View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2640_low_22 (Length: 434)
Name: NF2640_low_22
Description: NF2640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2640_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 12 - 420
Target Start/End: Original strand, 19098048 - 19098456
Alignment:
| Q |
12 |
atgaataagggtttaaaacataaaagtgaatcatgctaagcttaaggtaacaaaactatgccatctctctttttaaaatatggccgtagcctatggtgga |
111 |
Q |
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| T |
19098048 |
atgaataagggtttaaaacataaaagtgaatcatgctaagcttaaggtaacaaaactatgccatctctctttttaaaatatggccgtagcctatggtgga |
19098147 |
T |
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| Q |
112 |
gttttgggcgagttagtttacaaaacaatcatgcttagtcaatctatttgttgattgtgtcttcgtcgttgattattttaaatggtatgtttatgtgttt |
211 |
Q |
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| T |
19098148 |
gttttgggcgagttagtttacaaaacaatcatgcttagtcaatctatttgttgattgtgtcttcgtcgttgattattttaaatggtatgtttatgtgttt |
19098247 |
T |
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| Q |
212 |
ttattacaaaagttatgtaatattaactcatcgaaaaatgttaatatgtatttggcttgtgttgttaagacttgaaactgctagatttatcaatttgcta |
311 |
Q |
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| T |
19098248 |
ttattacaaaagttatgtaatattaactcatcgaaaaatgttaatatgtatttggcctgtgttgttaagacttgaaactgctagatttatcaatttgcta |
19098347 |
T |
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| Q |
312 |
aaggttgaaaatgaaaaagaatgcatggctctaagttctaaagaagttgaggcatgcttgtggtatataaggtttcaagtttgaatttattcttgtgatg |
411 |
Q |
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| T |
19098348 |
aaggttgaaaatgaaaaagaatgcatggctctaagttctaaagaagttgaggcatgcttgtggtatataaggtttcaagtttgaatttattcttgtgatg |
19098447 |
T |
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| Q |
412 |
taaatattg |
420 |
Q |
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| T |
19098448 |
taaatattg |
19098456 |
T |
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