View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2641_low_21 (Length: 238)
Name: NF2641_low_21
Description: NF2641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2641_low_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 42591617 - 42591386
Alignment:
| Q |
7 |
tttatattgtgtataaaattattgaaggtgcaactaaatattataaaaaagaataatgtttaagtttgacacttattacttatattaaagtgtttaaccc |
106 |
Q |
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| T |
42591617 |
tttatattgtgtataaaattattgaaggtgtaactaaatattataaaaaagaataatgtttaagtttgacacttattacttatattaaagtgtttaaccc |
42591518 |
T |
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| Q |
107 |
acctgggcagcagttattccagctacttcaacatgattacccttttcaaacttttgattgttcatactaacttctttctctcttagtacattcaattctt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42591517 |
acctgggcagcagttattccagctacttcaacatgattacccttttcaagcttttgattgttcatactaacttctttctctcttagtacattcaattctt |
42591418 |
T |
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| Q |
207 |
caacaggccattgtactaattgtctttcagta |
238 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
42591417 |
caacaggccattgtactaattgtctttcagta |
42591386 |
T |
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