View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2652_high_42 (Length: 250)
Name: NF2652_high_42
Description: NF2652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2652_high_42 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 13453530 - 13453768
Alignment:
| Q |
12 |
tatactttgcggtgtgttttataatgattaatcctcgtaataataaaaataatatatttgtaataaatgatgagattaaaacccttatattaatatcgtt |
111 |
Q |
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| T |
13453530 |
tatactttgcggtgtgttttataatgattaatcctcgtaataataaaaataatatatttgtaataaatgatgagattaaacccctcatattaatctcgtt |
13453629 |
T |
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| Q |
112 |
cttttgtttggatactgagttttagaaagatagaagtaatttgtaatggtggctagtttttaaacaaatcaagaaaataattgtaaaataattgatcttg |
211 |
Q |
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| T |
13453630 |
ctttggtttggataccgagttttagaaagatagaagtaatttgtaatgatggctagttttcaaacaaatcaagaaaatagttgtaaaataattgatcttg |
13453729 |
T |
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| Q |
212 |
atggaccaacaagattggttggatcggagagcaacgctt |
250 |
Q |
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| T |
13453730 |
atggaccaagaagattggttggatcggagagcaacgctt |
13453768 |
T |
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