View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2649_low_18 (Length: 254)

Name: NF2649_low_18
Description: NF2649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2649_low_18
NF2649_low_18
[»] chr4 (26 HSPs)
chr4 (116-194)||(49077304-49077382)
chr4 (152-194)||(722248-722290)
chr4 (152-194)||(754627-754669)
chr4 (152-200)||(5044581-5044629)
chr4 (152-194)||(8109047-8109089)
chr4 (152-194)||(24938462-24938504)
chr4 (152-194)||(43771217-43771259)
chr4 (129-194)||(24834646-24834711)
chr4 (152-203)||(31250921-31250972)
chr4 (163-198)||(40991632-40991667)
chr4 (152-194)||(39471248-39471290)
chr4 (152-194)||(50164486-50164528)
chr4 (157-200)||(48796372-48796415)
chr4 (152-194)||(20454629-20454671)
chr4 (152-194)||(26361355-26361397)
chr4 (152-198)||(34129443-34129489)
chr4 (156-198)||(37451056-37451098)
chr4 (152-194)||(47009280-47009322)
chr4 (152-198)||(48339383-48339429)
chr4 (126-200)||(49242235-49242309)
chr4 (129-194)||(33653536-33653601)
chr4 (152-193)||(46287532-46287573)
chr4 (149-194)||(50481592-50481637)
chr4 (162-194)||(20225388-20225420)
chr4 (155-203)||(38636431-38636479)
chr4 (152-196)||(49682836-49682880)
[»] chr1 (14 HSPs)
chr1 (129-200)||(33193118-33193189)
chr1 (116-239)||(29673530-29673645)
chr1 (152-194)||(32211831-32211873)
chr1 (129-194)||(41958151-41958216)
chr1 (152-192)||(49730955-49730995)
chr1 (129-196)||(33114039-33114106)
chr1 (152-198)||(3872677-3872723)
chr1 (152-194)||(10659815-10659857)
chr1 (152-190)||(11987717-11987755)
chr1 (156-198)||(12767371-12767413)
chr1 (129-198)||(931442-931511)
chr1 (152-194)||(30678958-30679000)
chr1 (198-239)||(29673703-29673744)
chr1 (152-196)||(44272009-44272053)
[»] chr7 (19 HSPs)
chr7 (152-198)||(6442256-6442302)
chr7 (152-194)||(27888373-27888415)
chr7 (152-194)||(25686882-25686924)
chr7 (153-194)||(12263483-12263524)
chr7 (152-200)||(46517382-46517430)
chr7 (152-195)||(22190030-22190073)
chr7 (152-194)||(31502511-31502553)
chr7 (152-194)||(36845569-36845611)
chr7 (152-198)||(44350845-44350891)
chr7 (165-198)||(33008208-33008241)
chr7 (139-198)||(3855853-3855912)
chr7 (163-198)||(19422877-19422912)
chr7 (152-187)||(27320465-27320500)
chr7 (152-194)||(11824162-11824204)
chr7 (152-194)||(27949364-27949406)
chr7 (152-194)||(32212917-32212958)
chr7 (152-194)||(39254174-39254216)
chr7 (175-203)||(17813819-17813847)
chr7 (166-194)||(36845538-36845566)
[»] chr3 (26 HSPs)
chr3 (152-198)||(10948603-10948649)
chr3 (147-196)||(24429070-24429119)
chr3 (152-202)||(19345039-19345089)
chr3 (152-194)||(28529342-28529384)
chr3 (152-194)||(50156707-50156749)
chr3 (152-194)||(52124003-52124045)
chr3 (129-194)||(18427197-18427262)
chr3 (152-194)||(20493492-20493534)
chr3 (152-194)||(29588780-29588822)
chr3 (152-194)||(41451942-41451984)
chr3 (152-196)||(44844072-44844117)
chr3 (156-200)||(742051-742095)
chr3 (156-200)||(752487-752531)
chr3 (126-194)||(8825026-8825094)
chr3 (152-192)||(26310495-26310535)
chr3 (156-196)||(37285378-37285418)
chr3 (162-194)||(46450167-46450199)
chr3 (150-196)||(2009083-2009129)
chr3 (152-194)||(24734796-24734838)
chr3 (152-194)||(29755591-29755633)
chr3 (152-190)||(37776754-37776792)
chr3 (152-190)||(41707490-41707528)
chr3 (156-194)||(49072100-49072138)
chr3 (165-194)||(2419511-2419540)
chr3 (129-194)||(38414715-38414780)
chr3 (116-188)||(22604615-22604687)
[»] chr2 (22 HSPs)
chr2 (116-194)||(35316448-35316526)
chr2 (152-194)||(9470172-9470214)
chr2 (154-200)||(14489580-14489626)
chr2 (152-194)||(38464254-38464296)
chr2 (129-198)||(26767804-26767873)
chr2 (152-194)||(7919317-7919359)
chr2 (156-196)||(25238322-25238362)
chr2 (156-196)||(30718372-30718412)
chr2 (154-194)||(45554652-45554692)
chr2 (163-194)||(12989293-12989324)
chr2 (153-196)||(17188157-17188200)
chr2 (156-194)||(4552887-4552925)
chr2 (152-194)||(15884520-15884562)
chr2 (116-194)||(18511256-18511334)
chr2 (152-194)||(19639184-19639226)
chr2 (152-194)||(19837777-19837819)
chr2 (152-198)||(36471881-36471927)
chr2 (152-194)||(44274325-44274367)
chr2 (165-194)||(10981622-10981651)
chr2 (152-193)||(16719478-16719519)
chr2 (152-196)||(32701561-32701605)
chr2 (156-196)||(45270601-45270641)
[»] chr6 (14 HSPs)
chr6 (129-198)||(10133201-10133270)
chr6 (126-239)||(32122860-32122965)
chr6 (152-194)||(16852020-16852062)
chr6 (152-194)||(34905427-34905469)
chr6 (155-239)||(2675989-2676065)
chr6 (152-194)||(12780806-12780848)
chr6 (152-200)||(12784980-12785028)
chr6 (155-195)||(17144717-17144757)
chr6 (152-194)||(1392719-1392760)
chr6 (152-194)||(16187479-16187521)
chr6 (152-194)||(16187697-16187739)
chr6 (153-194)||(5106390-5106431)
chr6 (152-200)||(445909-445957)
chr6 (140-196)||(899972-900028)
[»] chr8 (18 HSPs)
chr8 (152-198)||(1977216-1977262)
chr8 (152-194)||(8903943-8903985)
chr8 (126-194)||(17499280-17499348)
chr8 (152-200)||(28413910-28413958)
chr8 (152-200)||(32072188-32072236)
chr8 (153-200)||(35819224-35819271)
chr8 (152-194)||(8914862-8914904)
chr8 (152-194)||(9952804-9952846)
chr8 (152-194)||(16983485-16983527)
chr8 (152-194)||(24055972-24056014)
chr8 (129-194)||(35151776-35151841)
chr8 (156-194)||(7493389-7493427)
chr8 (129-195)||(17741573-17741639)
chr8 (152-194)||(35797486-35797528)
chr8 (155-196)||(4675000-4675041)
chr8 (126-187)||(17716916-17716977)
chr8 (152-196)||(9193473-9193517)
chr8 (152-196)||(11962727-11962770)
[»] chr5 (17 HSPs)
chr5 (152-196)||(36337935-36337979)
chr5 (153-196)||(25919303-25919346)
chr5 (129-191)||(14553580-14553642)
chr5 (156-198)||(17434892-17434934)
chr5 (152-194)||(28434865-28434907)
chr5 (152-194)||(28490769-28490811)
chr5 (156-198)||(28611821-28611863)
chr5 (152-194)||(34368451-34368493)
chr5 (152-194)||(41330440-41330482)
chr5 (153-198)||(28223819-28223864)
chr5 (152-196)||(5413782-5413826)
chr5 (152-192)||(25630898-25630938)
chr5 (156-200)||(25710513-25710557)
chr5 (152-195)||(31885877-31885920)
chr5 (152-198)||(28090272-28090318)
chr5 (155-196)||(4427336-4427377)
chr5 (162-194)||(43405494-43405526)
[»] scaffold0018 (1 HSPs)
scaffold0018 (162-194)||(27913-27945)
[»] scaffold0204 (1 HSPs)
scaffold0204 (152-198)||(26905-26951)
[»] scaffold0194 (1 HSPs)
scaffold0194 (163-200)||(8452-8489)


Alignment Details
Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 49077304 - 49077382
Alignment:
Q  116 gataaaatttatatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||| || |||  | || |||||||||||||||||||||||||||||||||||||||||||    
T  49077304 gataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataa 49077382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 722248 - 722290
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  722248 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 722290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 754669 - 754627
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  754669 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 754627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 5044629 - 5044581
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  5044629 ttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaat 5044581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 8109047 - 8109089
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  8109047 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 8109089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 24938504 - 24938462
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24938504 ttcaatttttaaagtgtagacctacaatgatttaaaccaataa 24938462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 43771217 - 43771259
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  43771217 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 43771259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 24834646 - 24834711
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | || ||||||||| |||||||||||||||||| ||||||||||||||    
T  24834646 tatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataa 24834711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 31250972 - 31250921
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaataaa 203  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||| ||||    
T  31250972 ttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaa 31250921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 40991667 - 40991632
Alignment:
Q  163 aagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||||||||||||||||||||||||||||||    
T  40991667 aagtgtagacccacaatgatttaaaccaataaaaga 40991632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 39471248 - 39471290
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  39471248 ttcaatcttcaaagtgtagacccacaatgatttaaaccaataa 39471290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 50164486 - 50164528
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  50164486 ttcaattttcaaagtgtagactcacaatgatttaaaccaataa 50164528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 48796372 - 48796415
Alignment:
Q  157 tttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||| |||||||||| || ||||||||||||||||||||||||    
T  48796372 ttttttaagtgtagactcaaaatgatttaaaccaataaaagaat 48796415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 20454629 - 20454671
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||    
T  20454629 ttcaattttcaaagtgtagatccacaatgatttaaatcaataa 20454671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 26361397 - 26361355
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||| || |||||||||||||| ||||||||||||||||||    
T  26361397 ttcaatattcaaagtgtagacccataatgatttaaaccaataa 26361355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 34129489 - 34129443
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  34129489 ttcaattttcaaagtgtggactcacaatggtttaaaccaataaaaga 34129443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 37451098 - 37451056
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  37451098 attttcaaagtgtagactcgcaatgatttaaaccaataaaaga 37451056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 47009280 - 47009322
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||  |||||||||||||||||||||    
T  47009280 ttcaattttcaaagtgtagatacacaatgatttaaaccaataa 47009322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 48339429 - 48339383
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| |||| ||||||||| |||| |||||||||||||||||    
T  48339429 ttcaattttcaaagcgtagacccataatgctttaaaccaataaaaga 48339383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 49242235 - 49242309
Alignment:
Q  126 atatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||||||||||| || |||  | || ||||||||| || |||||||  ||||||||||||||||||||| |||||    
T  49242235 atatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaat 49242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 33653601 - 33653536
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | |||||||||||| ||| | | || ||||||||||||||||||||||    
T  33653601 tatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataa 33653536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 46287532 - 46287573
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaata 193  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||    
T  46287532 ttcaattttcaaagtgttgactcacaatgatttaaaccaata 46287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 50481637 - 50481592
Alignment:
Q  149 ggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||| ||||| ||||||||||| |||||| ||||||||||||||    
T  50481637 ggtttctattttcaaagtgtagacacacaatcatttaaaccaataa 50481592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 20225420 - 20225388
Alignment:
Q  162 aaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||| |||||||||||||||||||||    
T  20225420 aaagtgtagactcacaatgatttaaaccaataa 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 38636431 - 38636479
Alignment:
Q  155 aatttttaaagtgtagacccacaatgatttaaaccaataaaagaataaa 203  Q
    ||||||||||||||||| ||||||||||||| | |||||| | ||||||    
T  38636431 aatttttaaagtgtagatccacaatgatttatatcaataagaaaataaa 38636479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 49682880 - 49682836
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||| |||||||||| |||||  |||||||||||||||||    
T  49682880 ttcaattttcaaagtgtagagccacatcgatttaaaccaataaaa 49682836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 33193118 - 33193189
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||| ||| ||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  33193118 tatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaat 33193189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 29673530 - 29673645
Alignment:
Q  116 gataaaatttatatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaataaaagattgaatatt 215  Q
    ||||||||  |||||||||||| ||||||  |  ||||||||||| |||||||||| | ||||| ||||||||||||||      |||||  ||| ||||    
T  29673530 gataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataa------aaaag--tgagtatt 29673621  T
Q  216 agagagagtgttgctagcattact 239  Q
    ||||||||||||||||||||||||    
T  29673622 agagagagtgttgctagcattact 29673645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 32211873 - 32211831
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  32211873 ttcaatttttaaggtgtagacccacaatgatttaaaccaataa 32211831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 41958151 - 41958216
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | || ||||||||| |||||||||||||||| ||||||||||||||||    
T  41958151 tatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataa 41958216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 49730955 - 49730995
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaat 192  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  49730955 ttcaattttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 33114039 - 33114106
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||| ||||||| |  | ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  33114039 tatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaa 33114106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 3872723 - 3872677
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||    
T  3872723 ttcaatttccaaagtgtagacccacaatgattcaaaccaataaaaga 3872677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 10659857 - 10659815
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  10659857 ttcaattttcaaagtgtagacccacgatgatttaaaccaataa 10659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 11987717 - 11987755
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaacca 190  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  11987717 ttcaattttcaaagtgtagacccacaatgatttaaacca 11987755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 12767413 - 12767371
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  12767413 atttttaaagtgtagactcataatgatttaaaccaataaaaga 12767371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 931442 - 931511
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||||||  | || ||||||||| ||| | || ||||||||||||||||||||||||||||    
T  931442 tatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaaga 931511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 30679000 - 30678958
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||    
T  30679000 ttcaattttcaaagtgtagactcacaatgatttaagccaataa 30678958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 29673703 - 29673744
Alignment:
Q  198 aataaaagattgaatattagagagagtgttgctagcattact 239  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  29673703 aataaaaaagtgaatattagagagagtgttactagcattact 29673744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 44272009 - 44272053
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||| |||||||||| | ||||||||||||| ||||||||    
T  44272009 ttcaattttcaaagtgtagaacaacaatgatttaaatcaataaaa 44272053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 6442256 - 6442302
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  6442256 ttcaattttcaaagtgtagacccacaatgatttaaaccaataaaaga 6442302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 27888373 - 27888415
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27888373 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 27888415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 25686924 - 25686882
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  25686924 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 25686882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 12263524 - 12263483
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  12263524 tcaattttcaaagtgtagacccacaatgatttaaaccaataa 12263483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 46517382 - 46517430
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  46517382 ttcaattttcaaagtgtagactcacaatgatttaaaccaataagagaat 46517430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 22190030 - 22190073
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaa 195  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  22190030 ttcaattttcaaagtgtagacccgcaatgatttaaaccaataaa 22190073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 31502553 - 31502511
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  31502553 ttcaattttcaaagtgtagactcacaatgatttaaaccaataa 31502511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 36845611 - 36845569
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  36845611 ttcaattttcaaagtatagacccacaatgatttaaaccaataa 36845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 44350891 - 44350845
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  44350891 ttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaaga 44350845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 33008208 - 33008241
Alignment:
Q  165 gtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||||||||||||||||||||||||||||    
T  33008208 gtgtagacccacaatgatttaaaccaataaaaga 33008241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 3855912 - 3855853
Alignment:
Q  139 cattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||| | || ||||||||| |||||  ||||| ||||||||||||||||||||||||    
T  3855912 cattttatgtgggttcaattttcaaagttcagacctacaatgatttaaaccaataaaaga 3855853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 19422912 - 19422877
Alignment:
Q  163 aagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||||||||||||||||||||||||||    
T  19422912 aagtgtagatccacaatgatttaaaccaataaaaga 19422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Original strand, 27320465 - 27320500
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaa 187  Q
    |||||||||||||||||||||||||||| |||||||    
T  27320465 ttcaatttttaaagtgtagacccacaattatttaaa 27320500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 11824162 - 11824204
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||    
T  11824162 ttcaattttcaaagtgtaaacccacaatgatttaaatcaataa 11824204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 27949364 - 27949406
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||    
T  27949364 ttcaaatttcaaagtgtagacccacaatgatttaaactaataa 27949406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 32212958 - 32212917
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  32212958 ttcaatttttaaaatgtag-cccacaatgatttaaaccaataa 32212917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 39254174 - 39254216
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||    
T  39254174 ttcaatttttaaaatgtagacccacaataatttaaatcaataa 39254216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 203
Target Start/End: Complemental strand, 17813847 - 17813819
Alignment:
Q  175 acaatgatttaaaccaataaaagaataaa 203  Q
    |||||||||||||||||||||||||||||    
T  17813847 acaatgatttaaaccaataaaagaataaa 17813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 36845566 - 36845538
Alignment:
Q  166 tgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataa 36845538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 10948649 - 10948603
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  10948649 ttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaaga 10948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 24429119 - 24429070
Alignment:
Q  147 gaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  24429119 gagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaa 24429070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 19345089 - 19345039
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaataa 202  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  19345089 ttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataa 19345039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 28529342 - 28529384
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  28529342 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 28529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 50156749 - 50156707
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  50156749 ttcaattttaaaagtgtagacccacaatgatttaaaccaataa 50156707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 52124045 - 52124003
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  52124045 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 52124003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18427262 - 18427197
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | || ||| ||||| |||||||||||||||||||||||||||||||||    
T  18427262 tatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataa 18427197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 20493534 - 20493492
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  20493534 ttcaatattcaaagtgtagacccacaatgatttaaaccaataa 20493492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 29588822 - 29588780
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  29588822 ttcaattttcaaagtgtagacccacaatgatttaaatcaataa 29588780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 41451984 - 41451942
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  41451984 ttcaattttcaaagagtagacccacaatgatttaaaccaataa 41451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 44844072 - 44844117
Alignment:
Q  152 ttcaatttttaaagtgta-gacccacaatgatttaaaccaataaaa 196  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  44844072 ttcaatttttaaagtgtatgacccacaatgatttaatccaataaaa 44844117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 742051 - 742095
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||    
T  742051 atttctaaagtgtagacccacaatgatttaaactaataagagaat 742095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 752487 - 752531
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||    
T  752487 atttctaaagtgtagacccacaatgatttaaactaataagagaat 752531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 8825094 - 8825026
Alignment:
Q  126 atatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||| ||||||| | || ||||||||| ||||| || || |||||| ||||||||||||||    
T  8825094 atatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataa 8825026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 26310535 - 26310495
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaat 192  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  26310535 ttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 37285378 - 37285418
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  37285378 atttttaaagtgcagacccacaataatttaaaccaataaaa 37285418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 46450167 - 46450199
Alignment:
Q  162 aaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||||||    
T  46450167 aaagtgtagacccacaatgatttaaaccaataa 46450199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 2009083 - 2009129
Alignment:
Q  150 gtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  2009083 gtttcagtttttaaagtgtagactcacaataatttaaatcaataaaa 2009129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 24734796 - 24734838
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||| |||| |||||||||||||||||||||||    
T  24734796 ttcaattttcaaagagtaggcccacaatgatttaaaccaataa 24734838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 29755591 - 29755633
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||| | ||||||||||||||||||||    
T  29755591 ttcaattttcaaagtgtagatcaacaatgatttaaaccaataa 29755633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 37776792 - 37776754
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaacca 190  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  37776792 ttcaattttcaaagtgtagacctacaatgatttaaacca 37776754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 41707528 - 41707490
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaacca 190  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  41707528 ttcaatttttaaagtatagacccacaataatttaaacca 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 49072100 - 49072138
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  49072100 attttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 2419540 - 2419511
Alignment:
Q  165 gtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||||||||||||||||||||    
T  2419540 gtgtagacccacaatgatttaaaccaataa 2419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 38414715 - 38414780
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | || || ||||||||||||||||| |||| || ||||||||||||||    
T  38414715 tatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataa 38414780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 22604615 - 22604687
Alignment:
Q  116 gataaaatttatatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaac 188  Q
    ||||||||| || ||||||||| ||||||  | |  ||||||||| ||| ||||||| |||||||||||||||    
T  22604615 gataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaac 22604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 35316526 - 35316448
Alignment:
Q  116 gataaaatttatatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| || ||||||||| ||||||| |  | ||||||||||||| |||||||||||||||||||||| ||||||    
T  35316526 gataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataa 35316448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 9470172 - 9470214
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  9470172 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 9470214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 14489626 - 14489580
Alignment:
Q  154 caatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaat 14489580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 38464254 - 38464296
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  38464254 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 38464296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 26767873 - 26767804
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| || |||  |||| ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  26767873 tatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaaga 26767804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 7919359 - 7919317
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  7919359 ttcaattttcaaagtgtagatccacaatgatttaaaccaataa 7919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 25238362 - 25238322
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  25238362 attttcaaagtgtagatccacaatgatttaaaccaataaaa 25238322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 30718412 - 30718372
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  30718412 attttcaaagtgtagactcacaatgatttaaaccaataaaa 30718372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 45554652 - 45554692
Alignment:
Q  154 caatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  45554652 caattttccaagtgtagacccacaatgatttaaaccaataa 45554692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 12989293 - 12989324
Alignment:
Q  163 aagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||||||||||||||||||||||    
T  12989293 aagtgtagacccacaatgatttaaaccaataa 12989324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 17188157 - 17188200
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||    
T  17188157 tcaattttcaaagtgtaggcccagaatgatttaaaccaataaaa 17188200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 4552925 - 4552887
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataa 4552887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 15884520 - 15884562
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||    
T  15884520 ttcaattttcaaaatgtagacccacaattatttaaaccaataa 15884562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 18511334 - 18511256
Alignment:
Q  116 gataaaatttatatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||  || |||||||||  |||||| | || ||||||||| |||||| ||||| |||||| |||||||||||||    
T  18511334 gataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaagacctacaatgttttaaaccaataa 18511256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 19639184 - 19639226
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  19639184 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19639226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 19837777 - 19837819
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  19837777 ttcaattttcaaagtgcagacctacaatgatttaaaccaataa 19837819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 36471927 - 36471881
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||    
T  36471927 ttcaattttcaaaatgtaaactcacaatgatttaaaccaataaaaga 36471881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 44274325 - 44274367
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||    
T  44274325 ttcaactttcaaagtgtagatccacaatgatttaaaccaataa 44274367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 10981622 - 10981651
Alignment:
Q  165 gtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||||||||||||||||||||    
T  10981622 gtgtagacccacaatgatttaaaccaataa 10981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 16719519 - 16719478
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaata 193  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||    
T  16719519 ttcaattttcaaaatgtagacccgcaatgatttaaaccaata 16719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 32701561 - 32701605
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||||||||| ||||| | ||| ||||||||||||||||||||    
T  32701561 ttcaatttttaacgtgtaaatccataatgatttaaaccaataaaa 32701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 45270641 - 45270601
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  45270641 attttgaaagtgtaaactcacaatgatttaaaccaataaaa 45270601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 10133270 - 10133201
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| || |||| | || ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10133270 tatgtcccaccactttatgggggttcaattttcaaagtgtagaaccacaatgatttaaaccaataaaaga 10133201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 32122860 - 32122965
Alignment:
Q  126 atatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaataaaagattgaatattagagagagtg 225  Q
    |||||||||||| ||||||  | |  ||||||||| ||||||||||||||||||||||||| |||||||      |||||  |||||| |||||| ||||    
T  32122860 atatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataa------aaaag--tgaataatagagatagtg 32122951  T
Q  226 ttgctagcattact 239  Q
    ||||||||||||||    
T  32122952 ttgctagcattact 32122965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 16852062 - 16852020
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  16852062 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 16852020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 34905427 - 34905469
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  34905427 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 34905469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 2675989 - 2676065
Alignment:
Q  155 aatttttaaagtgtagacccacaatgatttaaaccaataaaagaataaaagattgaatattagagagagtgttgctagcattact 239  Q
    |||||| ||| ||||||||||||||| |||||||||||||      |||||  ||| ||||||||||||||||||||||||||||    
T  2675989 aattttcaaaatgtagacccacaatggtttaaaccaataa------aaaag--tgagtattagagagagtgttgctagcattact 2676065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 12780848 - 12780806
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  12780848 ttcaattttcaaagtgtagatccacaatgatttaaaccaataa 12780806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 12785028 - 12784980
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||||||| |||||||||| ||| |||||||||||||||||| |||||    
T  12785028 ttcaattttcaaagtgtagatccataatgatttaaaccaataagagaat 12784980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 17144757 - 17144717
Alignment:
Q  155 aatttttaaagtgtagacccacaatgatttaaaccaataaa 195  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  17144757 aattttcaaagtgtagacccacaatgatttaaactaataaa 17144717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 1392719 - 1392760
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  1392719 ttcaatttttaaaatgtag-cccacaatgatttaaaccaataa 1392760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 16187521 - 16187479
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||    
T  16187521 ttcaattttcaaagtgtagacctacaattatttaaaccaataa 16187479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 16187739 - 16187697
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||    
T  16187739 ttcaattttcaaagtgtagacctacaattatttaaaccaataa 16187697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 5106390 - 5106431
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||| |||||||| |||||||| |||||||||||||||    
T  5106390 tcaattttcaaagtgtacacccacaaggatttaaaccaataa 5106431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 445909 - 445957
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||||||| ||||| ||||  ||||||||||||||||||||| |||||    
T  445909 ttcaattttcaaagtctagagtcacaatgatttaaaccaataagagaat 445957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 899972 - 900028
Alignment:
Q  140 attttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||||| || ||||||||| | | | |||||||||||||| ||||||||||||||    
T  899972 attttacgggggttcaattttcataatatagacccacaatgaattaaaccaataaaa 900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 1977262 - 1977216
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  1977262 ttcaattttcaaagtgtagatccacaatgatttaaaccaataaaaga 1977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 8903943 - 8903985
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  8903943 ttcaattttcaaagtgtagacccacaatgatttaaaccaataa 8903985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 17499348 - 17499280
Alignment:
Q  126 atatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||| ||||||  |  | ||||||||| |||||||||| ||||||||||||||||||||||    
T  17499348 atatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataa 17499280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 28413958 - 28413910
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  28413958 ttcaattttcaaagtatagacccataatgatttaaaccaataaaagaat 28413910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 32072188 - 32072236
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  32072188 ttcaatttttaaagtgtagacccacaattatttaaatcaataagagaat 32072236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 35819224 - 35819271
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  35819224 tcaattttcaaagtatagacccacaatgatttaaactaataaaagaat 35819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 8914862 - 8914904
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  8914862 ttcatttttcaaagtgtagacccacaatgatttaaaccaataa 8914904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 9952846 - 9952804
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  9952846 ttcaattttcaaagtgtaaacccacaatgatttaaaccaataa 9952804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 16983485 - 16983527
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  16983485 ttcaattttcaaagtgtagactcacaatgatttaaaccaataa 16983527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 24056014 - 24055972
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  24056014 ttcaattttcaaagtgtagacccacaattatttaaaccaataa 24055972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 35151841 - 35151776
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||  | || |||||||||||||||||||||||||||| ||| |||| |||||    
T  35151841 tatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaataa 35151776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 7493427 - 7493389
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  7493427 attttcaaagtgtagactcacaatgatttaaaccaataa 7493389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 17741639 - 17741573
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaataaa 195  Q
    ||||||||| ||||||  |||  ||||||||| |||||||||||| | |||| ||||||||||||||    
T  17741639 tatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaa 17741573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 35797486 - 35797528
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  35797486 ttcaatttttaaagtgtaaatccacaatgatttaaatcaataa 35797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 4675000 - 4675041
Alignment:
Q  155 aatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  4675000 aattttcaaagtgtagtcacacaatgatttaaaccaataaaa 4675041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 17716916 - 17716977
Alignment:
Q  126 atatatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaa 187  Q
    ||||||||||||  |||||| | || || |||||| |||||||||||||||||||| |||||    
T  17716916 atatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 9193473 - 9193517
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||| |||||||||||| ||||| ||| ||||||||||||    
T  9193473 ttcaattttcaaagtgtagacctacaataattaaaaccaataaaa 9193517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 11962770 - 11962727
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  11962770 ttcaattttcaaagtgtagatcca-aatgatttaaaccaataaaa 11962727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 36337979 - 36337935
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  36337979 ttcaatttccaaagtgtagacccacaatgatttaaaccaataaaa 36337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 25919303 - 25919346
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  25919303 tcaattttcaaagtgtagactcacaatgatttaaaccaataaaa 25919346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 14553580 - 14553642
Alignment:
Q  129 tatgtcccaacattttacgaggtttcaatttttaaagtgtagacccacaatgatttaaaccaa 191  Q
    ||||||| | |||||||||  | |||||||||||||||||||||||||||| | |||||||||    
T  14553580 tatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaa 14553642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 17434934 - 17434892
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  17434934 atttctaaagtgtagacccacattgatttaaaccaataaaaga 17434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 28434907 - 28434865
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  28434907 ttcaattttcaaagtttagacccacaatgatttaaaccaataa 28434865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 28490811 - 28490769
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  28490811 ttcaattttgaaagtgtagacccacaataatttaaaccaataa 28490769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 28611863 - 28611821
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  28611863 atttttaaagtgtagacgcacaatgatttaaatcaataaaaga 28611821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 34368451 - 34368493
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  34368451 ttcatttttcaaagtgtagacccacaatgatttaaaccaataa 34368493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 41330482 - 41330440
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataa 194  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  41330482 ttcaattttcaaagtgtagactcacaatgatttaaaccaataa 41330440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 28223864 - 28223819
Alignment:
Q  153 tcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||    
T  28223864 tcaattttcaaagtatagacccataatgatttaaaccaataaaaga 28223819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 5413826 - 5413782
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||    
T  5413826 ttcaatttacaaagtgtagacccataatgatttaaaccaataaaa 5413782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 25630898 - 25630938
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaat 192  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  25630898 ttcaattttcaaagtgtagacccacgatgatttaaaccaat 25630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 25710557 - 25710513
Alignment:
Q  156 atttttaaagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||    
T  25710557 attttcaaagtgtagacccacaataatttaaaccaataagagaat 25710513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 31885920 - 31885877
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaa 195  Q
    ||||||||| |||||||||| | |||||||||||||||||||||    
T  31885920 ttcaattttcaaagtgtagatctacaatgatttaaaccaataaa 31885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 28090318 - 28090272
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  28090318 ttcaattttcaaagtttagatcaacaatgatttaaaccaataaaaga 28090272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 4427336 - 4427377
Alignment:
Q  155 aatttttaaagtgtagacccacaatgatttaaaccaataaaa 196  Q
    |||||| ||||||||||| ||||||||||||||| |||||||    
T  4427336 aattttcaaagtgtagactcacaatgatttaaacaaataaaa 4427377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 43405494 - 43405526
Alignment:
Q  162 aaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||| ||||||    
T  43405494 aaagtgtagacccacaatgatttaaatcaataa 43405526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 27913 - 27945
Alignment:
Q  162 aaagtgtagacccacaatgatttaaaccaataa 194  Q
    |||||||||||||||||||||||||||||||||    
T  27913 aaagtgtagacccacaatgatttaaaccaataa 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 26951 - 26905
Alignment:
Q  152 ttcaatttttaaagtgtagacccacaatgatttaaaccaataaaaga 198  Q
    ||||||||| |||| ||||||||| |||| |||||||||||||||||    
T  26951 ttcaattttcaaagcgtagacccataatgctttaaaccaataaaaga 26905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 8489 - 8452
Alignment:
Q  163 aagtgtagacccacaatgatttaaaccaataaaagaat 200  Q
    |||||||||| || ||||||||||||||||||||||||    
T  8489 aagtgtagactcataatgatttaaaccaataaaagaat 8452  T

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