View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2648_low_8 (Length: 341)
Name: NF2648_low_8
Description: NF2648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2648_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 24 - 323
Target Start/End: Complemental strand, 5257487 - 5257188
Alignment:
| Q |
24 |
gaatgctgaattattggccatattcagcggtagatgctattcgtagatatggtttctatagttaacttgggcaacaggttacacgtatgttatttagtgg |
123 |
Q |
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| T |
5257487 |
gaatgctgaattattggccatattcagcggtagatgctattcgtagatatggtttctatagttaacttgggcaacaggttacacgtatgttatttagtgg |
5257388 |
T |
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| Q |
124 |
ttccttaatggcagttgatatagttactataggagtagttccaactcacatgtgtgctccaacagtagatgctatttatagattccttggttacaattgg |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5257387 |
ttccttaatggcagttgatatagttactataggagtagttccaactcacatgtgtgctccaacagtagatgctatttatagattccttggttacaattgg |
5257288 |
T |
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| Q |
224 |
taattgtccttcttacacaccttgaggaaaggaaataagtgtacatattctcttgcttataagggagcttctcaagaatctcatttggttcatttagtta |
323 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5257287 |
caattgtccttcttacacaccttgaggaaaggaaataagtgtacatattctcttgcttataagggagcttctcaagaatctcatttggttcatttagtta |
5257188 |
T |
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