View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2642_high_2 (Length: 552)
Name: NF2642_high_2
Description: NF2642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2642_high_2 |
 | |
|
| [»] scaffold0047 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-113; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 303 - 530
Target Start/End: Complemental strand, 7418796 - 7418569
Alignment:
| Q |
303 |
acaccatgtgaatgtagactcaagagtcaagagtcaaggtcaatgtaataaactactttgcaaattctaagtcaataaatcaatattgaaatttctgtga |
402 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7418796 |
acactatgtgaatgtagactcaagagtcaagagtcaaggtcaatggaataaactactttgcaaattctaagtcaataaatcaatattgaaatttctgtga |
7418697 |
T |
|
| Q |
403 |
aattgcaatggcaacaatccaagaaacaaaaggcaatgagtcctttttagtttggcaactcgaaattatttttgaaagatcaaaatatacaggtcaattg |
502 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7418696 |
aattgcaatggcaacaatccaagaaacaataggcagtgagtccattttagtttggcaactcgaaattatttttgaaagatcaaaatatacaggtcaattg |
7418597 |
T |
|
| Q |
503 |
tcttccacttactcttcaattattttag |
530 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
7418596 |
tcttccacttactcttcaattattttag |
7418569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 32965960 - 32965917
Alignment:
| Q |
258 |
agtctcctacggtaggagacctattaagattgtctaccgtagcc |
301 |
Q |
| |
|
||||||||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
32965960 |
agtctcctacggtaggagacctaatgagattgcctaccgtagcc |
32965917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 26034176 - 26034413
Alignment:
| Q |
1 |
gctgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcatt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26034176 |
gctgggaatgtatgcagcttgcagagaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcatt |
26034275 |
T |
|
| Q |
101 |
acaaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatct |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
26034276 |
acaaattcaattgcttttttaaagttcaagattaatgttttaaatatatcatcctagtgggtgggtcatgctgcaaacaaatctatgccattcaaaacct |
26034375 |
T |
|
| Q |
200 |
tctttctaaatctaatggttgacatcgattttgaaatt |
237 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||| |
|
|
| T |
26034376 |
tctttctaaatctaatggctggcatcgattttgaaatt |
26034413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 6090772 - 6090535
Alignment:
| Q |
1 |
gctgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6090772 |
gctgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcatt |
6090673 |
T |
|
| Q |
101 |
acaaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatct |
199 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
6090672 |
acaaattcaattgctttttaaaagttcaagattaatgttttaaatataccatcctagtgggtgggtcatgctgcaaacaaatctatgccattcaaaacct |
6090573 |
T |
|
| Q |
200 |
tctttctaaatctaatggttgacatcgattttgaaatt |
237 |
Q |
| |
|
| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
6090572 |
tttttctaaatctaatggctggcatcgattttgaaatt |
6090535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 13882672 - 13882615
Alignment:
| Q |
160 |
gtgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
|||||||| |||| || |||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
13882672 |
gtgggtcaacctgccaagaaatctgtgccattcaaaatgttctttctaaatccaatgg |
13882615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 14022797 - 14022740
Alignment:
| Q |
160 |
gtgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
|||||||| |||| || |||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
14022797 |
gtgggtcaacctgccaagaaatctgtgccattcaaaatgttctttctaaatccaatgg |
14022740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 181; Significance: 2e-97; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 3 - 314
Target Start/End: Original strand, 31413 - 31726
Alignment:
| Q |
3 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcattac |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31413 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcattac |
31512 |
T |
|
| Q |
103 |
aaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatcttc |
201 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
31513 |
aaattcagttgcttttttaaagttcaagattaatgttttaaatataccatcctaatgggtgggccatgctgcaaacaaatctatgtcattcaaaaccttc |
31612 |
T |
|
| Q |
202 |
tttctaaatctaatggttgacatcgattttgaaatt-nnnnnnnnnnnnnnnnttatagtctcctacggtaggagacctattaagattgtctaccgtagc |
300 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
31613 |
tttctaaatctaatggatggcatcgattttgaaattaaaaaaaaaagtaaaaattgtagtctcctacggtaggagacctattaaggttgcctaccgtagc |
31712 |
T |
|
| Q |
301 |
caacaccatgtgaa |
314 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
31713 |
caacaccatatgaa |
31726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 181; Significance: 2e-97; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 3 - 314
Target Start/End: Complemental strand, 5120 - 4807
Alignment:
| Q |
3 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcattac |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5120 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcattac |
5021 |
T |
|
| Q |
103 |
aaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatcttc |
201 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
5020 |
aaattcagttgcttttttaaagttcaagattaatgttttaaatataccatcctaatgggtgggccatgctgcaaacaaatctatgtcattcaaaaccttc |
4921 |
T |
|
| Q |
202 |
tttctaaatctaatggttgacatcgattttgaaatt-nnnnnnnnnnnnnnnnttatagtctcctacggtaggagacctattaagattgtctaccgtagc |
300 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
4920 |
tttctaaatctaatggatggcatcgattttgaaattaaaaaaaaaagtaaaaattgtagtctcctacggtaggagacctattaaggttgcctaccgtagc |
4821 |
T |
|
| Q |
301 |
caacaccatgtgaa |
314 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
4820 |
caacaccatatgaa |
4807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 181; Significance: 2e-97; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 3 - 314
Target Start/End: Original strand, 14834579 - 14834892
Alignment:
| Q |
3 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcattac |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14834579 |
tgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcattac |
14834678 |
T |
|
| Q |
103 |
aaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatcttc |
201 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
14834679 |
aaattcagttgcttttttaaagttcaagattaatgttttaaatataccatcctaatgggtgggccatgctgcaaacaaatctatgtcattcaaaaccttc |
14834778 |
T |
|
| Q |
202 |
tttctaaatctaatggttgacatcgattttgaaatt-nnnnnnnnnnnnnnnnttatagtctcctacggtaggagacctattaagattgtctaccgtagc |
300 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
14834779 |
tttctaaatctaatggatggcatcgattttgaaattaaaaaaaaaagtaaaaattgtagtctcctacggtaggagacctattaaggttgcctaccgtagc |
14834878 |
T |
|
| Q |
301 |
caacaccatgtgaa |
314 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
14834879 |
caacaccatatgaa |
14834892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 52105974 - 52105762
Alignment:
| Q |
5 |
ggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcattacaa |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
52105974 |
ggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcattacaa |
52105875 |
T |
|
| Q |
105 |
attcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatcttctt |
203 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
52105874 |
attcaattgcttttttaaagttcaaaattaatgttttaaatatatcatcctagtgggtgggtcatgctgcaaacaaatttatgccattcaaaaccttctt |
52105775 |
T |
|
| Q |
204 |
tctaaatctaatg |
216 |
Q |
| |
|
||||||||||||| |
|
|
| T |
52105774 |
tctaaatctaatg |
52105762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 52105720 - 52105669
Alignment:
| Q |
257 |
tagtctcctacggtaggagacctattaagattgtctaccgtagccaacacca |
308 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||| ||||||||| |||||||| |
|
|
| T |
52105720 |
tagtctcctacggtaggagacccattaaagttgcctaccgtagtcaacacca |
52105669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 23568369 - 23568312
Alignment:
| Q |
160 |
gtgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
|||||||| |||| || |||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
23568369 |
gtgggtcaatctgccaagaaatctgtgccattcaaaatgttctttctaaatccaatgg |
23568312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 162; Significance: 3e-86; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 48158456 - 48158694
Alignment:
| Q |
1 |
gctgggaatgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcatt |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
48158456 |
gctgggaatgtatgcagcttgcaggaaacacgcgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaatttatt |
48158555 |
T |
|
| Q |
101 |
acaaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgcca-ttcaaaatc |
198 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| | ||||||| | |
|
|
| T |
48158556 |
acaaattcaattgtttttttaaagttcaagattaatgttttaaatataccatcctagtgggtgggtcatgctgcaaacaaatatatgctatttcaaaacc |
48158655 |
T |
|
| Q |
199 |
ttctttctaaatctaatggttgacatcgattttgaaatt |
237 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
48158656 |
ttctttctaaatctaatggctggcatcgattttgaaatt |
48158694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 52865775 - 52865719
Alignment:
| Q |
161 |
tgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
||||||| |||| || |||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
52865775 |
tgggtcaacctgccaagaaatctatgccattcaaaatgctctttctaaatccaatgg |
52865719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 157; Significance: 3e-83; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 41806975 - 41807213
Alignment:
| Q |
4 |
gggaatgtatgcagcttgcagggaacac----acgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcat |
99 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
41806975 |
gggaatgtatgcagcttgcagggaacacacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcat |
41807074 |
T |
|
| Q |
100 |
tacaaattcaattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatc |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||| ||||||||| | |
|
|
| T |
41807075 |
tacaaattcaattgcttttttaaagttcaagattaatgttttaaatataccatcctagtggatgggtcaagctgcaaacaaatctatgtcattcaaaacc |
41807174 |
T |
|
| Q |
199 |
ttctttctaaatctaatggttgacatcgattttgaaatt |
237 |
Q |
| |
|
|||||||||| |||||||| | ||||||||||| ||||| |
|
|
| T |
41807175 |
ttctttctaattctaatggctcacatcgattttaaaatt |
41807213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 5950183 - 5950126
Alignment:
| Q |
160 |
gtgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
|||||||| ||||||| |||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
5950183 |
gtgggtcaacctgcaaagaaatctgtgccattcaaaatgttctttctaaatccaatgg |
5950126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 41807236 - 41807286
Alignment:
| Q |
257 |
tagtctcctacggtaggagacctattaagattgtctaccgtagccaacacc |
307 |
Q |
| |
|
|||||| ||||| ||||||||| |||||| ||| ||||||||||||||||| |
|
|
| T |
41807236 |
tagtcttctacgataggagacccattaaggttgcctaccgtagccaacacc |
41807286 |
T |
|
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Target: chr5 (Bit Score: 141; Significance: 1e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 9 - 307
Target Start/End: Original strand, 6231623 - 6231922
Alignment:
| Q |
9 |
tgtatgcagcttgcagggaacacacgaggatggtggtggtaacattgtaggatttataagcttcttaatccttcatgacnnnnnnnttcattacaaattc |
108 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
6231623 |
tgtatgcatcttgtagggaacacacgaggatggtgggggtaacattgtaggatttataagcttcttaatccttcatgacaaaaaaattcgttacaaattc |
6231722 |
T |
|
| Q |
109 |
aattgcttttttaaagttcaagattaatgttttaaatata-catcttagtgggtgggtcatgctgcaaacaaatctatgccattcaaaatcttctttcta |
207 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6231723 |
acttgcttttttaaagttcaagattaatgttttaaatatatcatccta----gtgggtcatgctgcaaacaaatctatgccattcaaaagcttctttcta |
6231818 |
T |
|
| Q |
208 |
aatc----taatggttgacatcgattttgaaattnnnnnnnnnnnnnnnnttatagtctcctacggtaggagacctattaagattgtctaccgtagccaa |
303 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| || |||||||||||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
6231819 |
aatctaattaatagttggcatcgattttgaaattaaaataaaaataaaaattgtagtctcctacgataggagacccattaaggttgtctaccgtagccaa |
6231918 |
T |
|
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Target: chr6 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 15517672 - 15517728
Alignment:
| Q |
161 |
tgggtcatgctgcaaacaaatctatgccattcaaaatcttctttctaaatctaatgg |
217 |
Q |
| |
|
||||||| |||| || |||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
15517672 |
tgggtcaacctgccaaaaaatctgtgccattcaaaatgttctttctaaatccaatgg |
15517728 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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