View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2649_low_20 (Length: 249)

Name: NF2649_low_20
Description: NF2649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2649_low_20
NF2649_low_20
[»] chr6 (3 HSPs)
chr6 (1-233)||(8533679-8533911)
chr6 (1-230)||(24186021-24186250)
chr6 (1-230)||(20788288-20788517)
[»] chr1 (6 HSPs)
chr1 (1-233)||(49245126-49245358)
chr1 (1-206)||(41699384-41699589)
chr1 (1-206)||(41704978-41705183)
chr1 (1-230)||(24343654-24343883)
chr1 (1-230)||(24356032-24356261)
chr1 (4-205)||(40249539-40249740)
[»] chr4 (1 HSPs)
chr4 (1-206)||(54077361-54077566)
[»] chr5 (2 HSPs)
chr5 (1-206)||(23557667-23557872)
chr5 (11-130)||(17831829-17831948)
[»] chr3 (5 HSPs)
chr3 (40-213)||(26301801-26301974)
chr3 (1-230)||(414177-414406)
chr3 (1-230)||(49960759-49960988)
chr3 (74-230)||(411690-411846)
chr3 (1-65)||(409536-409600)
[»] chr7 (1 HSPs)
chr7 (1-206)||(35049753-35049958)
[»] chr2 (2 HSPs)
chr2 (1-230)||(15048839-15049068)
chr2 (145-203)||(15229950-15230008)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-104)||(44058-44161)
[»] chr8 (1 HSPs)
chr8 (84-130)||(13388203-13388249)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8533679 - 8533911
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8533679 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 8533778  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8533779 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagttctttaataga 8533878  T
Q  201 ctcatattctgagtatttaccaaacttttcagg 233  Q
    |||||||||||||||||||||||||||||||||    
T  8533879 ctcatattctgagtatttaccaaacttttcagg 8533911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24186021 - 24186250
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||||||||||||||| || ||  ||||||||||||||||||||||||| |    
T  24186021 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcaggaacccaacgatgccgttcaacaaatatccctttcaaccattcattgt 24186120  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    ||||||||   ||||| |||||||| ||||||||| ||   |  |||||||||||||| |||||||| ||||||  | |||||||||||| ||| |||||    
T  24186121 catgtagcttgtaacactcaatcatattttcccacttcatcataaaatcacttttgctaaaagaatcgtatacaatatcatgcaaaagtgttttgataga 24186220  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || |||| | |||||||||||||    
T  24186221 ctcgtagtcagagtgtctaccaaacttttc 24186250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20788288 - 20788517
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||| ||||   ||| || |||||  |||| |||||||||||||||||  |||||| ||||||||||||||| ||||    
T  20788288 cttcgttgtgtagttgacattccagcctaaaatgtgtcccttacatatgcagggacccaacgatgtcgctcaacaaataaccctttcaaccattcgttat 20788387  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    | |||||    ||||| |||||||| |||| |||||||   |  |||||||||||| | |||||||||||||||  | |||||||||||| ||| |||||    
T  20788388 cctgtagtttgtaacactcaatcatattttgccacctcgtcataaaatcacttttggtaaaagaatcatatacaatatcatgcaaaagtgttttgataga 20788487  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || ||||   |||||||||||||    
T  20788488 ctcgtagtcagagtggctaccaaacttttc 20788517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 49245358 - 49245126
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||| ||||||||||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49245358 cttcgtcgtgtagttgacatcccgacccaaaacacaaccctcacatacactggaacccaacgatgtcgctcatcaaatatccctttcaaccattcattat 49245259  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||    
T  49245258 catgtatctcataacattcaatcattttttcccacatctctatgaaatcacttttgctcaaagaatcatatacaacatcatgcaaacgtgctttaataga 49245159  T
Q  201 ctcatattctgagtatttaccaaacttttcagg 233  Q
    |||||||||||||||||||||||||||||||||    
T  49245158 ctcatattctgagtatttaccaaacttttcagg 49245126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41699589 - 41699384
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  41699589 cttcgttgtgtagttgacattccagcccaaaatgtgtctctcacatacacaggaacccaacgatgacgctcatcaaacaaccctttcaaccattcattat 41699490  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||| ||  |||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| || ||| |||||||||||  ||| |||||    
T  41699489 catgaagttcataacattcaatcattttttcccacttctccatgaaatcacttatgctcaaagaatcatacaccgcatcatgcaaaagtattttgataga 41699390  T
Q  201 ctcata 206  Q
    ||||||    
T  41699389 ctcata 41699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41705183 - 41704978
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   |||||||| ||| ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  41705183 cttcgttgtgtagttgacattccagcccaaaatgtgtctctcaaatatacaggaacccaacgatgacgctcatcaaacaaccctttcaaccattcattat 41705084  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||| ||  |||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| || ||| |||||||||||  ||| |||||    
T  41705083 catgaagttcataacattcaatcattttttcccacttctccatgaaatcacttatgctcaaagaatcatacaccgcatcatgcaaaagtattttgataga 41704984  T
Q  201 ctcata 206  Q
    ||||||    
T  41704983 ctcata 41704978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 24343883 - 24343654
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||||||||||||||| || ||  |||||| |||||||||| ||||||| |    
T  24343883 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcaggaacccaacgatgccgttcaacaaataaccctttcaactattcattgt 24343784  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    ||||||||   ||||| |||||||| ||||||||| ||   |  |||||||||||||| |||||||| ||||||  | |||||||||||| ||| |||||    
T  24343783 catgtagcttgtaacactcaatcatattttcccacttcatcataaaatcacttttgctaaaagaatcgtatacaatatcatgcaaaagtgttttgataga 24343684  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || |||| | |||||||||||||    
T  24343683 ctcgtagtcagagtgtctaccaaacttttc 24343654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 24356261 - 24356032
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||||||||||||||| || ||  |||||| |||||||||| ||||||| |    
T  24356261 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcaggaacccaacgatgccgttcaacaaataaccctttcaacaattcattgt 24356162  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    ||||||||   ||||| |||||||| ||||||||| ||   |  |||||||||||||| |||||||| ||||||  | |||||||||||| ||| |||||    
T  24356161 catgtagcttgtaacactcaatcatattttcccacttcatcataaaatcacttttgctaaaagaatcgtatacaatatcatgcaaaagtgttttgataga 24356062  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || |||| | |||||||||||||    
T  24356061 ctcgtagtcagagtgtctaccaaacttttc 24356032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 40249740 - 40249539
Alignment:
Q  4 cgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattatcat 103  Q
    ||||||| ||| ||||| || ||||||||   |||| |||||||||||||||||||||| || ||||| ||||||| || ||| ||||||||||||||||    
T  40249740 cgttgtgcagtcgacattccagcccaaaatgtgtctttcacatacacaggaacccaacggtgccgctcatcaaataaccattttaaccattcattatcat 40249641  T
Q  104 gtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaatagactc 203  Q
    ||||   ||||  ||| ||||| ||| |||||||||| | ||||||||||||||||| ||| ||||||||  || | |||||||||| ||| ||||||||    
T  40249640 gtagattataatgttctatcatatttccccacctctccatgaaatcacttttgctcatagagtcatataccacatcctgcaaaagtgttttgatagactc 40249541  T
Q  204 at 205  Q
    ||    
T  40249540 at 40249539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 54077361 - 54077566
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  54077361 cttcgttgtgtagttgacattccagcccaaaatgtgtctctcacatacacaggaacccaacgatgacgctcatcaaacaaccctttcaaccattcattat 54077460  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||| ||  |||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| || ||| |||||||||||  ||| |||||    
T  54077461 catgaagttcataacattcaatcattttttcccacttctccatgaaatcacttatgctcaaagaatcatacaccgcatcatgcaaaagtattttgataga 54077560  T
Q  201 ctcata 206  Q
    ||||||    
T  54077561 ctcata 54077566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 23557872 - 23557667
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   |||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||    
T  23557872 cttcgttgtgtagttgacattccagcccaaaatgtgtctctcacatacacaggaacccaacgatgacgctcatcaaacaaccctttcaaccattcattat 23557773  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||| ||  |||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| || ||| |||||||||||  ||| |||||    
T  23557772 catgaagttcataacattcaatcattttttcccacttctccatgaaatcacttatgctcaaagaatcatacaccgcatcatgcaaaagtattttgataga 23557673  T
Q  201 ctcata 206  Q
     |||||    
T  23557672 atcata 23557667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 17831829 - 17831948
Alignment:
Q  11 tagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattatcatgtagcgc 110  Q
    |||||||||| || |||||||| | |||||| ||||||||| ||||||| |    |||| | | ||||| |||||||||||||||||||||||| ||  |    
T  17831829 tagttgacattccagcccaaaatatgtctctaacatacacatgaacccatccgaatcgcgcattaaatagccctttcaaccattcattatcatgcagttc 17831928  T
Q  111 ataacattcaatcatttttt 130  Q
    |||| |||||||| ||||||    
T  17831929 ataaaattcaatcttttttt 17831948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 26301974 - 26301801
Alignment:
Q  40 ctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattatcatgtagcgcataacattcaatcattttttcccacctct 139  Q
    |||||||||||| ||||||||| ||||||||  |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||||    
T  26301974 ctcacatacacaagaacccaacaatgtcgcttatcaaatatacctttcaaccattcattatcatatagttcataacattcaatcattttttcctacctct 26301875  T
Q  140 ctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaatagactcatattctgag 213  Q
    ||| ||||||||||||||||||||||| |||||||  | ||||||||| |||||||| | ||||||||||||||    
T  26301874 ctatgaaatcacttttgctcaaagaattatatacaatatcatgcaaaattgctttaagaaactcatattctgag 26301801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 414406 - 414177
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||||||||||||||| || ||  ||||||||||||||||||||||||| |    
T  414406 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcaggaacccaacgatgccgttcaacaaatatccctttcaaccattcattgt 414307  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    ||||||||   ||||| |||||||| ||||||||| ||   |  |||||||||||||| |||||||| ||||||  | |||||||||||| ||| |||||    
T  414306 catgtagcttgtaacactcaatcatattttcccacttcatcataaaatcacttttgctaaaagaatcgtatacaatatcatgcaaaagtgttttgataga 414207  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || |||| | |||||||||||||    
T  414206 ctcgtagtcagagtgtctaccaaacttttc 414177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 49960988 - 49960759
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||| |||||||||||||||||  |||||| |||||||| |||||||||||    
T  49960988 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcagggacccaacgatgtcgctcaacaaataaccctttcagccattcattat 49960889  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    | |||||    ||| | |||||||| ||||||||||||   |  |||||||||||||| |||||||||||||||  | |||||||||||| ||| |||||    
T  49960888 cctgtagtttgtaaaactcaatcatattttcccacctcgtcataaaatcacttttgctaaaagaatcatatacaatatcatgcaaaagtgttttgataga 49960789  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || ||||   |||||||||||||    
T  49960788 ctcgtagtcagagtgactaccaaacttttc 49960759  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 411690 - 411846
Alignment:
Q  74 caaatatccctttcaaccattcattatcatgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatac 173  Q
    ||||||||||||||||||||||||| |||||||||   ||||| |||||||| ||||||||| ||   |  |||||||||||||| |||||||| |||||    
T  411690 caaatatccctttcaaccattcattgtcatgtagcttgtaacactcaatcatattttcccacttcatcataaaatcacttttgctaaaagaatcgtatac 411789  T
Q  174 agcagcatgcaaaagtgctttaatagactcatattctgagtatttaccaaacttttc 230  Q
    |  | |||||||||||| ||| |||||||| || || |||| |||||||||||||||    
T  411790 aatatcatgcaaaagtgttttgatagactcgtagtcagagtgtttaccaaacttttc 411846  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 409536 - 409600
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatg 65  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  ||||||||||||||||    
T  409536 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcaggaacccaacgatg 409600  T

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Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35049958 - 35049753
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   |||||| |||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||    
T  35049958 cttcgttgtgtagttgacattccagcccaaaatgtgtctctaacatacacaggaacccaacgatatctctcatcaaatagccctttcaaccattcattat 35049859  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    |||| ||  | ||||||||||||||||||| |||| |||| | |||||||  | ||||| |||||||||| |||||| |||||||||||  ||| |||||    
T  35049858 catgcagttcgtaacattcaatcatttttttccacttctccatgaaatcagatatgctcgaagaatcatacacagcatcatgcaaaagtaatttgataga 35049759  T
Q  201 ctcata 206  Q
    ||||||    
T  35049758 ctcata 35049753  T

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Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 15048839 - 15049068
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    |||||||||||||||||||| || ||||||||   ||| || |||||  |||| |||||||||||||||||  |||||| ||||||||||||||| ||||    
T  15048839 cttcgttgtgtagttgacattccagcccaaaatgtgtcccttacatatgcagggacccaacgatgtcgctcaacaaataaccctttcaaccattcgttat 15048938  T
Q  101 catgtagcgcataacattcaatcattttttcccacctctctaagaaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaataga 200  Q
    | |||||    ||||| |||||||| ||||||||||||   |  |||||||||||| | |||||||||||||||  | |||||||||||| ||| |||||    
T  15048939 cctgtagtttgtaacactcaatcatattttcccacctcgtcataaaatcacttttggtaaaagaatcatatacaatatcatgcaaaagtgttttgataga 15049038  T
Q  201 ctcatattctgagtatttaccaaacttttc 230  Q
    ||| || || ||||   |||||||||||||    
T  15049039 ctcgtagtcagagtgactaccaaacttttc 15049068  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 15229950 - 15230008
Alignment:
Q  145 aaatcacttttgctcaaagaatcatatacagcagcatgcaaaagtgctttaatagactc 203  Q
    |||||||||||||| |||||||||||||||  | |||||||||||| ||| ||||||||    
T  15229950 aaatcacttttgctaaaagaatcatatacaatatcatgcaaaagtgttttgatagactc 15230008  T

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Target: scaffold0045 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44161 - 44058
Alignment:
Q  1 cttcgttgtgtagttgacatcccggcccaaaacacgtctctcacatacacaggaacccaacgatgtcgctcctcaaatatccctttcaaccattcattat 100  Q
    ||||||||||| |||||||| || | |  ||| | | |||||||||||||| ||||||||| ||| ||||| ||||||| ||||||||||||||||||||    
T  44161 cttcgttgtgttgttgacattccagtctcaaatatgactctcacatacacaagaacccaactatgacgctcatcaaataaccctttcaaccattcattat 44062  T
Q  101 catg 104  Q
    ||||    
T  44061 catg 44058  T

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Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 13388249 - 13388203
Alignment:
Q  84 tttcaaccattcattatcatgtagcgcataacattcaatcatttttt 130  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||    
T  13388249 tttcaaccattcattatcatgcagttcataacattcaatcatttttt 13388203  T

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