View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2643R-Insertion-8 (Length: 214)
Name: NF2643R-Insertion-8
Description: NF2643R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2643R-Insertion-8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 52947311 - 52947106
Alignment:
| Q |
9 |
tctattgcatataattagtcaaaatttaaagtgagattaatcgttgataaaattggcaagcatccgcaccaatgacatagttacccaaaaaataattttg |
108 |
Q |
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| T |
52947311 |
tctattgcatataattagtcaaaatttaaagtgagattaatcgttgataaaattggcaagcatccgcaccaatgacatagatacccaaaaaataattttg |
52947212 |
T |
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| Q |
109 |
actatcattgctcaactgatttcatttccaaaaaagggcttttaaaaccccacttgtcaaattgacaagtactgcttaattataatcaattgtcaacccc |
208 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
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| T |
52947211 |
actatcattactcaactgatttcatttccaaaaaagggcttttaaaaccccacttgtcaaattgacaagtactgttaaattataatcaattgtcaacccc |
52947112 |
T |
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| Q |
209 |
cacttg |
214 |
Q |
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|||||| |
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| T |
52947111 |
cacttg |
52947106 |
T |
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