View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2652_low_43 (Length: 269)
Name: NF2652_low_43
Description: NF2652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2652_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 610335 - 610095
Alignment:
| Q |
19 |
ttaccttcatgtcatgattctcaccttgttgagtcaaggtttcataatattcgtttaccttccccaaaaccactcaccactcaacccattgatttacctt |
118 |
Q |
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| T |
610335 |
ttaccttcatgtcatgattctcaccttgttgagtcaaggtttcataatattcgtttaccttccccaaaaccactcaccactcaacccattgatttacctt |
610236 |
T |
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| Q |
119 |
tcaagacttgtttttgggatttcgaaaacaacattaataaaactgaaactgttgattctaatcccaaagaagatagttggagttccattcaatcactttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
610235 |
tcaagacttgtttttgggatttcgaaaacaacattaataaaactataactgttgattctaatcccaaagaagatagctggagttccattcaatcactttt |
610136 |
T |
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| Q |
219 |
caaatccaatgcttctaaaggccttaaagaaactacctatg |
259 |
Q |
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| T |
610135 |
caaatccaatgcttctaaaggccttaaagaaactacctatg |
610095 |
T |
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