View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2652_low_36 (Length: 329)
Name: NF2652_low_36
Description: NF2652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2652_low_36 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 10366989 - 10367317
Alignment:
| Q |
1 |
taatttagtttaattttccatttttatttctagttttcttgcttgtacaccacttttgaataggtactataaataatannnnnnngagaaatgaaagtat |
100 |
Q |
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| T |
10366989 |
taatttagtttaattttccatttttatttctagttttcttgcttgtacaccacttttgaataggtactataaataatatttttttgagaaatgaaagtat |
10367088 |
T |
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| Q |
101 |
ataattatgatttctgttgactgatattgatagtttgagtttcaatgtgtcaaaatgtagtgtcatgattcaggaatgccactagagatgggaaagaata |
200 |
Q |
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| T |
10367089 |
ataattatgatttctgttgactgatattgatagtttgagtttcaatgtgtcaaaatgtagtgtcaggattcaggaatgccactagagatgggaaagaata |
10367188 |
T |
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| Q |
201 |
aacaacctacagaatcaagtgttcgtgaccccgaaaaaagagaagaaacctctcttgaatgtttttccccgtttggctttgggatgaaggagtggttttg |
300 |
Q |
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| T |
10367189 |
aacaacctacggaatcaagtgttcgtgaccctgaaaaaagagaagaaacttctgttaaatgtttttccccgtttggcttcggggtgaaggagtggttttg |
10367288 |
T |
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| Q |
301 |
gaagaggcaacacaacccaaagaaatgta |
329 |
Q |
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| T |
10367289 |
gaagaggcaacacaacccaaagaaatgta |
10367317 |
T |
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