View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2643-Insertion-4 (Length: 163)
Name: NF2643-Insertion-4
Description: NF2643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2643-Insertion-4 |
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Alignment Details
Target: chr4 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 32181505 - 32181657
Alignment:
| Q |
7 |
agaaattcctatattagttagttaacaaagagaaaattacataatttgggatcaccaacacaatattatttnnnnnnnaaatattgggaggctaggtgat |
106 |
Q |
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| T |
32181505 |
agaaattcctatattagttagttaacaaagagaaaattacataatttgggatcaccaacacaattttatttgggagggaaatattgggaggctaggtgat |
32181604 |
T |
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| Q |
107 |
gcatgtttttggtggtggcagatccttctatataggttcctaaacaatagagt |
159 |
Q |
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| T |
32181605 |
gtatttttttggtggtggcagatccttctatataggttcctaaacaatggagt |
32181657 |
T |
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Target: chr2 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 32920063 - 32920106
Alignment:
| Q |
11 |
attcctatattagttagttaacaaagagaaaattacataatttg |
54 |
Q |
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| T |
32920063 |
attccaataatagttagttaacaaagagaaaattacataatttg |
32920106 |
T |
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