View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2652_low_54 (Length: 235)
Name: NF2652_low_54
Description: NF2652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2652_low_54 |
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Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 9231566 - 9231762
Alignment:
| Q |
17 |
caatacatattcaaattttaagcaaaccccacaaaccatcactaccatcattacattttcccaccccatgaagctttctctatttgtctcttaaaaacat |
116 |
Q |
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| T |
9231566 |
caatacatattcaaattttaagcaaaccccacaaaccatcactaccatcattacattttcccaccccatgaagctttctctatttgtctcttaaaaacat |
9231665 |
T |
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| Q |
117 |
cattcacctatatagctttctcaaagatccctttcacaaatcactcaaaacaagaaaaaacaaaccctcaaagtgcttcttcataagaactactaaa |
213 |
Q |
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| T |
9231666 |
cattcacctatatagctttctcaaagatctctttcacaaatcactcaaaacaagaaaaaacaaaccctcaaagtgcttcttcataagaactactaaa |
9231762 |
T |
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