View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2642_low_10 (Length: 262)
Name: NF2642_low_10
Description: NF2642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2642_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 42080713 - 42080937
Alignment:
| Q |
32 |
gcttgttttggtcttcgaatttccgtgcctcggtttcatcaaaacccttccagtttcacaaattgaataacgataaacaattttggttcctaaattactt |
131 |
Q |
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| T |
42080713 |
gcttgttttggtcttcgaatttccgtgcctcggtttcatcaaaacccttccagtttcacaaattgaataactataaacaattttggttcctaaattactt |
42080812 |
T |
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| Q |
132 |
tgccgttcttcgaatcgatagaattcgtttcagcgaaatcgtgtattagataacgcgattctcaatggaatcagatttcgagacgaacgatatgctcaca |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42080813 |
tgccgttcttcgaatcgatagaattcgtttcagcgaaatcgtgtattagataacgcgattctcaatggaatcagatttcgagacgaacgatatgctcaca |
42080912 |
T |
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| Q |
232 |
ctctcacaggattcatttgatgatg |
256 |
Q |
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|||||||| |||||||||||||||| |
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| T |
42080913 |
ctctcacaagattcatttgatgatg |
42080937 |
T |
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