaac-ttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| || ||||||| ||| ||||||||||| |||||| |||||||||||||| || ||||||| | ||||||||||||||||    
T  13144070 ctctctttcatttttcca-taaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactata 13143978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 28497738 - 28497665
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||||| | || ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28497738 tataagcaaaatataccaacttttatcatatttaattatgttatttcaaaaaattatcttttccaaaggaaaat 28497665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 29147382 - 29147250
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| ||||||||||||| ||||  ||||||||| || |||| ||||||| ||||||||||| |||| | ||||| ||| |||||||||| |   |||||    
T  29147382 caaactgcatttaatttgatctccatttcattttctctataatcaacaactaatgaaaattgtttttccatcttcttattaaacttattttatggataac 29147283  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||| ||| |||||||||||||| |||||    
T  29147282 acaagaaattatgttacaaactactatatttta 29147250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 13143799 - 13143891
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| | | |||||||| ||||||||||||| |||||| ||||||||| |||||| ||||||  | ||||||||||| ||||    
T  13143799 ctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctatgaaacttttttcaacgaaaacacaaaaaattata 13143891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 41362515 - 41362459
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41362515 aacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 41362459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 2628382 - 2628316
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| || ||||||||| |||||||||||| |||||||||||||||||||||| ||||| |||||    
T  2628382 aaaaaacaccaacttttatcatatttaattatattgtttcaaaaaattatctttttcaaaggaaaat 2628316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 25195264 - 25195198
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||| | ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  25195264 aaaaaaggccaacttctatcatatttaattatgttttttcaaaaacttatcttttccaaagaaaaat 25195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 5217428 - 5217517
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||| || ||||| || ||||||| ||||||| |||||| |||| |||| |||||||||||||  ||||||||| ||||||    
T  5217428 tctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaacta 5217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 6401682 - 6401767
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||| |||||| |||||| ||||  ||  ||||||||||||| ||||||||||||||||||| |||||| |||||| |||||    
T  6401682 aaccaatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaattactatatttta 6401767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 35456149 - 35456037
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||| |||||||| ||||  || | ||||||||||||| |||||| |||| ||||||||||| ||||||||| |||| ||||||||||| | ||||    
T  35456149 ctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctataaaactt-tttcaaaaaaaacataaaaaactatacttcaaa 35456051  T
Q  235 ctactatgttttac 248  Q
     |  ||||||||||    
T  35456050 ttcttatgttttac 35456037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 35525622 - 35525707
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaa 220  Q
    |||||||| |||||||| |||||||| |  |||||||||||| |||||| ||||||| |||||||| ||||||| | |||||||||    
T  35525622 ctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaacacaaaa 35525707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 41086511 - 41086419
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||| ||| |||||||| || ||||| | ||||||||||||| |||||| ||||  |||||||||| ||||||| | ||||||||||||||||    
T  41086511 ctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaactata 41086419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 26954610 - 26954551
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||||||| || |||||| |||||| | |||||||||||||||||||||||||||||||    
T  26954610 aaaaaagaccaaattttatcatattttactatgttgtttcaaaaaattatcttttccaaa 26954551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 8712577 - 8712671
Alignment:
Q  153 ataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||| || ||||||| ||||||| |||||| |||| |||||||||||||| ||| |||||||||| |||||| | | |||  ||||||||||||    
T  8712577 ataactaataaccaataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgtttta 8712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 17314765 - 17314827
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    ||||| |||||||||  ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17314765 tataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaacttatcttttc 17314827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 27819681 - 27819806
Alignment:
Q  124 catttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    ||||||||||||||||  ||| ||||| || |||||||| || |||| |||| || |||||| ||||  ||||||||||||||  |  |||| |||| ||    
T  27819681 catttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaacttatttgtaggataatacaagaa 27819780  T
Q  222 actatattacaaactactatgtttta 247  Q
    ||||| |||||||||| |||||||||    
T  27819781 actatgttacaaactattatgtttta 27819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 30575960 - 30575870
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctat-aaaacttatttcaaaaataacacaaaaaact 224  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| | ||||| | ||||||| ||| ||| | |||||||||||||    
T  30575960 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaactttttttaaagaaaacacaaaaaact 30575870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 5217327 - 5217392
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| |||||||| || |||||| ||||    
T  5217327 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaacatcatctttcccaa 5217392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 27819594 - 27819667
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||  ||||||||| |||||||||| |||| ||||||||||| ||||||| ||||| |||||    
T  27819594 tataagcaaaaaagataaacttttatcatatttaattttgttatttcaaaaaatcatctttttcaaaggaaaat 27819667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 16358236 - 16358145
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||  |||| ||| |  |||||||||||| |||||| ||||||||| |||||| ||||||| | |||| |||||||||||    
T  16358236 ctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaactt-tttcaaagaaaacaaaaaaaactata 16358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 24892874 - 24892968
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttact---tcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||| |   || ||||||||||| | || |||| | ||||||||||||||||    
T  24892874 tctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcctcctataaaacgttttccaaagaaaacacaaaaaactata 24892968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 29920393 - 29920306
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    |||||||  ||||| || |||| ||| | ||||||||||||| |||||| |||||| || ||||||||| |||| |||||||||||||    
T  29920393 ctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaagataacacaaaaaa 29920306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 4047140 - 4047075
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttcca 79  Q
    ||||||| |||||||||| |||||||||| ||||||||  |||| ||| ||||||||||||||||||    
T  4047140 aatataagcaaaaaagacaaacttttattctatttaatcttgtt-tttaaaaaaattatcttttcca 4047075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 8709881 - 8709819
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| || ||||||||||||| || | |||||||||||| | ||||||||||||||||    
T  8709881 caatgaaaaatgtttttacttcttcccatgagacttatttcaaagaaaacacaaaaaactata 8709819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 27740549 - 27740607
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaa 80  Q
    ||||||||  ||||||||| ||||||||||||||||||| |||| || |||||||||||    
T  27740549 aaaaaagataaacttttatcatatttaattatgttgttttaaaatatcatcttttccaa 27740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 4480841 - 4480902
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||  |||||| |||||| ||||||||||||| ||| |||||||||||| |||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctata 4480902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 8712463 - 8712528
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| |||||||||| |||||||||||||| ||| ||||| |||| |||| |||| ||||||    
T  8712463 aaaaagaccaacttttattttatttaattatgttattttaaaaatttattttttacaaaaaaaaat 8712528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 12893990 - 12893926
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||||| ||||||||||||||| ||| |||||| |||||||| |||||| ||||    
T  12893990 aaaaaaactaacttttatcatatttaattatgttattttaaaaaa-tatcttttacaaagagaaat 12893926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 14576360 - 14576315
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaa 67  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||    
T  14576360 aaaaaagatcaacttttatcatatttaattatgttgtttcaaaaaa 14576315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41791668 - 41791619
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||||||| |||||||||||| || ||||||||||| ||||||||||||    
T  41791668 aacttttatcatatttaattatcttttttcaaaaaatcatcttttccaaa 41791619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 28348646 - 28348737
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| || ||||||| | |||||| |||||| |||||| | |||||||||||||| || |||| | || |||||| ||||||    
T  28348646 ctctctttcatttttcca-taaccaatagccaatggaaattgtttttacatattcctataaaactttttccaaagaaaatacaaaatactata 28348737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 14693434 - 14693484
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||||| |||||| ||||| ||||||| |||||||||| ||||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 34899887 - 34899933
Alignment:
Q  42 atatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||| ||||||||||| |||||||| |||| |||||    
T  34899887 atatttaattatgttatttcaaaaaatcatcttttctaaagtaaaat 34899933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 4039107 - 4039066
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgtt 56  Q
    |||||| |||||| |||||||||||| |||||||||||||||    
T  4039107 tataaaaaaaaaaaactaacttttatcatatttaattatgtt 4039066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 8673317 - 8673389
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||  |  |||| ||| ||||||||||||||||||||| |||||    
T  8673317 tataagcaaaaaagaccaacttttatcatattttttagtgtt-tttaaaaaaattatcttttccaaaggaaaat 8673389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 8745535 - 8745584
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||| ||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  8745535 aacttctatcatatttaattatgttatttcaaaaaatcatctttttcaaa 8745584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 27752521 - 27752587
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    |||||||||||||||||| |||||||||  |||||  ||||||| ||||||| |||| |||||||||||    
T  27752521 aatataaacaaaaaagaccaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaa 27752587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 33563606 - 33563561
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    |||||||||||| |||||| |||||| ||||||||||||| |||||    
T  33563606 caatgaaaattgtttttacatcttcccataaaacttatttaaaaaa 33563561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 34158416 - 34158351
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactt 200  Q
    ||||||||  ||||||  |||||||| |  |||||||||||| |||||| ||||||||||||||||    
T  34158416 ctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctataaaactt 34158351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 34713591 - 34713656
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| ||||  |||||| |||| ||| |||||||||||||| || ||||||||||| ||||    
T  34713591 aaccaatgagaattatttttacatctttctagaaaacttatttcaagaaaaacacaaaaaattata 34713656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 3642094 - 3642039
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcct 191  Q
    ||||||||||||||||| |||||||| | ||||| ||||||| |||||| |||||||    
T  3642094 ctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 32010119 - 32010247
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||||||||||||||||||  |||||| || |||| |||| |||||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  32010119 caaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataac 32010218  T
Q  215 acaaaaaactatattacaaactactatgt 243  Q
    |||||||||||||||||||||||||||||    
T  32010219 acaaaaaactatattacaaactactatgt 32010247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 26998334 - 26998466
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||    
T  26998334 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttattttaaagataac 26998433  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| ||||||||||| ||||||||    
T  26998434 acaaaaaactatcttacaaactaccatgtttta 26998466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 38071014 - 38071144
Alignment:
Q  118 aaagtgcatttaatttgctctcttt-cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacac 216  Q
    |||||||||| |||||||||| ||| |||||| || |||| |||| |||||||||||||| |||||| ||||||| |||||||||||||||| |||||||    
T  38071014 aaagtgcattcaatttgctctattttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatttcaaagataacac 38071113  T
Q  217 aaaaaactatattacaaactactatgtttta 247  Q
    |||||||||| ||||||||||| ||||||||    
T  38071114 aaaaaactatgttacaaactaccatgtttta 38071144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 32273689 - 32273807
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||  |||||||||||||||||||||||| ||||||    
T  32273689 aaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatttcaaagataaca 32273788  T
Q  216 caaaaaactatattacaaa 234  Q
    ||||||||||| |||||||    
T  32273789 caaaaaactatgttacaaa 32273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 4891781 - 4891649
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||| ||| ||||||||||  |||||| |  |||| |||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||||||    
T  4891781 aaagtgcattcaatctgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatttcaaagataaca 4891682  T
Q  216 caa-aaaactatattacaaactactatgtttta 247  Q
    ||| |||||||| |||||||||||||| |||||    
T  4891681 caaaaaaactatgttacaaactactatatttta 4891649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 247
Target Start/End: Original strand, 8701517 - 8701751
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctc--tctcttccaaatt 110  Q
    |||||||||||||||||| |||||||||||||||||||  |||| ||| ||||||| |||||||||||  |||| |  ||||||   |||| |  |||||    
T  8701517 aatataaacaaaaaagacaaacttttattatatttaatcttgttttttaaaaaaatcatcttttccaataaaaact--tttgcttgttctcatg-aaatt 8701613  T
Q  111 ataatacaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaa 208  Q
    | |||||||| | |||||||||| |||||| |  ||||||||| |||||||| | ||||||||||||| |||||| |||||| || ||||||||| ||||    
T  8701614 a-aatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaa 8701712  T
Q  209 aataacacaaaaaactatattacaaactactatgtttta 247  Q
     | |||| ||||||||||  |||||| |  |||||||||    
T  8701713 gaaaacataaaaaactatgctacaaatttttatgtttta 8701751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 9709458 - 9709524
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  9709458 aaaaaagactaacttttatcatatttaattatgttgtttcaaaaaattatctttaccaaagaaaaat 9709524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 44442148 - 44442281
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||| |||||  |||||| || |||| |||| | |||||||||||| |||||| ||||| ||||||| |||||| |||||||||    
T  44442148 caaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaatttattttaaaaataac 44442247  T
Q  215 acaaa-aaactatattacaaactactatgtttta 247  Q
    ||||| ||||||| |||||||||| |||||||||    
T  44442248 acaaataaactatgttacaaactattatgtttta 44442281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 45660402 - 45660494
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  45660402 ctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 45660494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 14874000 - 14874101
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||||||||| || |||||||| | ||||||||||||  |||||| |||||||||||||||| ||||||| | |||||||||||||||| | ||||    
T  14874000 ctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaa 14874099  T
Q  235 ct 236  Q
    ||    
T  14874100 ct 14874101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 20380140 - 20380256
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||||  ||||||||| || |||| |||| |||||||||  ||  |||||| | |||||||||||||||||||||| |||||    
T  20380140 caaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatttcaaagataac 20380239  T
Q  215 acaaaaaactatattac 231  Q
    |||||||||||| ||||    
T  20380240 acaaaaaactatgttac 20380256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 38070933 - 38071006
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  38070933 tataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 38071006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 8032812 - 8032702
Alignment:
Q  117 caaagtgcatttaatttgctctct---ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataa 213  Q
    |||| |||||| ||||||||||||   |||||||| |||||||| | |||||||| ||||||| |||||| |||||||||||||||||   |||||||||    
T  8032812 caaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaacttaacacaaaaataa 8032713  T
Q  214 cacaaaaaact 224  Q
    |||||||||||    
T  8032712 cacaaaaaact 8032702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 9709525 - 9709652
Alignment:
Q  112 taatacaaagtgcatttaatttg--ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa 209  Q
    |||| |||| |||||| ||||||  |||||||||||||| ||||||| ||| ||| ||||||||||| ||| || |||||||||||||||| ||||||      
T  9709525 taatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaagg 9709624  T
Q  210 ataacacaaaaaactatattacaaacta 237  Q
    ||||||||| ||||||| || |||||||    
T  9709625 ataacacaagaaactatgttgcaaacta 9709652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 28858346 - 28858436
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    ||||||||||||||| |||||||||| | ||||||||||||  |||||| |||| ||||||||||| ||||||| | ||||||||||||||    
T  28858346 ctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaacta 28858436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 33198754 - 33198664
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaacta 225  Q
    |||||||||||||| || |||||||| ||||||| ||||||| |||||| |||||||||||||||| ||| ||| | ||||||||||||||    
T  33198754 ctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaacttcttttaaagaaaacacaaaaaacta 33198664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 3201366 - 3201455
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||| ||||||||||| || |||| | ||||||||||||||||    
T  3201366 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaaactata 3201455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 26998254 - 26998327
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||| |||||    
T  26998254 tataagcaaaaaagaccaacttttatcatatttaattatattttttcaaaaaattatcttttccaaaggaaaat 26998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 32273608 - 32273681
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||||| |||||    
T  32273608 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatattttccaaaggaaaat 32273681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 40584521 - 40584436
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaa 220  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||| |||||| ||||||||||||  ||| | |||||||||    
T  40584521 ctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccataaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 41528296 - 41528385
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||   |||||||| | ||||||||||||||||    
T  41528296 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaactata 41528385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 6110322 - 6110230
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || | || | |||||||||| |||||    
T  6110322 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagctata 6110230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 19264137 - 19264229
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||| ||||    
T  19264137 ctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaattata 19264229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 45085294 - 45085386
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| ||||||||   | ||||||||||| |||||| |||||||||||||||| ||||||| | || |||||||||||||    
T  45085294 ctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactata 45085386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 20380060 - 20380133
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| |||||||||  |||||||||||||| |||||||| |||||||||||||||| |||||    
T  20380060 tataagcaaaaaagaccaacttttatcttatttaattatgttttttcaaaatattatcttttccaaaggaaaat 20380133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 28599268 - 28599179
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||  |||||| |||||||||||| ||| || |||| | ||||||||||||||||    
T  28599268 tctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaactata 28599179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 11617061 - 11617153
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||| | |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | || || ||||||||||    
T  11617061 ctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaataccaaaaactata 11617153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 8032874 - 8032819
Alignment:
Q  33 acttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8032874 acttttatcatatttaattatgttgttttaaaaaattatctttttcaaagaaaaat 8032819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 25572070 - 25572173
Alignment:
Q  124 catttaatttgctctct-ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    |||||||||| |||||| |||  |||||| |||||||| | ||||||||||||| |||||| |||||| || ||||||||| |||| | |||||||||||    
T  25572070 catttaattttctctctcttccatttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaa 25572169  T
Q  223 ctat 226  Q
    ||||    
T  25572170 ctat 25572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 35115927 - 35115834
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatt-tcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||| || |||||||| ||| ||||||||||| |||||| |||| ||||||||||||||   ||||| ||||||||||||||||    
T  35115927 ctctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacacaaaaaactata 35115834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 35517163 - 35517252
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||  |||||| |||  ||||||||||| || |||| | ||||||||||||||||    
T  35517163 tctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactttttccaaagaaaacacaaaaaactata 35517252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 12938279 - 12938371
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| ||||| || |||| ||| | ||||||||||||| ||||||   |||||||||||||||||||||| | | ||||||||||||||    
T  12938279 ctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctataaaacttatttcaaagaaagcacaaaaaactata 12938371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 40808855 - 40808752
Alignment:
Q  122 tgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||||| |||||||| ||||||||  |||||||   | ||||||||||| |||||| |||||| || ||||||||| |||| | ||||||||||    
T  40808855 tgcatttaattttctctcttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T
Q  222 actat 226  Q
    |||||    
T  40808756 actat 40808752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 29524164 - 29524077
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    |||||||| |||||||| ||||||||   ||||||||||||| |||||| |||||| || ||||||||| |||| | |||||||||||    
T  29524164 ctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaa 29524077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 33933136 - 33933069
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttc-aaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| ||| |||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  33933136 aaaaaagattaatttttattatatttaattacgttatttcaaaaaaatcatcttttccaaagaaaaat 33933069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 16179916 - 16179850
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| || |||||| ||||||||| || ||||||||||||||||| |||||||||| |||||    
T  16179916 aaaaaagaccaatttttatcatatttaatgatattgtttcaaaaaattattttttccaaaggaaaat 16179850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 32010046 - 32010112
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||  ||||||||| |||||||||||| || ||||||||||||||||||| ||||| |||||    
T  32010046 aaaaaagatcaacttttatcatatttaattatattttttcaaaaaattatctttttcaaaggaaaat 32010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 4891862 - 4891789
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||||||| |  ||||||||| ||||||||||||||| |||||||||||||| |||| ||||| |||||    
T  4891862 tataagcaaaaaatatcaacttttatcatatttaattatgttttttcaaaaaattatatttttcaaaggaaaat 4891789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 11031066 - 11030951
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| ||       |||||| |||||  |||| ||||||||||||||| ||| ||||     
T  11031066 caaagtgcattcaatttgctctctctttcattttctcaataaccaataa-------aaattgtttttatatctttctataaaacttattttaaagataag 11030974  T
Q  215 acaaaaaactatattacaaacta 237  Q
    |||| ||||||| ||||||||||    
T  11030973 acaagaaactatgttacaaacta 11030951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 24204652 - 24204560
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||| |  |||||||| | ||||||||||||| |||||| | ||||||||||||||||| |||| | ||||||| ||| ||||    
T  24204652 ctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctataaaacttattccaaagaaaacacaataaattata 24204560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 11031139 - 11031080
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||||||  ||||||||| ||||||||||||||||||| |||||||| || ||||||||    
T  11031139 aaaaaagatcaacttttatcatatttaattatgttgttttaaaaaattgtcatttccaaa 11031080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 16495019 - 16494976
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaa 208  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaacttatttcaaa 16494976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 30830719 - 30830633
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||| ||||||||| ||||||| ||| ||||||||||| ||  |||||  |||||  || |||||||||||||||| ||||||||||    
T  30830719 ctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttatttcaaaaaaaacacaaaaa 30830633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 33677529 - 33677611
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    ||||| || |||||||| |  |||||||||||| |||||| ||||||||||||||||| |  ||||| |||| ||||||||||    
T  33677529 attttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaacttagtaaaaaaaaaacataaaaaactat 33677611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 43415468 - 43415530
Alignment:
Q  165 caatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||| |||||| |||||||||||||||| ||| ||| | ||||||||||| ||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattata 43415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 33933002 - 33932934
Alignment:
Q  179 tttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||| |||| |||||||||||| | ||| ||||| |||||||| |||| |||||| ||||||||||||    
T  33933002 tttacatctttctataaaacttaatccaagaataatacaaaaaattatactacaaaatactatgtttta 33932934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 921762 - 921707
Alignment:
Q  23 aaaaagactaactttt-attatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||| || |||||    
T  921762 aaaaagactaactttttatcatatttaattatgttttttcaaaaaataatattttc 921707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 6766046 - 6765964
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||||| |  |||| ||||||| |||||| ||||||||||||| ||||| |||  | |||| |||||||||||    
T  6766046 ttttttccataaccaatagtcaataaaaattgtttttacatcttcctataaaatttattccaatgaaaacataaaaaactata 6765964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 9864813 - 9864755
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    ||||||||||||| |||||| |||||| || ||||||||| |||| | |||||||||||    
T  9864813 ccaatgaaaattgtttttacctcttcccatgaaacttattccaaagaaaacacaaaaaa 9864755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 18834006 - 18833941
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| ||||| |||||| |||| | || ||||||||| ||| |||||||||||||| ||||    
T  18834006 aaccaatgataattgtttttacatctttccatgaaacttattccaagaataacacaaaaaattata 18833941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 35022967 - 35023027
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||| |||||| ||||||||| ||||||| | |||||| ||||||||||| ||||    
T  35022967 aatgaaaattgtttttacatcttcctatgaaacttactccaaaaa-aacacaaaaaattata 35023027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 22479237 - 22479025
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattataa 114  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||                     |||| ||    
T  22479237 tataagcaaaaaagacaaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaa---------------------atta-aa 22479160  T
Q  115 tacaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaata 212  Q
    | ||||||||||| ||||||||||||||  |||||| || |||| |||| ||||||||||| || |||||| |||||||||||||||||||||||| |||    
T  22479159 tgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatttcaaagata 22479060  T
Q  213 acacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||| ||||||||||||||||||||    
T  22479059 acacaaaaaactatgttacaaactactatgtttta 22479025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 21214256 - 21214381
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||   ||||| ||||||| |||| |||||||||||||| |||||| |||| |||||||||||||||||||||||||    
T  21214256 caaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatttcaaaaataac 21214355  T
Q  215 acaaaaaactatattacaaactacta 240  Q
    |||||||||||| |||||||||||||    
T  21214356 acaaaaaactatgttacaaactacta 21214381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 7886720 - 7886588
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| |||||||| || ||||||||||||||| |||||| |||| |||||||| ||||||||| ||||||    
T  7886720 caaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatttcaagaataac 7886621  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| | ||||||||||||||||||    
T  7886620 acaagaaactatgtcacaaactactatgtttta 7886588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 8097121 - 8096989
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| ||||||| ||| ||||||||||||||  |||||| |||||||||||||||||||||||  |||||    
T  8097121 caaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatttcaaggataac 8097022  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| || |||||||||||||||||    
T  8097021 acaagaaactatgttgcaaactactatgtttta 8096989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 10114926 - 10115058
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||| |||  |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||     
T  10114926 caaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataat 10115025  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||| ||| ||||||||||||||||||||    
T  10115026 acaaaaaattatgttacaaactactatgtttta 10115058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 22456191 - 22455979
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttccaaattataa 114  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||                     |||| ||    
T  22456191 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaa---------------------atta-aa 22456114  T
Q  115 tacaaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaata 212  Q
    | |||| |||||| ||||||||||||||  |||||| || |||| |||| |||||| ||||||| |||||  ||||||||||||||||||||||||  ||    
T  22456113 tgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatttcaaagtta 22456014  T
Q  213 acacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||| ||||||||||||||||||||    
T  22456013 acacaaaaaactatgttacaaactactatgtttta 22455979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 10252026 - 10252158
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||| |||  |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||     
T  10252026 caaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataat 10252125  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    ||||| || ||| ||||||||||||||||||||    
T  10252126 acaaacaattatgttacaaactactatgtttta 10252158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 30454827 - 30454696
Alignment:
Q  117 caaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||||| ||||||| ||||||| |||||| |||| ||||||||||||||||||  |||||    
T  30454827 caaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatttcaaggataac 30454729  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| || |||||||||||||||||    
T  30454728 acaagaaactatgttgcaaactactatgtttta 30454696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 247
Target Start/End: Original strand, 34194813 - 34195035
Alignment:
Q  5 tgtccaagaatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgctctctcttc 104  Q
    ||||| ||| ||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||                      
T  34194813 tgtcccagattataagcaaaaaagaccaacttttatcatttttaattatgttgtttcaaaaaattatcttttccaaaggaaa------------------ 34194894  T
Q  105 caaattataatacaaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttat 202  Q
       |||| ||| ||||||||||| | ||||||||  |||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  34194895 ---atta-aatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttat 34194990  T
Q  203 ttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||    ||| |||| ||||||| || |||||||||||||||||    
T  34194991 ttcatgggtaagacaagaaactatgttgcaaactactatgtttta 34195035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 16033090 - 16032981
Alignment:
Q  117 caaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||  ||||||||||||||||||||| || ||||||||||||||| |||||| |||||||||||||||||||||||  |||||    
T  16033090 caaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatttcaaggataac 16032991  T
Q  215 acaaaaaact 224  Q
    |||| |||||    
T  16032990 acaagaaact 16032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 46918316 - 46918184
Alignment:
Q  117 caaagtgcatttaatttgc--tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||||||||||  ||||||  ||||||||||||| ||||||||||| ||||||||||||||| |||||  |||||||||||||||||||| ||  |||||    
T  46918316 caaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttattttaaggataac 46918217  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| ||  ||||||||||||||||    
T  46918216 acaagaaactatgttgtaaactactatgtttta 46918184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 10014284 - 10014416
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||| |||| |||   ||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||     
T  10014284 caaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataat 10014383  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    ||||| || ||| ||||||||||||||||||||    
T  10014384 acaaacaattatgttacaaactactatgtttta 10014416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 47444076 - 47443945
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||| |||||  |||||| || |||| |||| |||| ||||||||| |||||| ||||| ||||||| |||||||||| |||||    
T  47444076 caaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatcttc-tataaaatttatttcaaagataac 47443978  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| |||||||||| |||||||||    
T  47443977 acaaaaaactatgttacaaactaatatgtttta 47443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 2994521 - 2994386
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcct----ataaaacttatttcaaaaa 210  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| |||||||    ||||||||||||||||  |    
T  2994521 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttccttcctataaaacttatttcaagca 2994423  T
Q  211 taacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||||| |||||||||||||| |||||    
T  2994422 taacacaaaaaactatgttacaaactactatatttta 2994386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 38401395 - 38401531
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||||| |||||||||| ||||||||  |||||| || ||||  ||| |||||||||||||  |||||| ||| |||||||||||||||||||| |||||    
T  38401395 caaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatttcaaagataac 38401494  T
Q  215 acaaaaaactata----ttacaaactactatgtttta 247  Q
    |||||||||||||    ||||||||||||||||||||    
T  38401495 acaaaaaactatatatgttacaaactactatgtttta 38401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 49583900 - 49583973
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  49583900 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagaaaaat 49583973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 6784359 - 6784464
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||| |||||||| ||| |||| |||| || ||||||||||  |||||| ||||||||||||| |||||| ||| ||||||||||||||||| |||||||    
T  6784359 ctctttttcatttattctataatcaactacgaatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaactatgttacaaa 6784458  T
Q  235 ctacta 240  Q
    ||||||    
T  6784459 ctacta 6784464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 23311673 - 23311584
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | |||||| |||||||||    
T  23311673 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaactata 23311584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 25242281 - 25242149
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||| |||||||   ||||| || |||| |||| | ||  |||||||| |||| | |||| ||||||||||||||| ||| |||||    
T  25242281 caaagtgcattcaatttgttctcttttttattttctctataatcaactatcaccgaaaattgttttttcatctttctataaaacttattttaaagataac 25242182  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| ||||||||||||||||||||    
T  25242181 acaaaaaactatgttacaaactactatgtttta 25242149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 579221 - 579133
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaac 223  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||  |||||||||||||||| ||||||| | ||||||||||||    
T  579221 ctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaacttttttcaaagaaaacacaaaaaac 579133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 6438124 - 6438216
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || |||||||| | ||||||||||||| |||||| |||||||||||| ||| ||||||| | ||||||||||||||||    
T  6438124 ctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaagcttttttcaaagaaaacacaaaaaactata 6438216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 36546583 - 36546675
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||| |||||| || |||| | || |||||||||||||    
T  36546583 ctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactata 36546675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 36561732 - 36561640
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||| |||||| || |||| | || |||||||||||||    
T  36561732 ctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaactata 36561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 30189622 - 30189704
Alignment:
Q  145 ttttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  30189622 ttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 30189704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 35963173 - 35963285
Alignment:
Q  117 caaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| |||||||||||| ||||  |||||||||| || |||||||| ||||||| ||||||| |||| | |||||||||||||||| || |||| | |||    
T  35963173 caaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactttttccaaacaaaac 35963272  T
Q  215 acaaaaaactata 227  Q
    |||||||||||||    
T  35963273 acaaaaaactata 35963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 11054394 - 11054302
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttattt-caaaaataacacaaaaaactata 227  Q
    |||||||||||||||| |||||||| | ||||||||||||| |||||  |||||||||||||||| ||| |||| | ||||||||||||||||    
T  11054394 tctctttcattttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaacttttttccaaagaaaacacaaaaaactata 11054302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 46711740 - 46711649
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||||| ||||||| | |||||||| |||| |||||| |||||||||||||||| ||||||| | ||||||||||| ||||    
T  46711740 ctctctttcattttttca-taaccaatagccaatgaatattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattata 46711649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 50651120 - 50651008
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||| ||||| || |||||||| |  |||||||||||| |||||| |||||||||||||||| || |||| | |||||||||||||||||| ||||    
T  50651120 ctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttgcaaagaaaacacaaaaaactatatttcaaa 50651021  T
Q  235 ctactatgtttta 247  Q
     |  |||||||||    
T  50651020 ttcttatgtttta 50651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 48291763 - 48291830
Alignment:
Q  21 caaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  48291763 caaaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 48291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 6784275 - 6784340
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||||||||    
T  6784275 aaaaaagactaacttttatcatatttaattat-ttttttcaaaaaattatctcttccaaagaaaaat 6784340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 7886793 - 7886727
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| || ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  7886793 aaaaaataccaacttttatcatatttaattatgttgttttaaaaaatcatcttttccaaagaaaaat 7886727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 30454900 - 30454834
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| || ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  30454900 aaaaaaaaccaacttttagcatatttaattatgttgtttcaaaaaattatcttttccaaaggaaaat 30454834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 10251946 - 10252019
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||||||| || ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  10251946 tataagcaaaaaataccaacttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaat 10252019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 17587783 - 17587852
Alignment:
Q  178 ttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    |||||| ||||||||||||||||||||||| ||||||| || |||||||||| |||| ||||||||||||    
T  17587783 ttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgtttta 17587852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 19464116 - 19464209
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatat 228  Q
    ||||||||||||||| | |||||||| ||  ||||||||||| ||||   |||||||||||||||| ||||||| | |||||||||||||||||    
T  19464116 ctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctataaaacttttttcaaagaaaacacaaaaaactatat 19464209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 23209463 - 23209390
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||| |||||| ||||||| ||||    
T  23209463 tataagcaaaaaagaccaacttttatcatatttaattatgttatttcaaaaaatcatctttcccaaagagaaat 23209390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 37042497 - 37042408
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||| ||| | ||||||||||||| |||||| |||||||||||||||| || |||  | ||||||||||||||||    
T  37042497 tctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactata 37042408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 37075000 - 37075093
Alignment:
Q  134 gctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||| |||||||||||| |||||||| | |||||||||||||  ||||| |||||||||||||||| || |||| | ||||||||||| ||||    
T  37075000 gctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcctataaaactttttccaaagaaaacacaaaaaattata 37075093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 2927208 - 2927417
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaatagtttgct--ctctcttccaaatt 110  Q
    ||||||| |||||||||| |||||||||||||||||||  |||| ||  ||||||| |||||||||||  |||| |  ||||||   |||| |  |||||    
T  2927208 aatataagcaaaaaagacaaacttttattatatttaatcttgtttttaaaaaaaatcatcttttccaataaaaact--tttgcttattctcat-gaaatt 2927304  T
Q  111 ataatacaaagtgcatttaatttgctctct-ttc-attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaa 208  Q
    | |||||||| | |||||||||| |||||| ||| |||||||  |||||||| | ||||||||||||  |||||| |||||| |||||||||||| ||||    
T  2927305 a-aatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccataaaacttattccaaa 2927403  T
Q  209 aataacacaaaaaa 222  Q
     | || ||||||||    
T  2927404 gaaaatacaaaaaa 2927417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 2994594 - 2994528
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||| |||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||    
T  2994594 aaaaatgacaaacttttatcgtatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 2994528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 38401315 - 38401381
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||| |||||||||  ||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  38401315 tataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaataatcttttccaaa 38401381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 28875450 - 28875539
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||| || |||||||| | ||||||||||||| |||||| ||||| |||||||||| || |||| | |||||||| |||||||    
T  28875450 tctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcttataaaactttttccaaagaaaacacaaataactata 28875539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 48291838 - 48291926
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttattt 204  Q
    |||||||||| ||||||||||||||  |||||||||  ||| |||| |||||||||||||  ||||||  |||||||||||||||||||    
T  48291838 aaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaacttattt 48291926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 6075122 - 6075214
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||  ||||||||   ||||||||||||| |||||||||||||| ||| |||| || |||| | ||||||||||| ||||    
T  6075122 ctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcctgtaacactttttccaaagaaaacacaaaaaattata 6075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 9264608 - 9264684
Alignment:
Q  151 caataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| || | ||||||||||||| |||||| ||||| |||||||||| ||||||| | ||||||||||||||||    
T  9264608 caataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactata 9264684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 14752291 - 14752199
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| |  |||||||||||| |||||| ||||||||||||  || || |||| | ||||||||||| ||||    
T  14752291 ctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaatttttttccaaagaaaacacaaaaaattata 14752199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 17587666 - 17587722
Alignment:
Q  32 aacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||  ||||||||||    
T  17587666 aacttttattatatttaattatgttgttttaaaaaatcatcttttttaaagaaaaat 17587722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 23209359 - 23209251
Alignment:
Q  139 ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactac 238  Q
    |||||||||| ||  |||| || ||||||| ||||||  |||| | |||| |||||||||||||||||| |||||||| | ||||||||| |||||||||    
T  23209359 ctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttatttcaagaataacacgagaaactatatcacaaactac 23209260  T
Q  239 tatgtttta 247  Q
     || |||||    
T  23209259 aatatttta 23209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 47864232 - 47864324
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||  |||| ||| |  |||||||||||| |||||| |||||||||||||||| ||||||| | ||  ||||||||||||    
T  47864232 ctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatgcaaaaaactata 47864324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 53270276 - 53270368
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| |  |||||||||||  |||| | |||| |||| |||||| ||||||| | ||||||||||||||||    
T  53270276 ctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttctatgaaacttttttcaaagaaaacacaaaaaactata 53270368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 7866565 - 7866474
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||| |||||||| |||||||| |  |||||||||||| |||||| ||||| |||||||||| ||||||| | || | |||||||||||    
T  7866565 tctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcttataaaacttttttcaaagaaaataaaaaaaactata 7866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 8097182 - 8097128
Alignment:
Q  34 cttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||    
T  8097182 cttttatcatatttaataatgttgtttcaaaaaattattttttccaaaggaaaat 8097128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 21214176 - 21214242
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||| |||||||||  ||||||||| | ||||||||||||| |||||||| |||||||||||||||    
T  21214176 tataagcaaaaaagatcaacttttatcacatttaattatgttttttcaaaatattatcttttccaaa 21214242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 10014224 - 10014277
Alignment:
Q  35 ttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  10014224 ttttatcatatttaattatgttttttcaaaagattatcttttccaaaggaaaat 10014277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 10114847 - 10114919
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||||||| || ||||||||| ||||||||||||||| |||||| | |||||||||||||||| |||||    
T  10114847 tataagcaaaaaatac-aacttttatcatatttaattatgttttttcaacagattatcttttccaaaggaaaat 10114919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 29676602 - 29676557
Alignment:
Q  43 tatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  29676602 tatttaattatgttttttcaaaaaattatcttttccaaaggaaaat 29676557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 32070189 - 32070254
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||  ||||||||| |||||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  32070189 aaaaagataaacttttatcatatttaactatgtagtttcaaaaaattattttttcaaaagaaaaat 32070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 44566970 - 44566898
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||||| ||||  ||||||||| |||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  44566970 tataaacaaagaagaaaaacttttatcatatttaattatgttg-ttcaaaaaatcatcttttctaaagagaaat 44566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 23910584 - 23910504
Alignment:
Q  147 ttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||| |||||||| | ||||||||||||  |||||| |||||||||||||||| || |||| | |||||||||| |||||    
T  23910584 ttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagctata 23910504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 27876088 - 27876024
Alignment:
Q  24 aaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||||| |||||||||||| || |||||||||||  |||||| |||||| ||||    
T  27876088 aaaagactaacttttatcatatttaattatattatttcaaaaaatcttctttttcaaagagaaat 27876024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 54725710 - 54725627
Alignment:
Q  113 aatacaaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactta 201  Q
    ||||||||||||||| ||||||||||||||  | |||||      ||| ||||||||||||||| |||||| |||||||||||||||||    
T  54725710 aatacaaagtgcattcaatttgctctcttttttattttct-----caataaccaatgaaaattgtttttacatcttcctataaaactta 54725627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 29235229 - 29235320
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||||| |||||||| | ||||||||||||  |||||| ||||||||| |||| | ||  ||| | || |||||||||||||    
T  29235229 tctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctattaaacgttttctaaagaaaatacaaaaaactata 29235320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 41476390 - 41476327
Alignment:
Q  164 ccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||  |||||| |||| ||||||||||| ||||||| | ||||||||||||||||    
T  41476390 ccaatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactata 41476327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 49584049 - 49584103
Alignment:
Q  192 ataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||||||||||||||| || |||||||| |||||||||||||||| |||||||||    
T  49584049 ataaaacttatttcaaagatgacacaaaa-actatattacaaactattatgtttta 49584103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 12128852 - 12128791
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    ||||| |||||||||||||||||||  ||||||||||||||| ||||||||||| || |||||    
T  12128852 tataagcaaaaaagactaacttttac-atatttaattatgttatttcaaaaaatcattttttc 12128791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 20847351 - 20847265
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||||||| || |||| |||  |||||||||||||| ||  || ||||||||| ||||||||| |||| | ||||||||||    
T  20847351 ctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttattccaaagaaaacacaaaaa 20847265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 47444159 - 47444083
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaatta---tgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| ||||||| |  ||||||||| |||||||||||   |||| ||||||||||||||||||||||||| |||||    
T  47444159 tataagcaaaaaatatcaacttttatcatatttaattactatgttttttcaaaaaattatcttttccaaaggaaaat 47444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 54725786 - 54725720
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||| |||||||||   |||||||| |||||||||||| || ||||||||||||||||||| ||||    
T  54725786 tataagcaaaaaagatctacttttatcatatttaattatattttttcaaaaaattatctttttcaaa 54725720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 34722683 - 34722622
Alignment:
Q  140 tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactta 201  Q
    |||||||||||  |||||||| | ||||||||||||| |||||| ||||| |||||||||||    
T  34722683 tttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 36189065 - 36189000
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| ||||||||||||||||| | || |||||||||||||  | || |||||||||||||    
T  36189065 aaccaatgagaattggttttacttctttccatgaaacttatttcaaggagaatacaaaaaactata 36189000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 26725074 - 26724982
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||  ||||| || |||| ||| ||||||||||||||| |||||| |||||  | |||||||||| |||| | ||||||||||| ||||    
T  26725074 ctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttattccaaagaaaacacaaaaaattata 26724982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 34105598 - 34105682
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||| | ||||| |||||| |||| | |||||||||||| ||| ||||| |||||||||||||    |||||||||||||||    
T  34105598 aaccaataagaattgtttttacatctttccataaaacttattacaagaataaaacaaaaaactataccttaaactactatgtttt 34105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 54464978 - 54464918
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataa 195  Q
    |||||||||| |||||| |||||||| | |||| |||||||| |||||| |||||||||||    
T  54464978 ctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctataa 54464918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 41935564 - 41935630
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaata 89  Q
    |||||| | ||||||||| ||||||||||||||| ||| ||||||| || |||| |||||| |||||    
T  41935564 aaaaaggccaacttttatcatatttaattatgttattttaaaaaatcatatttttcaaagagaaata 41935630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 7615077 - 7615032
Alignment:
Q  42 atatttaattatgttgtttcaaaaaattatcttttccaaagaaaaa 87  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| ||||    
T  7615077 atatttaattatgttatttcaaaaaatcatctttttcaaaggaaaa 7615032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 31126273 - 31126338
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||  |||||| |||| | ||||||||||||||||  | ||||||||||| ||||    
T  31126273 aaccaatgaaaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattata 31126338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 3972347 - 3972402
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    ||||||||||| |||||| |||||| |||||||||| |||||| | |||||||||||    
T  3972347 aatgaaaattgtttttacatcttcccataaaactta-ttcaaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 3997531 - 3997476
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaa 222  Q
    ||||||||||| |||||| |||||| |||||||||| |||||| | |||||||||||    
T  3997531 aatgaaaattgtttttacatcttcccataaaactta-ttcaaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 31836960 - 31837052
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||| |||||||| || | |||||| |  |||||||||||| |||| | | |||||||||||||| || |||| | || |||||||||||||    
T  31836960 ctctcattcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactata 31837052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 51309474 - 51309558
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||| | ||||| || ||| |||| |||| ||||||||| ||| || ||||||||||| ||||   ||||||||||||||||    
T  51309474 aaccaataagaattgtttatacatctttctatgaaacttattccaagaagaacacaaaaaattatacctcaaactactatgtttt 51309558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 6019 - 5887
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||| ||||||||  ||||||||| |||| |||| | ||| |||||||| |||||| |||||||||||||||||||||||  |||||    
T  6019 caaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatttcaatgataac 5920  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||||||||||||||||||||||    
T  5919 acaaaaaactatattacaaactactatgtttta 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 38260333 - 38260465
Alignment:
Q  117 caaagtgcatttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||||||||||||||  |||||||||| |||||||  || ||||||||||||||  ||||||  ||| |||||||||||||||||| ||||||    
T  38260333 caaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatttcaagaataac 38260432  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||||||||||||||| ||||||||    
T  38260433 acaaaaaactatattacaaactacaatgtttta 38260465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 35888112 - 35887980
Alignment:
Q  117 caaagtgcatttaatttgctctctttc--attttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||   ||||| || |||| |||| || ||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  35888112 caaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatttcaaagataac 35888013  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||| ||| ||||||||||||||||||||    
T  35888012 acaaaaaattatgttacaaactactatgtttta 35887980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 39170551 - 39170683
Alignment:
Q  117 caaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||  |||||||||||| ||||||| |||  || ||||||||||| |||||| ||||| |||||||||||||||||  |||||    
T  39170551 caaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatttcaaggataac 39170650  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||| ||||||| |||||||||||||| |||||    
T  39170651 acaataaactatgttacaaactactatatttta 39170683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 46760377 - 46760288
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||||||||    
T  46760377 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 46760288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 31769105 - 31768994
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||||||||  ||| ||||| || |||| |||| | |||||||||||| |||||| |||||||||||||||||||||||| || ||    
T  31769105 caaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatttcaaagatgac 31769006  T
Q  215 acaaaaaactat 226  Q
    ||||||||||||    
T  31769005 acaaaaaactat 31768994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 6191082 - 6191174
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| || |||||||| | ||||||||||||| |||||| |||||||||||||||| ||| ||| | ||||||||||||||||    
T  6191082 ctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttaaaagaaaacacaaaaaactata 6191174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 18102567 - 18102659
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||||| ||||||||   ||||||||||||| |||||| |||||||||||||||| ||||||| | ||||||||||| ||||    
T  18102567 ctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaattata 18102659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 39170472 - 39170543
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaa 86  Q
    ||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  39170472 tataaacaaaaaatatcaacttttattatatttaattatgttgttacaaaaaattatcttttcaaaagaaaa 39170543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 14805910 - 14805998
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | || |||||||||||||    
T  14805910 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt-tttcaaagaaaatacaaaaaactata 14805998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 15252904 - 15252992
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||| | || |||||||||||||    
T  15252904 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt-tttcaaagaaaatacaaaaaactata 15252992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 19912889 - 19912800
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||| | || ||||||||||| || |||| | ||||||||||||||||    
T  19912889 tctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactttttccaaagaaaacacaaaaaactata 19912800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 22632126 - 22632227
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    ||||||| ||||||||| |||||||| | ||||||||||||| |||||| |||||| || |||||||||||||| | |||||||||| ||||  ||||||    
T  22632126 ctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttatttcaaagaaaacacaaaaatctatgctacaaa 22632225  T
Q  235 ct 236  Q
    ||    
T  22632226 ct 22632227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 25737747 - 25737658
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| | |||||| |||||||||    
T  25737747 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacacaaaactata 25737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 45485995 - 45486084
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||  |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  45485995 tctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 45486084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 3777996 - 3778126
Alignment:
Q  118 aaagtgcatttaatttgct--ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||| ||||||||  |||||||||||| |||||||||||  | |||||||||||  |||||  | |||||  |||| |||||||||  ||||||    
T  3777996 aaagtgcattcaatttgctttctctttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatttcaaggataaca 3778095  T
Q  216 caaaaaactatattacaaactactatgtttt 246  Q
    ||| ||||||| || ||||||||||||||||    
T  3778096 caataaactatgttgcaaactactatgtttt 3778126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 10248592 - 10248671
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaa-aaaactatattacaaactacta 240  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||  ||||||||| |||||||| |||||||||||||    
T  10248592 aaccaatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactacta 10248671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 35888185 - 35888118
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaata 89  Q
    ||||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  35888185 aaaaaagaccaactttcatcatatttaattatgttttttcaaaaaattatcttttccaaaggaaaata 35888118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 20123802 - 20123689
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaac 235  Q
    |||||||||||||||| |||| ||| | ||||||||||||| |||||| |||| ||||||||||| || |||| |  ||||||||||||||| | ||||     
T  20123802 tctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctataaaactttttccaaagaatacacaaaaaactatactccaaat 20123703  T
Q  236 tactatgttttact 249  Q
    |  |||||||||||    
T  20123702 tcttatgttttact 20123689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 31769177 - 31769112
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  31769177 aaaaagaccaacttttatcatatttaattatgttttttcaaaatattatcttttccaaaggaaaat 31769112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 35923292 - 35923375
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| |||| ||||||||||| || |||| | ||||||||||    
T  35923292 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacacaaaaa 35923375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 25944613 - 25944699
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||| |||||||| ||||||||   ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||    
T  25944613 ctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaa 25944699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 12632467 - 12632375
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||| |||||||| | | |||| | ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||| |||||||||||    
T  12632467 ctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactata 12632375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 22369170 - 22369225
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  22369170 aaaaaaaactaacttttatcatatttaattatgttttttcaaaaaatcatcttttc 22369225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 4910756 - 4910670
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    ||||||||||||||||| |||| ||| | ||||||||||||  |||||| |||||||||||||||| ||  ||| | ||||||||||    
T  4910756 ctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactttttctaaagaaaacacaaaaa 4910670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 24151724 - 24151638
Alignment:
Q  117 caaagtgcatttaatttgctctct-ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttat 202  Q
    |||||| |||| |||||||||||| ||  |||| ||||||||||| || || ||||||||| |||||| ||||||||||||||||||    
T  24151724 caaagtacattcaatttgctctctctttcttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaacttat 24151638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 38260273 - 38260319
Alignment:
Q  35 ttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||    
T  38260273 ttttatgatatttaattatattgtttcaaaaaattatcttttccaaa 38260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 9158128 - 9158201
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    ||||||||||||||||| |||||||   |||| |||||||| |||||| |||||||||||||||| ||| |||||    
T  9158128 tctctttcattttttca-taaccaatggccaaagaaaattgtttttacatcttcctataaaactttttttaaaaa 9158201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 35068954 - 35068872
Alignment:
Q  153 ataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaa-aaaactatattacaaa 234  Q
    |||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||||| | ||||||| ||||||||||| ||||    
T  35068954 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 47557723 - 47557630
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttattt--caaaaataacacaaaaaactata 227  Q
    |||||||||||||||| ||||  || | ||||||||||||| |||||| ||||||||||||  || |||   ||||| ||||||||||||||||    
T  47557723 tctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctataaattttttttaaaaaaaaaaacacaaaaaactata 47557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 25651475 - 25651422
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    |||||||||||||||||| ||||||| ||| ||| ||||||||||| |||||||    
T  25651475 aaaaagactaacttttatcatatttagttaagttttttcaaaaaatcatctttt 25651422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 39348720 - 39348794
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaatt-atcttttccaaagaaaaat 88  Q
    ||||||| |||||||||| |||||||||  ||||  ||| ||||||||||||||||| ||||||||||||| |||||    
T  39348720 aatataagcaaaaaagaccaacttttatgctatt--attgtgttgtttcaaaaaattaatcttttccaaagtaaaat 39348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 47779628 - 47779732
Alignment:
Q  124 catttaatttgctct--ctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||| ||||  |||| |||||||| |||||||    ||||||||||||| |||||| |||||| || |||||||||  ||| | ||||||||||    
T  47779628 catttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccatgaaacttattctaaagaaaacacaaaaa 47779727  T
Q  222 actat 226  Q
    |||||    
T  47779728 actat 47779732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 4069041 - 4069105
Alignment:
Q  136 tctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactt 200  Q
    |||||| |||||| || |||||||| ||||||||||||||  |||||| |||| |||||||||||    
T  4069041 tctcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactt 4069105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 24151802 - 24151750
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaa 67  Q
    ||||| |||||||||| ||||||||| |||||||||||| |||||| ||||||    
T  24151802 tataagcaaaaaagaccaacttttatcatatttaattatattgttttaaaaaa 24151750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 33153098 - 33153182
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttt 246  Q
    ||||||| | ||||| |||||| |||| | |||||| ||||||||| || ||||||||||| |||| | ||||||| ||||||||    
T  33153098 aaccaataagaattgtttttacatctttccataaaatttatttcaagaagaacacaaaaaattatacttcaaactattatgtttt 33153182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 3777945 - 3777988
Alignment:
Q  45 tttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||    
T  3777945 tttaattatattgtttcaaaaatttatcttttccaaaggaaaat 3777988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 35084203 - 35084091
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| |||||| |||||| ||||  ||||||||| || |||| ||  | ||||| | ||||| |||||| ||||  ||| ||||||||||||| || |||    
T  35084203 caaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttatttcaagaagaac 35084104  T
Q  215 acaaaaaactata 227  Q
    |||||||||||||    
T  35084103 acaaaaaactata 35084091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 40560441 - 40560506
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| ||||  |||||| |||| ||||||||||||||||||  | ||||||||||| ||||    
T  40560441 aaccaatgagaattatttttacatctttctataaaacttatttcaaggagaacacaaaaaattata 40560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 29713226 - 29713326
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    |||||||||||||| || ||||  || | ||||||||||||| ||||||  ||| |||| ||| |||||  ||| || |||||| |||||||| ||||||    
T  29713226 ctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaa 29713325  T
Q  235 c 235  Q
    |    
T  29713326 c 29713326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 16524395 - 16524518
Alignment:
Q  117 caaagtgcatttaatttgctctcttt-cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    ||||||||||| |||||| ||||||| |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  16524395 caaagtgcattcaatttgttctcttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataaca 16524494  T
Q  216 caaaaaactatattacaaactact 239  Q
    ||||||||||| ||||||||||||    
T  16524495 caaaaaactatgttacaaactact 16524518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 4032002 - 4032127
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| |||||| ||||||||||||||||| |||||    
T  4032002 caaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatttcaaagataac 4032101  T
Q  215 acaaaaaactatattacaaactacta 240  Q
    |||||||||||| |||||||||||||    
T  4032102 acaaaaaactatgttacaaactacta 4032127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 4987958 - 4988083
Alignment:
Q  117 caaagtgcatttaatttgctctc--tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    |||| |||||| |||||||||||  ||||||||| || |||| |||| |||||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  4987958 caaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatttcaaagataac 4988057  T
Q  215 acaaaaaactatattacaaactacta 240  Q
    |||||||||||| |||||||||||||    
T  4988058 acaaaaaactatgttacaaactacta 4988083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 16013571 - 16013454
Alignment:
Q  122 tgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaa 219  Q
    |||||| ||||||||||||||  |||||| || |||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||    
T  16013571 tgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaa 16013472  T
Q  220 aaactatattacaaacta 237  Q
    ||||||| ||||||||||    
T  16013471 aaactatgttacaaacta 16013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 3888442 - 3888565
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||| |||||||  |||||| || |||| |||| ||| |||||||||| || ||| |||||||||||||||||||||||| |||||    
T  3888442 caaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaacttatttcaaatataac 3888541  T
Q  215 acaaaaaactatattacaaactac 238  Q
    ||||| |||||| |||| ||||||    
T  3888542 acaaataactatgttacgaactac 3888565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 35129176 - 35129086
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggtt-ttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| ||||||||||||||| || |||| |||||||||||||||| || |||| | ||||||||||||||||    
T  35129176 tctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaactata 35129086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 3888362 - 3888435
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  3888362 tataagcaaaaaagaccaacttttatcatatttaattatgttttttcaaaaaattatctttttcaaaggaaaat 3888435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 247
Target Start/End: Complemental strand, 7275023 - 7274887
Alignment:
Q  113 aatacaaagtgcatttaatttgctctct--ttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaa 210  Q
    |||||||| | |||||||||| ||||||  ||||||||||| |||||||| | ||||||||||||| |||||| |||||| || ||||||||| |||| |    
T  7275023 aatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttattccaaaga 7274924  T
Q  211 taacacaaaaaactatattacaaactactatgtttta 247  Q
     || ||||||||||||  |||||| |  |||||||||    
T  7274923 aaatacaaaaaactatgctacaaattcttatgtttta 7274887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 11082366 - 11082277
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| ||| |||||||||||| || |||| | ||||||||||||||||    
T  11082366 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttttccaaagaaaacacaaaaaactata 11082277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 21542458 - 21542547
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||| ||||||| |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  21542458 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactata 21542547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 15830711 - 15830842
Alignment:
Q  118 aaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataaca 215  Q
    |||||||||| ||||||| ||||||  |||||| ||   || |||| | |||||||||||  |||||| ||||||||| |||||||||| ||||||||||    
T  15830711 aaagtgcattcaatttgcactctttttcattttatctgcaatcaactatcaatgaaaattttttttacatcttcctattaaacttattttaaaaataaca 15830810  T
Q  216 caaaaaactatattacaaactactatgtttta 247  Q
    ||||||| ||| ||| |||||| |||||||||    
T  15830811 caaaaaattatgttagaaactattatgtttta 15830842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 1130454 - 1130520
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    ||||| ||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  1130454 tataagcaaaaaaaaccaacttttatcatatttaattacgttgtttcaaaaaattatcttttccaaa 1130520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 34177762 - 34177653
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| ||| ||||||||  || || |||| | |||||||||||||||||| |||| |     
T  34177762 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaatttttttccaaagaaaacacaaaaaactatattccaaattc 34177663  T
Q  238 ctatgtttta 247  Q
     |||||||||    
T  34177662 ttatgtttta 34177653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 3095838 - 3095752
Alignment:
Q  140 tttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||| |||| ||| | ||||||||||||| |||||| |||||||||||||||| || |||| | ||||||||||||||||    
T  3095838 tttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactt-ttccaaagaaaacacaaaaaactata 3095752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 5300809 - 5300751
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    |||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  5300809 aaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaa 5300751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 5822245 - 5822171
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatg-ttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||||||||||||||||| |||||| ||||||||||||| || ||| ||||||| |||||||||||||| ||||    
T  5822245 tataaacaaaaaagactaatttttatcatatttaattatgtttttttaaaaaaatcatcttttccaaagagaaat 5822171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 4987878 - 4987951
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    |||||| ||||||||||||||||||| ||||| || |||||| ||| ||||||||||||||| ||||| |||||    
T  4987878 tataaataaaaaagactaacttttatcatattcaaatatgtttttttaaaaaattatctttttcaaaggaaaat 4987951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 5881976 - 5881908
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaaga 83  Q
    |||||||||||| |||||| |||||| ||||||||||||||| ||  ||||||| ||||||||||||||    
T  5881976 tataaacaaaaatgactaatttttatcatatttaattatgtttttaaaaaaaatcatcttttccaaaga 5881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 16655254 - 16655333
Alignment:
Q  166 aatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgttt 245  Q
    ||||||||||| |||||  |||| |||| |||||||||  ||| ||||||||| ||||||||||| ||||||||||||||    
T  16655254 aatgaaaattgattttaactctttctatgaaacttattctaaagataacacaataaactatattataaactactatgttt 16655333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 16870889 - 16870804
Alignment:
Q  162 aaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaactactatgtttta 247  Q
    ||||||| ||| ||| |||||  |||| |||| |||||||||| ||| ||||||||||||||  ||||| ||||||||||||||||    
T  16870889 aaccaataaaagttgattttaaatctttctatgaaacttattttaaagataacacaaaaaacagtattataaactactatgtttta 16870804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 15830637 - 15830697
Alignment:
Q  22 aaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaag 82  Q
    ||||||||| || |||||| ||||||||||| ||| |||||||||||||| ||||||||||    
T  15830637 aaaaaagacaaatttttatcatatttaattacgttttttcaaaaaattattttttccaaag 15830697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 4031922 - 4031984
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttc 77  Q
    ||||| || ||||||| |||||| || ||||||||||||||| |||| |||||||||||||||    
T  4031922 tataagcataaaagaccaactttaatcatatttaattatgttttttcgaaaaattatcttttc 4031984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 13854905 - 13854852
Alignment:
Q  23 aaaaagactaacttttattatatttaattatgttgtttcaaaaaattatctttt 76  Q
    |||||||| ||||||||| |||||||||||| |||||| |||||| ||||||||    
T  13854905 aaaaagaccaacttttatcatatttaattatattgtttgaaaaaactatctttt 13854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 5300741 - 5300658
Alignment:
Q  113 aatacaaagtgcatttaatttgctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaactta 201  Q
    ||||||||||||||| |||||||||| |||  | |||||      ||| ||||||||||||||| |||||| |||||||||||||||||    
T  5300741 aatacaaagtgcattcaatttgctcttttttttattttct-----caataaccaatgaaaattgtttttacatcttcctataaaactta 5300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 30794316 - 30794224
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||  ||||| || || ||||| | |||||||||| || |||||| ||||||||||||||||||| |||| | |||| |||||| ||||    
T  30794316 ctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctataaaacttattccaaataaaacataaaaaattata 30794224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 12461544 - 12461454
Alignment:
Q  144 attttttcaataaccaacaaccaatgaaaattggttttacttcttcctat-aaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    ||||| || |||||||| | ||||||||||||| |||||| |||| |||| ||||||||||||||| | || | ||||||||||||| ||||    
T  12461544 attttctccataaccaatagccaatgaaaattgtttttacatctttctataaaaacttatttcaaagaaaata-aaaaaactatattccaaa 12461454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 16524343 - 16524381
Alignment:
Q  43 tatttaattatgttgtttcaaaaaattatcttttccaaa 81  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  16524343 tatttaattatgttttttcaaaaaattattttttccaaa 16524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 30949067 - 30949133
Alignment:
Q  13 aatataaacaaaaaagactaacttttattatatttaattatgttgtttcaaa-aaattatcttttccaa 80  Q
    ||||||| ||||||||||||||||||||  |||||  ||||||| ||||||| |||| |||||||||||    
T  30949067 aatataagcaaaaaagactaacttttatgctattt--ttatgttttttcaaacaaatcatcttttccaa 30949133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 3185 - 3317
Alignment:
Q  117 caaagtgcatttaatttgctctcttt--cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataac 214  Q
    ||||||||||| |||||| | |||||  |||||| || |||| |||| ||||||| |||||| |||||  |||||||||||||||||||||||| |||||    
T  3185 caaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatttcaaagataac 3284  T
Q  215 acaaaaaactatattacaaactactatgtttta 247  Q
    |||||||||||| ||||||||||||||||||||    
T  3285 acaaaaaactatgttacaaactactatgtttta 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 3105 - 3178
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaattatcttttccaaagaaaaat 88  Q
    ||||| |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  3105 tataagcaaaaaagatcaacttttatcatatttaattatgttttttcaaaaaattatcttttccaaagcaaaat 3178  T

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Target: scaffold0010 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 161040 - 160931
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaacta 237  Q
    ||||||||||| |||||||| || ||||||||||||||| ||||||  ||| |||| |||||||||||||  ||||||||| ||||||| || |||||||    
T  161040 tctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaacta 160941  T
Q  238 ctatgtttta 247  Q
    ||||||||||    
T  160940 ctatgtttta 160931  T

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Target: scaffold0774 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 3552 - 3460
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaa-ataacacaaaaaactata 227  Q
    ||||||||||||||||| |||||||| | ||||||||||||  |||||| |||||||||||||||| |||||||| | ||||||||||||||||    
T  3552 ctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactt-tttcaaaagaaaacacaaaaaactata 3460  T

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Target: scaffold0300 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 694 - 605
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| |||||||| | ||||||||||||| |||||| ||| |||||||||||| ||||||| | |||||| |||||||||    
T  694 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacataaaactata 605  T

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Target: scaffold0045 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 227
Target Start/End: Original strand, 77997 - 78086
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    |||||||||||||| ||||||||   ||||||||||||| |||||| |||||||||| ||||| ||||||| | ||||||||||||||||    
T  77997 tctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaactata 78086  T

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Target: scaffold0442 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 10082 - 10194
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    ||||||||||||||||| |||||||| |  |||||||||||| |||||| |||||||||||||||| ||  ||| | |||||||||||||| ||| ||||    
T  10082 ctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaactacattccaaa 10181  T
Q  235 ctactatgtttta 247  Q
     |  |||||||||    
T  10182 ttcttatgtttta 10194  T

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Target: scaffold0132 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 1051 - 1141
Alignment:
Q  137 ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| |||||||| |  ||||||||| || |||||| |||| ||||||||||| ||| ||||| ||||||||||||||||    
T  1051 ctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactata 1141  T

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Target: scaffold0132; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 9011 - 9101
Alignment:
Q  137 ctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||||||||| |||||||| |  ||||||||| || |||||| |||| ||||||||||| ||| ||||| ||||||||||||||||    
T  9011 ctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaacttttttaaaaaaaaacacaaaaaactata 9101  T

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Target: scaffold0062 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 44895 - 44783
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactatattacaaa 234  Q
    ||||||||||||||||| |||||||| | ||||||||||||| ||||   | |||||||||||||| || |||| | ||||||||||| |||| | ||||    
T  44895 ctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcctataaaactttttccaaagaaaacacaaaaaaatatactccaaa 44796  T
Q  235 ctactatgtttta 247  Q
     || |||||||||    
T  44795 ttattatgtttta 44783  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 154901 - 154984
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaa 221  Q
    |||||||||||||| |||||||| | |||||| |||||| |||||| |||| ||||||||||| ||||||| | || |||||||    
T  154901 tctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatacaaaaa 154984  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 157831 - 157922
Alignment:
Q  135 ctctctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactat 226  Q
    |||||||| |||||||| ||||||||   ||||||||||||| |||||| ||| || || ||||||||| |||| | |||||||||||||||    
T  157831 ctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttattccaaagaaaacacaaaaaactat 157922  T

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Target: scaffold0111 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 40224 - 40308
Alignment:
Q  143 cattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaactata 227  Q
    ||||||||| |||||||| | ||||||||||||| ||||||  ||| |||||||| ||||| |||| | |||||||||| |||||    
T  40224 cattttttctataaccaatagccaatgaaaattgtttttacaactttctataaaatttattccaaagaaaacacaaaaagctata 40308  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 22771 - 22718
Alignment:
Q  15 tataaacaaaaaagactaacttttattatatttaattatgttgtttcaaaaaat 68  Q
    ||||| |||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  22771 tataagcaaaaaagacaaacttttgttatacttaattatgttatttcaaaaaat 22718  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 160290 - 160376
Alignment:
Q  138 tctttcattttttcaataaccaacaaccaatgaaaattggttttacttcttcctataaaacttatttcaaaaataacacaaaaaact 224  Q
    |||| ||||||| | |||||||| | |||||||||| ||||||||| |||||| || ||  ||||| |||| | |||||||||||||    
T  160290 tcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccatgaattttattccaaagaaaacacaaaaaact 160376  T

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