View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2651_low_18 (Length: 341)

Name: NF2651_low_18
Description: NF2651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2651_low_18
NF2651_low_18
[»] chr2 (1 HSPs)
chr2 (33-326)||(7150470-7150760)


Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 33 - 326
Target Start/End: Original strand, 7150470 - 7150760
Alignment:
Q  33 tagaacttttatatagataaggattcattctacgtattcaccattttattgattgtttgatggatatcgaacgctgatctcaatctaataat-accgatt 131  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||    
T  7150470 tagaacttttgcatagataaggattcattctacgtattcaccattttattgattgtttgatggatatcgaacgctgatctcaatccaataatcatcgatt 7150569  T
Q  132 aggtgaatgcatgagtctagggaacaagatccctattcccacacataatatataactgaaattgatatgttaatgaacatgggaaggatatattttaaat 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||| |||||||||    
T  7150570 aggtgaatgcatgaatctagggaacaagatccctattcccacacataata----actgaaattgatatgttaatgaacatgggaaggataaattttaaat 7150665  T
Q  232 aagagtaaccaacataaaattgtcttttataccagtattgtttatttatctgaccgtacgtatgaaagatacaaaatatgtgacaccataataat 326  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7150666 aagagtaactaacataaaattgtcttttatactagtattgtttatttatctgaccgaacgtatgaaagatacaaaatatgtgacaccataataat 7150760  T

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