View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2652_high_16 (Length: 459)

Name: NF2652_high_16
Description: NF2652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2652_high_16
NF2652_high_16
[»] chr6 (25 HSPs)
chr6 (134-303)||(4831520-4831687)
chr6 (338-459)||(21542465-21542586)
chr6 (340-459)||(11082240-11082359)
chr6 (338-459)||(7274868-7274989)
chr6 (338-459)||(35129047-35129169)
chr6 (338-459)||(34177634-34177755)
chr6 (338-440)||(4032051-4032156)
chr6 (344-459)||(3095719-3095833)
chr6 (367-440)||(16524443-16524516)
chr6 (366-440)||(16013453-16013527)
chr6 (367-440)||(4988007-4988080)
chr6 (338-439)||(15830760-15830861)
chr6 (338-459)||(12461422-12461543)
chr6 (337-434)||(5822026-5822123)
chr6 (344-459)||(30794191-30794306)
chr6 (338-445)||(16870785-16870892)
chr6 (367-437)||(3888494-3888564)
chr6 (337-438)||(16655254-16655355)
chr6 (338-446)||(5300604-5300701)
chr6 (17-77)||(4831080-4831140)
chr6 (337-459)||(21964000-21964122)
chr6 (378-459)||(31107237-31107318)
chr6 (337-445)||(5881745-5881852)
chr6 (337-376)||(7163732-7163771)
chr6 (338-459)||(17751737-17751858)
[»] chr7 (45 HSPs)
chr7 (338-459)||(46760249-46760370)
chr7 (338-459)||(6191092-6191213)
chr7 (338-459)||(18102577-18102698)
chr7 (338-459)||(45486002-45486123)
chr7 (338-459)||(14805917-14806037)
chr7 (338-459)||(15252911-15253031)
chr7 (338-459)||(22632136-22632257)
chr7 (338-459)||(25737619-25737740)
chr7 (338-459)||(35923299-35923419)
chr7 (338-438)||(35887961-35888061)
chr7 (338-459)||(19912761-19912882)
chr7 (340-459)||(25944623-25944742)
chr7 (338-459)||(12632336-12632457)
chr7 (338-459)||(47779651-47779772)
chr7 (338-440)||(10248594-10248698)
chr7 (344-438)||(39170602-39170696)
chr7 (338-459)||(4910627-4910746)
chr7 (357-459)||(20123691-20123793)
chr7 (340-439)||(3778045-3778144)
chr7 (338-445)||(38260377-38260484)
chr7 (382-451)||(35068885-35068954)
chr7 (375-439)||(31768991-31769055)
chr7 (338-452)||(16917525-16917639)
chr7 (337-437)||(37767010-37767110)
chr7 (400-458)||(9158137-9158195)
chr7 (337-459)||(33153081-33153203)
chr7 (340-452)||(14574618-14574730)
chr7 (337-445)||(29713250-29713358)
chr7 (378-459)||(47557631-47557714)
chr7 (400-459)||(4069050-4069109)
chr7 (337-395)||(22369327-22369385)
chr7 (379-459)||(31549936-31550016)
chr7 (340-440)||(40560443-40560543)
chr7 (346-454)||(44682929-44683037)
chr7 (337-459)||(35084051-35084173)
chr7 (339-376)||(7041651-7041688)
chr7 (408-459)||(2610630-2610681)
chr7 (404-451)||(24151640-24151687)
chr7 (404-459)||(48413765-48413820)
chr7 (405-459)||(8015732-8015786)
chr7 (340-452)||(15995773-15995886)
chr7 (337-454)||(29236019-29236135)
chr7 (337-373)||(30082479-30082515)
chr7 (366-434)||(33092658-33092726)
chr7 (340-440)||(48879449-48879549)
[»] chr8 (54 HSPs)
chr8 (338-459)||(7022397-7022518)
chr8 (338-459)||(26483577-26483698)
chr8 (338-459)||(34890168-34890289)
chr8 (338-459)||(36190817-36190938)
chr8 (339-440)||(41362302-41362403)
chr8 (338-459)||(17713268-17713389)
chr8 (338-459)||(43216341-43216462)
chr8 (338-440)||(17336806-17336908)
chr8 (338-458)||(13143939-13144060)
chr8 (338-459)||(7858573-7858694)
chr8 (378-459)||(31734160-31734241)
chr8 (344-459)||(8745628-8745743)
chr8 (337-451)||(2628157-2628271)
chr8 (338-459)||(30575828-30575950)
chr8 (338-440)||(38072227-38072329)
chr8 (340-440)||(8673445-8673550)
chr8 (344-459)||(41086386-41086501)
chr8 (339-459)||(24892883-24893006)
chr8 (338-459)||(29920262-29920383)
chr8 (338-438)||(4038876-4038975)
chr8 (338-459)||(8711922-8712038)
chr8 (339-459)||(28497133-28497253)
chr8 (384-459)||(35525632-35525707)
chr8 (342-440)||(17314894-17314992)
chr8 (338-459)||(34158284-34158406)
chr8 (378-459)||(15957945-15958026)
chr8 (340-458)||(28348656-28348774)
chr8 (338-459)||(16358106-16358226)
chr8 (338-459)||(35456014-35456139)
chr8 (338-451)||(5217445-5217557)
chr8 (382-459)||(13143809-13143886)
chr8 (352-451)||(27819712-27819811)
chr8 (338-459)||(4046887-4047009)
chr8 (338-459)||(8709780-8709901)
chr8 (382-454)||(8107656-8107728)
chr8 (382-440)||(25195085-25195142)
chr8 (340-445)||(6401679-6401784)
chr8 (338-451)||(8712577-8712690)
chr8 (394-451)||(26954442-26954499)
chr8 (415-459)||(7499772-7499816)
chr8 (339-446)||(34899983-34900090)
chr8 (400-447)||(2052891-2052938)
chr8 (343-438)||(29147236-29147331)
chr8 (338-420)||(2052947-2053029)
chr8 (378-438)||(4480841-4480901)
chr8 (413-459)||(3642039-3642084)
chr8 (340-398)||(14574973-14575031)
chr8 (389-439)||(14693434-14693484)
chr8 (352-453)||(16879400-16879501)
chr8 (348-432)||(15824641-15824725)
chr8 (338-388)||(45190700-45190750)
chr8 (337-373)||(2238588-2238624)
chr8 (342-390)||(11158675-11158723)
chr8 (341-409)||(12108251-12108319)
[»] chr4 (61 HSPs)
chr4 (338-459)||(7654662-7654783)
chr4 (338-459)||(20281636-20281757)
chr4 (338-459)||(47867924-47868045)
chr4 (338-459)||(2229292-2229413)
chr4 (338-459)||(4058760-4058881)
chr4 (338-459)||(26916370-26916491)
chr4 (338-458)||(10069743-10069863)
chr4 (338-459)||(14332805-14332926)
chr4 (338-438)||(5064641-5064741)
chr4 (343-459)||(16604837-16604953)
chr4 (338-458)||(41414597-41414717)
chr4 (338-440)||(28142608-28142710)
chr4 (338-459)||(29203551-29203672)
chr4 (338-459)||(39078202-39078322)
chr4 (346-451)||(46070517-46070621)
chr4 (344-459)||(35310734-35310849)
chr4 (338-459)||(20716225-20716346)
chr4 (338-439)||(32410393-32410494)
chr4 (338-459)||(55580715-55580836)
chr4 (338-458)||(17794527-17794647)
chr4 (339-459)||(42915575-42915695)
chr4 (351-451)||(47516190-47516290)
chr4 (338-445)||(8013075-8013182)
chr4 (338-440)||(37911948-37912050)
chr4 (338-459)||(5483264-5483385)
chr4 (338-440)||(28318408-28318505)
chr4 (339-459)||(5841766-5841886)
chr4 (338-446)||(53848518-53848626)
chr4 (340-459)||(56318058-56318177)
chr4 (338-459)||(48793616-48793735)
chr4 (338-459)||(8683292-8683413)
chr4 (338-459)||(24940410-24940531)
chr4 (338-458)||(28668987-28669107)
chr4 (357-451)||(8178244-8178338)
chr4 (370-439)||(29511490-29511559)
chr4 (369-440)||(49080321-49080392)
chr4 (340-420)||(16473832-16473912)
chr4 (338-440)||(32203277-32203379)
chr4 (338-446)||(21722668-21722776)
chr4 (342-402)||(40411752-40411812)
chr4 (378-459)||(5815514-5815595)
chr4 (378-459)||(17186822-17186902)
chr4 (338-459)||(1585335-1585454)
chr4 (339-416)||(36542894-36542974)
chr4 (338-452)||(19351899-19352018)
chr4 (344-459)||(17799126-17799241)
chr4 (416-459)||(35529717-35529760)
chr4 (338-392)||(12002619-12002673)
chr4 (381-439)||(32323291-32323349)
chr4 (385-459)||(50145781-50145854)
chr4 (348-454)||(40553819-40553929)
chr4 (383-459)||(25268524-25268600)
chr4 (338-444)||(14583789-14583895)
chr4 (416-459)||(25297286-25297329)
chr4 (406-440)||(23978169-23978203)
chr4 (345-414)||(17236262-17236331)
chr4 (338-459)||(50080442-50080558)
chr4 (344-392)||(7438760-7438808)
chr4 (338-374)||(23978134-23978170)
chr4 (338-414)||(24965258-24965333)
chr4 (422-458)||(52535655-52535691)
[»] chr1 (75 HSPs)
chr1 (338-459)||(2126085-2126206)
chr1 (338-459)||(15959633-15959754)
chr1 (338-459)||(24190516-24190637)
chr1 (338-459)||(32623998-32624119)
chr1 (338-459)||(39555579-39555700)
chr1 (338-440)||(7397772-7397874)
chr1 (338-440)||(45840059-45840160)
chr1 (338-440)||(50176588-50176690)
chr1 (338-459)||(6786885-6787006)
chr1 (338-459)||(11241074-11241195)
chr1 (338-459)||(33369598-33369718)
chr1 (338-459)||(45226185-45226306)
chr1 (337-459)||(5950486-5950611)
chr1 (338-440)||(30701378-30701480)
chr1 (338-451)||(16688191-16688304)
chr1 (338-451)||(28016739-28016852)
chr1 (338-459)||(44148829-44148950)
chr1 (339-459)||(6785503-6785622)
chr1 (342-458)||(42965813-42965928)
chr1 (342-440)||(25185300-25185399)
chr1 (340-451)||(35366198-35366309)
chr1 (338-459)||(3076342-3076463)
chr1 (378-459)||(12449000-12449081)
chr1 (338-451)||(33431614-33431727)
chr1 (338-459)||(35691440-35691560)
chr1 (338-451)||(37538864-37538977)
chr1 (367-451)||(5858393-5858477)
chr1 (340-459)||(46818497-46818616)
chr1 (338-459)||(24728619-24728741)
chr1 (338-459)||(13136547-13136667)
chr1 (338-459)||(32983165-32983284)
chr1 (338-459)||(40718725-40718846)
chr1 (338-459)||(43667296-43667417)
chr1 (338-439)||(44510212-44510313)
chr1 (338-420)||(13352180-13352262)
chr1 (339-459)||(47014487-47014605)
chr1 (344-459)||(46543029-46543144)
chr1 (338-451)||(41063796-41063910)
chr1 (341-434)||(46803667-46803760)
chr1 (338-459)||(52984980-52985101)
chr1 (367-446)||(8889719-8889798)
chr1 (341-446)||(7467958-7468064)
chr1 (337-459)||(30221772-30221894)
chr1 (349-459)||(39932576-39932686)
chr1 (337-451)||(52841437-52841551)
chr1 (349-459)||(3861699-3861809)
chr1 (343-459)||(1820462-1820578)
chr1 (338-459)||(28120748-28120869)
chr1 (338-459)||(32742195-32742316)
chr1 (367-439)||(15912265-15912336)
chr1 (378-445)||(2246047-2246114)
chr1 (400-459)||(47600094-47600153)
chr1 (396-458)||(50370009-50370071)
chr1 (338-459)||(3875012-3875135)
chr1 (396-459)||(16854187-16854250)
chr1 (344-403)||(43359737-43359796)
chr1 (339-413)||(4672924-4672998)
chr1 (405-459)||(6787050-6787104)
chr1 (385-459)||(10558796-10558870)
chr1 (370-440)||(16661582-16661651)
chr1 (337-443)||(36383987-36384093)
chr1 (337-451)||(51840488-51840601)
chr1 (338-450)||(1034913-1035023)
chr1 (338-459)||(7875933-7876056)
chr1 (404-459)||(32318619-32318674)
chr1 (382-452)||(43765348-43765418)
chr1 (394-459)||(23392215-23392280)
chr1 (378-459)||(37735416-37735497)
chr1 (400-440)||(13351746-13351786)
chr1 (339-376)||(6304791-6304828)
chr1 (346-451)||(13291844-13291949)
chr1 (386-451)||(51338938-51339003)
chr1 (382-454)||(25391734-25391805)
chr1 (337-439)||(35941904-35942006)
chr1 (426-459)||(14086997-14087030)
[»] scaffold0300 (1 HSPs)
scaffold0300 (338-459)||(566-687)
[»] chr5 (50 HSPs)
chr5 (338-459)||(20644061-20644182)
chr5 (339-458)||(34425378-34425497)
chr5 (338-459)||(6686431-6686553)
chr5 (338-459)||(42273694-42273815)
chr5 (338-459)||(43589955-43590076)
chr5 (338-459)||(11261877-11261998)
chr5 (342-459)||(12912292-12912408)
chr5 (344-459)||(19413188-19413303)
chr5 (337-459)||(20039149-20039271)
chr5 (338-438)||(5736233-5736333)
chr5 (352-440)||(16153353-16153440)
chr5 (348-459)||(37522592-37522703)
chr5 (338-459)||(37562754-37562876)
chr5 (338-459)||(25840911-25841032)
chr5 (344-440)||(3463816-3463910)
chr5 (340-440)||(8506497-8506597)
chr5 (347-440)||(1144493-1144586)
chr5 (343-440)||(29307185-29307282)
chr5 (345-459)||(38130113-38130230)
chr5 (367-451)||(5369053-5369137)
chr5 (342-451)||(30703656-30703765)
chr5 (384-457)||(32111051-32111124)
chr5 (367-439)||(8959707-8959779)
chr5 (338-459)||(4463407-4463526)
chr5 (340-450)||(43454318-43454428)
chr5 (338-458)||(39505225-39505346)
chr5 (384-459)||(38280894-38280969)
chr5 (350-458)||(41625517-41625624)
chr5 (337-440)||(18718645-18718748)
chr5 (345-439)||(32432319-32432414)
chr5 (378-459)||(8225508-8225590)
chr5 (378-451)||(5984141-5984214)
chr5 (338-459)||(23233458-23233579)
chr5 (401-458)||(32017751-32017808)
chr5 (396-459)||(104265-104328)
chr5 (370-440)||(28907135-28907204)
chr5 (370-440)||(28943530-28943599)
chr5 (340-437)||(32079573-32079670)
chr5 (384-459)||(42104287-42104362)
chr5 (337-459)||(24439617-24439739)
chr5 (338-459)||(12792779-12792890)
chr5 (338-459)||(17351435-17351556)
chr5 (414-458)||(9957488-9957532)
chr5 (404-448)||(10153987-10154031)
chr5 (377-451)||(6391924-6391998)
chr5 (338-459)||(12729878-12729988)
chr5 (340-384)||(10153937-10153981)
chr5 (337-392)||(30893242-30893297)
chr5 (337-392)||(36413928-36413983)
chr5 (344-445)||(3103329-3103428)
[»] chr3 (69 HSPs)
chr3 (338-459)||(30189622-30189743)
chr3 (338-459)||(50650989-50651110)
chr3 (338-459)||(579097-579211)
chr3 (341-440)||(22479009-22479108)
chr3 (338-440)||(10114975-10115077)
chr3 (338-459)||(37042369-37042490)
chr3 (345-440)||(22455967-22456062)
chr3 (344-459)||(23311551-23311666)
chr3 (338-440)||(10014333-10014435)
chr3 (338-440)||(10252075-10252177)
chr3 (342-459)||(11054267-11054385)
chr3 (338-451)||(8096970-8097083)
chr3 (338-458)||(46711610-46711730)
chr3 (338-459)||(7866435-7866556)
chr3 (338-435)||(25242130-25242227)
chr3 (338-451)||(34194941-34195054)
chr3 (338-457)||(23910465-23910584)
chr3 (337-459)||(36546593-36546715)
chr3 (337-459)||(36561600-36561722)
chr3 (338-451)||(9264610-9264723)
chr3 (338-459)||(14752160-14752281)
chr3 (338-459)||(28875457-28875578)
chr3 (338-459)||(35963203-35963324)
chr3 (342-459)||(37075011-37075128)
chr3 (338-440)||(38401444-38401550)
chr3 (339-436)||(47443927-47444023)
chr3 (338-440)||(21214305-21214410)
chr3 (338-459)||(2927340-2927462)
chr3 (378-459)||(6438134-6438215)
chr3 (342-451)||(7886573-7886682)
chr3 (338-459)||(29235238-29235359)
chr3 (338-459)||(47864242-47864363)
chr3 (347-451)||(46918174-46918278)
chr3 (339-459)||(19464126-19464248)
chr3 (348-451)||(30454687-30454789)
chr3 (338-443)||(41476287-41476393)
chr3 (338-459)||(31836970-31837091)
chr3 (338-418)||(2994367-2994447)
chr3 (338-458)||(54464848-54464967)
chr3 (338-459)||(6075132-6075253)
chr3 (338-459)||(53270286-53270406)
chr3 (367-438)||(6784390-6784461)
chr3 (380-459)||(16032981-16033060)
chr3 (337-459)||(26724942-26725064)
chr3 (338-459)||(50730160-50730281)
chr3 (338-459)||(50782573-50782694)
chr3 (338-458)||(8703160-8703277)
chr3 (338-458)||(9055047-9055164)
chr3 (338-445)||(26208079-26208186)
chr3 (341-412)||(49584049-49584119)
chr3 (344-430)||(17587779-17587865)
chr3 (404-459)||(34722623-34722678)
chr3 (384-454)||(32619828-32619898)
chr3 (338-446)||(54725573-54725670)
chr3 (338-446)||(33973518-33973627)
chr3 (382-450)||(3972335-3972402)
chr3 (382-450)||(3997476-3997543)
chr3 (337-459)||(30612222-30612344)
chr3 (337-402)||(27875881-27875946)
chr3 (337-440)||(37324037-37324141)
chr3 (337-440)||(31126275-31126378)
chr3 (338-459)||(8769531-8769650)
chr3 (344-450)||(23209238-23209344)
chr3 (383-459)||(20847265-20847341)
chr3 (416-459)||(6752721-6752764)
chr3 (338-435)||(46557122-46557219)
chr3 (421-459)||(46557236-46557274)
chr3 (343-432)||(34105608-34105697)
chr3 (338-453)||(8764631-8764744)
[»] scaffold0330 (1 HSPs)
scaffold0330 (338-440)||(3234-3336)
[»] scaffold0045 (1 HSPs)
scaffold0045 (338-459)||(78004-78125)
[»] chr2 (42 HSPs)
chr2 (338-459)||(3201373-3201494)
chr2 (338-459)||(6110191-6110312)
chr2 (338-459)||(19264147-19264268)
chr2 (340-459)||(28599142-28599261)
chr2 (337-440)||(32010168-32010271)
chr2 (340-440)||(32273737-32273841)
chr2 (338-459)||(45660412-45660536)
chr2 (338-459)||(8701649-8701770)
chr2 (338-459)||(35517170-35517291)
chr2 (338-459)||(45085304-45085425)
chr2 (338-458)||(25572093-25572213)
chr2 (344-440)||(38071061-38071157)
chr2 (338-440)||(26998383-26998485)
chr2 (338-451)||(11617079-11617192)
chr2 (338-440)||(4891630-4891733)
chr2 (338-459)||(12938289-12938410)
chr2 (338-459)||(29524033-29524154)
chr2 (338-459)||(41528303-41528425)
chr2 (378-459)||(14874010-14874091)
chr2 (338-459)||(40808712-40808832)
chr2 (339-459)||(33198624-33198744)
chr2 (338-451)||(28858364-28858480)
chr2 (338-459)||(6765925-6766046)
chr2 (338-439)||(43415468-43415569)
chr2 (352-439)||(44442198-44442286)
chr2 (338-459)||(9864710-9864832)
chr2 (338-459)||(33677530-33677651)
chr2 (347-446)||(11030928-11031030)
chr2 (364-451)||(9709568-9709655)
chr2 (338-452)||(24204521-24204635)
chr2 (338-459)||(35115795-35115917)
chr2 (337-444)||(35022961-35023067)
chr2 (373-440)||(20380189-20380256)
chr2 (338-459)||(7645219-7645340)
chr2 (337-433)||(33932914-33933010)
chr2 (392-439)||(16494972-16495019)
chr2 (384-459)||(40584436-40584511)
chr2 (344-452)||(5963255-5963362)
chr2 (380-440)||(8032702-8032762)
chr2 (338-382)||(20386747-20386791)
chr2 (431-459)||(5280592-5280620)
chr2 (338-366)||(11825351-11825379)
[»] scaffold0062 (1 HSPs)
scaffold0062 (338-459)||(44764-44885)
[»] scaffold0565 (1 HSPs)
scaffold0565 (338-435)||(5868-5965)
[»] scaffold0442 (1 HSPs)
scaffold0442 (342-459)||(10092-10209)
[»] scaffold0009 (1 HSPs)
scaffold0009 (342-459)||(157841-157958)
[»] scaffold0018 (1 HSPs)
scaffold0018 (344-459)||(154908-155022)
[»] scaffold0010 (1 HSPs)
scaffold0010 (338-451)||(160912-161025)
[»] scaffold0774 (1 HSPs)
scaffold0774 (378-459)||(3461-3542)
[»] scaffold0132 (2 HSPs)
scaffold0132 (338-459)||(1059-1180)
scaffold0132 (338-459)||(9019-9140)
[»] scaffold0111 (1 HSPs)
scaffold0111 (378-459)||(40226-40307)
[»] scaffold1786 (1 HSPs)
scaffold1786 (394-459)||(894-959)
[»] scaffold0012 (1 HSPs)
scaffold0012 (380-459)||(160297-160376)
[»] scaffold0073 (1 HSPs)
scaffold0073 (339-376)||(17934-17971)
[»] scaffold0005 (1 HSPs)
scaffold0005 (338-444)||(233480-233586)


Alignment Details
Target: chr6 (Bit Score: 111; Significance: 7e-56; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 4831520 - 4831687
Alignment:
Q  134 tgatgaaaactcgcgtcaacattgtatttcaacgaccctggatcaggcctcttccaaatgtcaatgtgtcacgacggtcctgggaagatttcaactcctc 233  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  4831520 tgatgaaaactcgcatcaacattgtatttcaacgaccttggatcaggcctcttccaaatgccaatgtgtcacgacggtcctgggaagatttcaactcgtc 4831619  T
Q  234 ccacttttacggaacgtgttaacacatatttgttgcacaatgagttgacattaaaacttcttggagtact 303  Q
    || ||||| | ||||  |||||||||||||||||||| | ||| |||||||||||| ||| |||||||||    
T  4831620 ccgcttttgctgaac--gttaacacatatttgttgcatattgaattgacattaaaatttcatggagtact 4831687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 21542586 - 21542465
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||    
T  21542586 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 21542487  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  21542486 tggctattggttatggaaaaaa 21542465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 340 - 459
Target Start/End: Original strand, 11082240 - 11082359
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||    
T  11082240 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattg 11082339  T
Q  440 gctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||    
T  11082340 gctattggttatggaaaaaa 11082359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 7274868 - 7274989
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||||||| || |||||| || |||||| || ||||||| ||||||||||||||||    
T  7274868 tcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcat 7274967  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  7274968 tggctattggttatggaaaaaa 7274989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 35129047 - 35129169
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataa-aaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||    
T  35129047 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttca 35129146  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| ||||||||||||||||||    
T  35129147 ttggttattggttatggaaaaaa 35129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 34177634 - 34177755
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| || ||||||||||||||| |||||| |||||  |||||||| |||| ||||||||||||||||    
T  34177634 tcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcat 34177733  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  34177734 tggctattggttatggaaaaaa 34177755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 4032156 - 4032051
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagt---ttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  4032156 tcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatttt 4032057  T
Q  435 cattgg 440  Q
    ||||||    
T  4032056 cattgg 4032051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 3095719 - 3095833
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||||||||||||| ||||| | |||| |  ||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  3095719 ttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttcattggcta 3095817  T
Q  444 ttggttatggaaaaaa 459  Q
    ||| ||||||||||||    
T  3095818 ttgattatggaaaaaa 3095833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 440
Target Start/End: Complemental strand, 16524516 - 16524443
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16524516 tagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16524443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 16013453 - 16013527
Alignment:
Q  366 atagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16013453 atagtttgtaacatagttttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 16013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 440
Target Start/End: Complemental strand, 4988080 - 4988007
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  4988080 tagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattgg 4988007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 15830861 - 15830760
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||| ||| |||||| |||||||||| |||||| |||||||||    
T  15830861 tcacatttattaaaaaaactaaaacataatagtttctaacataattttttgtgttatttttaaaataagtttaataggaagatgtaaaaaaaattttcat 15830762  T
Q  438 tg 439  Q
    ||    
T  15830761 tg 15830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 12461422 - 12461543
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagtttt-ataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||||||||||| | | |||| || |||||||||| | || ||||||||| ||||||| |||| ||||| |||||||||||||||    
T  12461422 tcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttca 12461520  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||||| ||||    
T  12461521 ttggctattggttatggagaaaa 12461543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 5822026 - 5822123
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    ||||||||||||||||||||||||| || ||||||||||  ||| ||| |||||||||||||| || |||||| |||| ||||| |||||||||||||    
T  5822026 ttcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 30794191 - 30794306
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||| |||| | |||| |  ||| |||||| |||| | |||| || ||||||||||||||||| |||||||| |||||||||||||    
T  30794191 ttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggcta 30794290  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||| ||||| ||||    
T  30794291 ttggtgatggagaaaa 30794306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 16870785 - 16870892
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||||||||||||| |||||| ||| |  |||||||||||||||||| ||| |||||| |||| ||||| ||||| ||| ||| ||    
T  16870785 tcacacttattaaaaaaactaaaacatagtagtttataatactgttttttgtgttatctttaaaataagtttcatagaaagatttaaaatcaacttttat 16870884  T
Q  438 tggctatt 445  Q
    ||| ||||    
T  16870885 tggttatt 16870892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 3888564 - 3888494
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||||||||    
T  3888564 tagttcgtaacatagttatttgtgttatatttgaaataagttttataggaagatgtagaaacaattttcat 3888494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 16655355 - 16655254
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||| |||||| ||||||| |||||| ||| ||||||| |||||||||||||  || |||||| |||| ||||  ||||| |||||||||    
T  16655355 ttcacacttattaaaaaaacttaaacatagtagtttataatatagtttattgtgttatctttagaataagtttcatagaaagagttaaaatcaattttca 16655256  T
Q  437 tt 438  Q
    ||    
T  16655255 tt 16655254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 5300604 - 5300701
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||  ||||||||| || |||| ||||||||           |||||||||||||||| ||||||||||||||||    
T  5300604 tcacacttattaaaaaaactaaaacataggagtttgtaatattgtttcttgtgtta-----------agttttataggaagatgtaaaaacaattttcat 5300692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 4831080 - 4831140
Alignment:
Q  17 aacaaccatgaaaatattgatggcaacaacgcgggaagtagtgactatatgcaatcggaat 77  Q
    |||||| ||||||||||||||||||| || | ||||| ||||||||||||||||| |||||    
T  4831080 aacaacaatgaaaatattgatggcaagaatgtgggaattagtgactatatgcaattggaat 4831140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 21964122 - 21964000
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||| ||| |||||||||||||| || || |  | ||| ||||||||||| || || ||| ||||||||| | ||||| |||||| |||||| |    
T  21964122 ttcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataagttttatggaaagatgtaaaaataattttta 21964023  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| ||||| | ||||| ||||    
T  21964022 ttggttattgatcatggagaaaa 21964000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 31107318 - 31107237
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||||||||||  |||||| ||| || ||||||  ||||| |||| |||||| |||| |||||||    
T  31107318 atagttttttgtgttttctttgaaaaaaaatttataagaaaatgtaaaaatgatttttattgactattgattatagaaaaaa 31107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 445
Target Start/End: Original strand, 5881745 - 5881852
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||| ||||||||||| |||||| || |||||||| |  ||| ||| || ||||||||||| |  |||||| |||| ||||| ||||||||||||| |    
T  5881745 ttcacatttattaagaaa-ctaaaatattatagtttgcagtataatttcttctgttatctttggactaagtttcatagaaagatgtaaaaacaattttaa 5881843  T
Q  437 ttggctatt 445  Q
    |||| ||||    
T  5881844 ttggttatt 5881852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 376
Target Start/End: Original strand, 7163732 - 7163771
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaa 376  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  7163732 ttcatacttattaagaaaactaaaacataataatttgtaa 7163771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 17751737 - 17751858
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||| |||| | |||| |  ||||||||||||||| |||||  |  ||||||| |   || || |||||||| |  ||||    
T  17751737 tcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctcat 17751836  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  17751837 tggctattgattatggagaaaa 17751858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 46760249 - 46760370
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  46760249 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 46760348  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  46760349 tggctattggttatggaaaaaa 46760370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 6191213 - 6191092
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  6191213 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcat 6191114  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||    
T  6191113 tggctattggttatggagaaaa 6191092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 18102698 - 18102577
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  18102698 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 18102599  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  18102598 tggccattggttatggaaaaaa 18102577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 45486123 - 45486002
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||||    
T  45486123 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcat 45486024  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  45486023 tggctattggttatggaaaaaa 45486002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 14806037 - 14805917
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||    
T  14806037 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttgaaaaa-gttttataggaagatgtaaaaacaattttcat 14805939  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  14805938 tggctattggttatggaaaaaa 14805917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 15253031 - 15252911
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||    
T  15253031 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttgaaaaa-gttttataggaagatgtaaaaacaattttcat 15252933  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  15252932 tggctattggttatggaaaaaa 15252911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 22632257 - 22632136
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||| ||||||||| |||||| || ||||||| ||||||||||||||||    
T  22632257 tcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcat 22632158  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| ||||||||||||||||||    
T  22632157 tggatattggttatggaaaaaa 22632136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 25737619 - 25737740
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | ||||    |||||||| |||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  25737619 tcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 25737718  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  25737719 tggctattggttatggaaaaaa 25737740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 35923419 - 35923299
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||| ||||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  35923419 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttt-gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 35923321  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  35923320 tggctattggttatggaaaaaa 35923299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 35887961 - 35888061
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  35887961 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttcat 35888060  T
Q  438 t 438  Q
    |    
T  35888061 t 35888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 19912761 - 19912882
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||| || || ||||||||||||||||    
T  19912761 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcat 19912860  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| ||||||||||||||||||    
T  19912861 tggttattggttatggaaaaaa 19912882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 340 - 459
Target Start/End: Complemental strand, 25944742 - 25944623
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||||||| |||| | |||| |  |||  |||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  25944742 acacttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 25944643  T
Q  440 gctattggttatggaaaaaa 459  Q
    || |||||||||||||||||    
T  25944642 gccattggttatggaaaaaa 25944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 12632336 - 12632457
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||| |||||||||| | |||| |  |||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  12632336 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcat 12632435  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||||||||| | |||||||||    
T  12632436 tggctattggctgtggaaaaaa 12632457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 47779772 - 47779651
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||  || |||||| || ||||||| ||||||||||||||||    
T  47779772 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcat 47779673  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| | |||||||||||||||    
T  47779672 tggcaactggttatggaaaaaa 47779651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 10248698 - 10248594
Alignment:
Q  338 tcacacttattaagaaaactaaaacataa-tagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttc 435  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||| ||||||||||| ||||| ||||||||||||||    
T  10248698 tcacatttattaagaaaactaaaacattagtagtttgtaacatagttttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattttc 10248599  T
Q  436 attgg 440  Q
    |||||    
T  10248598 attgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 438
Target Start/End: Complemental strand, 39170696 - 39170602
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||||| ||||| ||| |||||||||||||||||| |||||||||| |||||| |||||||||| |||||| |||||||||||||||||    
T  39170696 ttattaagaaaattaaaatatagtagtttgtaacatagtttattgtgttatccttgaaataagttttatacgaagatgtaaaaacaattttcatt 39170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 4910627 - 4910746
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||| | ||||||||||||||| | |||| |  |||  |||||||||| |||||  |||||||||||||||||||| |||||| |||||||||    
T  4910627 tcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcat 4910724  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||||||||    
T  4910725 tggctattgattatggaaaaaa 4910746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 357 - 459
Target Start/End: Original strand, 20123691 - 20123793
Alignment:
Q  357 taaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaa 456  Q
    |||||||||| | |||| |  ||||||||||||||  |||||| |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatggaaa 20123790  T
Q  457 aaa 459  Q
    |||    
T  20123791 aaa 20123793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 3778144 - 3778045
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||| |||||| || ||||  ||||| ||||||||| |||||||||||    
T  3778144 acacttattaagaaaaccaaaacatagtagtttgcaacatagtttattgtgttatccttgaaataatttttccaggaaaatataaaaataattttcattg 3778045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 38260484 - 38260377
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||| ||||||||  |||||||||| |||||||||||||||||  |||||| ||||||||||| ||| | |||||| |||||||||    
T  38260484 tcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttcat 38260385  T
Q  438 tggctatt 445  Q
    ||| ||||    
T  38260384 tggttatt 38260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 382 - 451
Target Start/End: Original strand, 35068885 - 35068954
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat 35068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 31768991 - 31769055
Alignment:
Q  375 aacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  31768991 aacatagttttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattttcattg 31769055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 452
Target Start/End: Complemental strand, 16917639 - 16917525
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| || |||   |||||| || |||||| || |||||| || ||||||| ||||||||||||||||    
T  16917639 tcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 16917540  T
Q  438 tggctattggttatg 452  Q
    |  ||||||||||||    
T  16917539 taactattggttatg 16917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 437
Target Start/End: Original strand, 37767010 - 37767110
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||| ||||||||||||||||||||| ||| |||| |  ||||||||||||||| ||||| |||  | ||| || |||| ||||||||||||||||||    
T  37767010 ttcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttctttaaaactaatttcatgggaacatataaaaacaattttca 37767109  T
Q  437 t 437  Q
    |    
T  37767110 t 37767110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 9158195 - 9158137
Alignment:
Q  400 aaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaa 458  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||| |||||    
T  9158195 aaaaaagttttataggaagatgtaaaaacaattttctttggccattggttatgaaaaaa 9158137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 33153203 - 33153081
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||| ||||| |||||||||||||||| |  ||| ||||||||||| |  |||||| || |||||| | ||||| ||||||||||| | |    
T  33153203 ttcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaataaattttatggaaagatgtaaaaacaattctta 33153104  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| || || ||||||| ||||    
T  33153103 ttggttaatgattatggagaaaa 33153081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 14574730 - 14574618
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||| |||| |||| | |||| |  ||||||||||||||| ||||   || |||||| || ||||||| |||||| ||||| |||||    
T  14574730 acacttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattg 14574631  T
Q  440 gctattggttatg 452  Q
     ||||||||||||    
T  14574630 tctattggttatg 14574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 445
Target Start/End: Complemental strand, 29713358 - 29713250
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||| |||||||||||||||| |||| || |||||||  ||||||| |||||| ||||||  || || ||| |||| ||| | |||||||||||||||    
T  29713358 ttcacatttattaagaaaactaagacatcattgtttgtagtatagtttcttgtgtcatctttagaataactttcatagaaagttgtaaaaacaattttca 29713259  T
Q  437 ttggctatt 445  Q
    |||| ||||    
T  29713258 ttggatatt 29713250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 47557631 - 47557714
Alignment:
Q  378 atagttttttgtgttatctttg--aaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| | |||   ||||||  ||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  47557631 atagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctattaattatggaaaaaa 47557714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 4069109 - 4069050
Alignment:
Q  400 aaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||| ||||    
T  4069109 aaaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatggagaaaa 4069050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 22369385 - 22369327
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatc 395  Q
    ||||||||||||||||||||||||| ||  |||||||||  ||||||||||||||||||    
T  22369385 ttcacacttattaagaaaactaaaatattgtagtttgtagtatagttttttgtgttatc 22369327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 459
Target Start/End: Original strand, 31549936 - 31550016
Alignment:
Q  379 tagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||| ||| |||||  || || |||||||||||||| ||||||||| |||||||| | ||||||||||| |||||    
T  31549936 tagttttttgcgttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgggaaaaa 31550016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 440
Target Start/End: Complemental strand, 40560543 - 40560443
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||| |||||||| || ||||| ||||    ||| ||||||||||| || |||||| ||||||||||| ||||| |||||| |||| ||||||    
T  40560543 acacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattg 40560444  T
Q  440 g 440  Q
    |    
T  40560443 g 40560443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 454
Target Start/End: Complemental strand, 44683037 - 44682929
Alignment:
Q  346 attaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctatt 445  Q
    ||||||||||||| || |||| | |||| |  ||| | ||||||||| | |||| || |||||| ||  |||||| |||||||||||||||||| |||||    
T  44683037 attaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcattgactatt 44682938  T
Q  446 ggttatgga 454  Q
    |||||||||    
T  44682937 ggttatgga 44682929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 35084051 - 35084173
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||| |||||||||||||||| | || ||||    ||||||||||||||| |  |||||| |||||| |||  ||||| ||||||||||| | |    
T  35084051 ttcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttgaaataagtttcataaaaagatgtaaaaacaattctta 35084150  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| || || ||||||| ||||    
T  35084151 ttggataatgattatggagaaaa 35084173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 376
Target Start/End: Complemental strand, 7041688 - 7041651
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaa 376  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  7041688 cacacttattaagaaaactaaaacatagtagtttgtaa 7041651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 459
Target Start/End: Original strand, 2610630 - 2610681
Alignment:
Q  408 tttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||||||| ||||    
T  2610630 tttatagaaagatgtaaaaacatttttctttggctattggttatggagaaaa 2610681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 24151640 - 24151687
Alignment:
Q  404 aagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||||||||||| ||||||||||||||| ||  ||||||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttat 24151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 48413820 - 48413765
Alignment:
Q  404 aagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||  ||||||  ||||||||||||||||| |||||||||||||| ||||    
T  48413820 aagttttatgagaagatgcaaaaacaattttcattgactattggttatggagaaaa 48413765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 8015732 - 8015786
Alignment:
Q  405 agttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||| |||| |||||||    
T  8015732 agttttataagaagatgtaaaaacaatttttattggttattgattatagaaaaaa 8015786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 452
Target Start/End: Complemental strand, 15995886 - 15995773
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagtttttt-gtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    ||||||||||||||||| |||| |||| | |||| |  |||||||||| ||||| ||||   || |||||| || | ||||| |||||| ||||| ||||    
T  15995886 acacttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccatt 15995787  T
Q  439 ggctattggttatg 452  Q
    || |||||||||||    
T  15995786 ggttattggttatg 15995773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 454
Target Start/End: Original strand, 29236019 - 29236135
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||| |||||||||| | ||||||| |||||||    ||| |||||||| || | |||| || |||||| |||| || |||||||||||||||| |    
T  29236019 ttcacactcattaagaaaa-tgaaacatagtagtttgaggtataattttttgtattctttttggaataagtttcatagaaatatataaaaacaattttta 29236117  T
Q  437 ttggctattggttatgga 454  Q
    |||| || || |||||||    
T  29236118 ttggttaatgattatgga 29236135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 30082515 - 30082479
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttg 373  Q
    |||||||||||||||||||| |||||||| |||||||    
T  30082515 ttcacacttattaagaaaacaaaaacatagtagtttg 30082479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 33092658 - 33092726
Alignment:
Q  366 atagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    ||||||||||  ||||||| |||||||||| || ||| |||||| |||| || || |||||||||||||    
T  33092658 atagtttgtattatagtttcttgtgttatcattaaaataagtttcatagaaaaatgtaaaaacaatttt 33092726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 440
Target Start/End: Complemental strand, 48879549 - 48879449
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||||| || ||||  ||||    ||| |||||||| || || ||| || ||||||||||| ||||| |||||| |||| ||||||    
T  48879549 acacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattg 48879450  T
Q  440 g 440  Q
    |    
T  48879449 g 48879449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 7022397 - 7022518
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  7022397 tcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcat 7022496  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  7022497 tggctattggttatggaaaaaa 7022518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 26483698 - 26483577
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  26483698 tcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 26483599  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||||||||    
T  26483598 tggctattgattatggaaaaaa 26483577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 34890168 - 34890289
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  34890168 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 34890267  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  34890268 tggctattggttatggaaaaaa 34890289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 36190938 - 36190817
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||| |||||||||||||||||||| | |||  |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  36190938 tcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 36190839  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  36190838 tggctattggttatggaaaaaa 36190817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 339 - 440
Target Start/End: Original strand, 41362302 - 41362403
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T
Q  439 gg 440  Q
    ||    
T  41362402 gg 41362403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 17713389 - 17713268
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||||||||||||| || |||| |||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  17713389 tcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcat 17713290  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| |||||||||| |||||||    
T  17713289 tggttattggttattgaaaaaa 17713268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 43216341 - 43216462
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  43216341 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 43216440  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |  |||||||||||||| ||||    
T  43216441 tcactattggttatggagaaaa 43216462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 17336908 - 17336806
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||| || |||||||||||||| ||||||||||||||||    
T  17336908 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcat 17336809  T
Q  438 tgg 440  Q
    |||    
T  17336808 tgg 17336806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 13143939 - 13144060
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaa-aagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  13143939 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttca 13144038  T
Q  437 ttggctattggttatggaaaaa 458  Q
    || | |||||||||||||||||    
T  13144039 ttagttattggttatggaaaaa 13144060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 7858694 - 7858573
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  7858694 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcat 7858595  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || | |||| ||||||||||||    
T  7858594 tgaccattgattatggaaaaaa 7858573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 31734241 - 31734160
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31734241 atagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatggaaaaaa 31734160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 344 - 459
Target Start/End: Complemental strand, 8745743 - 8745628
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||||||  |||||| ||||||||||||||||| ||||||||||||||||||| |     
T  8745743 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttgaaataagttttataggaagatgtaaaaacaattttcattggttg 8745644  T
Q  444 ttggttatggaaaaaa 459  Q
    ||| |||| |||||||    
T  8745643 ttgattatagaaaaaa 8745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 2628157 - 2628271
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||| || ||| ||||||||||||||||| |||||| ||||||||    
T  2628157 ttcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttca 2628256  T
Q  437 ttggctattggttat 451  Q
    |||| ||||| ||||    
T  2628257 ttggttattgcttat 2628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 30575828 - 30575950
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaag-ttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||| |  | ||||||||||||| ||||| ||||||| ||||| ||||| || |||||||||||||||    
T  30575828 tcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttca 30575927  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||||||    
T  30575928 ttggctattggttatggaaaaaa 30575950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 38072329 - 38072227
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||  || || ||||||||||||||||    
T  38072329 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcat 38072230  T
Q  438 tgg 440  Q
    |||    
T  38072229 tgg 38072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 440
Target Start/End: Complemental strand, 8673550 - 8673445
Alignment:
Q  340 acacttattaagaaaactaaaacata-----atagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||    
T  8673550 acacttattaagaaaactaaaacatactgtaatagtttgtaacatagttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaatttt 8673451  T
Q  435 cattgg 440  Q
    ||||||    
T  8673450 cattgg 8673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 41086386 - 41086501
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||  |||| | |||| |  ||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  41086386 ttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggcta 41086485  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||| ||||||||||    
T  41086486 ttggtaatggaaaaaa 41086501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 339 - 459
Target Start/End: Complemental strand, 24893006 - 24892883
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataa---aaacaattttc 435  Q
    ||||||||||||||||||| |||||||| | |||  |  ||||||||||||||| |||||| |||| ||||||||||| |||||||   |||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  436 attggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||||    
T  24892906 attggctattggttatggaaaaaa 24892883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 29920262 - 29920383
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  | | |||||||||||||||||| || |||||| || ||||||| ||||||||||||||||    
T  29920262 tcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcat 29920361  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  29920362 tggctattgattatggacaaaa 29920383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 4038876 - 4038975
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||||| |||||| ||||||||||||||||    
T  4038876 tcacacttattaaaaaaattaaaacatagtagtttgtaacatagtttt-tgtgttatttttgaaataagttttatatgaagatgtaaaaacaattttcat 4038974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 8712038 - 8711922
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||    |||| |  ||||||||||||||| | |||| |||||||||||||||||||| |||||| |||||||||    
T  8712038 tcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttcat 8711944  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  8711943 tggctattggttatggaaaaaa 8711922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 339 - 459
Target Start/End: Original strand, 28497133 - 28497253
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||| ||||||||||||  |||| ||| ||||||| |||||||||| |||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  28497133 cacatttattaagaaaataaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatgggaagatgtaaaaacaattttcatt 28497232  T
Q  439 ggctattggttatggaaaaaa 459  Q
       |||||||||| |||||||    
T  28497233 acttattggttattgaaaaaa 28497253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 384 - 459
Target Start/End: Complemental strand, 35525707 - 35525632
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  35525707 ttttgtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttatggaaaaaa 35525632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 342 - 440
Target Start/End: Complemental strand, 17314992 - 17314894
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| || ||| ||| ||| || ||||| |||||||||||||    
T  17314992 acttattaagaaaactaaaacatagtagtttgtaacatagctttttgtgtcatctttgaaataaatttcatacgaaaatgtaaaagcaattttcattgg 17314894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 34158284 - 34158406
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaa-aagttttataggaagatataaaaacaattttca 436  Q
    ||||| |||||||||||| |||||||||| | | || |  ||||||| ||||||| ||||| |||| ||||||||||||||||| |||||||||||||||    
T  34158284 tcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttca 34158383  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||| |||||||||||| ||||||    
T  34158384 ttgactattggttatgaaaaaaa 34158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 15957945 - 15958026
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||| ||||||| |||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||    
T  15957945 atagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttatggaaaaaa 15958026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 458
Target Start/End: Complemental strand, 28348774 - 28348656
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||| ||||| |||||  ||||||||| | |||| |  ||||| |||||| || |||||| ||||||||||||||||| || |||||||||||| |||||    
T  28348774 acacatattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattg 28348675  T
Q  440 gctattggttatggaaaaa 458  Q
    |||||||||||||||||||    
T  28348674 gctattggttatggaaaaa 28348656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 16358106 - 16358226
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||| |||| | |||| |  |||||||||| |||| ||||||||||| |||| |||||||||| ||||| ||||||||||    
T  16358106 tcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttctttgaaaaa-gtttcataggaagatgtaaaatcaattttcat 16358204  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||| ||||| ||||||    
T  16358205 tgactattgattatgaaaaaaa 16358226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 35456014 - 35456139
Alignment:
Q  338 tcacacttattaagaaaacta-----aaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatt 432  Q
    |||||||||||||||||||||     |||||||| | |||| |  |||||||||| |||| | |||||||| |||||||||| ||||| |||||||||||    
T  35456014 tcacacttattaagaaaactagtgtaaaacataagaatttgaagtatagttttttatgttttttttgaaaa-agttttatagaaagatgtaaaaacaatt 35456112  T
Q  433 ttcattggctattggttatggaaaaaa 459  Q
    |||||||||||||  ||||||||||||    
T  35456113 ttcattggctattaattatggaaaaaa 35456139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 5217557 - 5217445
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||| |||||| ||||| | | | |||||| |||||||||| |||||| |||||| |||| ||||| ||||||||||||| ||    
T  5217557 tcacacttattaagaaaactataacatagtagtt-gcagcgtagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 5217459  T
Q  438 tggctattggttat 451  Q
    ||| |||| |||||    
T  5217458 tggttattagttat 5217445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 13143886 - 13143809
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||| || ||||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||| |||||    
T  13143886 ttttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgggaaaaa 13143809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 352 - 451
Target Start/End: Complemental strand, 27819811 - 27819712
Alignment:
Q  352 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| |  ||| ||||||||||  ||||| |||||||| |||| ||||  ||||||||||    
T  27819811 aaaactaaaacataatagtttgtaacatagtttcttgtattatcctacaaataagttttatataaagatgtaaaaacattttttattgattattggttat 27819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 4046887 - 4047009
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttt-tgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||| ||||  |||| | |||||| |||||||||| |||||| |||||  || |||||| || | || || |||||| ||||||||    
T  4046887 tcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttctttataataagtttcatggaaatatgtaaaaataattttca 4046986  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||| |||||||||||||||||    
T  4046987 ttggcaattggttatggaaaaaa 4047009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 8709780 - 8709901
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||| ||| ||||||||||||||| | |||| |  ||||||||||||||| ||||||||| |||| | || ||||||  |||||||| |||||||    
T  8709780 tcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcat 8709879  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || ||||  |||||||| ||||    
T  8709880 tgactatatgttatggagaaaa 8709901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 8107656 - 8107728
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatgga 454  Q
    |||||||| || |||||||||||||||||| |  | ||| |||||||||||||||||||||||||||||||||    
T  8107656 ttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcattggctattggttatgga 8107728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 440
Target Start/End: Original strand, 25195085 - 25195142
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  25195085 ttttttgtgttatctttgaaataa-ttttataggaagatgtaaaaacaattttcattgg 25195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 445
Target Start/End: Complemental strand, 6401784 - 6401679
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||| |||||| ||| || ||||||  |||||||||||||||||  |||||| ||||||  ||  ||||| |||||||||||| |||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgttattcttgaaataagtttcctaaaaagatgtaaaaacaatttccattg 6401685  T
Q  440 gctatt 445  Q
    | ||||    
T  6401684 gttatt 6401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 8712690 - 8712577
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||||||||| ||  ||| |   |||||| |||||||||  ||| || ||||||||||| ||||| ||||||||||||| ||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  438 tggctattggttat 451  Q
    ||| |||| |||||    
T  8712590 tggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 26954442 - 26954499
Alignment:
Q  394 tctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  26954442 tctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 26954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 7499816 - 7499772
Alignment:
Q  415 gaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  7499816 gaagatgtaaaaacaattttcattggctattggttatggaaaaaa 7499772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 446
Target Start/End: Complemental strand, 34900090 - 34899983
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt-atctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||||| ||||  | ||| |||||||||||  |||| | || ||||||||||||| ||| |||||| |||||| ||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttag-aataagttttataggaggatttaaaaataattttgat 34899992  T
Q  438 tggctattg 446  Q
    ||| |||||    
T  34899991 tggttattg 34899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 2052938 - 2052891
Alignment:
Q  400 aaaaaagttttataggaagatataaaaacaattttcattggctattgg 447  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2052938 aaaaaagttttatgggaagatgtaaaaacaattttcattggctattgg 2052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 29147236 - 29147331
Alignment:
Q  343 cttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||| || ||||| ||| |||||||||||||| ||| ||||||||||  | ||| |||||| ||| ||||||  ||||||||||||||||    
T  29147236 cttattaagagaattaaaatatagtagtttgtaacataatttcttgtgttatccataaaataagtttaataagaagatggaaaaacaattttcatt 29147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 420
Target Start/End: Complemental strand, 2053029 - 2052947
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagat 420  Q
    ||||||||||||||||||||||||||||||| || | |  ||| ||||||||||| |||||  || ||||||||| |||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttatgggaagat 2052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 4480901 - 4480841
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||| |||||| ||||||||||    
T  4480901 ataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattttcatt 4480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 3642039 - 3642084
Alignment:
Q  413 aggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatggaaaaaa 3642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 398
Target Start/End: Original strand, 14574973 - 14575031
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatcttt 398  Q
    |||||||||||||||||| ||||||| || |||| |||||||| | |||||||||||||    
T  14574973 acacttattaagaaaactgaaacatactaatttgcaacatagtgtcttgtgttatcttt 14575031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 14693484 - 14693434
Alignment:
Q  389 tgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||| || ||||||| |||||| ||||||||||||||||||    
T  14693484 tgttatctttgaaataaattttataagaagatgtaaaaacaattttcattg 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 16879400 - 16879501
Alignment:
Q  352 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    |||||||||| |||| | |||| |  ||| ||||||||||| ||||||||| || ||| || |||| || ||||||||||||| |||| |||||| ||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  452 gg 453  Q
    ||    
T  16879500 gg 16879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 432
Target Start/End: Original strand, 15824641 - 15824725
Alignment:
Q  348 taagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatt 432  Q
    ||||||||||||||||||| | |||| |  ||||||||||||||| |||||  || |||||| || | ||||| |||||||||||    
T  15824641 taagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaatt 15824725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 45190750 - 45190700
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttg 388  Q
    |||||||| |||||||||||||||||||| | |||| | ||||||||||||    
T  45190750 tcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 2238588 - 2238624
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttg 373  Q
    |||||||||||||||||||| |||||||| |||||||    
T  2238588 ttcacacttattaagaaaacaaaaacatagtagtttg 2238624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 11158723 - 11158675
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtg 390  Q
    ||||||||||||||||||||||||| | |||| || ||| |||||||||    
T  11158723 acttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 12108319 - 12108251
Alignment:
Q  341 cacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttt 409  Q
    ||||||||||||||||||| |  || || |||| |  ||| ||||||||||||||||||||| ||||||    
T  12108319 cacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaataagttt 12108251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 7654783 - 7654662
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  7654783 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcat 7654684  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||||||||    
T  7654683 tggctattgattatggaaaaaa 7654662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 20281757 - 20281636
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  20281757 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20281658  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  20281657 tggctattggttatggaaaaaa 20281636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 47868045 - 47867924
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  47868045 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 47867946  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  47867945 tggctattggttatggaaaaaa 47867924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 2229413 - 2229292
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||    
T  2229413 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 2229314  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  2229313 tggctattggttatggaaaaaa 2229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 4058881 - 4058760
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4058881 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 4058782  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| ||||||||||||||||||    
T  4058781 tggttattggttatggaaaaaa 4058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 26916491 - 26916370
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  26916491 tcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 26916392  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  26916391 tggctattggttatggaaaaaa 26916370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 10069863 - 10069743
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||| | ||||||  |||||||||||| || |||| |||||||||||||||| ||||| ||||||||||||||||    
T  10069863 tcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcat 10069764  T
Q  438 tggctattggttatggaaaaa 458  Q
    |||||||||||||||||||||    
T  10069763 tggctattggttatggaaaaa 10069743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 14332926 - 14332805
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| || || |||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||    
T  14332926 tcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 14332827  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||| ||||||    
T  14332826 tggccattggttatgaaaaaaa 14332805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 5064641 - 5064741
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  5064641 tcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttcat 5064740  T
Q  438 t 438  Q
    |    
T  5064741 t 5064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 343 - 459
Target Start/End: Original strand, 16604837 - 16604953
Alignment:
Q  343 cttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggct 442  Q
    |||||||||||||||||||||||| | |||  |  ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  16604837 cttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggct 16604936  T
Q  443 attggttatggaaaaaa 459  Q
    ||| |||||||||||||    
T  16604937 attagttatggaaaaaa 16604953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 41414597 - 41414717
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | | || |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  41414597 tcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 41414696  T
Q  438 tggctattggttatggaaaaa 458  Q
    ||||||||| ||||| |||||    
T  41414697 tggctattgattatgaaaaaa 41414717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 28142608 - 28142710
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||    
T  28142608 tcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttcat 28142707  T
Q  438 tgg 440  Q
    |||    
T  28142708 tgg 28142710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 29203672 - 29203551
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| |||||| |||   |||||||||||||| ||||||||||||||||    
T  29203672 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcat 29203573  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  29203572 tggctattggttatggaaaaaa 29203551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 39078322 - 39078202
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||| |||||| ||||||||||||||||    
T  39078322 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata-gaagatgtaaaaacaattttcat 39078224  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||||||| ||||| |||||||    
T  39078223 tggctattagttattgaaaaaa 39078202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 346 - 451
Target Start/End: Original strand, 46070517 - 46070621
Alignment:
Q  346 attaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctatt 445  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| | ||    
T  46070517 attaagaaaactaaaacatagtagtttgtaacatagttttt-gtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgtt 46070615  T
Q  446 ggttat 451  Q
    ||||||    
T  46070616 ggttat 46070621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 35310734 - 35310849
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||| |||||  || |||||| || | ||||| ||||||||||||||||||||||    
T  35310734 ttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggcta 35310833  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||||||||||||||    
T  35310834 ttggttatggaaaaaa 35310849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 20716346 - 20716225
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||| |||||  || | |||| |||||||||||||| ||||| ||||||||||||||||    
T  20716346 tcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcat 20716247  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  20716246 tggctattggttatggaaaaaa 20716225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 32410494 - 32410393
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||| |||||| |||||| ||| | ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  32410494 tcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32410395  T
Q  438 tg 439  Q
    ||    
T  32410394 tg 32410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 55580836 - 55580715
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||| |||||||| | |||| |  |||||||||| |||| |||||| |||||||| ||||||||||| ||||||||||||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||||||| |||||||||||||    
T  55580736 tggctattagttatggaaaaaa 55580715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 17794527 - 17794647
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||| | || | |||| |  ||||||||||| ||| ||||||||| || |||||||||||||| ||||||||||||||||    
T  17794527 tcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcat 17794626  T
Q  438 tggctattggttatggaaaaa 458  Q
    ||||||||| |||||||||||    
T  17794627 tggctattgattatggaaaaa 17794647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 339 - 459
Target Start/End: Complemental strand, 42915695 - 42915575
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||||| |||||||||| |||| | |||||| |||||||||||||||| |||||| || |||||| || | ||||| |||||||||||||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  439 ggctattggttatggaaaaaa 459  Q
    ||| |||||||||||||||||    
T  42915595 ggcaattggttatggaaaaaa 42915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 351 - 451
Target Start/End: Original strand, 47516190 - 47516290
Alignment:
Q  351 gaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggtta 450  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| | |||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggtta 47516289  T
Q  451 t 451  Q
    |    
T  47516290 t 47516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 8013075 - 8013182
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| |||||| |||| ||||| ||||||||||||| ||    
T  8013075 tcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 8013174  T
Q  438 tggctatt 445  Q
    ||| ||||    
T  8013175 tggttatt 8013182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 37912050 - 37911948
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||| | | |||||| ||||||||||||||||||||||||| ||| ||||||||||| || || ||||||||||||||||    
T  37912050 tcacacttattaagaaaactaaaatacagtagtttataacatagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcat 37911951  T
Q  438 tgg 440  Q
    |||    
T  37911950 tgg 37911948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 5483264 - 5483385
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||| |||||||||||||||||||| | |||| |  ||| ||||||||||| ||||| ||| |||||| |||||||||| ||||||||||||||||    
T  5483264 tcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcat 5483363  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||||| |||||||||| ||||    
T  5483364 tggctactggttatggagaaaa 5483385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 28318408 - 28318505
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||    
T  28318408 tcacacttattaacaaaactaaaacata---gtttgtaacatagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcat 28318502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 339 - 459
Target Start/End: Original strand, 5841766 - 5841886
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||| ||||| | ||||||||| |||| ||||||| |||||||||| |||||||||| |||||| || |||||||||||||| |||||| ||||||||||    
T  5841766 cacatttatttataaaactaaagcatagtagtttgcaacatagtttcttgtgttatccttgaaataaattttataggaagatgtaaaaataattttcatt 5841865  T
Q  439 ggctattggttatggaaaaaa 459  Q
    || |||||||||| |||||||    
T  5841866 ggttattggttattgaaaaaa 5841886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 53848626 - 53848518
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||| |||||| || |||||||||||||  ||||||||||||| ||    
T  53848626 tcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaat 53848527  T
Q  438 tggctattg 446  Q
    ||| |||||    
T  53848526 tggttattg 53848518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 340 - 459
Target Start/End: Original strand, 56318058 - 56318177
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||| |||| |||||||||| | |||  |  || |||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||     
T  56318058 acacttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcatta 56318157  T
Q  440 gctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||    
T  56318158 gctattggttatggaaaaaa 56318177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 48793616 - 48793735
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||  ||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  48793616 tcacacttattaagaaaactaaagcataagaatttgtagcatagtttt--gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 48793713  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||| ||||||    
T  48793714 tggcaattggttatgaaaaaaa 48793735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 8683292 - 8683413
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || | || || |||||| |||||||||    
T  8683292 tcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcat 8683391  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  8683392 tggcaattggttatggaaaaaa 8683413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 24940531 - 24940410
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||| ||| | |||| |  |||||||||||| || |||||| ||||||||||||| |||||| |||||||||||||| |    
T  24940531 tcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgt 24940432  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| ||||||||||||| ||||    
T  24940431 tggttattggttatggagaaaa 24940410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 28668987 - 28669107
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||||||||||||||| |||||  |||| |||||||||||| || ||||||||||||||||    
T  28668987 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcat 28669086  T
Q  438 tggctattggttatggaaaaa 458  Q
    ||| |||| |||||| |||||    
T  28669087 tggttattagttatgaaaaaa 28669107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 357 - 451
Target Start/End: Original strand, 8178244 - 8178338
Alignment:
Q  357 taaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||| |||||| ||||||||||||  ||||| ||||||||||    
T  8178244 taaaacatagtagtttgtaacatagtttcatgtgttatctttgaaataagttttataagaagatgtaaaaacaatttgtattggttattggttat 8178338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 370 - 439
Target Start/End: Complemental strand, 29511559 - 29511490
Alignment:
Q  370 tttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  29511559 tttgtaacatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 369 - 440
Target Start/End: Complemental strand, 49080392 - 49080321
Alignment:
Q  369 gtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  49080392 gtttgtaacataattttttgtcttatctttgaaataagttttataggaagatgtaaaaacaattttcattgg 49080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 420
Target Start/End: Complemental strand, 16473912 - 16473832
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagat 420  Q
    |||||||||||||||||||||| |||| | |||| |  ||||||||||||||| |||||||||||||||||||||||||||    
T  16473912 acacttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagat 16473832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 32203379 - 32203277
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||| ||||| ||||||||||||||| | |||  |  ||||||||||||  | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  32203379 tcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcat 32203280  T
Q  438 tgg 440  Q
    |||    
T  32203279 tgg 32203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 21722668 - 21722776
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||| | |||  |  ||||| |||| |||| |||||| || ||||||||||||||||| |||||| |||||||||    
T  21722668 tcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcat 21722767  T
Q  438 tggctattg 446  Q
    || ||||||    
T  21722768 tgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 40411812 - 40411752
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaa 402  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  40411812 acttattaagaaaactaaaacatagtagtttgtaatatagttttttgtgttatttttgaaa 40411752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 5815595 - 5815514
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||||||| |||||||||  |||||| |||||| |||||| |||| |||||| ||||||||||||    
T  5815595 atagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatggaaaaaa 5815514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 17186822 - 17186902
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||||| || |||||||||    |||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  17186822 atagttttttgtattttctttgaaattt-ttttataggaagatgtaaaaataagtttcattggctattggttatggaaaaaa 17186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 1585335 - 1585454
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||| ||||||||| |||||||||| | |||| |  ||| ||||  ||||| ||||||||| |||||| || | ||||| | ||||||||||| ||    
T  1585335 tcacacttgttaagaaaagtaaaacataagattttggagtataatttt--gtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttat 1585432  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  1585433 tggctattgattatggagaaaa 1585454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 416
Target Start/End: Complemental strand, 36542974 - 36542894
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagt---ttgtaacatagttttttgtgttatctttgaaaaaagttttatagga 416  Q
    |||| |||||||||||| ||||||||| ||||   ||| |||| |||||||||||||||| |||||| |||||||||||||    
T  36542974 cacagttattaagaaaagtaaaacatactagtagtttgcaacaaagttttttgtgttatccttgaaataagttttatagga 36542894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 452
Target Start/End: Complemental strand, 19352018 - 19351899
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagt-ttgtaacatagtttttt---gtgttatctttgaaaaaagttttataggaagatat-aaaaacaatt 432  Q
    ||||||||||||||||||||||||||||| |   ||| |  ||||||||||   ||||| || |||||| |||||| || ||||||| | ||||||||||    
T  19352018 tcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttttgtgtgttttcattgaaataagtttcatgggaagatgttaaaaacaatt 19351919  T
Q  433 ttcattggctattggttatg 452  Q
    ||||||||||||| ||||||    
T  19351918 ttcattggctattagttatg 19351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 17799126 - 17799241
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||| || ||| |||| |  ||| ||| | ||||| |  ||| ||  |||||||| ||||||| ||||||||||||||||||| ||    
T  17799126 ttattaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattggtta 17799225  T
Q  444 ttggttatggaaaaaa 459  Q
    || |||||||| ||||    
T  17799226 tttgttatggagaaaa 17799241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 35529760 - 35529717
Alignment:
Q  416 aagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatggaaaaaa 35529717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 12002619 - 12002673
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt 392  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||||||||||||    
T  12002619 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 12002673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 32323291 - 32323349
Alignment:
Q  381 gttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||| ||||| ||| ||| ||||| ||||||| ||||||||||||||||||    
T  32323291 gttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattg 32323349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 50145854 - 50145781
Alignment:
Q  385 tttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||| |||||| || ||||||||| ||||||| |||| |||||||||||||||||||| | ||||| ||||    
T  50145854 tttgtgtt-tctttggaataagttttatgggaagatgtaaacacaattttcattggctattgataatggagaaaa 50145781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 454
Target Start/End: Complemental strand, 40553929 - 40553819
Alignment:
Q  348 taagaaaactaaaacataatagtttgtaacatag----ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||| ||||||| |  ||||    ||| |||||||||| ||  || |||||| |||| ||||| ||||||||| ||||||||| ||    
T  40553929 taagaaaactaaaacatagtagtttgcagtatagtttctttcttgtgttatccttagaataagtttcatagaaagatgtaaaaacaagtttcattggtta 40553830  T
Q  444 ttggttatgga 454  Q
    || ||||||||    
T  40553829 ttagttatgga 40553819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 459
Target Start/End: Complemental strand, 25268600 - 25268524
Alignment:
Q  383 tttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||| |  |||||| |||||| | | ||||| ||||||| |||||||||||| ||||||||||||| ||||    
T  25268600 tttttgtgttctacttgaaataagtttcacaagaagaaataaaaataattttcattggttattggttatggagaaaa 25268524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 14583895 - 14583789
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtg-ttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| |||||||||||||||||| |||| | |||   | |||||| |||||| || ||||| ||| |||||| || ||||||| ||||||| |||||||    
T  14583895 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaac-attttca 14583797  T
Q  437 ttggctat 444  Q
    ||||||||    
T  14583796 ttggctat 14583789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Original strand, 25297286 - 25297329
Alignment:
Q  416 aagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||    
T  25297286 aagatgtaaaaacaattttcattggctattgattatggagaaaa 25297329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 440
Target Start/End: Original strand, 23978169 - 23978203
Alignment:
Q  406 gttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||| |||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattgg 23978203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 17236262 - 17236331
Alignment:
Q  345 tattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttatag 414  Q
    |||||||||||||||||||||||||||||    ||| ||||||||||| |  |||||| |||||| ||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttcttcttgaaataagtttcatag 17236331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 50080442 - 50080558
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||| ||||||||||| |||||   | ||     || |||| |||||||| ||||||| ||    
T  50080442 tcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttttgtataa-----atgggaaaatataaaaccaatttttat 50080536  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  50080537 tggctattgattatggataaaa 50080558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 7438808 - 7438760
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt 392  Q
    ||||||||||||||||||||||||| |||| |  ||||||||| |||||    
T  7438808 ttattaagaaaactaaaacataataatttggagtatagtttttggtgtt 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 23978134 - 23978170
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgt 374  Q
    |||||||||||||||||||||||||||| || |||||    
T  23978134 tcacacttattaagaaaactaaaacatagtattttgt 23978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 24965258 - 24965333
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttatag 414  Q
    ||||| ||||||| |||||||||||||  |||||  ||| ||| |||| |||||||||||||||| || ||||||||    
T  24965258 tcacatttattaa-aaaactaaaacatggtagttcataatataattttctgtgttatctttgaaataaattttatag 24965333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 422 - 458
Target Start/End: Original strand, 52535655 - 52535691
Alignment:
Q  422 taaaaacaattttcattggctattggttatggaaaaa 458  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  52535655 taaaaataattttcattggctattggttatagaaaaa 52535691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 2126206 - 2126085
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| || ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  2126206 tcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 2126107  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  2126106 tggctattggttatggaaaaaa 2126085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 15959633 - 15959754
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  15959633 tcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 15959732  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  15959733 tggctattggttatggaaaaaa 15959754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 24190637 - 24190516
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||| | |||| ||||||||||||||||    
T  24190637 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcat 24190538  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  24190537 tggctattggttatggaaaaaa 24190516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 32623998 - 32624119
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |   |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  32623998 tcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 32624097  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  32624098 tggccattggttatggaaaaaa 32624119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 39555579 - 39555700
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  |||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  39555579 tcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcat 39555678  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  39555679 tggctattggttatggaaaaaa 39555700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 7397874 - 7397772
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  7397874 tcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcat 7397775  T
Q  438 tgg 440  Q
    |||    
T  7397774 tgg 7397772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 45840059 - 45840160
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||  |||||||||||||||    
T  45840059 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagat-gaaaaacaattttcat 45840157  T
Q  438 tgg 440  Q
    |||    
T  45840158 tgg 45840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 50176690 - 50176588
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| ||    
T  50176690 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttat 50176591  T
Q  438 tgg 440  Q
    |||    
T  50176590 tgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 6787006 - 6786885
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||| | | |||| |  ||||||||||||||| |||||| ||||||||||||| |||||| |||| |||||||||||    
T  6787006 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcat 6786907  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  6786906 tggctattggttatggaaaaaa 6786885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 11241195 - 11241074
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||| |||||||||| | |||| |  ||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||    
T  11241195 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcat 11241096  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  11241095 tggctattggttatggaaaaaa 11241074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 33369718 - 33369598
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||| | |||| ||||||||||||||||    
T  33369718 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatg-agatgtaaaaacaattttcat 33369620  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  33369619 tggctattggttatggaaaaaa 33369598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 45226306 - 45226185
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||||| |||  |  |||||||| ||| || ||||||||||||||||||||||||||  ||||||||||||||||    
T  45226306 tcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 45226207  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||||||||    
T  45226206 tgactattggttatggaaaaaa 45226185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 5950611 - 5950486
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataat---agtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattt 433  Q
    ||||||||||||||||||||||||||||| |   |||||| |||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  5950611 ttcacacttattaagaaaactaaaacatactcgtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaattt 5950512  T
Q  434 tcattggctattggttatggaaaaaa 459  Q
    |||||||  ||||||||| |||||||    
T  5950511 tcattggtcattggttattgaaaaaa 5950486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 30701378 - 30701480
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||| |||||||||    
T  30701378 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttcat 30701477  T
Q  438 tgg 440  Q
    |||    
T  30701478 tgg 30701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 16688304 - 16688191
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  16688304 tcacacttattagaaaaattaaaacatagtagtttgtaacatagttttttatgttatttttgaaataagttttataggaagatgtaaaaacaattttcat 16688205  T
Q  438 tggctattggttat 451  Q
    ||| | ||||||||    
T  16688204 tggttgttggttat 16688191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 28016739 - 28016852
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  28016739 tcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcat 28016838  T
Q  438 tggctattggttat 451  Q
    ||||||||||||||    
T  28016839 tggctattggttat 28016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 44148829 - 44148950
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||| |||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  44148829 tcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 44148928  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  44148929 tggcaattggttatggaaaaaa 44148950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 459
Target Start/End: Complemental strand, 6785622 - 6785503
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||||||||||||||||||||| | || | |  ||||||||||||||| |||||  ||||||||||||| |||||| |||||||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaattgg-agtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  439 ggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||||    
T  6785523 ggctattggttatggaaaaaa 6785503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 42965813 - 42965928
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    ||||||||||||||||||||||||| | |||| |   |||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  42965813 acttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggc 42965911  T
Q  442 tattggttatggaaaaa 458  Q
    |||||||||||||||||    
T  42965912 tattggttatggaaaaa 42965928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 25185300 - 25185399
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||    
T  25185300 acttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattgg 25185399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 340 - 451
Target Start/End: Original strand, 35366198 - 35366309
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||| || |||||||| ||||| ||||||||||||| ||||    
T  35366198 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattg 35366297  T
Q  440 gctattggttat 451  Q
    | ||||||||||    
T  35366298 gttattggttat 35366309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 3076463 - 3076342
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||| ||||| | |||||| |||||||||||||||| | |||| || ||||||||| ||||||| |||||| |||||||||    
T  3076463 tcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcat 3076364  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  3076363 tggcaattggttatggaaaaaa 3076342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 12449000 - 12449081
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  12449000 atagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccattggttatggaaaaaa 12449081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 33431727 - 33431614
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||| | ||||| | |||||| |||||||||||||||| | ||| ||||||||||||||||| |||  |||||||||||||||    
T  33431727 tcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcat 33431628  T
Q  438 tggctattggttat 451  Q
    ||||||||||||||    
T  33431627 tggctattggttat 33431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 35691560 - 35691440
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||| ||||||||||| | |||| |  ||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||    
T  35691560 tcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttat 35691462  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  35691461 tggctattggttatggaaaaaa 35691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 37538977 - 37538864
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||| ||| ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| |||| |||||||||||    
T  37538977 tcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcat 37538878  T
Q  438 tggctattggttat 451  Q
    ||| | ||||||||    
T  37538877 tggttgttggttat 37538864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 5858393 - 5858477
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5858393 tagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatataaaaacaattttcattggctattggttat 5858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 340 - 459
Target Start/End: Original strand, 46818497 - 46818616
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||  ||||||||| | |||  |  |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  46818497 acacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattg 46818596  T
Q  440 gctattggttatggaaaaaa 459  Q
    |||| | |||||||| ||||    
T  46818597 gctaatagttatggagaaaa 46818616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 24728619 - 24728741
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||| |||||  || |||||| || ||||||| |||||||||||||||    
T  24728619 tcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttca 24728718  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||| |||| ||||||||||||    
T  24728719 ttggcaattgattatggaaaaaa 24728741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 13136547 - 13136667
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  ||||||||||||||| ||||| ||||||  || |||||||||| |||||||||||| |||    
T  13136547 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaatttccat 13136645  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  13136646 tggctattggttatggaaaaaa 13136667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 32983165 - 32983284
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | || | |  ||||||||||||||| |||||| |||| |||||||| |||||| ||||||||||||||||    
T  32983165 tcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttcat 32983263  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  32983264 tggc-attggttatggaaaaaa 32983284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 40718846 - 40718725
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||| ||||||||||| |||| | |||| |  ||||||||||||||| |||||||||||||||||||| |||| | || |||||||||||||    
T  40718846 tcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcat 40718747  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||| || |||||||    
T  40718746 tggctattggtaatagaaaaaa 40718725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 43667296 - 43667417
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||| ||| |||||| | |||  |  ||| ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  43667296 tcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 43667395  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  43667396 tggccattggttatggaaaaaa 43667417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 44510212 - 44510313
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| || |||||||||||| | ||||||||||||||||    
T  44510212 tcacacttcttaagaaaactaaaatatagtagtttataacatagttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcat 44510311  T
Q  438 tg 439  Q
    ||    
T  44510312 tg 44510313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 420
Target Start/End: Complemental strand, 13352262 - 13352180
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagat 420  Q
    |||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  13352262 tcacacatattaagaaaactaaaacatagtagtttgttacataattttttgtgttatctttgaaataagttttataggaagat 13352180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 339 - 459
Target Start/End: Original strand, 47014487 - 47014605
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||| |||| |||||||||||||| | | || |   |||||||||||||| || ||||||||||||||||||||| || |||||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggag--tagttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  439 ggctattggttatggaaaaaa 459  Q
    | |||||||||||||||||||    
T  47014585 gactattggttatggaaaaaa 47014605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 459
Target Start/End: Complemental strand, 46543144 - 46543029
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||| ||||||||||||||| | |||| |  ||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||| |||||||||    
T  46543144 ttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggcta 46543045  T
Q  444 ttggttatggaaaaaa 459  Q
    |||||| |||| ||||    
T  46543044 ttggttgtggagaaaa 46543029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 41063910 - 41063796
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaag-ttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||  || ||| ||| |||||||| ||||| |||||| ||||||||    
T  41063910 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttattcttaaaataagcttttatagaaagatgtaaaaataattttca 41063811  T
Q  437 ttggctattggttat 451  Q
    |||| |||| |||||    
T  41063810 ttggttatttgttat 41063796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 46803667 - 46803760
Alignment:
Q  341 cacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||| || |||||| |||| ||||| |||||||||||||    
T  46803667 cacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaatttt 46803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 52985101 - 52984980
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||| |||||| | |||| |  ||||||||||||||| |||||| || |||||| |  ||||||| ||||||||||||||||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcat 52985002  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||| ||| ||||    
T  52985001 tggctattgattagggataaaa 52984980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 446
Target Start/End: Original strand, 8889719 - 8889798
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattg 446  Q
    |||||||||| ||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  8889719 tagtttgtaatatagtttattgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttattg 8889798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 446
Target Start/End: Original strand, 7467958 - 7468064
Alignment:
Q  341 cacttattaagaaaactaaaacataatagtttgtaaca-tagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||||||||||| | |||| |  | || ||||||||||| |||||| ||||||||||| |||||||| |||| |||||||||||||    
T  7467958 cacttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattg 7468057  T
Q  440 gctattg 446  Q
    |||||||    
T  7468058 gctattg 7468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 30221894 - 30221772
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||| |||||||||| |||||||||| |  ||| || ||| ||||||||||| ||||| ||| ||||||||| ||||||| |||||||| |||| |    
T  30221894 ttcacactaattaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacatttttta 30221795  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| ||||||||||||| ||||    
T  30221794 ttggatattggttatggagaaaa 30221772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 39932576 - 39932686
Alignment:
Q  349 aagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggt 448  Q
    |||||||||||||||||| | |||| |  ||||||||||||||| | |||  || |||||||||| |||||||||||||||||||| |||||||||||||    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  449 tatggaaaaaa 459  Q
     ||||| ||||    
T  39932676 catggagaaaa 39932686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 52841437 - 52841551
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||| |||||||||||||||||||| |||||||||||  ||||||| |||| ||||| || ||| |||||| |||| ||||| | |||||||||||||    
T  52841437 ttcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttca 52841536  T
Q  437 ttggctattggttat 451  Q
    |||| |||| |||||    
T  52841537 ttggttattagttat 52841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 349 - 459
Target Start/End: Original strand, 3861699 - 3861809
Alignment:
Q  349 aagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggt 448  Q
    |||||||||||||||||||| |||| |  ||| |||||| |||| |||||  || ||||||||| | ||||| ||||||||||||||||||||||||| |    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  449 tatggaaaaaa 459  Q
    |||| ||||||    
T  3861799 tatgaaaaaaa 3861809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 459
Target Start/End: Complemental strand, 1820578 - 1820462
Alignment:
Q  343 cttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    |||||||||||||||||||||||| | |||| || |||||||| ||||| | | |||| |||||||||||||||||||| |||||| ||| |||||| ||    
T  1820578 cttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaa-aatattcattagc 1820480  T
Q  442 tattggttatggaaaaaa 459  Q
    | ||||||||| ||||||    
T  1820479 ttttggttatgaaaaaaa 1820462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 28120748 - 28120869
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||| | |||| | | || |  ||||||||||||||| | ||| |||  | |||||| ||||||| ||||||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||||||||    
T  28120848 tggctattgattatggaaaaaa 28120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 32742195 - 32742316
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||| ||||| | |||  |  ||||||||||||||| ||||| ||||||||||||||  || |||||||||||||||||||    
T  32742195 tcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcat 32742294  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |    |||| ||||||||||||    
T  32742295 taatcattgattatggaaaaaa 32742316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 15912336 - 15912265
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||| |||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  15912336 tagtttgtaacatagtttcttgt-ttatccttgaaataagttttataggaagatgtaaaaacaattttcattg 15912265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 2246047 - 2246114
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctatt 445  Q
    ||||||||||||||| ||||||||| |||||||||||||| || |||||| |||||||||||||||||    
T  2246047 atagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctatt 2246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 47600094 - 47600153
Alignment:
Q  400 aaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  47600094 aaaaaagttttataggaagatgtaaaaacaattttcattggctattgtttatgaaaaaaa 47600153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 458
Target Start/End: Complemental strand, 50370071 - 50370009
Alignment:
Q  396 tttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaa 458  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||    
T  50370071 tttgaaaaaagttttataggaagatgtaaaaacaatttctattggctattggttatgaaaaaa 50370009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 3875012 - 3875135
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  ||||||||  ||||| | |||  ||||||||||||||||| || ||||||||||||| ||    
T  3875012 tcacacttattaagaaaagtaaaacataagaatttgaagtatagtttt--gtgtttttttttgaaaaagttttataggaatatgtaaaaacaatttttat 3875109  T
Q  438 tggc----tattggttatggaaaaaa 459  Q
    ||||    ||||||||||||||||||    
T  3875110 tggctatatattggttatggaaaaaa 3875135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 16854250 - 16854187
Alignment:
Q  396 tttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||||||| ||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatggagaaaa 16854187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 43359796 - 43359737
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaa 403  Q
    |||||||||||||||||| ||| |||||||||||||||||| || |||||||||||||||    
T  43359796 ttattaagaaaactaaaatatagtagtttgtaacatagtttcttatgttatctttgaaaa 43359737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 413
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttata 413  Q
    ||||||||||||||||||||||| |||| | |||| |  |||||||||||| || ||||||||||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 6787050 - 6787104
Alignment:
Q  405 agttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatggaaaaaa 6787104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 10558796 - 10558870
Alignment:
Q  385 tttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||| |||||| || || |||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  10558796 tttgtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatggagaaaa 10558870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 440
Target Start/End: Complemental strand, 16661651 - 16661582
Alignment:
Q  370 tttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||    
T  16661651 tttgtaacatatttttttgtgttatctttgaaataag-tttataggaggatgtaaaaacaatttttattgg 16661582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 36384093 - 36383987
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||  |||||||| ||| ||||  | ||| ||||||||||||| |||| || || ||| || | ||||||||||||||||| |||    
T  36384093 ttcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttatttttggaataaatttcatggaaagatataaaaacaattatca 36383994  T
Q  437 ttggcta 443  Q
    |||||||    
T  36383993 ttggcta 36383987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 451
Target Start/End: Original strand, 51840488 - 51840601
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||| |||||| ||  |||||||||  ||   || |||||||||||||| || |||||| |||| ||||||||||| |||||||||    
T  51840488 ttcacacttattaagaaa-ctaaaatattgtagtttgtagtatgacttcttgtgttatctttggaataagtttcatagaaagatataaaatcaattttca 51840586  T
Q  437 ttggctattggttat 451  Q
    |||| |||| |||||    
T  51840587 ttggttattagttat 51840601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 450
Target Start/End: Complemental strand, 1035023 - 1034913
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||| |||||||||| | ||||   | || | ||||||||| |||||| || |||||||||  |||||||||||||||||||||||    
T  1035023 tcacatttattaagaaaattaaaacataagaatttgg--cgtattgttttgtgttttctttggaataagttttatgagaagatataaaaacaattttcat 1034926  T
Q  438 tggctattggtta 450  Q
     | ||||||||||    
T  1034925 cgactattggtta 1034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 7875933 - 7876056
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagtttt--ataggaagatataaaaacaattttc 435  Q
    |||||||||||||||||| ||||| |||| | |||| |  ||||||||||||||| ||||||||     ||||  |||| ||||| |||||| ||||||     
T  7875933 tcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttgaatttttttttttatagaaagatgtaaaaataattttt 7876032  T
Q  436 attggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||||    
T  7876033 attgactattggttatggaaaaaa 7876056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 459
Target Start/End: Original strand, 32318619 - 32318674
Alignment:
Q  404 aagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  32318619 aagttttattggaagatgtaaaaacaattttcattggttattggttatggagaaaa 32318674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 452
Target Start/End: Complemental strand, 43765418 - 43765348
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatg 452  Q
    ||||||||||| |||||  || ||||||||||||||||| |||||||| |||||||||| |||| ||||||    
T  43765418 ttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatg 43765348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 23392215 - 23392280
Alignment:
Q  394 tctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||| || ||||||||||| || ||||||||| ||||||||||| |||||||||||||| ||||    
T  23392215 tctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatggagaaaa 23392280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 37735416 - 37735497
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||||| || |||||| || |||||| || ||||||  ||||||||||||| ||||||||||| ||||||| ||||    
T  37735416 atagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatggagaaaa 37735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 13351786 - 13351746
Alignment:
Q  400 aaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13351786 aaaaaagttttataggaagatgtaaaaacaattttcattgg 13351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 6304791 - 6304828
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaa 376  Q
    |||||||||||||||||||||||||||||| |||||||    
T  6304791 cacacttattaagaaaactaaaacataataatttgtaa 6304828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 451
Target Start/End: Complemental strand, 13291949 - 13291844
Alignment:
Q  346 attaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctatt 445  Q
    |||||||||||||||| | | |||||||||| || |||| |||||||||| ||| || |||||| |||| |||||  || |||||||| |||| | ||||    
T  13291949 attaagaaaactaaaatacagtagtttgtaatattgtttcttgtgttatccttggaataagtttcatagaaagatgcaagaacaatttgcatttgttatt 13291850  T
Q  446 ggttat 451  Q
     |||||    
T  13291849 agttat 13291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 51338938 - 51339003
Alignment:
Q  386 ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||| ||||||||| |||||| |||| ||||| ||||| ||||||||||||| |||| |||||    
T  51338938 ttgtgttgtctttgaaataagtttcatagaaagatgtaaaatcaattttcattggttattagttat 51339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 454
Target Start/End: Complemental strand, 25391805 - 25391734
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatgga 454  Q
    ||||||||||| ||||| | | |||||||||| ||| || |||||||||||||||||||||| | ||||||||    
T  25391805 ttttttgtgttttcttt-agataagttttatatgaaaatgtaaaaacaattttcattggctaatagttatgga 25391734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 439
Target Start/End: Complemental strand, 35942006 - 35941904
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||| || ||||  ||||    ||| ||||||||| | || |||||| ||||||||| | ||||| ||| || ||||||||    
T  35942006 ttcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaataagttttatggaaagatgtaataataattttca 35941907  T
Q  437 ttg 439  Q
    |||    
T  35941906 ttg 35941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 459
Target Start/End: Complemental strand, 14087030 - 14086997
Alignment:
Q  426 aacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||| |||||||||||||    
T  14087030 aacaattttcattggctattagttatggaaaaaa 14086997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 566 - 687
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  566 tcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 665  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  666 tggctattggttatggaaaaaa 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 20644182 - 20644061
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  20644182 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20644083  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  20644082 tggctattggttatggaaaaaa 20644061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 34425497 - 34425378
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  439 ggctattggttatggaaaaa 458  Q
    |||||||| |||||||||||    
T  34425397 ggctattgattatggaaaaa 34425378  T

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Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 6686553 - 6686431
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttg-aaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  6686553 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttca 6686454  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||||||    
T  6686453 ttggctattggttatggaaaaaa 6686431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 42273815 - 42273694
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||| |||||| ||||||||||||||||    
T  42273815 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 42273716  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||    
T  42273715 tggctattggttatggagaaaa 42273694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 43589955 - 43590076
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||||||||    
T  43589955 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcat 43590054  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  43590055 tggctattggttatggaaaaaa 43590076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 11261877 - 11261998
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||| ||||||| |||| | | |||| |  ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  11261877 tcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11261976  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  11261977 tggctattggttatggaaaaaa 11261998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 12912292 - 12912408
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    |||||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||     
T  12912292 acttattaagaaaactaaaacatagtagttgg-aatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggt 12912390  T
Q  442 tattggttatggaaaaaa 459  Q
    |||||||| | |||||||    
T  12912391 tattggttgttgaaaaaa 12912408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 344 - 459
Target Start/End: Complemental strand, 19413303 - 19413188
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||  |||| | |||||| |||||||||||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||||| |    
T  19413303 ttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggcaa 19413204  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||||||||||||||    
T  19413203 ttggttatggaaaaaa 19413188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 20039271 - 20039149
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| |    
T  20039271 ttcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaattttta 20039172  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||| ||||||    
T  20039171 ttggctattggttatgaaaaaaa 20039149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 5736233 - 5736333
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||| | ||||||||||||||||    
T  5736233 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttcat 5736332  T
Q  438 t 438  Q
    |    
T  5736333 t 5736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 352 - 440
Target Start/End: Original strand, 16153353 - 16153440
Alignment:
Q  352 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattgg 16153440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 348 - 459
Target Start/End: Original strand, 37522592 - 37522703
Alignment:
Q  348 taagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattgg 447  Q
    ||||||||||||||||||| | |||| |  ||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  448 ttatggaaaaaa 459  Q
    ||||||||||||    
T  37522692 ttatggaaaaaa 37522703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 37562754 - 37562876
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatcttt-gaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| | ||| | |||||||||||||||||||| |||||||||||||||    
T  37562754 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttca 37562853  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    || ||||||| ||||||||||||    
T  37562854 ttagctattgtttatggaaaaaa 37562876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 25841032 - 25840911
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  25841032 tcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25840933  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || | |||| ||||||||||||    
T  25840932 tgacaattgtttatggaaaaaa 25840911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 3463816 - 3463910
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  3463816 ttattaagaaaactaaaacatac-agtttgtaacatagtttt-tgtgttatctttgaaataagttttataggaagatataaaaacaatttttattgg 3463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 340 - 440
Target Start/End: Complemental strand, 8506597 - 8506497
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| || ||||||| |||||| ||||||||||| ||||| ||||||||||||||||||    
T  8506597 acacttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattg 8506498  T
Q  440 g 440  Q
    |    
T  8506497 g 8506497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 347 - 440
Target Start/End: Original strand, 1144493 - 1144586
Alignment:
Q  347 ttaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| || ||||||||||| || |||||||||||||||||||    
T  1144493 ttaagaaaactaaaccatagtagtttgtaacatagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattgg 1144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 29307185 - 29307282
Alignment:
Q  343 cttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||| |||||| ||||||||||||    
T  29307185 cttattaagaaaactaaaatatagtagtttgtaacgtagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 38130113 - 38130230
Alignment:
Q  345 tattaagaaaactaaaacataatagtttgtaacatagt---tttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    |||||||||||||||||||||| | |||| || |||||   |||||||||| |||||  ||||||||||||||||| || |||||| |||||||||||||    
T  38130113 tattaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggc 38130212  T
Q  442 tattggttatggaaaaaa 459  Q
    ||||||||||||||||||    
T  38130213 tattggttatggaaaaaa 38130230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 367 - 451
Target Start/End: Original strand, 5369053 - 5369137
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  5369053 tagtttgtaacatagttttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattttcattggttgttggttat 5369137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 30703765 - 30703656
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    ||||||||| |||||||||||||| ||||||  |||||| ||||||||||||||||||||| || |||||||||||||| || ||| || |||||||||     
T  30703765 acttattaacaaaactaaaacatagtagtttacaacataattttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggt 30703666  T
Q  442 tattggttat 451  Q
    ||||| ||||    
T  30703665 tattgattat 30703656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 32111124 - 32111051
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaa 457  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  32111124 ttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatggaaaa 32111051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 8959779 - 8959707
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8959779 tagtttgtaatttagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 8959707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 4463526 - 4463407
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| ||| ||| |  ||||| |||||| || ||| || || ||||||| |||||||||||||||     
T  4463526 tcacacttattaagaaaactaaagcataagaatttgtagcatggttgt--gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttcac 4463429  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  4463428 tggctattggttatggaaaaaa 4463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 450
Target Start/End: Original strand, 43454318 - 43454428
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||||||||||||| |||||||||| |  ||| || ||||||||||||||| ||||||  | |||||||||||||| || |||||||||||||||||     
T  43454318 acacttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcattt 43454417  T
Q  440 gctattggtta 450  Q
     ||||||||||    
T  43454418 actattggtta 43454428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 39505225 - 39505346
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||| |||| ||||  |||| | |||||| ||||||||| ||||||| |||||| || ||||||||| | ||||| |||||||||||||||    
T  39505225 tcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttca 39505324  T
Q  437 ttggctattggttatggaaaaa 458  Q
    ||||| ||| ||||||||||||    
T  39505325 ttggcaattcgttatggaaaaa 39505346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 459
Target Start/End: Complemental strand, 38280969 - 38280894
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||| | |||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  38280969 ttttgtgctttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatggaaaaaa 38280894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 350 - 458
Target Start/End: Original strand, 41625517 - 41625624
Alignment:
Q  350 agaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggtt 449  Q
    ||||||||||||||||| | |||  || ||||||||||||||| ||||||||| |||||| |||||||||| ||||||  ||||||||| ||||||| ||    
T  41625517 agaaaactaaaacataagaattta-aatatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  450 atggaaaaa 458  Q
    ||| |||||    
T  41625616 atgaaaaaa 41625624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 18718748 - 18718645
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||| ||||| ||| |||||| ||| ||||||| |||||||||| |||||| |||||||||||  |||| ||||| ||||||| |    
T  18718748 ttcactcttattaagaaaattaaaatatagtagtttataatatagtttattgtgttatccttgaaataagttttatagatagatgtaaaagcaattttaa 18718649  T
Q  437 ttgg 440  Q
    ||||    
T  18718648 ttgg 18718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 439
Target Start/End: Complemental strand, 32432414 - 32432319
Alignment:
Q  345 tattaagaaaactaaaacataa-tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    |||||| ||||||||||||||| |||||| ||||||||||| || ||||||| |||||| ||||||||||  ||||| |||||| |||||||||||    
T  32432414 tattaaaaaaactaaaacataagtagtttataacatagtttcttatgttatccttgaaataagttttatataaagatgtaaaaataattttcattg 32432319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 8225590 - 8225508
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatat-aaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||||| || |||||| ||||||||||||||||| || | ||||| || ||||||||||||||||||||||||||||    
T  8225590 atagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatggaaaaaa 8225508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 5984141 - 5984214
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||||||||| |||||| || ||||||||||| || || |||||||||||||||||| |||||||||||    
T  5984141 atagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttat 5984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 23233579 - 23233458
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||| ||||| ||||||||||| | ||||    ||||||||||||||| |||||||||| |  |||||||||| || |||||||| |||| ||    
T  23233579 tcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttat 23233480  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |  |||||||||||||| ||||    
T  23233479 taactattggttatggagaaaa 23233458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 32017808 - 32017751
Alignment:
Q  401 aaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaa 458  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32017808 aaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatggaaaaa 32017751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 396 - 459
Target Start/End: Original strand, 104265 - 104328
Alignment:
Q  396 tttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| ||||||    
T  104265 tttgaaaaaagttttatagaaagatgtaaaaacaattttcattagctattagttatgaaaaaaa 104328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 440
Target Start/End: Complemental strand, 28907204 - 28907135
Alignment:
Q  370 tttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||    
T  28907204 tttgtaacatatttttttgtgttatctttgaaataag-tttataggaggatgtaaaaacaatttttattgg 28907135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 440
Target Start/End: Complemental strand, 28943599 - 28943530
Alignment:
Q  370 tttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||| |||||    
T  28943599 tttgtaacatatttttttgtgttatctttgaaataag-tttataggaggatgtaaaaacaatttttattgg 28943530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 437
Target Start/End: Complemental strand, 32079670 - 32079573
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||| ||| |||| |  |||||||||| |||| || ||||||  ||||| || | ||||| ||||||||||||||||    
T  32079670 acacttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcat 32079573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 459
Target Start/End: Original strand, 42104287 - 42104362
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||| |||||| || |||||| || ||||||| ||||||||||||||||||||||||  ||||||| ||||    
T  42104287 ttttgtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctattaattatggagaaaa 42104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 24439739 - 24439617
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||| |||  |||||||| ||| ||||  | ||| |||||||||||||  ||| || |||||| || | ||||| ||||||||||| |||    
T  24439739 ttcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatca 24439640  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||||| |  ||||||||||||    
T  24439639 ttggctaattattatggaaaaaa 24439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 12792779 - 12792890
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||| |  ||| |  ||||||||||||||| |||||         ||||||||||||  |||| |||||||||||    
T  12792779 tcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttcttt---------tttataggaagag-taaagacaattttcat 12792868  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||    
T  12792869 tggctattggttatggagaaaa 12792890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 17351556 - 17351435
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||| || ||| |  ||| |  |||||||||| | || || ||| || ||||||||| | ||||| ||||||||||||| ||    
T  17351556 tcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaat 17351457  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  17351456 tggctattgattatggagaaaa 17351435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 9957488 - 9957532
Alignment:
Q  414 ggaagatataaaaacaattttcattggctattggttatggaaaaa 458  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||    
T  9957488 ggaagatgtaaaaacaattttcattggctattggttatgaaaaaa 9957532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 10153987 - 10154031
Alignment:
Q  404 aagttttataggaagatataaaaacaattttcattggctattggt 448  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggt 10154031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 451
Target Start/End: Complemental strand, 6391998 - 6391924
Alignment:
Q  377 catagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    ||||||||||||| | |||||||||| |||||| |||| ||||| ||||||||| ||| ||||| |||| |||||    
T  6391998 catagttttttgtatcatctttgaaataagtttcatagaaagatgtaaaaacaacttttattggttattagttat 6391924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 12729878 - 12729988
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||| |  ||| |  ||||||||||||||| |||||         ||||||||||||  |||| |||||||||||    
T  12729878 tcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttcttt---------tttataggaagag-taaagacaattttcat 12729966  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||    
T  12729967 tggctattggttatggagaaaa 12729988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 10153937 - 10153981
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttt 384  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||    
T  10153937 acacttattaaaaaaactaaaacatagtagtttgcaacatagttt 10153981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 30893242 - 30893297
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt 392  Q
    |||||||||||||||||||||||||||| ||| |||| |  ||||||| |||||||    
T  30893242 ttcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtt 30893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 36413928 - 36413983
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgtt 392  Q
    |||||||||||||||||||| |||||||| |||||||  | ||| |||||||||||    
T  36413928 ttcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtt 36413983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 3103329 - 3103428
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||| |||||| ||||||  ||| ||| ||||||||||  ||||| |||||| | || || ||  |||||||||||||||||| ||    
T  3103329 ttattaagaaaactaaaa-ataatattttgtagtataatttattgtgttatccatgaaataagtttca-agaaaaatgaaaaaacaattttcattggtta 3103426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 6e-41; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 30189743 - 30189622
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| |||| |||||||||| | |||| |  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  30189743 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 30189644  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  30189643 tggctattggttatggaaaaaa 30189622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 50650989 - 50651110
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| || ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  50650989 tcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcat 50651088  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||| ||||    
T  50651089 tgactattggttatggagaaaa 50651110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 579097 - 579211
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | ||||       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  579097 tcacacttattaagaaaactaaaacataagaatttg-------gttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcat 579189  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  579190 tggctattggttatggaaaaaa 579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 22479009 - 22479108
Alignment:
Q  341 cacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  22479009 cacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattgg 22479108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 10115077 - 10114975
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10115077 tcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10114978  T
Q  438 tgg 440  Q
    |||    
T  10114977 tgg 10114975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 37042369 - 37042490
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||    
T  37042369 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcat 37042468  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||||||||    
T  37042469 tggctattgattatggaaaaaa 37042490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 345 - 440
Target Start/End: Original strand, 22455967 - 22456062
Alignment:
Q  345 tattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  22455967 tattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattgg 22456062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 23311551 - 23311666
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||||||||||||||||||| | |||  |  |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggcta 23311650  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||||||||||||||    
T  23311651 ttggttatggaaaaaa 23311666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 10014435 - 10014333
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10014435 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10014336  T
Q  438 tgg 440  Q
    |||    
T  10014335 tgg 10014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 10252177 - 10252075
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10252177 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10252078  T
Q  438 tgg 440  Q
    |||    
T  10252077 tgg 10252075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 342 - 459
Target Start/End: Original strand, 11054267 - 11054385
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttg-aaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||| |||| | |||| |  ||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  11054267 acttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattgg 11054366  T
Q  441 ctattggttatggaaaaaa 459  Q
    |||||||||||||||||||    
T  11054367 ctattggttatggaaaaaa 11054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 8096970 - 8097083
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| |||||| |||||||||    
T  8096970 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcat 8097069  T
Q  438 tggctattggttat 451  Q
    ||| ||||| ||||    
T  8097070 tggttattgcttat 8097083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 46711610 - 46711730
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||| ||||||||| | |||| |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  46711610 tcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcat 46711709  T
Q  438 tggctattggttatggaaaaa 458  Q
    ||||||||||||||| |||||    
T  46711710 tggctattggttatgaaaaaa 46711730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 7866435 - 7866556
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  |||||||||| | || |||||||||||||||||||| |||||| ||||||||||||||||    
T  7866435 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcat 7866534  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||||||||    
T  7866535 tgactattggttatggaaaaaa 7866556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 25242130 - 25242227
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttc 435  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||  |||||||||||||    
T  25242130 tcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 34195054 - 34194941
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||| |  ||||| ||||||||||||||||| ||||||||||||||||    
T  34195054 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtcttacccatgaaataagttttataggaagatgtaaaaacaattttcat 34194955  T
Q  438 tggctattggttat 451  Q
    ||| ||||||||||    
T  34194954 tggttattggttat 34194941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 23910465 - 23910584
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||  |  |||| |||||||||| |||||| |||||||||||||||||||| |||||| |||||||||    
T  23910465 tcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcat 23910564  T
Q  438 tggctattggttatggaaaa 457  Q
    ||||||||||||||||||||    
T  23910565 tggctattggttatggaaaa 23910584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 36546715 - 36546593
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||||||||||||| | |||  |  |||||||||||| || |||||| ||||||||| |||||||||| ||||| |||||||||    
T  36546715 ttcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttca 36546616  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||||||||||||| |||||||    
T  36546615 ttggctattggttatagaaaaaa 36546593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 36561600 - 36561722
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||||||||||||| | |||  |  |||||||||||| || |||||| ||||||||| |||||||||| ||||| |||||||||    
T  36561600 ttcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttca 36561699  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||||||||||||| |||||||    
T  36561700 ttggctattggttatagaaaaaa 36561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 9264723 - 9264610
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||  | |||  |  ||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  9264723 tcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttcat 9264624  T
Q  438 tggctattggttat 451  Q
    |||||||| |||||    
T  9264623 tggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 14752160 - 14752281
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||| ||||||||||||||||| | |||| |  ||| ||||||||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  14752160 tcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcat 14752259  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||||||||    
T  14752260 tgactattggttatggaaaaaa 14752281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 28875578 - 28875457
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||| ||||| | |||| |  |||||| |||||||| |||||| ||||||||||||| |||||| ||||||||||||||||    
T  28875578 tcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 28875479  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||| ||||    
T  28875478 tggctattggttatggagaaaa 28875457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 35963324 - 35963203
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| | |||| ||||||||||||||||||||  |||||||||||| ||    
T  35963324 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttat 35963225  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||| ||||||||||||| ||||    
T  35963224 tggttattggttatggagaaaa 35963203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 37075128 - 37075011
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    ||||||||| ||||||||||||||| | |||| |  ||| ||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||    
T  37075128 acttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggc 37075029  T
Q  442 tattggttatggaaaaaa 459  Q
    |||||||||| |||||||    
T  37075028 tattggttatagaaaaaa 37075011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 38401550 - 38401444
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacata----gttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattt 433  Q
    |||||||||||||||||||||||||||| ||||||||||||||    |||||||||||||||||||||| |||||||||||| |||| |||||| |||||    
T  38401550 tcacacttattaagaaaactaaaacatagtagtttgtaacatatatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattt 38401451  T
Q  434 tcattgg 440  Q
    |||||||    
T  38401450 tcattgg 38401444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 339 - 436
Target Start/End: Original strand, 47443927 - 47444023
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||| |||||||||||||||    
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttata-gaagatgtaaaaacaattttca 47444023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 21214410 - 21214305
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagt---ttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    |||||||||||||||||| ||||||||| ||||   |||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  21214410 tcacacttattaagaaaattaaaacatagtagtagtttgtaacatagttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaatttt 21214311  T
Q  435 cattgg 440  Q
    ||||||    
T  21214310 cattgg 21214305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 2927462 - 2927340
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttttt-gtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||||||||||||| | |||||| ||||||||||| || || |||||| || ||||||||| ||||||| |||||| ||||||||    
T  2927462 tcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttca 2927363  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||| ||||||    
T  2927362 ttggctattggttatgaaaaaaa 2927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 6438215 - 6438134
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  6438215 atagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatggagaaaa 6438134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 342 - 451
Target Start/End: Original strand, 7886573 - 7886682
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    |||||||||||||||||||||||| |||||||| ||||||||| |||||||||  |||||| || |||||||| ||||| |||||||||||||||||||     
T  7886573 acttattaagaaaactaaaacatagtagtttgtgacatagtttcttgtgttattcttgaaataaattttatagaaagatgtaaaaacaattttcattggt 7886672  T
Q  442 tattggttat 451  Q
    |||| |||||    
T  7886673 tattagttat 7886682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 29235359 - 29235238
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  |||||||||||| || |||||  |||| |||| |||||||||| |||||| |||||||||    
T  29235359 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcat 29235260  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  29235259 tggctattggttatggaaaaaa 29235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 47864363 - 47864242
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||| | | |||| |  |||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||||    
T  47864363 tcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 47864264  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||| ||||| ||||||    
T  47864263 tgactattgattatgaaaaaaa 47864242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 347 - 451
Target Start/End: Original strand, 46918174 - 46918278
Alignment:
Q  347 ttaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattg 446  Q
    |||| |||||||||||||| ||||||  |||||||||| |||||||||| || ||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  46918174 ttaaaaaaactaaaacatagtagtttacaacatagtttcttgtgttatccttaaaataagttttataggaagatctaaaaacaattttcattggttattg 46918273  T
Q  447 gttat 451  Q
    |||||    
T  46918274 gttat 46918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 339 - 459
Target Start/End: Complemental strand, 19464248 - 19464126
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgta--acatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||| ||||||||||||||| | |||| |  | ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||   |||||||||||| |||||    
T  19464148 tttattattggttatgggaaaaa 19464126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 30454687 - 30454789
Alignment:
Q  348 taagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattgg 447  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||| |||||| ||||||||||| ||||| ||||||||||||| ||||| ||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt-attggttattgg 30454785  T
Q  448 ttat 451  Q
    ||||    
T  30454786 ttat 30454789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 41476287 - 41476393
Alignment:
Q  338 tcacacttattaagaaaactaaaa-cataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||||||| ||||| | |||| |  ||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||    
T  41476287 tcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttca 41476386  T
Q  437 ttggcta 443  Q
    |||||||    
T  41476387 ttggcta 41476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 31837091 - 31836970
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| |  ||| |  |||||||||||| || |||||| ||||||||||||||||| ||  |||||||||||||||    
T  31837091 tcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcat 31836992  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || ||||||||| |||| ||||    
T  31836991 tgactattggttgtggagaaaa 31836970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 2994367 - 2994447
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaag 418  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  2994367 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgttatgcttgaaataagttttataggaag 2994447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 458
Target Start/End: Original strand, 54464848 - 54464967
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||| ||||||||||| ||||| ||||||  || |||||||||| |||||||||||||| |    
T  54464848 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaattttcgt 54464946  T
Q  438 tggctattggttatggaaaaa 458  Q
    |||||||||||||||||||||    
T  54464947 tggctattggttatggaaaaa 54464967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 6075253 - 6075132
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||||||||  |||| | |||| |  ||| ||||||||||| |||||| ||||||| ||| |||||||  ||||||||||||||||    
T  6075253 tcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcat 6075154  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||| ||||||    
T  6075153 tggccattggttatgcaaaaaa 6075132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 53270406 - 53270286
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||| |||||||||| |||| ||||| | |||| |  ||||||||||||||| |||||||||||||||| |||| |||||  ||||| |||||||||    
T  53270406 tcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcat 53270308  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||||||||    
T  53270307 tgcctattggttatggaaaaaa 53270286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 6784461 - 6784390
Alignment:
Q  367 tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||||||| |||||| ||||||||||    
T  6784461 tagtttgtaacatagttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 459
Target Start/End: Original strand, 16032981 - 16033060
Alignment:
Q  380 agttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||    
T  16032981 agtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttattagttattgaaaaaa 16033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 26724942 - 26725064
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||| |||||||||||||||||||| |||| | |||| |  ||| ||||||||||| |||||| || ||||||| |  |||||| |||||||||||||||    
T  26724942 ttcatacttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttca 26725041  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| ||||| ||||||| ||||    
T  26725042 ttggttattgattatggagaaaa 26725064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 50730281 - 50730160
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttttt-gtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||||||||||||| | |||| |  |||||||||| ||| | |||||| |||||||||||||||||||| |||||| ||   |||    
T  50730281 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50730183  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||| |||||||||||||||||||    
T  50730182 ttgactattggttatggaaaaaa 50730160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 50782573 - 50782694
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttttt-gtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| ||||||||||||||||||||||| | |||| |  |||||||||| ||| | |||||| |||||||||||||||||||| |||||| ||   |||    
T  50782573 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50782671  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||| |||||||||||||||||||    
T  50782672 ttgactattggttatggaaaaaa 50782694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 8703277 - 8703160
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttt-tgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||| ||||||||||||||| | |||| |  ||||||||| ||||||   |||| |||||  ||||||||||||| ||||||||| |||||    
T  8703277 tcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtt---tttggaaaaaaatttataggaagatgtaaaaacaa-tttca 8703182  T
Q  437 ttggctattggttatggaaaaa 458  Q
    |||||||||| |||||||||||    
T  8703181 ttggctattgattatggaaaaa 8703160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 9055164 - 9055047
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttt-tgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||| ||||||||||||||| | |||| |  ||||||||| ||||||   |||| |||||  ||||||||||||| ||||||||| |||||    
T  9055164 tcacacttattaaaaaaactaaaacataagaatttggagtatagtttttgtgtgtt---tttggaaaaaaatttataggaagatgtaaaaacaa-tttca 9055069  T
Q  437 ttggctattggttatggaaaaa 458  Q
    |||||||||| |||||||||||    
T  9055068 ttggctattgattatggaaaaa 9055047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 26208186 - 26208079
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||||||||||||||| | | || || |||||| || | ||||| ||||||||||||||||    
T  26208186 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcat 26208087  T
Q  438 tggctatt 445  Q
    ||||||||    
T  26208086 tggctatt 26208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 49584119 - 49584049
Alignment:
Q  341 cacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttat 412  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||    
T  49584119 cacttattaaaaaaactaaaacataatagtttgtaatatag-tttttgtgtcatctttgaaataagttttat 49584049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 344 - 430
Target Start/End: Complemental strand, 17587865 - 17587779
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaa 430  Q
    |||||||||||||||||||||| || |||| || ||||||| || ||||||  |||||| ||||||||||||||||| |||||||||    
T  17587865 ttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttgaaataagttttataggaagatgtaaaaacaa 17587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 404 - 459
Target Start/End: Original strand, 34722623 - 34722678
Alignment:
Q  404 aagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatgcaaaaaa 34722678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 32619828 - 32619898
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatgga 454  Q
    ||||||||| |||||| || | |||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  32619828 ttttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggctattggttatgga 32619898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 54725573 - 54725670
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||  ||||||||| || |||| |||||||           ||||||||||||||||| ||||||||||||||||    
T  54725573 tcacacttattaagaaaactaaaacataggagtttgtaatattgtttcttgtgtt-----------aagttttataggaagatgtaaaaacaattttcat 54725661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 33973518 - 33973627
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||| |||||||||| |||| | |||| |  |||||||| ||||||| ||||| ||||||||||||||| ||||  | |||| ||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttca 33973617  T
Q  437 ttggctattg 446  Q
     |||||||||    
T  33973618 gtggctattg 33973627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 450
Target Start/End: Complemental strand, 3972402 - 3972335
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggtta 450  Q
    ||||||||||| |||||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3972402 ttttttgtgttttctttgaataa-gttttatgggaagatgtaaaaacaattttcattagctattggtta 3972335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 450
Target Start/End: Original strand, 3997476 - 3997543
Alignment:
Q  382 ttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggtta 450  Q
    ||||||||||| |||||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3997476 ttttttgtgttttctttgaataa-gttttatgggaagatgtaaaaacaattttcattagctattggtta 3997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 459
Target Start/End: Complemental strand, 30612344 - 30612222
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||| |||| ||| || |||   | ||| |||||| |||| ||||| |||  ||||| |||| ||||| ||||||||||| |||    
T  30612344 ttcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctctttaaaatgagtttcatagaaagatgtaaaaacaattctca 30612245  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||| || || ||||||||||||    
T  30612244 ttggttaatgattatggaaaaaa 30612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 27875881 - 27875946
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaa 402  Q
    ||||||||| ||||||||||||||||||  |||||||||  ||||||||| |||||||| ||||||    
T  27875881 ttcacacttgttaagaaaactaaaacattgtagtttgtagtatagtttttggtgttatccttgaaa 27875946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 440
Target Start/End: Original strand, 37324037 - 37324141
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagtttt-ataggaagatataaaaacaattttc 435  Q
    ||||||||||||||||||||||| || || |  ||||  | ||| ||||||||||||||||||||| ||||||| || | ||||| |||||| |||| ||    
T  37324037 ttcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatctttgaaataagttttcatggaaagatgtaaaaataattctc 37324136  T
Q  436 attgg 440  Q
    |||||    
T  37324137 attgg 37324141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 31126378 - 31126275
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||| || || |  ||||    ||| ||||||||||| || |||||| ||||||||| | ||||| |||||| ||||||||    
T  31126378 ttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttca 31126279  T
Q  437 ttgg 440  Q
    ||||    
T  31126278 ttgg 31126275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 8769531 - 8769650
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | || | |  ||||||||| ||||| | |||  |||||| || || ||||| | |||||| |||||| ||    
T  8769531 tcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttttttt--aaaaagattcatgggaagttgtaaaaataatttttat 8769628  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||||| || ||||||| ||||    
T  8769629 tggctaatgattatggagaaaa 8769650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 450
Target Start/End: Original strand, 23209238 - 23209344
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||| ||||| ||  |||||||| | ||||||| | |||||||  |||||| ||||||||||| |||||  ||||| |||||| ||||| ||    
T  23209238 ttattaagaaaattaaaatattgtagtttgtgatatagtttctcgtgttattcttgaaataagttttatagaaagatgaaaaaataatttttattggtta 23209337  T
Q  444 ttggtta 450  Q
    || ||||    
T  23209338 ttagtta 23209344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 459
Target Start/End: Original strand, 20847265 - 20847341
Alignment:
Q  383 tttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||||||| |||||| || |||||| |||||||||| |  ||||||||||||||||  |||| ||||||| ||||    
T  20847265 tttttgtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattatggagaaaa 20847341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 6752764 - 6752721
Alignment:
Q  416 aagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  6752764 aagatgtaaaaacaattttaattggctattggttatggagaaaa 6752721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 46557122 - 46557219
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttc 435  Q
    ||||| ||||||||||||||||| ||||| | ||| || ||||||||| ||||||| |||||  || |||||| || ||||||| |||||| |||||||    
T  46557122 tcacatttattaagaaaactaaagcataagaattt-tatcatagtttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattttc 46557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 459
Target Start/End: Original strand, 46557236 - 46557274
Alignment:
Q  421 ataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  46557236 ataaaaataattttcattggctattagttatggaaaaaa 46557274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 34105697 - 34105608
Alignment:
Q  343 cttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatt 432  Q
    |||||||||||||| |||||||| ||||||     |||||||||||| ||||  ||| || ||||||||| | ||||| |||||||||||    
T  34105697 cttattaagaaaacaaaaacatagtagtttaaggtatagttttttgttttattcttgtaataagttttatggaaagatgtaaaaacaatt 34105608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 453
Target Start/End: Original strand, 8764631 - 8764744
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||| ||||||||||||||| | || | |  |||| |||||||||| | ||| ||||||  || || ||||| | |||||| |||||| ||    
T  8764631 tcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgttttttttaaaaaaa--ttcatgggaagttgtaaaaataatttttat 8764728  T
Q  438 tggctattggttatgg 453  Q
    |||||| || ||||||    
T  8764729 tggctaatgattatgg 8764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 3336 - 3234
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||    
T  3336 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccat 3237  T
Q  438 tgg 440  Q
    |||    
T  3236 tgg 3234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 78125 - 78004
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  78125 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcat 78026  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  78025 tggccattggttatggaaaaaa 78004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 3201494 - 3201373
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  3201494 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 3201395  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  3201394 tggctattggttatggaaaaaa 3201373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 6110191 - 6110312
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  |||| |||||||||| |||| | |||||||||||||||||||| ||||||||||||||||    
T  6110191 tcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcat 6110290  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  6110291 tggctattggttatggaaaaaa 6110312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 19264268 - 19264147
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||  |  ||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  19264268 tcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 19264169  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  19264168 tggctattggttatggaaaaaa 19264147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 340 - 459
Target Start/End: Original strand, 28599142 - 28599261
Alignment:
Q  340 acacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| |||||| ||||||||||||| |||||| |||||||||||    
T  28599142 acacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattg 28599241  T
Q  440 gctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||    
T  28599242 gctattggttatggaaaaaa 28599261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 32010271 - 32010168
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  32010271 ttcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttca 32010172  T
Q  437 ttgg 440  Q
    ||||    
T  32010171 ttgg 32010168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 340 - 440
Target Start/End: Complemental strand, 32273841 - 32273737
Alignment:
Q  340 acacttattaagaaaactaaaacataatagt----ttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttc 435  Q
    |||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32273841 acacttattaagaaaactaaaacatagtagtcaatttgtaacatagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttc 32273742  T
Q  436 attgg 440  Q
    |||||    
T  32273741 attgg 32273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 45660536 - 45660412
Alignment:
Q  338 tcacacttattaagaaaactaaaacataa---tagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    ||||| |||||||||||||||||||||||   || |||| |  ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  45660536 tcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 45660437  T
Q  435 cattggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||| ||||    
T  45660436 cattggctattggttatggagaaaa 45660412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 8701770 - 8701649
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||| |||||||||||||||||||||||| | |||||| ||||||||||| |||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  8701770 tcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 8701671  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  8701670 tggctattggttatggaaaaaa 8701649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 35517291 - 35517170
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||||| |||||| ||||||||||||||  |||| |||||| |||||||||    
T  35517291 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcat 35517192  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  35517191 tggctattggttatggaaaaaa 35517170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 45085425 - 45085304
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  |||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  45085425 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 45085326  T
Q  438 tggctattggttatggaaaaaa 459  Q
    | || |||||||||||||||||    
T  45085325 tagccattggttatggaaaaaa 45085304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 25572213 - 25572093
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  25572213 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25572114  T
Q  438 tggctattggttatggaaaaa 458  Q
    ||| |||||||||||||||||    
T  25572113 tggatattggttatggaaaaa 25572093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 344 - 440
Target Start/End: Complemental strand, 38071157 - 38071061
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  38071157 ttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattgg 38071061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 26998485 - 26998383
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  26998485 tcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcat 26998386  T
Q  438 tgg 440  Q
    |||    
T  26998385 tgg 26998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 11617192 - 11617079
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  ||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||||    
T  11617192 tcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11617093  T
Q  438 tggctattggttat 451  Q
    ||||||||||||||    
T  11617092 tggctattggttat 11617079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 338 - 440
Target Start/End: Original strand, 4891630 - 4891733
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  4891630 tcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttta 4891729  T
Q  437 ttgg 440  Q
    ||||    
T  4891730 ttgg 4891733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 12938410 - 12938289
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||||||||||||| | ||||||||| ||||||||||||||  | ||||||||||||||||    
T  12938410 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcat 12938311  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||| ||||||| ||||    
T  12938310 tggctattgattatggagaaaa 12938289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 29524033 - 29524154
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||| |||||||||| ||||| | |||||| |||| ||||||||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  29524033 tcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 29524132  T
Q  438 tggctattggttatggaaaaaa 459  Q
    |||| |||||||||||||||||    
T  29524133 tggcaattggttatggaaaaaa 29524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 41528425 - 41528303
Alignment:
Q  338 tcacacttattaagaaaactaaaa-cataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||| ||||| ||||| | |||| |  ||||||||||||||| |||||||||    |||||||||||||| |||||||||||||||    
T  41528425 tcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttca 41528326  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||||||    
T  41528325 ttggctattggttatggaaaaaa 41528303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 14874091 - 14874010
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  14874091 atagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggagaaaa 14874010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 40808712 - 40808832
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || ||||||| ||||||||||||||||    
T  40808712 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcat 40808810  T
Q  438 tggctattggttatggaaaaaa 459  Q
    | || |||||||| ||||||||    
T  40808811 tagcaattggttagggaaaaaa 40808832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 339 - 459
Target Start/End: Original strand, 33198624 - 33198744
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcatt 438  Q
    ||||||||||||||||||||||| |||| | |||| |   |||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| |||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  439 ggctattggttatggaaaaaa 459  Q
    || ||||||||||||| ||||    
T  33198724 ggttattggttatggagaaaa 33198744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 338 - 451
Target Start/End: Complemental strand, 28858480 - 28858364
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaaca---tagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaatttt 434  Q
    |||||| |||||||||||||||||||||| | |||  || |   |||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||    
T  28858480 tcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataatttt 28858381  T
Q  435 cattggctattggttat 451  Q
    |||||||||||||||||    
T  28858380 cattggctattggttat 28858364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 6765925 - 6766046
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| |||||||||| | |||| |  |||||||||| |||| || ||| || || |||||||||||||| ||||||||||||| ||    
T  6765925 tcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttat 6766024  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||||||||    
T  6766025 tgactattggttatggaaaaaa 6766046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 43415569 - 43415468
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||| |||||||||||||| |||| | |||| |  ||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcat 43415470  T
Q  438 tg 439  Q
    ||    
T  43415469 tg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 439
Target Start/End: Complemental strand, 44442286 - 44442198
Alignment:
Q  352 aaaactaaaacataatagtttgtaacatagttt-tttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| ||| || ||||||| |||||| ||||||||||||||||||    
T  44442286 aaaactaaaacataatagtttgtaacatagtttatttgtgttatttttaaaataaattttatatgaagatgtaaaaacaattttcattg 44442198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 9864710 - 9864832
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagtttt-ttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||||||||||||||||| | |||| |  |||||||| ||||||| |||||| || |||||| || ||||||  |||||||||||||||    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttca 9864809  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    ||||| |||| ||||||| ||||    
T  9864810 ttggcaattgattatggagaaaa 9864832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 33677651 - 33677530
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||| ||||||| |||||||||||||||| | |||| |  |||||||||| |||| | |||  |  ||||||||||||||||| ||||||||||||||||    
T  33677651 tcacgcttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcat 33677552  T
Q  438 tggctattggttatggaaaaaa 459  Q
    || |||||||||||||| ||||    
T  33677551 tgactattggttatggagaaaa 33677530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 11030928 - 11031030
Alignment:
Q  347 ttaagaaaactaaaacataata---gtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||||| ||||| ||||||   |||||||||||||||| |||| |||||||| ||| ||||||||||| ||||||||||||||||||| ||||| ||    
T  11030928 ttaagaaaattaaaatataatactagtttgtaacatagtttcttgtcttatctttaaaataagttttatagaaagatataaaaacaatttttattggtta 11031027  T
Q  444 ttg 446  Q
    |||    
T  11031028 ttg 11031030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 364 - 451
Target Start/End: Complemental strand, 9709655 - 9709568
Alignment:
Q  364 taatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttat 451  Q
    |||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| | ||||||||||||||| | ||||| ||||    
T  9709655 taatagtttgcaacatagtttcttgtgttatccttgaaacaagttttataggaagatgtgaaaacaattttcatttgttattgattat 9709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 452
Target Start/End: Original strand, 24204521 - 24204635
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| |||| |||||||||||||| ||| | |||| |  ||| ||| ||||||| |||||| || |||||||||||||| || ||||| ||||||||||    
T  24204521 tcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcat 24204620  T
Q  438 tggctattggttatg 452  Q
    |||||||||||||||    
T  24204621 tggctattggttatg 24204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 35115795 - 35115917
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaa-aagttttataggaagatataaaaacaattttca 436  Q
    ||||||||||||||| ||||||||||||| | |||| |  ||||||||||||||| | |||   || ||||||||||| ||||| |||||||||||||||    
T  35115795 tcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttca 35115894  T
Q  437 ttggctattggttatggaaaaaa 459  Q
    || | ||||||||||||| ||||    
T  35115895 tttgttattggttatggagaaaa 35115917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 35023067 - 35022961
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    |||||||||||||||||||||||||||||| | |||| |  ||| ||||||||||| | |||| |  |||||| |||||||||| |||||||||||||||    
T  35023067 ttcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt-tttttggagtaagtttcataggaagatgtaaaaacaattttca 35022969  T
Q  437 ttggctat 444  Q
    || |||||    
T  35022968 tttgctat 35022961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 440
Target Start/End: Complemental strand, 20380256 - 20380189
Alignment:
Q  373 gtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    |||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||  ||||||||    
T  20380256 gtaacatagttttttgtgttatctttgaaataagttttataggaaaatgtaaaaaaaaaattcattgg 20380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 7645219 - 7645340
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||||||||||||||||||||||||||| | |||| |  ||| | ||||||||| || ||  || || ||| || |||| || ||||||||||||||||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcat 7645318  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||  ||||||| ||||    
T  7645319 tggctattaattatggagaaaa 7645340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 433
Target Start/End: Original strand, 33932914 - 33933010
Alignment:
Q  337 ttcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattt 433  Q
    ||||||||||||||||||||||||||||| || ||||||  ||| |||||||| ||||  ||| |  ||||||||||| ||||| |||| |||||||    
T  33932914 ttcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaagttttatagaaagatgtaaacacaattt 33933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 439
Target Start/End: Original strand, 16494972 - 16495019
Alignment:
Q  392 tatctttgaaaaaagttttataggaagatataaaaacaattttcattg 439  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  16494972 tatctttgaaataagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 459
Target Start/End: Original strand, 40584436 - 40584511
Alignment:
Q  384 ttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||| |||||  || ||||||||| ||||||| ||||||||||||||||||| | |||||||||| |||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgggaaaaa 40584511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 452
Target Start/End: Complemental strand, 5963362 - 5963255
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    |||||||||||||||||| |||| | |||  |   || ||||||||||| |||||  || ||||||||| ||| ||| |||||| |||||| ||||||||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggcta 5963264  T
Q  444 ttggttatg 452  Q
    |||||||||    
T  5963263 ttggttatg 5963255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 8032702 - 8032762
Alignment:
Q  380 agttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattgg 440  Q
    ||||||||||||||| ||||    ||||||||||||||||| ||||||||||||| |||||    
T  8032702 agttttttgtgttatttttgtgttaagttttataggaagatgtaaaaacaatttttattgg 8032762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 20386791 - 20386747
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagt 382  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  20386791 tcacacttattaagaaaaccaaaacatagtagttcgtaacatagt 20386747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 431 - 459
Target Start/End: Original strand, 5280592 - 5280620
Alignment:
Q  431 ttttcattggctattggttatggaaaaaa 459  Q
    |||||||||||||||||||||||||||||    
T  5280592 ttttcattggctattggttatggaaaaaa 5280620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 366
Target Start/End: Original strand, 11825351 - 11825379
Alignment:
Q  338 tcacacttattaagaaaactaaaacataa 366  Q
    |||||||||||||||||||||||||||||    
T  11825351 tcacacttattaagaaaactaaaacataa 11825379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 338 - 459
Target Start/End: Original strand, 44764 - 44885
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||||||||||||||||||||| |||| |  ||| ||||||||||| |||||| ||||||||||||||||| ||  |||||||||||||||    
T  44764 tcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcat 44863  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||||||||||||||||||||||    
T  44864 tggctattggttatggaaaaaa 44885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 5868 - 5965
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttc 435  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  5868 tcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttc 5965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 10209 - 10092
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    |||||||||||||| |||||||||| | |||| ||  |||||||||||||| |||||  |||||||||||||||||||| |||||||||||||||||| |    
T  10209 acttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgac 10110  T
Q  442 tattggttatggaaaaaa 459  Q
    ||||||||||||||||||    
T  10109 tattggttatggaaaaaa 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 342 - 459
Target Start/End: Complemental strand, 157958 - 157841
Alignment:
Q  342 acttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggc 441  Q
    ||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||| || |||||| || || |||| ||||||||||||||||||||    
T  157958 acttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggc 157859  T
Q  442 tattggttatggaaaaaa 459  Q
     |||||||||||||||||    
T  157858 aattggttatggaaaaaa 157841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 344 - 459
Target Start/End: Complemental strand, 155022 - 154908
Alignment:
Q  344 ttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 443  Q
    ||||||||||||||||||||||| | | || || ||||||||| || || ||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  155022 ttattaagaaaactaaaacataagaatctgaaatatagttttt-gtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggcta 154924  T
Q  444 ttggttatggaaaaaa 459  Q
    ||||||||||||||||    
T  154923 ttggttatggaaaaaa 154908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 451
Target Start/End: Original strand, 160912 - 161025
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||| |||||| |||||| |||| ||| | ||||||||||||||||    
T  160912 tcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcat 161011  T
Q  438 tggctattggttat 451  Q
    ||| |||| |||||    
T  161012 tggttatttgttat 161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 3461 - 3542
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||||| |||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  3461 atagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggaaaaaa 3542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 1180 - 1059
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||  |||||||||| |||| | |||| |  ||||||||||||||| | ||| ||||||||||||||| ||||| |||||||| |||||||    
T  1180 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 1081  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||  ||||||||||||||||||    
T  1080 tgagtattggttatggaaaaaa 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 338 - 459
Target Start/End: Complemental strand, 9140 - 9019
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcat 437  Q
    ||||| ||||||  |||||||||| |||| | |||| |  ||||||||||||||| | ||| ||||||||||||||| ||||| |||||||| |||||||    
T  9140 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 9041  T
Q  438 tggctattggttatggaaaaaa 459  Q
    ||  ||||||||||||||||||    
T  9040 tgagtattggttatggaaaaaa 9019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 40307 - 40226
Alignment:
Q  378 atagttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||| |||||||||| |||||| || || |||||||| ||| | |||||||||||||||||||||||||||||| |||||||    
T  40307 atagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttatagaaaaaa 40226  T

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Target: scaffold1786 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 959 - 894
Alignment:
Q  394 tctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    |||||| || ||||||||||| |||||||||||| ||||||||||| |||||||||||||| ||||    
T  959 tctttggaataagttttatagaaagatataaaaataattttcattgactattggttatggagaaaa 894  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 459
Target Start/End: Complemental strand, 160376 - 160297
Alignment:
Q  380 agttttttgtgttatctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggttatggaaaaaa 459  Q
    ||||||||||||| |||||| || ||  || || ||||||| ||||| || ||||||||||||||||||||||| |||||    
T  160376 agttttttgtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgggaaaaa 160297  T

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Target: scaffold0073 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 376
Target Start/End: Complemental strand, 17971 - 17934
Alignment:
Q  339 cacacttattaagaaaactaaaacataatagtttgtaa 376  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  17971 cacacttattaagaaaactaaaacatagtagtttgtaa 17934  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 444
Target Start/End: Original strand, 233480 - 233586
Alignment:
Q  338 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtg-ttatctttgaaaaaagttttataggaagatataaaaacaattttca 436  Q
    ||||| |||||||||||||||||| |||| | |||   | |||||| |||||| || ||||| ||| |||||| || ||||||| ||||||| |||||||    
T  233480 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaac-attttca 233578  T
Q  437 ttggctat 444  Q
    ||||||||    
T  233579 ttggctat 233586  T

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