View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2643R-Insertion-14 (Length: 154)
Name: NF2643R-Insertion-14
Description: NF2643R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2643R-Insertion-14 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 3e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 3e-77
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 43206002 - 43206147
Alignment:
| Q |
9 |
cttccttcaccttcaacaaaaacaaaaccctatttccattctcaactaccaatatctcacttccatcaaaaccctaacgcctcatatcacatgtcttgca |
108 |
Q |
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| T |
43206002 |
cttccttcaccttcaacaaaaacaaaaccctatttccattctcaactaccaatatctcacttccatcaaaaccctaacgcctcatatcacatgtcttgca |
43206101 |
T |
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| Q |
109 |
gtccaccgtaaccttctatacgctgcatctctcaacctcatcaacg |
154 |
Q |
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| T |
43206102 |
gtccaccgtaaccttctatacgctgcatctctcaacctcatcaacg |
43206147 |
T |
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