View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2640_low_1 (Length: 964)
Name: NF2640_low_1
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 892; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 892; E-Value: 0
Query Start/End: Original strand, 17 - 955
Target Start/End: Original strand, 9229230 - 9230169
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9229230 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
9229329 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
9229330 |
gtgaattgcaaggcttctgttttcttctggtctattaaaagaaataggtttctcccccgttaggagctctgccagtactaccccgaagctataaacatca |
9229429 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
9229430 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcatagtatgatcaagtggaacca |
9229529 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9229530 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
9229629 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
9229630 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattattttccttttcaatactagtgtgcatcaaa |
9229729 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9229730 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
9229829 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9229830 |
gggacaaaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
9229929 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagcagtt |
816 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9229930 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagtagtt |
9230029 |
T |
|
| Q |
817 |
cctgatgcg-cttctcttttagaaagttggcgtagcaaaatgaaaccgccattttgtttaaagaatttctcttttagtttcaagagttttcttctttgat |
915 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9230030 |
cctgatgcgtcttctcttttagaaagttggcgtagcaaaatgaaaccgccattttgtttaaagaatttctcttttagtttcaagagttttcttctttgat |
9230129 |
T |
|
| Q |
916 |
ataacatgtacaacgatgaactagccacagatagaataat |
955 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9230130 |
ataacatgtacaacgaggaactagccacagatagaataat |
9230169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 17 - 812
Target Start/End: Original strand, 9161436 - 9162231
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| | ||||| | | || | | |||||||||| || || |
|
|
| T |
9161436 |
caagaatagcaacctccttaatctcctccttgttttcatcatttaaaataccaacttgaatagcttcaaaaattctatcttgttttaaacaagacaaaaa |
9161535 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||| || ||||| || | ||||||||||| ||||||||||||| |||||| || ||||| || | |||||| || ||||| || ||||||||||||||| |
|
|
| T |
9161536 |
gtgcatagcaagactgatattctcttctggcctattaaaagaaagaggtttgtctcccgtaagaagctctgcaagaactacaccaaagctataaacatca |
9161635 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || |||||||| || ||||||||||||||||||| || |||||| || || ||||||||||||| |
|
|
| T |
9161636 |
cttttctctgttagttgatgtgtttgcatatactccggatctaagtaaccaagagttccttgtaccattgttgctatctcggtttgatcaagtggaacca |
9161735 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
| || ||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||| || ||||||||||||||||| |||| |||||||| |
|
|
| T |
9161736 |
acctcgaagctccaaaatcagaaacttttgcattgtaattgtcatctaagagaatgttggtactcttaacatctctatggataataggtattgatgcaga |
9161835 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
|||||||| ||| ||||||||||| ||| | || ||||||||| ||||||| ||||||||| ||| ||| ||||| || || || || | || || ||| |
|
|
| T |
9161836 |
tgaatgtaaatacgataaagctccggctgtctctgctgctatctttaaacgtgttttccatgttggattgtttgctttatctttagtattatgtatgaaa |
9161935 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|||||||| ||||||||||||| |||||||| || | ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9161936 |
tcgaaaagtgtaccattgctaacgaattcatacaccaacgaaggaacttctgtctctaaacaacatcccaagagtttgacaacatttctatgatttattt |
9162035 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
||||||||||||| ||||| || ||||| ||||| | ||| | ||||| ||||||||||| || |||| || || || |||| |||| || | ||| |
|
|
| T |
9162036 |
gggacagaacaactacctcgttaatgaactgctcaatttgatttgcatctattattttggattttttgacagcgacgattttgttatctggtaagactcc |
9162135 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagc |
812 |
Q |
| |
|
|||| |||| ||||| |||||||||||||| || ||||| || || || ||||| ||||| |||||||| ||||| |||||| |||| |||||||| |
|
|
| T |
9162136 |
tttgaaaactgtaccaaaacctcctctgccgatgattaagctatcatcgtagtttttggtggctttctttagttcctcttctgtgaatatttgagc |
9162231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 918
Target Start/End: Complemental strand, 9119016 - 9118114
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||| | ||||| | | | || | | |||||||||| ||||| |
|
|
| T |
9119016 |
caagaatagcaacctccttaatctcttccttgttatcatcattcaaaattccaacttgaatagcttcaaaaagtttatcttgttttaaacaagacaagaa |
9118917 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||| || ||||| || || |||||||||| || |||||| || |||||| || || ||||| | |||||| || ||||| || ||||||||||||||| |
|
|
| T |
9118916 |
gtgcatagcaagactaatggtctcttctggcctgttaaaatcaagaggtttgtcacctgttagaagctctgcaagaactactccaaagctataaacatca |
9118817 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
|||||||| |||| ||| || |||||||| || ||||| ||||| || ||||| |||||||||||||| || |||||| || || ||||||||||||| |
|
|
| T |
9118816 |
cttttctcggttaattgatgcgtttgcatgtactctgggtctaagtatccaagtgttccttgtaccactgttgctatctcggtttgatcaagtggaacca |
9118717 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
|| | ||||| || ||||| || ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| || |||||||| |
|
|
| T |
9118716 |
atttggaagctccgaaatcggaaacttttgcagtgtaattgtcatccaagagaatgttggtactcttaacatctctatggataattggaaatgatgcaga |
9118617 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
|||||||||||| ||||||||||| ||| | || ||||||||||||| ||| |||| |||| ||| ||||||| || | || || | || || ||| |
|
|
| T |
9118616 |
tgaatgtagatacgataaagctccagctgtctctgctgctatccttagacgtgtttcccatcttggattatttattttattcttagtattttgtatgaaa |
9118517 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|||||||| ||||| | ||||| |||||||| || | ||||||||| |||||| |||||||| || || |||||||||||||| ||||||||||||| |
|
|
| T |
9118516 |
tcgaaaagtgtaccgtggctaacgaattcatagaccaaggaaggaacttctgtctctaaacaacaccctaaaagtttgacaacattcctatgatttattt |
9118417 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||| | ||| | || || |||||| ||||||| |||| || || || ||||| || | || || ||| |
|
|
| T |
9118416 |
gggacagaataactacctcattaatgaattgctcgatttgatttgcgtctattattctggactttttgacagccacgattctgttatcgggtaaaactcc |
9118317 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagcagtt |
816 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||| ||||| || || || ||| ||||||||||||| |||||||| | |||| |||| || ||||| | | |
|
|
| T |
9118316 |
tttgaaaattgtaccgaaacctcctcttccaatgattaagctttcgtcgtagctgttggtagcttttttaagttccttttctgtgaatatctgagctgat |
9118217 |
T |
|
| Q |
817 |
cctgatgcg-cttctcttttagaaagttggcgtagcaaaatgaaaccgccattttgtttaaagaatttctcttttagtttcaagagttttcttctttgat |
915 |
Q |
| |
|
|| | | |||||||| || | |||| |||||||||||||||| |||||||||| ||||||||| | ||||||||| | |||||||||| |||| | |
|
|
| T |
9118216 |
tgagacgtgtcttctcttgtaaagagtttttgtagcaaaatgaaaccaccattttgttgaaagaatttttgttttagtttgatgagttttcttttttggt |
9118117 |
T |
|
| Q |
916 |
ata |
918 |
Q |
| |
|
||| |
|
|
| T |
9118116 |
ata |
9118114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 19 - 883
Target Start/End: Original strand, 9155526 - 9156391
Alignment:
| Q |
19 |
agaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaagt |
118 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||| | ||||| | | || | | |||||||||| || |||| |
|
|
| T |
9155526 |
agaatagcaacctctttaatctcctccttgttttcatcatttaagataccaacttgaatagcttcaaaaattctatcttgttttaaacaagacaaaaagt |
9155625 |
T |
|
| Q |
119 |
gaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatcact |
218 |
Q |
| |
|
| |||||||| || | |||||||||| ||||||||||| | |||||| || || || || | ||| || |||||||| || |||||||| |||||||| |
|
|
| T |
9155626 |
gcattgcaagactaatactctcttctggcctattaaaagatagaggtttatctcctgtcagaagctccgcaagcactactccaaagctatagacatcact |
9155725 |
T |
|
| Q |
219 |
tttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaaccaat |
318 |
Q |
| |
|
|||||| |||| ||| || ||||||||||| |||||||||| || |||||||||||||| |||| || |||||| || || ||||||||||| || |
|
|
| T |
9155726 |
tttctcggttaattgatgagtttgcatatactctggatctaggtatccaagagttccttgaaccattgttgctatctcggtttgatcaagtggaactaac |
9155825 |
T |
|
| Q |
319 |
cttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcagatg |
418 |
Q |
| |
|
|| ||||| |||||||| || ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
9155826 |
ctcgaagctccaaaatcggaaactttcgctgtgtaattgtcatccaagagaatgttggtacttttgacatctctatggataatcggtattgatgcagatg |
9155925 |
T |
|
| Q |
419 |
aatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaatc |
518 |
Q |
| |
|
|||||||||| ||||||||||| ||| | || ||||||||| ||||||| ||||||||| ||| ||| |||| || || || || | || || ||||| |
|
|
| T |
9155926 |
aatgtagatacgataaagctccggctgtctctgctgctatctttaaacgggttttccatgttggattgtttgttttatctttagtactatgtatgaaatc |
9156025 |
T |
|
| Q |
519 |
gaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgg |
618 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| | ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9156026 |
aaaaagtgtaccattgctaacgaattcataaaccaaggaaggaacttctgtctctaaacaacatcccaagagtttgacaacatttctgtgatttatttgg |
9156125 |
T |
|
| Q |
619 |
gacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcctt |
718 |
Q |
| |
|
|| || ||||| |||||||| || || ||||| | ||| | ||||| |||||||| || || || | ||||| || ||||||| | || || ||||| |
|
|
| T |
9156126 |
gataggacaactacctcattaataaactgctcgatttgatttgcatctattatttttgatttttttacagcaacgattttgttgtcgggtaaaactcctt |
9156225 |
T |
|
| Q |
719 |
tgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagcagttcc |
818 |
Q |
| |
|
|| |||| ||||| ||||||||||||||||| ||||| | || || ||||| ||||| |||||||||||||| ||||| |||| |||| ||| | | |
|
|
| T |
9156226 |
tgaaaactgtaccaaaacctcctctgccaatgattaagttttcatcgtagtttttggtggctttcttaagttcctcttcagtgaatatttcagctgattg |
9156325 |
T |
|
| Q |
819 |
tgatgcg-cttctcttttagaaagttggcgtagcaaaatgaaaccgccattttgtttaaagaattt |
883 |
Q |
| |
|
|| | | |||||||| |||| ||||| ||||||||||| |||| |||||||||| ||||||||| |
|
|
| T |
9156326 |
cgaggtgtcttctcttgtagatagttgttgtagcaaaatggaaccaccattttgttgaaagaattt |
9156391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 17 - 812
Target Start/End: Original strand, 9170262 - 9171057
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||| ||||| |||| || |||||||||| | ||||| | | | || | | |||||||||| || || |
|
|
| T |
9170262 |
caagaatagcaacctccttaatctctttcttgttatcatcgttcacaaatccaacttgaatagcttcaaaaaatttatcttgttttaaacaagacaaaaa |
9170361 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||| || ||||| || || |||||||||| ||||||||||||| |||||| || || ||||| | |||||| || ||||| || ||||||||||||||| |
|
|
| T |
9170362 |
gtgcatagcaagactaatggtctcttctggcctattaaaagaaagaggtttgtcacctgttagaagctctgcaagaactactccaaagctataaacatca |
9170461 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
||||| || |||| || |||||||||||||| || |||||||| || ||||| |||||||| |||| || |||||| || || ||||||||||||| |
|
|
| T |
9170462 |
cttttttcggttaatttatgtgtttgcatatactcgggatctaagtatccaagtgttccttgcaccattgttgctatctctgtttgatcaagtggaacca |
9170561 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
|||||||||| || || || || ||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | |||||||| |
|
|
| T |
9170562 |
atcttgaagctccgaagtcggaaactttggcagtgtaattgtcatccaagagaatgttggtactcttaacatctctatggataattggaattgatgcaga |
9170661 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
|||||||||||| ||||||||||| ||| | || |||||||||||||| || ||||||||| ||| |||||||| || || || | | || || ||| |
|
|
| T |
9170662 |
tgaatgtagatacgataaagctccagctgtctctgctgctatccttaagcgggttttccatgttggattatttgttttatctttagtgctttgtatgaaa |
9170761 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|||||||| ||||| ||||||| |||||| || || | | ||||||||| |||||| | |||||| || | ||||||||||||||| ||||||||||||| |
|
|
| T |
9170762 |
tcgaaaagtgtaccgttgctaacaaattcgtacaccaatgaaggaacttctgtctctagacaacaccctaggagtttgacaacattcctatgatttattt |
9170861 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
||| ||||||||| |||||||| ||||||||||| | ||| | || || ||||||||||| || || | || || || ||||||| | || || ||| |
|
|
| T |
9170862 |
gggtcagaacaactacctcattaatgaattgctcaatttgatttgcgtcaattattttggatttttttacagcgacgattttgttgtcaggtaaaactcc |
9170961 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagc |
812 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||| || || || ||||| ||||| |||||||||||||| |||||| |||| |||||||| |
|
|
| T |
9170962 |
tttgtaaactgtaccaaaacctcctctgccaatgattaagctttcatcgtagtttttggtggctttcttaagttcctcttctgtgaatatttgagc |
9171057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 17 - 913
Target Start/End: Original strand, 9218345 - 9219242
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
||||||||| ||| ||||||||||| | |||||| |||||||| ||||| |||||||||| | | ||| | | | || | | |||||||||| || || |
|
|
| T |
9218345 |
caagaatagaaacctccttaatctctttcttgttttcatcattgaaaattccaacttgaatagcatcaaaaagtttatcttgttttaaacaagacaaaaa |
9218444 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||| || ||||| || || |||||||||| || |||||||||| |||||| | || ||||| | |||||| || ||||| || |||||||| |||||| |
|
|
| T |
9218445 |
gtgcatagcaagactaatggtctcttctggcctgttaaaagaaagaggtttggcacctgttagaagctctgcaagaactactccaaagctatacacatca |
9218544 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
||||| || |||| ||| |||||||||||||| ||||||||||| || ||||||||||||||||||| || |||||| || || ||||||||||||| |
|
|
| T |
9218545 |
cttttttcggttaattgatgtgtttgcatatactctggatctaagtatccaagagttccttgtaccattgtcgctatctcggtttgatcaagtggaacca |
9218644 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
|||||||||| || || || || ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||| |
|
|
| T |
9218645 |
atcttgaagctccgaagtcggaaacttttgcagtgtaattgtcatccaagagaatgttggtactcttaacatctctatggataattggaattgatgcagc |
9218744 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
||||||||||||||||||||| || ||| | || ||||||||||||||||| ||||||||| || ||| ||||| || || ||| | | || || ||| |
|
|
| T |
9218745 |
tgaatgtagatatgataaagcaccagctgtctctgctgctatccttaaacgtgttttccatgctggattgtttgctttatctttacaattttgtatgaaa |
9218844 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|| ||||| || || ||||||| ||||||||| || | ||||||||| ||||||||||||||| || || ||||||||||| || ||||||||||||| |
|
|
| T |
9218845 |
tcaaaaagtgttccgttgctaacaaattcatacaccaacgaaggaacttctgtctccaaacaacaccctaaaagtttgacaacgttcctatgatttattt |
9218944 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| | || | || || |||||||||||||| |||| || ||||| |||| || | | |||||| |
|
|
| T |
9218945 |
gggacagaacaactacctcattaatgaattgctcgatctgatttgcgtctattattttggactttttgacagcgacaattttgttatcgggcaaaattcc |
9219044 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagcagtt |
816 |
Q |
| |
|
|||| |||| ||||| ||||||||||| || || ||||| || || || ||||| ||||| |||||||||||||| ||||| |||| |||||||| | | |
|
|
| T |
9219045 |
tttgaaaactgtaccaaaacctcctctaccgatgattaagctttcgtcgtagtttttggtggctttcttaagttcctcttccgtgaatatttgagctgat |
9219144 |
T |
|
| Q |
817 |
cctgatgcg-cttctcttttagaaagttggcgtagcaaaatgaaaccgccattttgtttaaagaatttctcttttagtttcaagagttttcttctttg |
913 |
Q |
| |
|
|| | | |||||||| | || ||||| |||||||||| |||| |||||||||| ||||||||| | |||||||| | |||||| ||| |||| |
|
|
| T |
9219145 |
tgcgaagtgtcttctcttgttgatagttgttgtagcaaaatagaaccaccattttgttgaaagaatttttgctttagtttgatgagtttccttttttg |
9219242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 17 - 809
Target Start/End: Original strand, 9199829 - 9200621
Alignment:
| Q |
17 |
caagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaagaacttcagacacatgattctctcttaaacaagataagaa |
116 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||| ||||||| |||||| |||||||||| | | ||| | | | || | | |||||||||| || || |
|
|
| T |
9199829 |
caagaatagcaacctccttaatctctttcttgttttcatcatccaaaattccaacttgaatagcatcaaaaagtttatcttgttttaaacaagacaaaaa |
9199928 |
T |
|
| Q |
117 |
gtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatca |
216 |
Q |
| |
|
||| || ||||| || || | |||||| | || |||||||||| |||||| || || ||||| | |||||| || || || || ||||||||||||||| |
|
|
| T |
9199929 |
gtgcatagcaagactaatggtttcttcttgcctgttaaaagaaagaggtttgtcacctgttagaagctctgcaagaaccactccaaagctataaacatca |
9200028 |
T |
|
| Q |
217 |
cttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaacca |
316 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| || |||||||| || ||||| |||||||| |||| || |||||| || || ||||||||||||| |
|
|
| T |
9200029 |
cttttctcggttagttgatgtgtttgcatatactcgggatctaagtatccaagtgttccttgcaccattgttgctatctctgtttgatcaagtggaacca |
9200128 |
T |
|
| Q |
317 |
atcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcaga |
416 |
Q |
| |
|
|||| ||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || |||||||| ||||||||||| | ||||||| |
|
|
| T |
9200129 |
atctggaagctccaaagtcagaaacttttgcggtgtaattgtcatccaagagaatgttggtactcttaacatctctgtggataattggaattgatgcagc |
9200228 |
T |
|
| Q |
417 |
tgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaa |
516 |
Q |
| |
|
|||||||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||| ||| |||||||| || || || | | || || ||| |
|
|
| T |
9200229 |
tgaatgtagatatgataaagctccagctgtctccgctgctatccttaaacgtgttttccatgttggattatttgttttatctttagtgctttgtatgaaa |
9200328 |
T |
|
| Q |
517 |
tcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttattt |
616 |
Q |
| |
|
|||||||| ||||| ||||||| |||||| || |||| | ||||||||| |||||| | |||||| || | ||||||||||||||| ||||||||||||| |
|
|
| T |
9200329 |
tcgaaaagtgtaccgttgctaacaaattcgtacactaatgaaggaacttctgtctctagacaacagcctaggagtttgacaacattcctatgatttattt |
9200428 |
T |
|
| Q |
617 |
gggacagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcc |
716 |
Q |
| |
|
||| ||||||||| |||||||| ||||||||||| | ||| | || || ||||||||||| || || | || ||||| |||| || | || || ||| |
|
|
| T |
9200429 |
gggtcagaacaactacctcattaatgaattgctcaatttgatttgcgtcaattattttggatttttttacagcgacaattttgttatcaggtaaaactcc |
9200528 |
T |
|
| Q |
717 |
tttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttg |
809 |
Q |
| |
|
||||||||| ||||| ||||||||||| || || ||||| || || || || || ||||| |||||||||||||| |||||| |||| ||||| |
|
|
| T |
9200529 |
tttgtaaactgtaccaaaacctcctctaccgatgattaagctttcgtcgtattttttggtggctttcttaagttcctcttctgtgaatatttg |
9200621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 153 - 761
Target Start/End: Complemental strand, 1868892 - 1868284
Alignment:
| Q |
153 |
aaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatcacttttctctgttagttggtgtgtttgcatatattct |
252 |
Q |
| |
|
|||| ||| ||||||||||||||| || | |||| | || ||||| || |||||||| ||||||||||| || |||| ||| |||||||||||| ||| |
|
|
| T |
1868892 |
aaaacaaaaaggtttctcccccgtcagcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactct |
1868793 |
T |
|
| Q |
253 |
ggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaaccaatcttgaagcaccaaaatcagacacttttgcagtgt |
352 |
Q |
| |
|
|||||||| ||||||| ||||||||| |||| |||||||| ||| || ||||||||||||||||||||||| |||||||| || ||||| || |||| |
|
|
| T |
1868792 |
ggatctaagtagccaatagttccttgcaccattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgatactttggcggtgt |
1868693 |
T |
|
| Q |
353 |
aattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcagatgaatgtagatatgataaagctcctgctatttccgc |
452 |
Q |
| |
|
| ||| ||||||||||| |||| ||||||||||||||||| || |||| || ||| |||||||||||||||| |||||| | |||| || || |
|
|
| T |
1868692 |
tggttctatctaagagaatgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtagatatgacaaagcttcagctacctctgc |
1868593 |
T |
|
| Q |
453 |
tgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaatcgaaaagggtaccattgctaataaattcataaact |
552 |
Q |
| |
|
|||||| | | ||| ||||||||| || ||||||| |||| | | | ||||| || ||| | ||||||| |||||| ||| |||||||||||| |
|
|
| T |
1868592 |
ggctatcttaagacgagttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaacc |
1868493 |
T |
|
| Q |
553 |
agtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaacaaccacctcatttatgaattgctcta |
652 |
Q |
| |
|
| |||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| || | |
|
|
| T |
1868492 |
aacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgagagagaacaaccacctcattaatgaattgatcga |
1868393 |
T |
|
| Q |
653 |
cttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcctttgtaaaccgtaccgaaacctcctctgccaattat |
752 |
Q |
| |
|
|||| | ||| |||||||| || || ||||| ||||| || || || || |||||| ||||||| |||| ||||| ||||| ||| ||||||| || |
|
|
| T |
1868392 |
tttggcttctatctattatttttgattttttgatagcaacgattcttttatcatctagaagtcctttgaaaacggtaccaaaaccacctttgccaatgat |
1868293 |
T |
|
| Q |
753 |
taaactctc |
761 |
Q |
| |
|
|||| |||| |
|
|
| T |
1868292 |
taaattctc |
1868284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 121 - 761
Target Start/End: Complemental strand, 1843315 - 1842675
Alignment:
| Q |
121 |
attgcaaggcttctgttctcttctggtctattaaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatcacttt |
220 |
Q |
| |
|
|||||||| ||||| ||||||| || ||| |||| ||| |||||||||||||||||| | |||| | || ||||| || |||||||| |||||||||| |
|
|
| T |
1843315 |
attgcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttagcaactctacaagaactactccaaagctatagacatcacttt |
1843216 |
T |
|
| Q |
221 |
tctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaaccaatct |
320 |
Q |
| |
|
| || |||| ||| |||||||||||| ||||||||||| ||||||| ||||||||| |||| |||||||| ||| || |||| |||||||||||| |
|
|
| T |
1843215 |
tttcagttaattgacttgtttgcatatactctggatctaagtagccaatagttccttgcaccattgtggctatttcagtttgatcaattggaaccaatct |
1843116 |
T |
|
| Q |
321 |
tgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcagatgaa |
420 |
Q |
| |
|
|||||| |||||||| || ||||| || |||| | ||| ||||||||||| |||| ||||||||||||||||| ||||||| || ||| ||||| |
|
|
| T |
1843115 |
tgaagctccaaaatctgatactttggctgtgttggttctatctaagagaatgttatcactcttgacatctctatggattattggtattgaggcatatgaa |
1843016 |
T |
|
| Q |
421 |
tgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaatcga |
520 |
Q |
| |
|
||||||||||| |||| | | |||| || || |||||| | | ||| ||||||||| || ||||||| |||| | | | ||||| || ||| | |
|
|
| T |
1843015 |
tgtagatatgacaaagtttcagctacctctgcggctatcttaagacgagttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccag |
1842916 |
T |
|
| Q |
521 |
aaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttggga |
620 |
Q |
| |
|
||||||| |||||| ||| |||||||||||| | |||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||| || |
|
|
| T |
1842915 |
aaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgaga |
1842816 |
T |
|
| Q |
621 |
cagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcctttg |
720 |
Q |
| |
|
|||| || |||||||| |||||||| | | |||| | ||| |||||||| || || ||||| ||||| || || || || |||||| ||||||| |
|
|
| T |
1842815 |
gagaataattacctcattaatgaattgattgatttggcttctatctattatttttgattttttgatagcaacgattcttttatcatctagaaatcctttg |
1842716 |
T |
|
| Q |
721 |
taaaccgtaccgaaacctcctctgccaattattaaactctc |
761 |
Q |
| |
|
||||| ||||| ||||| ||| ||||||| |||||| |||| |
|
|
| T |
1842715 |
taaacagtaccaaaaccacctttgccaatgattaaattctc |
1842675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 153 - 811
Target Start/End: Complemental strand, 1857294 - 1856639
Alignment:
| Q |
153 |
aaaagaaataggtttctcccccgttaggatctctgccagcactaccccgaagctataaacatcacttttctctgttagttggtgtgtttgcatatattct |
252 |
Q |
| |
|
|||| ||| ||||||||||||||| || | ||| | || ||||| || |||||||| ||||||||||| || |||| ||| |||||||||||| ||| |
|
|
| T |
1857294 |
aaaacaaaaaggtttctcccccgtcagcaactccacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactct |
1857195 |
T |
|
| Q |
253 |
ggatctaaatagccaagagttccttgtaccacagtggctatcgtagtatggtcaagtggaaccaatcttgaagcaccaaaatcagacacttttgcagtgt |
352 |
Q |
| |
|
|||||||| ||||||| ||||||||| |||| |||||||| ||| || ||||||||||||||||||||||| |||||||| |||||||| || |||| |
|
|
| T |
1857194 |
ggatctaagtagccaatagttccttgcaccattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgt |
1857095 |
T |
|
| Q |
353 |
aattgtcatccaagagaatgttggcacttttgacatctctatggataattggtaaggatgcagatgaatgtagatatgataaagctcctgctatttccgc |
452 |
Q |
| |
|
| |||| ||||||||||| |||| ||||||||||||||||| || ||| || ||| |||||||||||||||| | ||| | |||| || || |
|
|
| T |
1857094 |
tggttccatctaagagaatgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatatgacagagcctcagctacctctgc |
1856995 |
T |
|
| Q |
453 |
tgctatccttaaacgcgttttccatattgcattatttgccttctcaatactagtgtgcatcaaatcgaaaagggtaccattgctaataaattcataaact |
552 |
Q |
| |
|
|||||| | | ||| || ||||| ||| || ||| | ||| | | ||||| || || || |||| ||||||||||||| ||| |||||||| |
|
|
| T |
1856994 |
ggctatcttaagacgagtcttccaagttggatcatt---cgtcttaccttttgtgtgaataaattcagaaagagtaccattgctaacaaactcataaacc |
1856898 |
T |
|
| Q |
553 |
agtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaacaaccacctcatttatgaattgctcta |
652 |
Q |
| |
|
| |||||||||| ||| || | |||||| || ||||||||||| |||||||| ||||||||||| || | |||| |||||||||| |||||||| || | |
|
|
| T |
1856897 |
aacaaaggaacttctgtttctagacaacaccctaagagtttgaccacatttctgtgatttatttgagagacaacatccacctcattaatgaattgttcaa |
1856798 |
T |
|
| Q |
653 |
cttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcctttgtaaaccgtaccgaaacctcctctgccaattat |
752 |
Q |
| |
|
|||| | || ||| |||| ||||| ||||| |||||||| || || || | || ||||||||||| ||||| ||||||||| | || || || |
|
|
| T |
1856797 |
tttggcttttgtctattgttttagactttttgatagcaacaattctattatcatcaagttcccctttgtaaactgtaccaaaacctcctttacctatgat |
1856698 |
T |
|
| Q |
753 |
taaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgag |
811 |
Q |
| |
|
||| ||||| ||| | ||||| || |||||| | ||||||| ||||| |||||| |||| |
|
|
| T |
1856697 |
taagctctcatcaaatttgttagtggctttccttagttcattttcttcgaaaatgtgag |
1856639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 66 - 445
Target Start/End: Original strand, 1815663 - 1816042
Alignment:
| Q |
66 |
accaacttgaagaacttcagacacatgattctctcttaaacaagataagaagtgaattgcaaggcttctgttctcttctggtctattaaaagaaataggt |
165 |
Q |
| |
|
|||| |||||| ||||||| |||||| || || | | || |||||||| ||||| | ||||| ||||| ||||||| || ||| |||| ||| |||| |
|
|
| T |
1815663 |
accatcttgaataacttcaaacacattatcctttttcaagcaagataaaaagtgcgtagcaagacttcttctctcttccggcctaccaaaacaaaaaggt |
1815762 |
T |
|
| Q |
166 |
ttctcccccgttaggatctctgccagcactaccccgaagctataaacatcacttttctctgttagttggtgtgtttgcatatattctggatctaaatagc |
265 |
Q |
| |
|
|||||||||||||| | ||| | || ||||| || |||||||| |||||||||||||| |||| |||| |||||||||||| |||||||| || |||| |
|
|
| T |
1815763 |
ttctcccccgttagcagctccacaagaactactccaaagctatatacatcacttttctcagttaattggcttgtttgcatatactctggatccaagtagc |
1815862 |
T |
|
| Q |
266 |
caagagttccttgtaccacagtggctatcgtagtatggtcaagtggaaccaatcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaa |
365 |
Q |
| |
|
||| ||||||||| |||| ||||||| ||| || |||||||||| ||| ||||| || |||||||| |||||||| || |||| | |||| || |
|
|
| T |
1815863 |
caatagttccttgcaccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttagcggtgttggttccatctaa |
1815962 |
T |
|
| Q |
366 |
gagaatgttggcacttttgacatctctatggataattggtaaggatgcagatgaatgtagatatgataaagctcctgcta |
445 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||| |||| || |||| |||||| |||||||| | |||||| |||| |
|
|
| T |
1815963 |
gagaatgttagcactcttgacatctctatggataatgggtattgaggcagctgaatgcagatatgacagagctccagcta |
1816042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 521 - 812
Target Start/End: Original strand, 1816115 - 1816406
Alignment:
| Q |
521 |
aaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttggga |
620 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||| | |||||||||| ||| || | |||||| |||||||||||||| ||||| || ||||||||||| || |
|
|
| T |
1816115 |
aaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgtttctagacaacaccccaagagtttgaccacattcctgtgatttatttgaga |
1816214 |
T |
|
| Q |
621 |
cagaacaaccacctcatttatgaattgctctacttgggtggcatccattattttggacttcttgattgcaacaatcctgttgtctgctagaattcctttg |
720 |
Q |
| |
|
| |||| ||||||| || |||||||| || | |||| | | || ||| |||||||||| ||||| || ||||| || || || | || |||||| |
|
|
| T |
1816215 |
gacaacatccacctcgttaatgaattgttcaatttggctttcgtctattgttttggactttttgatagccacaattctattatcatcaagttcccctttg |
1816314 |
T |
|
| Q |
721 |
taaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagc |
812 |
Q |
| |
|
|||| ||||| ||||||||||| || || ||||| ||||| ||| ||||||| ||||||||| | ||||||| |||||||||||| ||||| |
|
|
| T |
1816315 |
aaaactgtaccaaaacctcctctacctatgattaagctctcatcaaagttgttagtagctttccttagttcattttctttgaaaatgtgagc |
1816406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 714 - 812
Target Start/End: Original strand, 9178941 - 9179039
Alignment:
| Q |
714 |
tcctttgtaaaccgtaccgaaacctcctctgccaattattaaactctcctcatagttgttggtagctttcttaagttcatcttctttgaaaatttgagc |
812 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| ||||| || || || ||||| ||||| |||||||||||||| |||||| |||| |||||||| |
|
|
| T |
9178941 |
tcctttgtaaactgtaccaaaacctcctctgccaatgattaagctttcatcgtagtttttggtggctttcttaagttcctcttctgtgaatatttgagc |
9179039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 541 - 644
Target Start/End: Complemental strand, 40568463 - 40568360
Alignment:
| Q |
541 |
aattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaacaaccacctcattta |
640 |
Q |
| |
|
||||||||||| || || ||||||| |||||| |||||||| |||||||| || || ||||||||||| || |||||||| ||||| ||||| ||||| | |
|
|
| T |
40568463 |
aattcataaacaagcaagggaacttctgtctctaaacaacaacccaagagctttaccacatttctatggttgatttgggaaagaacgaccacttcattga |
40568364 |
T |
|
| Q |
641 |
tgaa |
644 |
Q |
| |
|
|||| |
|
|
| T |
40568363 |
tgaa |
40568360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 526 - 644
Target Start/End: Complemental strand, 40579536 - 40579418
Alignment:
| Q |
526 |
gtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaa |
625 |
Q |
| |
|
||||||||| ||||||||| ||||| ||||| ||||||| |||||| |||||||| ||||| | || || |||||||||||||| |||||||| |||| |
|
|
| T |
40579536 |
gtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaa |
40579437 |
T |
|
| Q |
626 |
caaccacctcatttatgaa |
644 |
Q |
| |
|
||||| ||||| ||||| |
|
|
| T |
40579436 |
tgaccacttcattgatgaa |
40579418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 644
Target Start/End: Complemental strand, 40573079 - 40572961
Alignment:
| Q |
526 |
gtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaa |
625 |
Q |
| |
|
||||||||| |||||||||||| || | ||| ||||||| |||||| |||||||| ||||||| || || ||||||||||| || |||||||| || | |
|
|
| T |
40573079 |
gtaccattgggaataaattcatacacaactaagggaacttctgtctctaaacaacagcccaagatctttaccacatttctatggttgatttgggaaagta |
40572980 |
T |
|
| Q |
626 |
caaccacctcatttatgaa |
644 |
Q |
| |
|
| ||||| ||||| ||||| |
|
|
| T |
40572979 |
cgaccacttcattgatgaa |
40572961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 650
Target Start/End: Complemental strand, 40591369 - 40591260
Alignment:
| Q |
541 |
aattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaacaaccacctcattta |
640 |
Q |
| |
|
||||||||||| || || ||||||| |||||| |||||||| ||||| | | | || ||||||||||| || ||||| || ||||| ||||| ||||| | |
|
|
| T |
40591369 |
aattcataaacaagcaatggaacttctgtctctaaacaacaacccaaaattcttaccacatttctatggttgatttgagaaagaacgaccacttcattga |
40591270 |
T |
|
| Q |
641 |
tgaattgctc |
650 |
Q |
| |
|
||||| |||| |
|
|
| T |
40591269 |
tgaatggctc |
40591260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 526 - 644
Target Start/End: Original strand, 2015258 - 2015376
Alignment:
| Q |
526 |
gtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaa |
625 |
Q |
| |
|
||||||||| ||| ||||| ||||| ||||||||||||| |||||| |||||||| |||||||| || || ||||||||||| || ||||| || || | |
|
|
| T |
2015258 |
gtaccattgggaatgaattcgtaaacaagtaaaggaacttctgtctctaaacaacaacccaagagctttaccacatttctatggttgatttgtgaaagca |
2015357 |
T |
|
| Q |
626 |
caaccacctcatttatgaa |
644 |
Q |
| |
|
||| ||| ||||| ||||| |
|
|
| T |
2015358 |
caatcacttcattgatgaa |
2015376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 31629327 - 31629369
Alignment:
| Q |
193 |
actaccccgaagctataaacatcacttttctctgttagttggt |
235 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
31629327 |
actacgccgaagctataaacatcacttttgtctgtgagttggt |
31629369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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