View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2653_high_17 (Length: 295)
Name: NF2653_high_17
Description: NF2653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2653_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 34105455 - 34105179
Alignment:
| Q |
1 |
ggaaaagacatcacagtttcttcaatctatttcatgtcacactaatgattgatcaagcacatacaatttcatgtttttacacaatagtagtatcaactaa |
100 |
Q |
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| T |
34105455 |
ggaaaagacatcacagtttcttcaatctatttcatgtcacactaatgattgatcaagcacatacaatttcatgtttttacacaatagtagtatcaactaa |
34105356 |
T |
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| Q |
101 |
acagaaatgtaaactaattagttctatcaacttagtaacttgaaatataagttaaatattggagctcaatgtttgttgtgatgatgtgatcccccgcacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
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| T |
34105355 |
acagaaatgtaaactaattagttctatcaacttagtaacttgaaatataagttaaatattggagctcaatgtttgttgtgatggtgtgatctcccgcacc |
34105256 |
T |
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| Q |
201 |
caaatgggagaataacctctaaaacagtcgaaaggctacatctacatcaaagagtataatataatacagacggtatt |
277 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34105255 |
cagatgggagaataacctctaaaacagtcgaaaggctacatctacatcaaagagtataatataatacagacggtatt |
34105179 |
T |
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